Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:29:24 (80375): wrapper (7.7.26015): starting
13:29:24 (80375): wrapper: running run_atlas (--nthreads 8)
[2024-11-02 13:29:24] Arguments: --nthreads 8
[2024-11-02 13:29:24] Threads: 8
[2024-11-02 13:29:24] Checking for CVMFS
[2024-11-02 13:29:24] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-02 13:29:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-02 13:29:24] Running cvmfs_config stat atlas.cern.ch
[2024-11-02 13:29:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-02 13:29:25] 2.11.2.0 294477 4621 244776 139028 2 93 15199498 18432000 13939 130560 4 45691948 99.428 64791869 39249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-11-02 13:29:25] CVMFS is ok
[2024-11-02 13:29:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-11-02 13:29:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-11-02 13:29:25] Further information can be found at the LHC@home message board.
[2024-11-02 13:29:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-02 13:29:25] Checking for apptainer binary...
[2024-11-02 13:29:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-11-02 13:29:25] Running /usr/bin/apptainer --version
[2024-11-02 13:29:25] apptainer version 1.3.2-1.el7
[2024-11-02 13:29:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-02 13:29:25] c-211-35-1.aglt2.org
[2024-11-02 13:29:25] apptainer works
[2024-11-02 13:29:25] Set ATHENA_PROC_NUMBER=8
[2024-11-02 13:29:25] Set ATHENA_CORE_NUMBER=8
[2024-11-02 13:29:26] Starting ATLAS job with PandaID=6387757300
[2024-11-02 13:29:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-02 14:33:35]  *** The last 200 lines of the pilot log: ***
[2024-11-02 14:33:35]  domain=
[2024-11-02 14:33:35]  filesize=1186281
[2024-11-02 14:33:35]  filetype=log
[2024-11-02 14:33:35]  guid=a64f2c44-6c04-4925-891b-5e905b494a16
[2024-11-02 14:33:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-11-02 14:33:35]  is_altstaged=None
[2024-11-02 14:33:35]  is_tar=False
[2024-11-02 14:33:35]  lfn=log.41843716._015959.job.log.tgz.1
[2024-11-02 14:33:35]  mtime=0
[2024-11-02 14:33:35]  protocol_id=None
[2024-11-02 14:33:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-11-02 14:33:35]  replicas=None
[2024-11-02 14:33:35]  scope=mc16_13TeV
[2024-11-02 14:33:35]  status=None
[2024-11-02 14:33:35]  status_code=0
[2024-11-02 14:33:35]  storage_token=
[2024-11-02 14:33:35]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6387757300/log.41843716._015959.job.log.tgz.1
[2024-11-02 14:33:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e6/d5/log.41843716._015959.job.log.tgz.1
[2024-11-02 14:33:35]  workdir=None
[2024-11-02 14:33:35] ]
[2024-11-02 14:33:35] 2024-11-02 18:33:08,875 | INFO     | transferring file log.41843716._015959.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6387757300/log.41843716._015959.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-11-02 14:33:35] 2024-11-02 18:33:08,876 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6387757300/log.41843716._015959.job.log.tgz.1 /tmp/boinchome/slots/2/log.41843716._015959.job
[2024-11-02 14:33:35] 2024-11-02 18:33:08,894 | INFO     | adding to output.list: log.41843716._015959.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e6/d5/log.41843716._015959.job.log.tgz.
[2024-11-02 14:33:35] 2024-11-02 18:33:08,895 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-11-02 14:33:35] 2024-11-02 18:33:08,895 | INFO     | summary of transferred files:
[2024-11-02 14:33:35] 2024-11-02 18:33:08,895 | INFO     |  -- lfn=log.41843716._015959.job.log.tgz.1, status_code=0, status=transferred
[2024-11-02 14:33:35] 2024-11-02 18:33:08,896 | INFO     | stage-out finished correctly
[2024-11-02 14:33:35] 2024-11-02 18:33:10,145 | INFO     | monitor loop #298: job 0:6387757300 is in state 'finished'
[2024-11-02 14:33:35] 2024-11-02 18:33:10,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-02 14:33:35] 2024-11-02 18:33:11,695 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-11-02 14:33:35] 2024-11-02 18:33:11,789 | INFO     | job 6387757300 has state=finished
[2024-11-02 14:33:35] 2024-11-02 18:33:11,789 | INFO     | preparing for final server update for job 6387757300 in state='finished'
[2024-11-02 14:33:35] 2024-11-02 18:33:11,790 | INFO     | this job has now completed (state=finished)
[2024-11-02 14:33:35] 2024-11-02 18:33:11,790 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-11-02 14:33:35] 2024-11-02 18:33:11,790 | INFO     | log transfer has been attempted: DONE
[2024-11-02 14:33:35] 2024-11-02 18:33:11,790 | INFO     | job 6387757300 has finished - writing final server update
[2024-11-02 14:33:35] 2024-11-02 18:33:11,791 | INFO     | total number of processed events: 50 (read)
[2024-11-02 14:33:35] 2024-11-02 18:33:11,798 | INFO     | executing command: lscpu
[2024-11-02 14:33:35] 2024-11-02 18:33:11,865 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-11-02 14:33:35] 2024-11-02 18:33:11,897 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-11-02 14:33:35] 2024-11-02 18:33:12,648 | INFO     | monitor loop #299: job 0:6387757300 is in state 'finished'
[2024-11-02 14:33:35] 2024-11-02 18:33:12,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-02 14:33:35] 2024-11-02 18:33:14,840 | INFO     | CPU arch script returned: x86-64-v4
[2024-11-02 14:33:35] 2024-11-02 18:33:14,840 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6387757300/memory_monitor_summary.json (trf name=prmon)
[2024-11-02 14:33:35] 2024-11-02 18:33:14,842 | INFO     | extracted standard info from prmon json
[2024-11-02 14:33:35] 2024-11-02 18:33:14,842 | INFO     | extracted standard memory fields from prmon json
[2024-11-02 14:33:35] 2024-11-02 18:33:14,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-02 14:33:35] 2024-11-02 18:33:14,845 | INFO     | fitting pss+swap vs Time
[2024-11-02 14:33:35] 2024-11-02 18:33:14,845 | INFO     | model: linear, x: [1730568902.0, 1730568963.0, 1730569024.0, 1730569085.0, 1730569146.0, 1730569207.0, 1730569268.0, 1730569329.0, 1730569390.0, 1730569451.0, 1730
[2024-11-02 14:33:35] 2024-11-02 18:33:14,845 | INFO     | sum of square deviations: 54438230.0
[2024-11-02 14:33:35] 2024-11-02 18:33:14,846 | INFO     | sum of deviations: 21840895060.000004
[2024-11-02 14:33:35] 2024-11-02 18:33:14,846 | INFO     | mean x: 1730570579.5
[2024-11-02 14:33:35] 2024-11-02 18:33:14,846 | INFO     | mean y: 1604300.142857143
[2024-11-02 14:33:35] 2024-11-02 18:33:14,846 | INFO     | -- intersect: -694312123768.953
[2024-11-02 14:33:35] 2024-11-02 18:33:14,846 | INFO     | intersect: -694312123768.953
[2024-11-02 14:33:35] 2024-11-02 18:33:14,846 | INFO     | chi2: 8.290120170770885
[2024-11-02 14:33:35] 2024-11-02 18:33:14,847 | INFO     | -- intersect: -694312123768.953
[2024-11-02 14:33:35] 2024-11-02 18:33:14,847 | INFO     | current memory leak: 401.21 B/s (using 56 data points, chi2=8.29)
[2024-11-02 14:33:35] 2024-11-02 18:33:14,847 | INFO     | ..............................
[2024-11-02 14:33:35] 2024-11-02 18:33:14,847 | INFO     | . Timing measurements:
[2024-11-02 14:33:35] 2024-11-02 18:33:14,847 | INFO     | . get job = 0 s
[2024-11-02 14:33:35] 2024-11-02 18:33:14,848 | INFO     | . initial setup = 2 s
[2024-11-02 14:33:35] 2024-11-02 18:33:14,848 | INFO     | . payload setup = 4 s
[2024-11-02 14:33:35] 2024-11-02 18:33:14,848 | INFO     | . stage-in = 0 s
[2024-11-02 14:33:35] 2024-11-02 18:33:14,848 | INFO     | . payload execution = 3790 s
[2024-11-02 14:33:35] 2024-11-02 18:33:14,848 | INFO     | . stage-out = 0 s
[2024-11-02 14:33:35] 2024-11-02 18:33:14,848 | INFO     | . log creation = 0 s
[2024-11-02 14:33:35] 2024-11-02 18:33:14,848 | INFO     | ..............................
[2024-11-02 14:33:35] 2024-11-02 18:33:14,941 | INFO     | 
[2024-11-02 14:33:35] 2024-11-02 18:33:14,941 | INFO     | job summary report
[2024-11-02 14:33:35] 2024-11-02 18:33:14,941 | INFO     | --------------------------------------------------
[2024-11-02 14:33:35] 2024-11-02 18:33:14,941 | INFO     | PanDA job id: 6387757300
[2024-11-02 14:33:35] 2024-11-02 18:33:14,941 | INFO     | task id: 41843716
[2024-11-02 14:33:35] 2024-11-02 18:33:14,941 | INFO     | errors: (none)
[2024-11-02 14:33:35] 2024-11-02 18:33:14,941 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-02 14:33:35] 2024-11-02 18:33:14,941 | INFO     | pilot state: finished 
[2024-11-02 14:33:35] 2024-11-02 18:33:14,941 | INFO     | transexitcode: 0
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | exeerrorcode: 0
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | exeerrordiag: 
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | exitcode: 0
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | exitmsg: OK
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | cpuconsumptiontime: 11769 s
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | nevents: 50
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | neventsw: 0
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | pid: 97431
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | pgrp: 97431
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | corecount: 8
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | event service: False
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | sizes: {0: 2413244, 3: 2413450, 11: 2413478, 3798: 2439999, 3799: 2449074, 3802: 2449074, 3805: 2449424}
[2024-11-02 14:33:35] 2024-11-02 18:33:14,942 | INFO     | --------------------------------------------------
[2024-11-02 14:33:35] 2024-11-02 18:33:14,943 | INFO     | 
[2024-11-02 14:33:35] 2024-11-02 18:33:14,943 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-11-02 14:33:35] 2024-11-02 18:33:14,965 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,966 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,967 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-02 14:33:35] 2024-11-02 18:33:14,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,967 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-02 14:33:35] 2024-11-02 18:33:14,967 | INFO     | job 6387757300 has completed (purged errors)
[2024-11-02 14:33:35] 2024-11-02 18:33:14,967 | INFO     | overall cleanup function is called
[2024-11-02 14:33:35] 2024-11-02 18:33:15,980 | INFO     | --- collectZombieJob: --- 10, [97431]
[2024-11-02 14:33:35] 2024-11-02 18:33:15,980 | INFO     | zombie collector waiting for pid 97431
[2024-11-02 14:33:35] 2024-11-02 18:33:15,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-02 14:33:35] 2024-11-02 18:33:15,981 | INFO     | collected zombie processes
[2024-11-02 14:33:35] 2024-11-02 18:33:15,981 | INFO     | will attempt to kill all subprocesses of pid=97431
[2024-11-02 14:33:35] 2024-11-02 18:33:16,189 | INFO     | process IDs to be killed: [97431] (in reverse order)
[2024-11-02 14:33:35] 2024-11-02 18:33:16,316 | WARNING  | found no corresponding commands to process id(s)
[2024-11-02 14:33:35] 2024-11-02 18:33:16,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-02 14:33:35] 2024-11-02 18:33:16,323 | INFO     | did not find any defunct processes belonging to 97431
[2024-11-02 14:33:35] 2024-11-02 18:33:16,329 | INFO     | did not find any defunct processes belonging to 97431
[2024-11-02 14:33:35] 2024-11-02 18:33:16,329 | INFO     | ready for new job
[2024-11-02 14:33:35] 2024-11-02 18:33:16,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-02 14:33:35] 2024-11-02 18:33:16,330 | INFO     | **************************************
[2024-11-02 14:33:35] 2024-11-02 18:33:16,330 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-02 14:33:35] 2024-11-02 18:33:16,330 | INFO     | **************************************
[2024-11-02 14:33:35] 2024-11-02 18:33:16,331 | INFO     | 
[2024-11-02 14:33:35] 2024-11-02 18:33:16,334 | INFO     | architecture information:
[2024-11-02 14:33:35] 2024-11-02 18:33:16,334 | INFO     | executing command: cat /etc/os-release
[2024-11-02 14:33:35] 2024-11-02 18:33:16,352 | INFO     | cat /etc/os-release:
[2024-11-02 14:33:35] NAME="CentOS Linux"
[2024-11-02 14:33:35] VERSION="7 (Core)"
[2024-11-02 14:33:35] ID="centos"
[2024-11-02 14:33:35] ID_LIKE="rhel fedora"
[2024-11-02 14:33:35] VERSION_ID="7"
[2024-11-02 14:33:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-02 14:33:35] ANSI_COLOR="0;31"
[2024-11-02 14:33:35] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-02 14:33:35] HOME_URL="https://www.centos.org/"
[2024-11-02 14:33:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-02 14:33:35] 
[2024-11-02 14:33:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-02 14:33:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-02 14:33:35] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-02 14:33:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-02 14:33:35] 
[2024-11-02 14:33:35] 2024-11-02 18:33:16,352 | INFO     | **************************************
[2024-11-02 14:33:35] 2024-11-02 18:33:16,855 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-11-02 14:33:35] 2024-11-02 18:33:16,876 | INFO     | sufficient remaining disk space (102294880256 B)
[2024-11-02 14:33:35] 2024-11-02 18:33:16,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-02 14:33:35] 2024-11-02 18:33:16,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-02 14:33:35] 2024-11-02 18:33:16,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-02 14:33:35] 2024-11-02 18:33:16,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-02 14:33:35] 2024-11-02 18:33:16,878 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-11-02 14:33:35] 2024-11-02 18:33:16,878 | INFO     | aborting loop
[2024-11-02 14:33:35] 2024-11-02 18:33:16,879 | INFO     | found 0 job(s) in 20 queues
[2024-11-02 14:33:35] 2024-11-02 18:33:16,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-02 14:33:35] 2024-11-02 18:33:16,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-02 14:33:35] 2024-11-02 18:33:16,893 | INFO     | all job control threads have been joined
[2024-11-02 14:33:35] 2024-11-02 18:33:16,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-02 14:33:35] 2024-11-02 18:33:17,080 | INFO     | all payload control threads have been joined
[2024-11-02 14:33:35] 2024-11-02 18:33:17,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-02 14:33:35] 2024-11-02 18:33:17,860 | INFO     | all data control threads have been joined
[2024-11-02 14:33:35] 2024-11-02 18:33:17,882 | INFO     | [job] retrieve thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:17,883 | INFO     | [job] queue monitor thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:17,884 | INFO     | [job] job monitor thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:17,898 | INFO     | [job] control thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:18,085 | INFO     | [payload] control thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:18,109 | INFO     | [payload] validate_pre thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:18,131 | INFO     | [job] validate thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:18,164 | INFO     | [job] create_data_payload thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:18,393 | INFO     | [payload] failed_post thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:18,685 | INFO     | [data] copytool_in thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:18,866 | INFO     | [data] control thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:18,919 | INFO     | [payload] validate_post thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:19,004 | INFO     | [data] copytool_out thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:19,310 | INFO     | [payload] execute_payloads thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:21,801 | INFO     | [data] queue_monitor thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:27,480 | INFO     | job.realtimelogging is not enabled
[2024-11-02 14:33:35] 2024-11-02 18:33:28,485 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-02 14:33:35] 2024-11-02 18:33:29,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140286981003072)>', '<ExcThread(monitor, started 140286667757312)>']
[2024-11-02 14:33:35] 2024-11-02 18:33:29,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-02 14:33:35] 2024-11-02 18:33:29,948 | INFO     | [monitor] control thread has ended
[2024-11-02 14:33:35] 2024-11-02 18:33:34,874 | INFO     | all workflow threads have been joined
[2024-11-02 14:33:35] 2024-11-02 18:33:34,874 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-02 14:33:35] 2024-11-02 18:33:34,874 | INFO     | traces error code: 0
[2024-11-02 14:33:35] 2024-11-02 18:33:34,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-02 14:33:35] 2024-11-02 18:33:34,985 [wrapper] ==== pilot stdout END ====
[2024-11-02 14:33:35] 2024-11-02 18:33:34,988 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-02 14:33:35] 2024-11-02 18:33:34,992 [wrapper] pilotpid: 84466
[2024-11-02 14:33:35] 2024-11-02 18:33:34,995 [wrapper] Pilot exit status: 0
[2024-11-02 14:33:35] 2024-11-02 18:33:35,007 [wrapper] pandaids: 6387757300
[2024-11-02 14:33:35] 2024-11-02 18:33:35,074 [wrapper] cleanup supervisor_pilot  34681 84467
[2024-11-02 14:33:35] 2024-11-02 18:33:35,077 [wrapper] Test setup, not cleaning
[2024-11-02 14:33:35] 2024-11-02 18:33:35,080 [wrapper] ==== wrapper stdout END ====
[2024-11-02 14:33:35] 2024-11-02 18:33:35,083 [wrapper] ==== wrapper stderr END ====
[2024-11-02 14:33:35] 2024-11-02 18:33:35,089 [wrapper] apfmon messages muted
[2024-11-02 14:33:35]  *** Error codes and diagnostics ***
[2024-11-02 14:33:35]     "exeErrorCode": 0,
[2024-11-02 14:33:35]     "exeErrorDiag": "",
[2024-11-02 14:33:35]     "pilotErrorCode": 0,
[2024-11-02 14:33:35]     "pilotErrorDiag": "",
[2024-11-02 14:33:35]  *** Listing of results directory ***
[2024-11-02 14:33:35] total 429904
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas    486088 Nov  2 12:57 pilot3.tar.gz
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas      5652 Nov  2 13:07 queuedata.json
[2024-11-02 14:33:35] -rwx------ 1 boincer umatlas     34589 Nov  2 13:09 runpilot2-wrapper.sh
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas       100 Nov  2 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-02 14:33:35] -rwxr-xr-x 1 boincer umatlas      7986 Nov  2 13:29 run_atlas
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas       105 Nov  2 13:29 job.xml
[2024-11-02 14:33:35] -rw-r--r-- 2 boincer umatlas 381847104 Nov  2 13:29 EVNT.41780292._000022.pool.root.1
[2024-11-02 14:33:35] -rw-r--r-- 2 boincer umatlas     17569 Nov  2 13:29 start_atlas.sh
[2024-11-02 14:33:35] drwxrwx--x 2 boincer umatlas      4096 Nov  2 13:29 shared
[2024-11-02 14:33:35] -rw-r--r-- 2 boincer umatlas    499924 Nov  2 13:29 input.tar.gz
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas         0 Nov  2 13:29 boinc_lockfile
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas      2899 Nov  2 13:29 pandaJob.out
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas       467 Nov  2 13:29 setup.sh.local
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas   1029671 Nov  2 13:29 agis_schedconf.cvmfs.json
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas   1602446 Nov  2 13:29 agis_ddmendpoints.agis.ALL.json
[2024-11-02 14:33:35] drwx------ 4 boincer umatlas      4096 Nov  2 13:29 pilot3
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas       530 Nov  2 14:23 boinc_task_state.xml
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas      6385 Nov  2 14:31 init_data.xml
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas        95 Nov  2 14:32 pilot_heartbeat.json
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas  51364813 Nov  2 14:32 HITS.41843716._015959.pool.root.1
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas      1056 Nov  2 14:33 memory_monitor_summary.json
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas   1186281 Nov  2 14:33 log.41843716._015959.job.log.tgz.1
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas      8586 Nov  2 14:33 heartbeat.json
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas      8192 Nov  2 14:33 boinc_mmap_file
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas        27 Nov  2 14:33 wrapper_checkpoint.txt
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas      4411 Nov  2 14:33 pilotlog.txt
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas    384623 Nov  2 14:33 log.41843716._015959.job.log.1
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas       353 Nov  2 14:33 output.list
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas       620 Nov  2 14:33 runtime_log
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas   1587200 Nov  2 14:33 result.tar.gz
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas     11428 Nov  2 14:33 runtime_log.err
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas       658 Nov  2 14:33 2MqNDmmnWR6n9Rq4apOajLDm4fhM0noT9bVorHsSDmBNlLDm7zcPmm.diag
[2024-11-02 14:33:35] -rw-r--r-- 1 boincer umatlas     21195 Nov  2 14:33 stderr.txt
[2024-11-02 14:33:35] HITS file was successfully produced:
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas 51364813 Nov  2 14:32 shared/HITS.pool.root.1
[2024-11-02 14:33:35]  *** Contents of shared directory: ***
[2024-11-02 14:33:35] total 425136
[2024-11-02 14:33:35] -rw-r--r-- 2 boincer umatlas 381847104 Nov  2 13:29 ATLAS.root_0
[2024-11-02 14:33:35] -rw-r--r-- 2 boincer umatlas     17569 Nov  2 13:29 start_atlas.sh
[2024-11-02 14:33:35] -rw-r--r-- 2 boincer umatlas    499924 Nov  2 13:29 input.tar.gz
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas  51364813 Nov  2 14:32 HITS.pool.root.1
[2024-11-02 14:33:35] -rw------- 1 boincer umatlas   1587200 Nov  2 14:33 result.tar.gz
14:33:37 (80375): run_atlas exited; CPU time 11707.272472
14:33:37 (80375): called boinc_finish(0)

</stderr_txt>
]]>

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