Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:38:04 (289623): wrapper (7.7.26015): starting
11:38:04 (289623): wrapper: running run_atlas (--nthreads 8)
[2024-11-02 11:38:04] Arguments: --nthreads 8
[2024-11-02 11:38:04] Threads: 8
[2024-11-02 11:38:04] Checking for CVMFS
[2024-11-02 11:38:04] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-02 11:38:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-02 11:38:04] Running cvmfs_config stat atlas.cern.ch
[2024-11-02 11:38:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-02 11:38:05] 2.11.2.0 294477 4509 238924 139025 1 94 15066978 18432001 10453 130560 4 44225733 99.410 64732693 39232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-11-02 11:38:05] CVMFS is ok
[2024-11-02 11:38:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-11-02 11:38:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-11-02 11:38:05] Further information can be found at the LHC@home message board.
[2024-11-02 11:38:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-02 11:38:05] Checking for apptainer binary...
[2024-11-02 11:38:05] Using apptainer found in PATH at /usr/bin/apptainer
[2024-11-02 11:38:05] Running /usr/bin/apptainer --version
[2024-11-02 11:38:05] apptainer version 1.3.2-1.el7
[2024-11-02 11:38:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-02 11:38:05] c-211-35-1.aglt2.org
[2024-11-02 11:38:05] apptainer works
[2024-11-02 11:38:05] Set ATHENA_PROC_NUMBER=8
[2024-11-02 11:38:05] Set ATHENA_CORE_NUMBER=8
[2024-11-02 11:38:05] Starting ATLAS job with PandaID=6387694240
[2024-11-02 11:38:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-02 12:31:04]  *** The last 200 lines of the pilot log: ***
[2024-11-02 12:31:04]  filesize=1176376
[2024-11-02 12:31:04]  filetype=log
[2024-11-02 12:31:04]  guid=e0de540a-26a6-424a-b35f-745be1977ad8
[2024-11-02 12:31:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-11-02 12:31:04]  is_altstaged=None
[2024-11-02 12:31:04]  is_tar=False
[2024-11-02 12:31:04]  lfn=log.41844014._002823.job.log.tgz.1
[2024-11-02 12:31:04]  mtime=0
[2024-11-02 12:31:04]  protocol_id=None
[2024-11-02 12:31:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-11-02 12:31:04]  replicas=None
[2024-11-02 12:31:04]  scope=mc16_13TeV
[2024-11-02 12:31:04]  status=None
[2024-11-02 12:31:04]  status_code=0
[2024-11-02 12:31:04]  storage_token=
[2024-11-02 12:31:04]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6387694240/log.41844014._002823.job.log.tgz.1
[2024-11-02 12:31:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/55/e0/log.41844014._002823.job.log.tgz.1
[2024-11-02 12:31:04]  workdir=None
[2024-11-02 12:31:04] ]
[2024-11-02 12:31:04] 2024-11-02 16:30:45,925 | INFO     | transferring file log.41844014._002823.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6387694240/log.41844014._002823.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-11-02 12:31:04] 2024-11-02 16:30:45,925 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6387694240/log.41844014._002823.job.log.tgz.1 /tmp/boinchome/slots/3/log.41844014._002823.job
[2024-11-02 12:31:04] 2024-11-02 16:30:45,939 | INFO     | adding to output.list: log.41844014._002823.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/55/e0/log.41844014._002823.job.log.tgz.
[2024-11-02 12:31:04] 2024-11-02 16:30:45,939 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-11-02 12:31:04] 2024-11-02 16:30:45,940 | INFO     | summary of transferred files:
[2024-11-02 12:31:04] 2024-11-02 16:30:45,940 | INFO     |  -- lfn=log.41844014._002823.job.log.tgz.1, status_code=0, status=transferred
[2024-11-02 12:31:04] 2024-11-02 16:30:45,940 | INFO     | stage-out finished correctly
[2024-11-02 12:31:04] 2024-11-02 16:30:47,496 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-11-02 12:31:04] 2024-11-02 16:30:47,660 | WARNING  | process 313791 is no longer using CPU - aborting
[2024-11-02 12:31:04] 2024-11-02 16:30:47,731 | INFO     | job 6387694240 has state=finished
[2024-11-02 12:31:04] 2024-11-02 16:30:47,731 | INFO     | preparing for final server update for job 6387694240 in state='finished'
[2024-11-02 12:31:04] 2024-11-02 16:30:47,782 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-11-02 12:31:04] 2024-11-02 16:30:47,783 | INFO     | this job has now completed (state=finished)
[2024-11-02 12:31:04] 2024-11-02 16:30:47,783 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-11-02 12:31:04] 2024-11-02 16:30:47,783 | INFO     | log transfer has been attempted: DONE
[2024-11-02 12:31:04] 2024-11-02 16:30:47,783 | INFO     | job 6387694240 has finished - writing final server update
[2024-11-02 12:31:04] 2024-11-02 16:30:47,783 | INFO     | total number of processed events: 50 (read)
[2024-11-02 12:31:04] 2024-11-02 16:30:47,789 | INFO     | executing command: lscpu
[2024-11-02 12:31:04] 2024-11-02 16:30:47,824 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-11-02 12:31:04] 2024-11-02 16:30:47,851 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-11-02 12:31:04] 2024-11-02 16:30:50,163 | INFO     | monitor loop #247: job 0:6387694240 is in state 'finished'
[2024-11-02 12:31:04] 2024-11-02 16:30:50,163 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-02 12:31:04] 2024-11-02 16:30:50,345 | INFO     | CPU arch script returned: x86-64-v4
[2024-11-02 12:31:04] 2024-11-02 16:30:50,345 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6387694240/memory_monitor_summary.json (trf name=prmon)
[2024-11-02 12:31:04] 2024-11-02 16:30:50,346 | INFO     | extracted standard info from prmon json
[2024-11-02 12:31:04] 2024-11-02 16:30:50,347 | INFO     | extracted standard memory fields from prmon json
[2024-11-02 12:31:04] 2024-11-02 16:30:50,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-02 12:31:04] 2024-11-02 16:30:50,349 | INFO     | fitting pss+swap vs Time
[2024-11-02 12:31:04] 2024-11-02 16:30:50,349 | INFO     | model: linear, x: [1730562219.0, 1730562280.0, 1730562341.0, 1730562402.0, 1730562463.0, 1730562524.0, 1730562585.0, 1730562646.0, 1730562707.0, 1730562768.0, 1730
[2024-11-02 12:31:04] 2024-11-02 16:30:50,349 | INFO     | sum of square deviations: 28242390.0
[2024-11-02 12:31:04] 2024-11-02 16:30:50,350 | INFO     | sum of deviations: 14310528386.000002
[2024-11-02 12:31:04] 2024-11-02 16:30:50,350 | INFO     | mean x: 1730563561.0
[2024-11-02 12:31:04] 2024-11-02 16:30:50,350 | INFO     | mean y: 1445543.7333333334
[2024-11-02 12:31:04] 2024-11-02 16:30:50,350 | INFO     | -- intersect: -876881812688.5815
[2024-11-02 12:31:04] 2024-11-02 16:30:50,350 | INFO     | intersect: -876881812688.5815
[2024-11-02 12:31:04] 2024-11-02 16:30:50,350 | INFO     | chi2: 6.2878427434939805
[2024-11-02 12:31:04] 2024-11-02 16:30:50,350 | INFO     | -- intersect: -876881812688.5815
[2024-11-02 12:31:04] 2024-11-02 16:30:50,351 | INFO     | current memory leak: 506.70 B/s (using 45 data points, chi2=6.29)
[2024-11-02 12:31:04] 2024-11-02 16:30:50,351 | INFO     | ..............................
[2024-11-02 12:31:04] 2024-11-02 16:30:50,351 | INFO     | . Timing measurements:
[2024-11-02 12:31:04] 2024-11-02 16:30:50,351 | INFO     | . get job = 0 s
[2024-11-02 12:31:04] 2024-11-02 16:30:50,352 | INFO     | . initial setup = 2 s
[2024-11-02 12:31:04] 2024-11-02 16:30:50,352 | INFO     | . payload setup = 4 s
[2024-11-02 12:31:04] 2024-11-02 16:30:50,352 | INFO     | . stage-in = 0 s
[2024-11-02 12:31:04] 2024-11-02 16:30:50,352 | INFO     | . payload execution = 3130 s
[2024-11-02 12:31:04] 2024-11-02 16:30:50,352 | INFO     | . stage-out = 0 s
[2024-11-02 12:31:04] 2024-11-02 16:30:50,352 | INFO     | . log creation = 0 s
[2024-11-02 12:31:04] 2024-11-02 16:30:50,352 | INFO     | ..............................
[2024-11-02 12:31:04] 2024-11-02 16:30:50,475 | INFO     | 
[2024-11-02 12:31:04] 2024-11-02 16:30:50,475 | INFO     | job summary report
[2024-11-02 12:31:04] 2024-11-02 16:30:50,475 | INFO     | --------------------------------------------------
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | PanDA job id: 6387694240
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | task id: 41844014
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | errors: (none)
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | pilot state: finished 
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | transexitcode: 0
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | exeerrorcode: 0
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | exeerrordiag: 
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | exitcode: 0
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | exitmsg: OK
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | cpuconsumptiontime: 7259 s
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | nevents: 50
[2024-11-02 12:31:04] 2024-11-02 16:30:50,476 | INFO     | neventsw: 0
[2024-11-02 12:31:04] 2024-11-02 16:30:50,477 | INFO     | pid: 313791
[2024-11-02 12:31:04] 2024-11-02 16:30:50,477 | INFO     | pgrp: 313791
[2024-11-02 12:31:04] 2024-11-02 16:30:50,477 | INFO     | corecount: 8
[2024-11-02 12:31:04] 2024-11-02 16:30:50,477 | INFO     | event service: False
[2024-11-02 12:31:04] 2024-11-02 16:30:50,477 | INFO     | sizes: {0: 2412957, 1: 2413156, 4: 2413362, 11: 2413390, 3138: 2439582, 3139: 2448785, 3141: 2448785, 3144: 2449007}
[2024-11-02 12:31:04] 2024-11-02 16:30:50,477 | INFO     | --------------------------------------------------
[2024-11-02 12:31:04] 2024-11-02 16:30:50,477 | INFO     | 
[2024-11-02 12:31:04] 2024-11-02 16:30:50,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-11-02 12:31:04] 2024-11-02 16:30:50,499 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,499 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,499 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,499 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,500 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-02 12:31:04] 2024-11-02 16:30:50,501 | INFO     | job 6387694240 has completed (purged errors)
[2024-11-02 12:31:04] 2024-11-02 16:30:50,501 | INFO     | overall cleanup function is called
[2024-11-02 12:31:04] 2024-11-02 16:30:51,513 | INFO     | --- collectZombieJob: --- 10, [313791]
[2024-11-02 12:31:04] 2024-11-02 16:30:51,513 | INFO     | zombie collector waiting for pid 313791
[2024-11-02 12:31:04] 2024-11-02 16:30:51,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-02 12:31:04] 2024-11-02 16:30:51,513 | INFO     | collected zombie processes
[2024-11-02 12:31:04] 2024-11-02 16:30:51,513 | INFO     | will attempt to kill all subprocesses of pid=313791
[2024-11-02 12:31:04] 2024-11-02 16:30:51,641 | INFO     | process IDs to be killed: [313791] (in reverse order)
[2024-11-02 12:31:04] 2024-11-02 16:30:51,730 | WARNING  | found no corresponding commands to process id(s)
[2024-11-02 12:31:04] 2024-11-02 16:30:51,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-02 12:31:04] 2024-11-02 16:30:51,736 | INFO     | did not find any defunct processes belonging to 313791
[2024-11-02 12:31:04] 2024-11-02 16:30:51,741 | INFO     | did not find any defunct processes belonging to 313791
[2024-11-02 12:31:04] 2024-11-02 16:30:51,742 | INFO     | ready for new job
[2024-11-02 12:31:04] 2024-11-02 16:30:51,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-02 12:31:04] 2024-11-02 16:30:51,755 | INFO     | **************************************
[2024-11-02 12:31:04] 2024-11-02 16:30:51,755 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-02 12:31:04] 2024-11-02 16:30:51,755 | INFO     | **************************************
[2024-11-02 12:31:04] 2024-11-02 16:30:51,755 | INFO     | 
[2024-11-02 12:31:04] 2024-11-02 16:30:51,758 | INFO     | architecture information:
[2024-11-02 12:31:04] 2024-11-02 16:30:51,758 | INFO     | executing command: cat /etc/os-release
[2024-11-02 12:31:04] 2024-11-02 16:30:51,774 | INFO     | cat /etc/os-release:
[2024-11-02 12:31:04] NAME="CentOS Linux"
[2024-11-02 12:31:04] VERSION="7 (Core)"
[2024-11-02 12:31:04] ID="centos"
[2024-11-02 12:31:04] ID_LIKE="rhel fedora"
[2024-11-02 12:31:04] VERSION_ID="7"
[2024-11-02 12:31:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-02 12:31:04] ANSI_COLOR="0;31"
[2024-11-02 12:31:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-02 12:31:04] HOME_URL="https://www.centos.org/"
[2024-11-02 12:31:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-02 12:31:04] 
[2024-11-02 12:31:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-02 12:31:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-02 12:31:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-02 12:31:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-02 12:31:04] 
[2024-11-02 12:31:04] 2024-11-02 16:30:51,774 | INFO     | **************************************
[2024-11-02 12:31:04] 2024-11-02 16:30:52,276 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-11-02 12:31:04] 2024-11-02 16:30:52,297 | INFO     | sufficient remaining disk space (102959677440 B)
[2024-11-02 12:31:04] 2024-11-02 16:30:52,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-02 12:31:04] 2024-11-02 16:30:52,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-02 12:31:04] 2024-11-02 16:30:52,298 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-11-02 12:31:04] 2024-11-02 16:30:52,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-02 12:31:04] 2024-11-02 16:30:52,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-02 12:31:04] 2024-11-02 16:30:52,298 | INFO     | found 0 job(s) in 20 queues
[2024-11-02 12:31:04] 2024-11-02 16:30:52,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-02 12:31:04] 2024-11-02 16:30:52,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-02 12:31:04] 2024-11-02 16:30:52,667 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-11-02 12:31:04] 2024-11-02 16:30:52,667 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-11-02 12:31:04] 2024-11-02 16:30:52,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-02 12:31:04] 2024-11-02 16:30:52,667 | INFO     | will abort loop
[2024-11-02 12:31:04] 2024-11-02 16:30:52,790 | INFO     | all job control threads have been joined
[2024-11-02 12:31:04] 2024-11-02 16:30:52,837 | INFO     | all payload control threads have been joined
[2024-11-02 12:31:04] 2024-11-02 16:30:53,303 | INFO     | [job] retrieve thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:53,307 | INFO     | [job] queue monitor thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:53,324 | INFO     | all data control threads have been joined
[2024-11-02 12:31:04] 2024-11-02 16:30:53,546 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-02 12:31:04] 2024-11-02 16:30:53,567 | INFO     | [payload] execute_payloads thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:53,638 | INFO     | [data] copytool_in thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:53,673 | INFO     | [job] job monitor thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:53,724 | INFO     | [payload] failed_post thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:53,796 | INFO     | [job] control thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:53,842 | INFO     | [payload] control thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:54,028 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:54,300 | INFO     | [data] copytool_out thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:54,325 | INFO     | [payload] validate_post thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:54,330 | INFO     | [data] control thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:54,565 | INFO     | [job] create_data_payload thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:54,602 | INFO     | [job] validate thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:54,740 | INFO     | [payload] validate_pre thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:57,548 | INFO     | [data] queue_monitor thread has finished
[2024-11-02 12:31:04] 2024-11-02 16:30:58,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790006691648)>', '<ExcThread(monitor, started 139789723039488)>']
[2024-11-02 12:31:04] 2024-11-02 16:30:59,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-02 12:31:04] 2024-11-02 16:30:59,334 | INFO     | [monitor] control thread has ended
[2024-11-02 12:31:04] 2024-11-02 16:31:03,763 | INFO     | all workflow threads have been joined
[2024-11-02 12:31:04] 2024-11-02 16:31:03,763 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-02 12:31:04] 2024-11-02 16:31:03,763 | INFO     | traces error code: 0
[2024-11-02 12:31:04] 2024-11-02 16:31:03,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-02 12:31:04] 2024-11-02 16:31:03,841 [wrapper] ==== pilot stdout END ====
[2024-11-02 12:31:04] 2024-11-02 16:31:03,845 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-02 12:31:04] 2024-11-02 16:31:03,849 [wrapper] pilotpid: 298824
[2024-11-02 12:31:04] 2024-11-02 16:31:03,852 [wrapper] Pilot exit status: 0
[2024-11-02 12:31:04] 2024-11-02 16:31:03,862 [wrapper] pandaids: 6387694240
[2024-11-02 12:31:04] 2024-11-02 16:31:03,906 [wrapper] cleanup supervisor_pilot 312608 298825
[2024-11-02 12:31:04] 2024-11-02 16:31:03,910 [wrapper] Test setup, not cleaning
[2024-11-02 12:31:04] 2024-11-02 16:31:03,914 [wrapper] ==== wrapper stdout END ====
[2024-11-02 12:31:04] 2024-11-02 16:31:03,917 [wrapper] ==== wrapper stderr END ====
[2024-11-02 12:31:04] 2024-11-02 16:31:03,924 [wrapper] apfmon messages muted
[2024-11-02 12:31:04]  *** Error codes and diagnostics ***
[2024-11-02 12:31:04]     "exeErrorCode": 0,
[2024-11-02 12:31:04]     "exeErrorDiag": "",
[2024-11-02 12:31:04]     "pilotErrorCode": 0,
[2024-11-02 12:31:04]     "pilotErrorDiag": "",
[2024-11-02 12:31:04]  *** Listing of results directory ***
[2024-11-02 12:31:04] total 403424
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas    486088 Nov  2 10:55 pilot3.tar.gz
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas      5652 Nov  2 11:17 queuedata.json
[2024-11-02 12:31:04] -rwx------ 1 boincer umatlas     34589 Nov  2 11:18 runpilot2-wrapper.sh
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas       100 Nov  2 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-02 12:31:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov  2 11:38 run_atlas
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas       105 Nov  2 11:38 job.xml
[2024-11-02 12:31:04] -rw-r--r-- 2 boincer umatlas 357448248 Nov  2 11:38 EVNT.41779615._000010.pool.root.1
[2024-11-02 12:31:04] -rw-r--r-- 2 boincer umatlas     17569 Nov  2 11:38 start_atlas.sh
[2024-11-02 12:31:04] drwxrwx--x 2 boincer umatlas      4096 Nov  2 11:38 shared
[2024-11-02 12:31:04] -rw-r--r-- 2 boincer umatlas    499917 Nov  2 11:38 input.tar.gz
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas         0 Nov  2 11:38 boinc_lockfile
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas      2852 Nov  2 11:38 pandaJob.out
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas       467 Nov  2 11:38 setup.sh.local
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas   1029695 Nov  2 11:38 agis_schedconf.cvmfs.json
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas   1602446 Nov  2 11:38 agis_ddmendpoints.agis.ALL.json
[2024-11-02 12:31:04] drwx------ 4 boincer umatlas      4096 Nov  2 11:38 pilot3
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas       528 Nov  2 12:23 boinc_task_state.xml
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas      6384 Nov  2 12:27 init_data.xml
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas        95 Nov  2 12:30 pilot_heartbeat.json
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas  48780213 Nov  2 12:30 HITS.41844014._002823.pool.root.1
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas      1048 Nov  2 12:30 memory_monitor_summary.json
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas   1176376 Nov  2 12:30 log.41844014._002823.job.log.tgz.1
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas      8563 Nov  2 12:30 heartbeat.json
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas        26 Nov  2 12:31 wrapper_checkpoint.txt
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas      4525 Nov  2 12:31 pilotlog.txt
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas      8192 Nov  2 12:31 boinc_mmap_file
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas    327156 Nov  2 12:31 log.41844014._002823.job.log.1
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas       353 Nov  2 12:31 output.list
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas       620 Nov  2 12:31 runtime_log
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas   1525760 Nov  2 12:31 result.tar.gz
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas     11428 Nov  2 12:31 runtime_log.err
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas       656 Nov  2 12:31 1tOKDmb4UR6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmd5nMDm35oQWm.diag
[2024-11-02 12:31:04] -rw-r--r-- 1 boincer umatlas     21300 Nov  2 12:31 stderr.txt
[2024-11-02 12:31:04] HITS file was successfully produced:
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas 48780213 Nov  2 12:30 shared/HITS.pool.root.1
[2024-11-02 12:31:04]  *** Contents of shared directory: ***
[2024-11-02 12:31:04] total 398720
[2024-11-02 12:31:04] -rw-r--r-- 2 boincer umatlas 357448248 Nov  2 11:38 ATLAS.root_0
[2024-11-02 12:31:04] -rw-r--r-- 2 boincer umatlas     17569 Nov  2 11:38 start_atlas.sh
[2024-11-02 12:31:04] -rw-r--r-- 2 boincer umatlas    499917 Nov  2 11:38 input.tar.gz
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas  48780213 Nov  2 12:30 HITS.pool.root.1
[2024-11-02 12:31:04] -rw------- 1 boincer umatlas   1525760 Nov  2 12:31 result.tar.gz
12:31:05 (289623): run_atlas exited; CPU time 7201.653819
12:31:05 (289623): called boinc_finish(0)

</stderr_txt>
]]>

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