Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:47:28 (155100): wrapper (7.7.26015): starting
15:47:28 (155100): wrapper: running run_atlas (--nthreads 8)
[2024-11-01 15:47:28] Arguments: --nthreads 8
[2024-11-01 15:47:28] Threads: 8
[2024-11-01 15:47:28] Checking for CVMFS
[2024-11-01 15:47:28] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-01 15:47:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-01 15:47:28] Running cvmfs_config stat atlas.cern.ch
[2024-11-01 15:47:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-01 15:47:28] 2.11.2.0 294477 3319 182916 138995 2 538 15987437 18432000 23323 130560 0 30626622 99.453 43777807 38996 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-11-01 15:47:28] CVMFS is ok
[2024-11-01 15:47:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-11-01 15:47:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-11-01 15:47:28] Further information can be found at the LHC@home message board.
[2024-11-01 15:47:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-01 15:47:28] Checking for apptainer binary...
[2024-11-01 15:47:28] Using apptainer found in PATH at /usr/bin/apptainer
[2024-11-01 15:47:28] Running /usr/bin/apptainer --version
[2024-11-01 15:47:29] apptainer version 1.3.2-1.el7
[2024-11-01 15:47:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-01 15:47:31] c-211-35-1.aglt2.org
[2024-11-01 15:47:31] apptainer works
[2024-11-01 15:47:31] Set ATHENA_PROC_NUMBER=8
[2024-11-01 15:47:31] Set ATHENA_CORE_NUMBER=8
[2024-11-01 15:47:31] Starting ATLAS job with PandaID=6386578365
[2024-11-01 15:47:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-01 17:24:25]  *** The last 200 lines of the pilot log: ***
[2024-11-01 17:24:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-11-01 17:24:25]  is_altstaged=None
[2024-11-01 17:24:25]  is_tar=False
[2024-11-01 17:24:25]  lfn=log.41843694._016947.job.log.tgz.1
[2024-11-01 17:24:25]  mtime=0
[2024-11-01 17:24:25]  protocol_id=None
[2024-11-01 17:24:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-11-01 17:24:25]  replicas=None
[2024-11-01 17:24:25]  scope=mc16_13TeV
[2024-11-01 17:24:25]  status=None
[2024-11-01 17:24:25]  status_code=0
[2024-11-01 17:24:25]  storage_token=
[2024-11-01 17:24:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6386578365/log.41843694._016947.job.log.tgz.1
[2024-11-01 17:24:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/98/27/log.41843694._016947.job.log.tgz.1
[2024-11-01 17:24:25]  workdir=None
[2024-11-01 17:24:25] ]
[2024-11-01 17:24:25] 2024-11-01 21:23:57,601 | INFO     | transferring file log.41843694._016947.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6386578365/log.41843694._016947.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-11-01 17:24:25] 2024-11-01 21:23:57,602 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6386578365/log.41843694._016947.job.log.tgz.1 /tmp/boinchome/slots/0/log.41843694._016947.job
[2024-11-01 17:24:25] 2024-11-01 21:23:57,626 | INFO     | adding to output.list: log.41843694._016947.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/98/27/log.41843694._016947.job.log.tgz.
[2024-11-01 17:24:25] 2024-11-01 21:23:57,627 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-11-01 17:24:25] 2024-11-01 21:23:57,627 | INFO     | summary of transferred files:
[2024-11-01 17:24:25] 2024-11-01 21:23:57,627 | INFO     |  -- lfn=log.41843694._016947.job.log.tgz.1, status_code=0, status=transferred
[2024-11-01 17:24:25] 2024-11-01 21:23:57,627 | INFO     | stage-out finished correctly
[2024-11-01 17:24:25] 2024-11-01 21:23:59,149 | WARNING  | process 184125 is no longer using CPU - aborting
[2024-11-01 17:24:25] 2024-11-01 21:23:59,955 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-11-01 17:24:25] 2024-11-01 21:24:01,332 | INFO     | job 6386578365 has state=finished
[2024-11-01 17:24:25] 2024-11-01 21:24:01,332 | INFO     | preparing for final server update for job 6386578365 in state='finished'
[2024-11-01 17:24:25] 2024-11-01 21:24:01,333 | INFO     | this job has now completed (state=finished)
[2024-11-01 17:24:25] 2024-11-01 21:24:01,333 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-11-01 17:24:25] 2024-11-01 21:24:01,333 | INFO     | log transfer has been attempted: DONE
[2024-11-01 17:24:25] 2024-11-01 21:24:01,333 | INFO     | job 6386578365 has finished - writing final server update
[2024-11-01 17:24:25] 2024-11-01 21:24:01,333 | INFO     | total number of processed events: 50 (read)
[2024-11-01 17:24:25] 2024-11-01 21:24:01,343 | INFO     | executing command: lscpu
[2024-11-01 17:24:25] 2024-11-01 21:24:01,512 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-11-01 17:24:25] 2024-11-01 21:24:01,626 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-11-01 17:24:25] 2024-11-01 21:24:01,654 | INFO     | monitor loop #428: job 0:6386578365 is in state 'finished'
[2024-11-01 17:24:25] 2024-11-01 21:24:01,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-01 17:24:25] 2024-11-01 21:24:04,159 | INFO     | monitor loop #429: job 0:6386578365 is in state 'finished'
[2024-11-01 17:24:25] 2024-11-01 21:24:04,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-01 17:24:25] 2024-11-01 21:24:06,664 | INFO     | monitor loop #430: job 0:6386578365 is in state 'finished'
[2024-11-01 17:24:25] 2024-11-01 21:24:06,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-01 17:24:25] 2024-11-01 21:24:09,168 | INFO     | monitor loop #431: job 0:6386578365 is in state 'finished'
[2024-11-01 17:24:25] 2024-11-01 21:24:09,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-01 17:24:25] 2024-11-01 21:24:11,058 | INFO     | CPU arch script returned: x86-64-v4
[2024-11-01 17:24:25] 2024-11-01 21:24:11,058 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6386578365/memory_monitor_summary.json (trf name=prmon)
[2024-11-01 17:24:25] 2024-11-01 21:24:11,059 | INFO     | extracted standard info from prmon json
[2024-11-01 17:24:25] 2024-11-01 21:24:11,059 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 17:24:25] 2024-11-01 21:24:11,059 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 17:24:25] 2024-11-01 21:24:11,061 | INFO     | fitting pss+swap vs Time
[2024-11-01 17:24:25] 2024-11-01 21:24:11,061 | INFO     | model: linear, x: [1730490844.0, 1730490905.0, 1730490966.0, 1730491027.0, 1730491088.0, 1730491149.0, 1730491210.0, 1730491271.0, 1730491332.0, 1730491393.0, 1730
[2024-11-01 17:24:25] 2024-11-01 21:24:11,061 | INFO     | sum of square deviations: 204198990.22988495
[2024-11-01 17:24:25] 2024-11-01 21:24:11,062 | INFO     | sum of deviations: 35196289818.149414
[2024-11-01 17:24:25] 2024-11-01 21:24:11,062 | INFO     | mean x: 1730493467.2988505
[2024-11-01 17:24:25] 2024-11-01 21:24:11,062 | INFO     | mean y: 1787889.4942528736
[2024-11-01 17:24:25] 2024-11-01 21:24:11,062 | INFO     | -- intersect: -298270742914.386
[2024-11-01 17:24:25] 2024-11-01 21:24:11,062 | INFO     | intersect: -298270742914.386
[2024-11-01 17:24:25] 2024-11-01 21:24:11,062 | INFO     | chi2: 15.202632943097777
[2024-11-01 17:24:25] 2024-11-01 21:24:11,062 | INFO     | -- intersect: -298270742914.386
[2024-11-01 17:24:25] 2024-11-01 21:24:11,062 | INFO     | current memory leak: 172.36 B/s (using 87 data points, chi2=15.20)
[2024-11-01 17:24:25] 2024-11-01 21:24:11,062 | INFO     | ..............................
[2024-11-01 17:24:25] 2024-11-01 21:24:11,063 | INFO     | . Timing measurements:
[2024-11-01 17:24:25] 2024-11-01 21:24:11,063 | INFO     | . get job = 0 s
[2024-11-01 17:24:25] 2024-11-01 21:24:11,063 | INFO     | . initial setup = 2 s
[2024-11-01 17:24:25] 2024-11-01 21:24:11,063 | INFO     | . payload setup = 13 s
[2024-11-01 17:24:25] 2024-11-01 21:24:11,063 | INFO     | . stage-in = 0 s
[2024-11-01 17:24:25] 2024-11-01 21:24:11,063 | INFO     | . payload execution = 5708 s
[2024-11-01 17:24:25] 2024-11-01 21:24:11,063 | INFO     | . stage-out = 1 s
[2024-11-01 17:24:25] 2024-11-01 21:24:11,063 | INFO     | . log creation = 0 s
[2024-11-01 17:24:25] 2024-11-01 21:24:11,063 | INFO     | ..............................
[2024-11-01 17:24:25] 2024-11-01 21:24:11,158 | INFO     | 
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | job summary report
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | --------------------------------------------------
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | PanDA job id: 6386578365
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | task id: 41843694
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | errors: (none)
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | pilot state: finished 
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | transexitcode: 0
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | exeerrorcode: 0
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | exeerrordiag: 
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | exitcode: 0
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | exitmsg: OK
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | cpuconsumptiontime: 15486 s
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | nevents: 50
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | neventsw: 0
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | pid: 184125
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | pgrp: 184125
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | corecount: 8
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | event service: False
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | sizes: {0: 2413053, 1: 2413308, 12: 2413308, 13: 2413542, 22: 2413598, 5726: 2441029, 5727: 2450049, 5729: 2450105, 5740: 2450327}
[2024-11-01 17:24:25] 2024-11-01 21:24:11,159 | INFO     | --------------------------------------------------
[2024-11-01 17:24:25] 2024-11-01 21:24:11,160 | INFO     | 
[2024-11-01 17:24:25] 2024-11-01 21:24:11,160 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | job 6386578365 has completed (purged errors)
[2024-11-01 17:24:25] 2024-11-01 21:24:11,179 | INFO     | overall cleanup function is called
[2024-11-01 17:24:25] 2024-11-01 21:24:12,190 | INFO     | --- collectZombieJob: --- 10, [184125]
[2024-11-01 17:24:25] 2024-11-01 21:24:12,190 | INFO     | zombie collector waiting for pid 184125
[2024-11-01 17:24:25] 2024-11-01 21:24:12,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-01 17:24:25] 2024-11-01 21:24:12,190 | INFO     | collected zombie processes
[2024-11-01 17:24:25] 2024-11-01 21:24:12,190 | INFO     | will attempt to kill all subprocesses of pid=184125
[2024-11-01 17:24:25] 2024-11-01 21:24:12,511 | INFO     | process IDs to be killed: [184125] (in reverse order)
[2024-11-01 17:24:25] 2024-11-01 21:24:12,690 | WARNING  | found no corresponding commands to process id(s)
[2024-11-01 17:24:25] 2024-11-01 21:24:12,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-01 17:24:25] 2024-11-01 21:24:12,705 | INFO     | did not find any defunct processes belonging to 184125
[2024-11-01 17:24:25] 2024-11-01 21:24:12,719 | INFO     | did not find any defunct processes belonging to 184125
[2024-11-01 17:24:25] 2024-11-01 21:24:12,720 | INFO     | ready for new job
[2024-11-01 17:24:25] 2024-11-01 21:24:12,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-01 17:24:25] 2024-11-01 21:24:12,721 | INFO     | **************************************
[2024-11-01 17:24:25] 2024-11-01 21:24:12,722 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-01 17:24:25] 2024-11-01 21:24:12,722 | INFO     | **************************************
[2024-11-01 17:24:25] 2024-11-01 21:24:12,722 | INFO     | 
[2024-11-01 17:24:25] 2024-11-01 21:24:12,726 | INFO     | architecture information:
[2024-11-01 17:24:25] 2024-11-01 21:24:12,727 | INFO     | executing command: cat /etc/os-release
[2024-11-01 17:24:25] 2024-11-01 21:24:12,750 | INFO     | cat /etc/os-release:
[2024-11-01 17:24:25] NAME="CentOS Linux"
[2024-11-01 17:24:25] VERSION="7 (Core)"
[2024-11-01 17:24:25] ID="centos"
[2024-11-01 17:24:25] ID_LIKE="rhel fedora"
[2024-11-01 17:24:25] VERSION_ID="7"
[2024-11-01 17:24:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-01 17:24:25] ANSI_COLOR="0;31"
[2024-11-01 17:24:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-01 17:24:25] HOME_URL="https://www.centos.org/"
[2024-11-01 17:24:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-01 17:24:25] 
[2024-11-01 17:24:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-01 17:24:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-01 17:24:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-01 17:24:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-01 17:24:25] 
[2024-11-01 17:24:25] 2024-11-01 21:24:12,750 | INFO     | **************************************
[2024-11-01 17:24:25] 2024-11-01 21:24:13,252 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-11-01 17:24:25] 2024-11-01 21:24:13,273 | INFO     | sufficient remaining disk space (102272860160 B)
[2024-11-01 17:24:25] 2024-11-01 21:24:13,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-01 17:24:25] 2024-11-01 21:24:13,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-01 17:24:25] 2024-11-01 21:24:13,274 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-11-01 17:24:25] 2024-11-01 21:24:13,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-01 17:24:25] 2024-11-01 21:24:13,274 | INFO     | found 0 job(s) in 20 queues
[2024-11-01 17:24:25] 2024-11-01 21:24:13,274 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-01 17:24:25] 2024-11-01 21:24:13,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-01 17:24:25] 2024-11-01 21:24:13,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-01 17:24:25] 2024-11-01 21:24:13,275 | INFO     | aborting loop
[2024-11-01 17:24:25] 2024-11-01 21:24:14,003 | INFO     | all data control threads have been joined
[2024-11-01 17:24:25] 2024-11-01 21:24:14,279 | INFO     | [job] retrieve thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:14,280 | INFO     | [job] job monitor thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:14,370 | INFO     | all payload control threads have been joined
[2024-11-01 17:24:25] 2024-11-01 21:24:14,395 | INFO     | [data] copytool_in thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:14,428 | INFO     | all job control threads have been joined
[2024-11-01 17:24:25] 2024-11-01 21:24:14,741 | INFO     | [job] validate thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:14,973 | INFO     | [payload] failed_post thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:14,986 | INFO     | [payload] validate_post thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:15,009 | INFO     | [data] control thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:15,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-01 17:24:25] 2024-11-01 21:24:15,276 | INFO     | [payload] execute_payloads thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:15,281 | INFO     | [data] copytool_out thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:15,375 | INFO     | [payload] control thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:15,434 | INFO     | [job] control thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:15,473 | INFO     | [payload] validate_pre thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:15,578 | INFO     | [job] create_data_payload thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:15,704 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:16,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-01 17:24:25] 2024-11-01 21:24:17,177 | INFO     | [job] queue monitor thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:19,113 | INFO     | [data] queue_monitor thread has finished
[2024-11-01 17:24:25] 2024-11-01 21:24:20,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482118379328)>', '<ExcThread(monitor, started 140481535145728)>']
[2024-11-01 17:24:25] 2024-11-01 21:24:20,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-01 17:24:25] 2024-11-01 21:24:20,313 | INFO     | [monitor] control thread has ended
[2024-11-01 17:24:25] 2024-11-01 21:24:25,277 | INFO     | all workflow threads have been joined
[2024-11-01 17:24:25] 2024-11-01 21:24:25,277 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-01 17:24:25] 2024-11-01 21:24:25,277 | INFO     | traces error code: 0
[2024-11-01 17:24:25] 2024-11-01 21:24:25,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-01 17:24:25] 2024-11-01 21:24:25,624 [wrapper] ==== pilot stdout END ====
[2024-11-01 17:24:25] 2024-11-01 21:24:25,627 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-01 17:24:25] 2024-11-01 21:24:25,643 [wrapper] pilotpid: 163727
[2024-11-01 17:24:25] 2024-11-01 21:24:25,649 [wrapper] Pilot exit status: 0
[2024-11-01 17:24:25] 2024-11-01 21:24:25,660 [wrapper] pandaids: 6386578365
[2024-11-01 17:24:25] 2024-11-01 21:24:25,730 [wrapper] cleanup supervisor_pilot 131135 163728
[2024-11-01 17:24:25] 2024-11-01 21:24:25,733 [wrapper] Test setup, not cleaning
[2024-11-01 17:24:25] 2024-11-01 21:24:25,735 [wrapper] ==== wrapper stdout END ====
[2024-11-01 17:24:25] 2024-11-01 21:24:25,737 [wrapper] ==== wrapper stderr END ====
[2024-11-01 17:24:25] 2024-11-01 21:24:25,743 [wrapper] apfmon messages muted
[2024-11-01 17:24:25]  *** Error codes and diagnostics ***
[2024-11-01 17:24:25]     "exeErrorCode": 0,
[2024-11-01 17:24:25]     "exeErrorDiag": "",
[2024-11-01 17:24:25]     "pilotErrorCode": 0,
[2024-11-01 17:24:25]     "pilotErrorDiag": "",
[2024-11-01 17:24:25]  *** Listing of results directory ***
[2024-11-01 17:24:25] total 431652
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas    486088 Nov  1 15:03 pilot3.tar.gz
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas      5652 Nov  1 15:14 queuedata.json
[2024-11-01 17:24:25] -rwx------ 1 boincer umatlas     34589 Nov  1 15:14 runpilot2-wrapper.sh
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas       100 Nov  1 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-01 17:24:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov  1 15:47 run_atlas
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas       105 Nov  1 15:47 job.xml
[2024-11-01 17:24:25] -rw-r--r-- 2 boincer umatlas 383563593 Nov  1 15:47 EVNT.41780242._000020.pool.root.1
[2024-11-01 17:24:25] -rw-r--r-- 2 boincer umatlas     17569 Nov  1 15:47 start_atlas.sh
[2024-11-01 17:24:25] drwxrwx--x 2 boincer umatlas      4096 Nov  1 15:47 shared
[2024-11-01 17:24:25] -rw-r--r-- 2 boincer umatlas    499923 Nov  1 15:47 input.tar.gz
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas         0 Nov  1 15:47 boinc_lockfile
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas      2889 Nov  1 15:47 pandaJob.out
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas       467 Nov  1 15:47 setup.sh.local
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas   1029676 Nov  1 15:47 agis_schedconf.cvmfs.json
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas   1602446 Nov  1 15:47 agis_ddmendpoints.agis.ALL.json
[2024-11-01 17:24:25] drwx------ 4 boincer umatlas      4096 Nov  1 15:47 pilot3
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas       529 Nov  1 17:04 boinc_task_state.xml
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas      6385 Nov  1 17:20 init_data.xml
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas        95 Nov  1 17:23 pilot_heartbeat.json
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas  51076585 Nov  1 17:23 HITS.41843694._016947.pool.root.1
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas      1060 Nov  1 17:23 memory_monitor_summary.json
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas   1217659 Nov  1 17:23 log.41843694._016947.job.log.tgz.1
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas        27 Nov  1 17:24 wrapper_checkpoint.txt
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas      8593 Nov  1 17:24 heartbeat.json
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas      4339 Nov  1 17:24 pilotlog.txt
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas    533984 Nov  1 17:24 log.41843694._016947.job.log.1
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas       353 Nov  1 17:24 output.list
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas      8192 Nov  1 17:24 boinc_mmap_file
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas       620 Nov  1 17:24 runtime_log
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas   1771520 Nov  1 17:24 result.tar.gz
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas     11428 Nov  1 17:24 runtime_log.err
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas       660 Nov  1 17:24 0hyNDmCHCR6n9Rq4apOajLDm4fhM0noT9bVorHsSDmCveLDmAhHBDo.diag
[2024-11-01 17:24:25] -rw-r--r-- 1 boincer umatlas     21608 Nov  1 17:24 stderr.txt
[2024-11-01 17:24:25] HITS file was successfully produced:
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas 51076585 Nov  1 17:23 shared/HITS.pool.root.1
[2024-11-01 17:24:25]  *** Contents of shared directory: ***
[2024-11-01 17:24:25] total 426704
[2024-11-01 17:24:25] -rw-r--r-- 2 boincer umatlas 383563593 Nov  1 15:47 ATLAS.root_0
[2024-11-01 17:24:25] -rw-r--r-- 2 boincer umatlas     17569 Nov  1 15:47 start_atlas.sh
[2024-11-01 17:24:25] -rw-r--r-- 2 boincer umatlas    499923 Nov  1 15:47 input.tar.gz
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas  51076585 Nov  1 17:23 HITS.pool.root.1
[2024-11-01 17:24:25] -rw------- 1 boincer umatlas   1771520 Nov  1 17:24 result.tar.gz
17:24:27 (155100): run_atlas exited; CPU time 15300.593200
17:24:27 (155100): called boinc_finish(0)

</stderr_txt>
]]>

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