Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:02:22 (90469): wrapper (7.7.26015): starting
21:02:22 (90469): wrapper: running run_atlas (--nthreads 8)
[2024-10-31 21:02:22] Arguments: --nthreads 8
[2024-10-31 21:02:22] Threads: 8
[2024-10-31 21:02:22] Checking for CVMFS
[2024-10-31 21:02:23] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-31 21:02:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-31 21:02:23] Running cvmfs_config stat atlas.cern.ch
[2024-10-31 21:02:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-31 21:02:23] 2.11.2.0 16521 3998 256156 138963 0 360 17699160 18432001 15359 130560 0 38551923 99.152 73827069 60646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-10-31 21:02:23] CVMFS is ok
[2024-10-31 21:02:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-31 21:02:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-31 21:02:23] Further information can be found at the LHC@home message board.
[2024-10-31 21:02:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-31 21:02:23] Checking for apptainer binary...
[2024-10-31 21:02:23] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-31 21:02:23] Running /usr/bin/apptainer --version
[2024-10-31 21:02:23] apptainer version 1.3.2-1.el7
[2024-10-31 21:02:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-31 21:02:23] c-212-3.aglt2.org
[2024-10-31 21:02:23] apptainer works
[2024-10-31 21:02:23] Set ATHENA_PROC_NUMBER=8
[2024-10-31 21:02:23] Set ATHENA_CORE_NUMBER=8
[2024-10-31 21:02:23] Starting ATLAS job with PandaID=6385795798
[2024-10-31 21:02:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-31 22:37:07]  *** The last 200 lines of the pilot log: ***
[2024-10-31 22:37:07]  ddmendpoint_alt=None
[2024-10-31 22:37:07]  direct_access_lan=False
[2024-10-31 22:37:07]  direct_access_wan=False
[2024-10-31 22:37:07]  domain=
[2024-10-31 22:37:07]  filesize=1208991
[2024-10-31 22:37:07]  filetype=log
[2024-10-31 22:37:07]  guid=903c57ed-4e1a-44f0-b4fe-7e11be66f20f
[2024-10-31 22:37:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-10-31 22:37:07]  is_altstaged=None
[2024-10-31 22:37:07]  is_tar=False
[2024-10-31 22:37:07]  lfn=log.41843703._008238.job.log.tgz.1
[2024-10-31 22:37:07]  mtime=0
[2024-10-31 22:37:07]  protocol_id=None
[2024-10-31 22:37:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-31 22:37:07]  replicas=None
[2024-10-31 22:37:07]  scope=mc16_13TeV
[2024-10-31 22:37:07]  status=None
[2024-10-31 22:37:07]  status_code=0
[2024-10-31 22:37:07]  storage_token=
[2024-10-31 22:37:07]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6385795798/log.41843703._008238.job.log.tgz.1
[2024-10-31 22:37:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/2b/0a/log.41843703._008238.job.log.tgz.1
[2024-10-31 22:37:07]  workdir=None
[2024-10-31 22:37:07] ]
[2024-10-31 22:37:07] 2024-11-01 02:36:48,733 | INFO     | transferring file log.41843703._008238.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6385795798/log.41843703._008238.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-10-31 22:37:07] 2024-11-01 02:36:48,733 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6385795798/log.41843703._008238.job.log.tgz.1 /tmp/boinchome/slots/5/log.41843703._008238.job
[2024-10-31 22:37:07] 2024-11-01 02:36:48,841 | INFO     | adding to output.list: log.41843703._008238.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/2b/0a/log.41843703._008238.job.log.tgz.
[2024-10-31 22:37:07] 2024-11-01 02:36:48,842 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-31 22:37:07] 2024-11-01 02:36:48,842 | INFO     | summary of transferred files:
[2024-10-31 22:37:07] 2024-11-01 02:36:48,842 | INFO     |  -- lfn=log.41843703._008238.job.log.tgz.1, status_code=0, status=transferred
[2024-10-31 22:37:07] 2024-11-01 02:36:48,842 | INFO     | stage-out finished correctly
[2024-10-31 22:37:07] 2024-11-01 02:36:50,905 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-31 22:37:07] 2024-11-01 02:36:50,974 | INFO     | job 6385795798 has state=finished
[2024-10-31 22:37:07] 2024-11-01 02:36:50,975 | INFO     | preparing for final server update for job 6385795798 in state='finished'
[2024-10-31 22:37:07] 2024-11-01 02:36:50,975 | INFO     | this job has now completed (state=finished)
[2024-10-31 22:37:07] 2024-11-01 02:36:50,975 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-31 22:37:07] 2024-11-01 02:36:50,975 | INFO     | log transfer has been attempted: DONE
[2024-10-31 22:37:07] 2024-11-01 02:36:50,975 | INFO     | job 6385795798 has finished - writing final server update
[2024-10-31 22:37:07] 2024-11-01 02:36:50,975 | INFO     | total number of processed events: 100 (read)
[2024-10-31 22:37:07] 2024-11-01 02:36:50,978 | INFO     | executing command: lscpu
[2024-10-31 22:37:07] 2024-11-01 02:36:51,014 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-10-31 22:37:07] 2024-11-01 02:36:51,037 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-31 22:37:07] 2024-11-01 02:36:54,206 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-31 22:37:07] 2024-11-01 02:36:54,207 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6385795798/memory_monitor_summary.json (trf name=prmon)
[2024-10-31 22:37:07] 2024-11-01 02:36:54,210 | INFO     | extracted standard info from prmon json
[2024-10-31 22:37:07] 2024-11-01 02:36:54,210 | INFO     | extracted standard memory fields from prmon json
[2024-10-31 22:37:07] 2024-11-01 02:36:54,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-31 22:37:07] 2024-11-01 02:36:54,211 | INFO     | fitting pss+swap vs Time
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | model: linear, x: [1730423274.0, 1730423335.0, 1730423396.0, 1730423457.0, 1730423518.0, 1730423579.0, 1730423640.0, 1730423701.0, 1730423762.0, 1730423823.0, 1730
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | sum of square deviations: 197202905.48837242
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | sum of deviations: 53754246428.44186
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | mean x: 1730425866.511628
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | mean y: 1971148.558139535
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | -- intersect: -471683464845.6932
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | intersect: -471683464845.6932
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | chi2: 10.887580571719608
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | -- intersect: -471683464845.6932
[2024-10-31 22:37:07] 2024-11-01 02:36:54,212 | INFO     | current memory leak: 272.58 B/s (using 86 data points, chi2=10.89)
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | ..............................
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | . Timing measurements:
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | . get job = 0 s
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | . initial setup = 2 s
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | . payload setup = 3 s
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | . stage-in = 0 s
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | . payload execution = 5637 s
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | . stage-out = 0 s
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | . log creation = 0 s
[2024-10-31 22:37:07] 2024-11-01 02:36:54,213 | INFO     | ..............................
[2024-10-31 22:37:07] 2024-11-01 02:36:54,282 | INFO     | 
[2024-10-31 22:37:07] 2024-11-01 02:36:54,282 | INFO     | job summary report
[2024-10-31 22:37:07] 2024-11-01 02:36:54,282 | INFO     | --------------------------------------------------
[2024-10-31 22:37:07] 2024-11-01 02:36:54,282 | INFO     | PanDA job id: 6385795798
[2024-10-31 22:37:07] 2024-11-01 02:36:54,282 | INFO     | task id: 41843703
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | errors: (none)
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | pilot state: finished 
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | transexitcode: 0
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | exeerrorcode: 0
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | exeerrordiag: 
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | exitcode: 0
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | exitmsg: OK
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | cpuconsumptiontime: 21884 s
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | nevents: 100
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | neventsw: 0
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | pid: 12706
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | pgrp: 12706
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | corecount: 8
[2024-10-31 22:37:07] 2024-11-01 02:36:54,283 | INFO     | event service: False
[2024-10-31 22:37:07] 2024-11-01 02:36:54,284 | INFO     | sizes: {0: 2413062, 1: 2413261, 3: 2413467, 11: 2413495, 5644: 2440959, 5646: 2449979, 5648: 2450163, 5652: 2450385}
[2024-10-31 22:37:07] 2024-11-01 02:36:54,284 | INFO     | --------------------------------------------------
[2024-10-31 22:37:07] 2024-11-01 02:36:54,284 | INFO     | 
[2024-10-31 22:37:07] 2024-11-01 02:36:54,284 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-10-31 22:37:07] 2024-11-01 02:36:54,304 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,304 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,304 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-31 22:37:07] 2024-11-01 02:36:54,305 | INFO     | job 6385795798 has completed (purged errors)
[2024-10-31 22:37:07] 2024-11-01 02:36:54,306 | INFO     | overall cleanup function is called
[2024-10-31 22:37:07] 2024-11-01 02:36:54,372 | WARNING  | process 12706 is no longer using CPU - aborting
[2024-10-31 22:37:07] 2024-11-01 02:36:54,372 | INFO     | aborting job monitoring since job object (job id=6385795798) has expired
[2024-10-31 22:37:07] 2024-11-01 02:36:55,316 | INFO     | --- collectZombieJob: --- 10, [12706]
[2024-10-31 22:37:07] 2024-11-01 02:36:55,316 | INFO     | zombie collector waiting for pid 12706
[2024-10-31 22:37:07] 2024-11-01 02:36:55,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-31 22:37:07] 2024-11-01 02:36:55,316 | INFO     | collected zombie processes
[2024-10-31 22:37:07] 2024-11-01 02:36:55,316 | INFO     | will attempt to kill all subprocesses of pid=12706
[2024-10-31 22:37:07] 2024-11-01 02:36:55,513 | INFO     | process IDs to be killed: [12706] (in reverse order)
[2024-10-31 22:37:07] 2024-11-01 02:36:55,667 | WARNING  | found no corresponding commands to process id(s)
[2024-10-31 22:37:07] 2024-11-01 02:36:55,668 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-31 22:37:07] 2024-11-01 02:36:55,678 | INFO     | did not find any defunct processes belonging to 12706
[2024-10-31 22:37:07] 2024-11-01 02:36:55,688 | INFO     | did not find any defunct processes belonging to 12706
[2024-10-31 22:37:07] 2024-11-01 02:36:55,688 | INFO     | ready for new job
[2024-10-31 22:37:07] 2024-11-01 02:36:55,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-31 22:37:07] 2024-11-01 02:36:55,689 | INFO     | **************************************
[2024-10-31 22:37:07] 2024-11-01 02:36:55,690 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-31 22:37:07] 2024-11-01 02:36:55,690 | INFO     | **************************************
[2024-10-31 22:37:07] 2024-11-01 02:36:55,690 | INFO     | 
[2024-10-31 22:37:07] 2024-11-01 02:36:55,693 | INFO     | architecture information:
[2024-10-31 22:37:07] 2024-11-01 02:36:55,694 | INFO     | executing command: cat /etc/os-release
[2024-10-31 22:37:07] 2024-11-01 02:36:55,718 | INFO     | cat /etc/os-release:
[2024-10-31 22:37:07] NAME="CentOS Linux"
[2024-10-31 22:37:07] VERSION="7 (Core)"
[2024-10-31 22:37:07] ID="centos"
[2024-10-31 22:37:07] ID_LIKE="rhel fedora"
[2024-10-31 22:37:07] VERSION_ID="7"
[2024-10-31 22:37:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-31 22:37:07] ANSI_COLOR="0;31"
[2024-10-31 22:37:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-31 22:37:07] HOME_URL="https://www.centos.org/"
[2024-10-31 22:37:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-31 22:37:07] 
[2024-10-31 22:37:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-31 22:37:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-31 22:37:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-31 22:37:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-31 22:37:07] 
[2024-10-31 22:37:07] 2024-11-01 02:36:55,719 | INFO     | **************************************
[2024-10-31 22:37:07] 2024-11-01 02:36:56,221 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-10-31 22:37:07] 2024-11-01 02:36:56,236 | INFO     | sufficient remaining disk space (102836994048 B)
[2024-10-31 22:37:07] 2024-11-01 02:36:56,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-31 22:37:07] 2024-11-01 02:36:56,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-31 22:37:07] 2024-11-01 02:36:56,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-31 22:37:07] 2024-11-01 02:36:56,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-31 22:37:07] 2024-11-01 02:36:56,237 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-31 22:37:07] 2024-11-01 02:36:56,237 | INFO     | aborting loop
[2024-10-31 22:37:07] 2024-11-01 02:36:56,237 | INFO     | found 0 job(s) in 20 queues
[2024-10-31 22:37:07] 2024-11-01 02:36:56,238 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-31 22:37:07] 2024-11-01 02:36:56,238 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-31 22:37:07] 2024-11-01 02:36:56,315 | INFO     | all job control threads have been joined
[2024-10-31 22:37:07] 2024-11-01 02:36:56,708 | INFO     | all data control threads have been joined
[2024-10-31 22:37:07] 2024-11-01 02:36:56,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-31 22:37:07] 2024-11-01 02:36:56,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-31 22:37:07] 2024-11-01 02:36:57,242 | INFO     | [job] queue monitor thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,242 | INFO     | [job] retrieve thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,243 | INFO     | [job] job monitor thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,290 | INFO     | [payload] failed_post thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,320 | INFO     | [job] control thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,363 | INFO     | all payload control threads have been joined
[2024-10-31 22:37:07] 2024-11-01 02:36:57,394 | INFO     | [job] validate thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,463 | INFO     | [job] create_data_payload thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,527 | INFO     | [payload] validate_pre thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,589 | INFO     | [payload] validate_post thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,710 | INFO     | [data] control thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:57,781 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:58,046 | INFO     | [payload] execute_payloads thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:58,368 | INFO     | [payload] control thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:58,396 | INFO     | [data] copytool_in thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:36:58,943 | INFO     | [data] copytool_out thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:37:00,985 | INFO     | [data] queue_monitor thread has finished
[2024-10-31 22:37:07] 2024-11-01 02:37:01,919 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543442487104)>', '<ExcThread(monitor, started 140543150348032)>']
[2024-10-31 22:37:07] 2024-11-01 02:37:02,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-31 22:37:07] 2024-11-01 02:37:02,270 | INFO     | [monitor] control thread has ended
[2024-10-31 22:37:07] 2024-11-01 02:37:06,944 | INFO     | all workflow threads have been joined
[2024-10-31 22:37:07] 2024-11-01 02:37:06,944 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-31 22:37:07] 2024-11-01 02:37:06,945 | INFO     | traces error code: 0
[2024-10-31 22:37:07] 2024-11-01 02:37:06,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-31 22:37:07] 2024-11-01 02:37:07,021 [wrapper] ==== pilot stdout END ====
[2024-10-31 22:37:07] 2024-11-01 02:37:07,024 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-31 22:37:07] 2024-11-01 02:37:07,026 [wrapper] pilotpid: 94565
[2024-10-31 22:37:07] 2024-11-01 02:37:07,028 [wrapper] Pilot exit status: 0
[2024-10-31 22:37:07] 2024-11-01 02:37:07,039 [wrapper] pandaids: 6385795798
[2024-10-31 22:37:07] 2024-11-01 02:37:07,112 [wrapper] cleanup supervisor_pilot   681 94566
[2024-10-31 22:37:07] 2024-11-01 02:37:07,115 [wrapper] Test setup, not cleaning
[2024-10-31 22:37:07] 2024-11-01 02:37:07,117 [wrapper] ==== wrapper stdout END ====
[2024-10-31 22:37:07] 2024-11-01 02:37:07,119 [wrapper] ==== wrapper stderr END ====
[2024-10-31 22:37:07] 2024-11-01 02:37:07,133 [wrapper] apfmon messages muted
[2024-10-31 22:37:07]  *** Error codes and diagnostics ***
[2024-10-31 22:37:07]     "exeErrorCode": 0,
[2024-10-31 22:37:07]     "exeErrorDiag": "",
[2024-10-31 22:37:07]     "pilotErrorCode": 0,
[2024-10-31 22:37:07]     "pilotErrorDiag": "",
[2024-10-31 22:37:07]  *** Listing of results directory ***
[2024-10-31 22:37:07] total 486488
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas    486088 Oct 31 20:16 pilot3.tar.gz
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas      5652 Oct 31 20:29 queuedata.json
[2024-10-31 22:37:07] -rwx------ 1 boincer umatlas     34589 Oct 31 20:31 runpilot2-wrapper.sh
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas       100 Oct 31 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-31 22:37:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 31 21:02 run_atlas
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas       105 Oct 31 21:02 job.xml
[2024-10-31 22:37:07] -rw-r--r-- 2 boincer umatlas 385360696 Oct 31 21:02 EVNT.41780262._000017.pool.root.1
[2024-10-31 22:37:07] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 21:02 start_atlas.sh
[2024-10-31 22:37:07] drwxrwx--x 2 boincer umatlas      4096 Oct 31 21:02 shared
[2024-10-31 22:37:07] -rw-r--r-- 2 boincer umatlas    499919 Oct 31 21:02 input.tar.gz
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas         0 Oct 31 21:02 boinc_lockfile
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas      2891 Oct 31 21:02 pandaJob.out
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas       467 Oct 31 21:02 setup.sh.local
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas   1030011 Oct 31 21:02 agis_schedconf.cvmfs.json
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas   1602446 Oct 31 21:02 agis_ddmendpoints.agis.ALL.json
[2024-10-31 22:37:07] drwx------ 4 boincer umatlas      4096 Oct 31 21:02 pilot3
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas       529 Oct 31 22:25 boinc_task_state.xml
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas      6387 Oct 31 22:30 init_data.xml
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas 105428378 Oct 31 22:36 HITS.41843703._008238.pool.root.1
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas      1073 Oct 31 22:36 memory_monitor_summary.json
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas        95 Oct 31 22:36 pilot_heartbeat.json
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas   1208991 Oct 31 22:36 log.41843703._008238.job.log.tgz.1
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas      8540 Oct 31 22:36 heartbeat.json
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas        27 Oct 31 22:36 wrapper_checkpoint.txt
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 31 22:36 boinc_mmap_file
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas      4339 Oct 31 22:37 pilotlog.txt
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas    541030 Oct 31 22:37 log.41843703._008238.job.log.1
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas       353 Oct 31 22:37 output.list
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas       620 Oct 31 22:37 runtime_log
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas   1771520 Oct 31 22:37 result.tar.gz
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas       657 Oct 31 22:37 V6ULDmCkuQ6n7OlckoGmwREmGgkVDo1bjSoqOlfODm9SULDmuNSmZm.diag
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas     11413 Oct 31 22:37 runtime_log.err
[2024-10-31 22:37:07] -rw-r--r-- 1 boincer umatlas     20991 Oct 31 22:37 stderr.txt
[2024-10-31 22:37:07] HITS file was successfully produced:
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas 105428378 Oct 31 22:36 shared/HITS.pool.root.1
[2024-10-31 22:37:07]  *** Contents of shared directory: ***
[2024-10-31 22:37:07] total 481540
[2024-10-31 22:37:07] -rw-r--r-- 2 boincer umatlas 385360696 Oct 31 21:02 ATLAS.root_0
[2024-10-31 22:37:07] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 21:02 start_atlas.sh
[2024-10-31 22:37:07] -rw-r--r-- 2 boincer umatlas    499919 Oct 31 21:02 input.tar.gz
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas 105428378 Oct 31 22:36 HITS.pool.root.1
[2024-10-31 22:37:07] -rw------- 1 boincer umatlas   1771520 Oct 31 22:37 result.tar.gz
22:37:09 (90469): run_atlas exited; CPU time 21388.456448
22:37:09 (90469): called boinc_finish(0)

</stderr_txt>
]]>

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