Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:37:38 (91098): wrapper (7.7.26015): starting
20:37:38 (91098): wrapper: running run_atlas (--nthreads 8)
[2024-10-31 20:37:38] Arguments: --nthreads 8
[2024-10-31 20:37:38] Threads: 8
[2024-10-31 20:37:38] Checking for CVMFS
[2024-10-31 20:37:39] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-31 20:37:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-31 20:37:39] Running cvmfs_config stat atlas.cern.ch
[2024-10-31 20:37:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-31 20:37:40] 2.11.2.0 16521 3973 246640 138963 1 349 17522426 18432001 18175 130560 0 38119803 99.142 73809100 60647 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-10-31 20:37:40] CVMFS is ok
[2024-10-31 20:37:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-31 20:37:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-31 20:37:40] Further information can be found at the LHC@home message board.
[2024-10-31 20:37:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-31 20:37:40] Checking for apptainer binary...
[2024-10-31 20:37:40] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-31 20:37:40] Running /usr/bin/apptainer --version
[2024-10-31 20:37:40] apptainer version 1.3.2-1.el7
[2024-10-31 20:37:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-31 20:37:41] c-212-3.aglt2.org
[2024-10-31 20:37:41] apptainer works
[2024-10-31 20:37:41] Set ATHENA_PROC_NUMBER=8
[2024-10-31 20:37:41] Set ATHENA_CORE_NUMBER=8
[2024-10-31 20:37:41] Starting ATLAS job with PandaID=6385783802
[2024-10-31 20:37:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-31 22:19:01]  *** The last 200 lines of the pilot log: ***
[2024-10-31 22:19:01]  domain=
[2024-10-31 22:19:01]  filesize=1212952
[2024-10-31 22:19:01]  filetype=log
[2024-10-31 22:19:01]  guid=01bb405e-5ecb-4507-9ae4-1ac1c22cadb6
[2024-10-31 22:19:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-10-31 22:19:01]  is_altstaged=None
[2024-10-31 22:19:01]  is_tar=False
[2024-10-31 22:19:01]  lfn=log.41843832._001495.job.log.tgz.1
[2024-10-31 22:19:01]  mtime=0
[2024-10-31 22:19:01]  protocol_id=None
[2024-10-31 22:19:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-31 22:19:01]  replicas=None
[2024-10-31 22:19:01]  scope=mc16_13TeV
[2024-10-31 22:19:01]  status=None
[2024-10-31 22:19:01]  status_code=0
[2024-10-31 22:19:01]  storage_token=
[2024-10-31 22:19:01]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6385783802/log.41843832._001495.job.log.tgz.1
[2024-10-31 22:19:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/26/7a/log.41843832._001495.job.log.tgz.1
[2024-10-31 22:19:01]  workdir=None
[2024-10-31 22:19:01] ]
[2024-10-31 22:19:01] 2024-11-01 02:18:38,430 | INFO     | transferring file log.41843832._001495.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6385783802/log.41843832._001495.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-10-31 22:19:01] 2024-11-01 02:18:38,431 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6385783802/log.41843832._001495.job.log.tgz.1 /tmp/boinchome/slots/3/log.41843832._001495.job
[2024-10-31 22:19:01] 2024-11-01 02:18:38,451 | INFO     | adding to output.list: log.41843832._001495.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/26/7a/log.41843832._001495.job.log.tgz.
[2024-10-31 22:19:01] 2024-11-01 02:18:38,452 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-31 22:19:01] 2024-11-01 02:18:38,452 | INFO     | summary of transferred files:
[2024-10-31 22:19:01] 2024-11-01 02:18:38,452 | INFO     |  -- lfn=log.41843832._001495.job.log.tgz.1, status_code=0, status=transferred
[2024-10-31 22:19:01] 2024-11-01 02:18:38,452 | INFO     | stage-out finished correctly
[2024-10-31 22:19:01] 2024-11-01 02:18:38,791 | INFO     | monitor loop #466: job 0:6385783802 is in state 'finished'
[2024-10-31 22:19:01] 2024-11-01 02:18:38,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 22:19:01] 2024-11-01 02:18:40,350 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-31 22:19:01] 2024-11-01 02:18:41,292 | INFO     | monitor loop #467: job 0:6385783802 is in state 'finished'
[2024-10-31 22:19:01] 2024-11-01 02:18:41,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 22:19:01] 2024-11-01 02:18:41,501 | INFO     | job 6385783802 has state=finished
[2024-10-31 22:19:01] 2024-11-01 02:18:41,502 | INFO     | preparing for final server update for job 6385783802 in state='finished'
[2024-10-31 22:19:01] 2024-11-01 02:18:41,503 | INFO     | this job has now completed (state=finished)
[2024-10-31 22:19:01] 2024-11-01 02:18:41,503 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-31 22:19:01] 2024-11-01 02:18:41,504 | INFO     | log transfer has been attempted: DONE
[2024-10-31 22:19:01] 2024-11-01 02:18:41,504 | INFO     | job 6385783802 has finished - writing final server update
[2024-10-31 22:19:01] 2024-11-01 02:18:41,505 | INFO     | total number of processed events: 100 (read)
[2024-10-31 22:19:01] 2024-11-01 02:18:41,510 | INFO     | executing command: lscpu
[2024-10-31 22:19:01] 2024-11-01 02:18:41,546 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-10-31 22:19:01] 2024-11-01 02:18:41,569 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-31 22:19:01] 2024-11-01 02:18:43,796 | INFO     | monitor loop #468: job 0:6385783802 is in state 'finished'
[2024-10-31 22:19:01] 2024-11-01 02:18:43,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 22:19:01] 2024-11-01 02:18:45,611 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-31 22:19:01] 2024-11-01 02:18:45,612 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6385783802/memory_monitor_summary.json (trf name=prmon)
[2024-10-31 22:19:01] 2024-11-01 02:18:45,612 | INFO     | extracted standard info from prmon json
[2024-10-31 22:19:01] 2024-11-01 02:18:45,612 | INFO     | extracted standard memory fields from prmon json
[2024-10-31 22:19:01] 2024-11-01 02:18:45,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-31 22:19:01] 2024-11-01 02:18:45,614 | INFO     | fitting pss+swap vs Time
[2024-10-31 22:19:01] 2024-11-01 02:18:45,614 | INFO     | model: linear, x: [1730421804.0, 1730421865.0, 1730421926.0, 1730421987.0, 1730422048.0, 1730422109.0, 1730422170.0, 1730422231.0, 1730422292.0, 1730422353.0, 1730
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | sum of square deviations: 241431656.9891305
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | sum of deviations: 58447670856.19565
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | mean x: 1730424579.5108695
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | mean y: 2024574.8043478262
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | -- intersect: -418912742138.14355
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | intersect: -418912742138.14355
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | chi2: 10.7553248986457
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | -- intersect: -418912742138.14355
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | current memory leak: 242.09 B/s (using 92 data points, chi2=10.76)
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | ..............................
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | . Timing measurements:
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | . get job = 0 s
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | . initial setup = 2 s
[2024-10-31 22:19:01] 2024-11-01 02:18:45,615 | INFO     | . payload setup = 6 s
[2024-10-31 22:19:01] 2024-11-01 02:18:45,616 | INFO     | . stage-in = 0 s
[2024-10-31 22:19:01] 2024-11-01 02:18:45,616 | INFO     | . payload execution = 6018 s
[2024-10-31 22:19:01] 2024-11-01 02:18:45,616 | INFO     | . stage-out = 0 s
[2024-10-31 22:19:01] 2024-11-01 02:18:45,616 | INFO     | . log creation = 0 s
[2024-10-31 22:19:01] 2024-11-01 02:18:45,616 | INFO     | ..............................
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | 
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | job summary report
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | --------------------------------------------------
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | PanDA job id: 6385783802
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | task id: 41843832
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | errors: (none)
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | pilot state: finished 
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | transexitcode: 0
[2024-10-31 22:19:01] 2024-11-01 02:18:46,004 | INFO     | exeerrorcode: 0
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | exeerrordiag: 
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | exitcode: 0
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | exitmsg: OK
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | cpuconsumptiontime: 21662 s
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | nevents: 100
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | neventsw: 0
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | pid: 12401
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | pgrp: 12401
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | corecount: 8
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | event service: False
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | sizes: {0: 2413060, 1: 2413259, 5: 2413465, 11: 2413521, 6029: 2441000, 6031: 2450020, 6033: 2450204, 6038: 2450426}
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | --------------------------------------------------
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | 
[2024-10-31 22:19:01] 2024-11-01 02:18:46,005 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-10-31 22:19:01] 2024-11-01 02:18:46,061 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,061 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,061 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,061 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-31 22:19:01] 2024-11-01 02:18:46,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,063 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-31 22:19:01] 2024-11-01 02:18:46,063 | INFO     | job 6385783802 has completed (purged errors)
[2024-10-31 22:19:01] 2024-11-01 02:18:46,063 | INFO     | overall cleanup function is called
[2024-10-31 22:19:01] 2024-11-01 02:18:47,076 | INFO     | --- collectZombieJob: --- 10, [12401]
[2024-10-31 22:19:01] 2024-11-01 02:18:47,076 | INFO     | zombie collector waiting for pid 12401
[2024-10-31 22:19:01] 2024-11-01 02:18:47,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-31 22:19:01] 2024-11-01 02:18:47,076 | INFO     | collected zombie processes
[2024-10-31 22:19:01] 2024-11-01 02:18:47,076 | INFO     | will attempt to kill all subprocesses of pid=12401
[2024-10-31 22:19:01] 2024-11-01 02:18:47,305 | INFO     | process IDs to be killed: [12401] (in reverse order)
[2024-10-31 22:19:01] 2024-11-01 02:18:47,414 | WARNING  | found no corresponding commands to process id(s)
[2024-10-31 22:19:01] 2024-11-01 02:18:47,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-31 22:19:01] 2024-11-01 02:18:47,422 | INFO     | did not find any defunct processes belonging to 12401
[2024-10-31 22:19:01] 2024-11-01 02:18:47,429 | INFO     | did not find any defunct processes belonging to 12401
[2024-10-31 22:19:01] 2024-11-01 02:18:47,429 | INFO     | ready for new job
[2024-10-31 22:19:01] 2024-11-01 02:18:47,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-31 22:19:01] 2024-11-01 02:18:47,430 | INFO     | **************************************
[2024-10-31 22:19:01] 2024-11-01 02:18:47,430 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-31 22:19:01] 2024-11-01 02:18:47,430 | INFO     | **************************************
[2024-10-31 22:19:01] 2024-11-01 02:18:47,431 | INFO     | 
[2024-10-31 22:19:01] 2024-11-01 02:18:47,433 | INFO     | architecture information:
[2024-10-31 22:19:01] 2024-11-01 02:18:47,434 | INFO     | executing command: cat /etc/os-release
[2024-10-31 22:19:01] 2024-11-01 02:18:47,453 | INFO     | cat /etc/os-release:
[2024-10-31 22:19:01] NAME="CentOS Linux"
[2024-10-31 22:19:01] VERSION="7 (Core)"
[2024-10-31 22:19:01] ID="centos"
[2024-10-31 22:19:01] ID_LIKE="rhel fedora"
[2024-10-31 22:19:01] VERSION_ID="7"
[2024-10-31 22:19:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-31 22:19:01] ANSI_COLOR="0;31"
[2024-10-31 22:19:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-31 22:19:01] HOME_URL="https://www.centos.org/"
[2024-10-31 22:19:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-31 22:19:01] 
[2024-10-31 22:19:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-31 22:19:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-31 22:19:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-31 22:19:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-31 22:19:01] 
[2024-10-31 22:19:01] 2024-11-01 02:18:47,453 | INFO     | **************************************
[2024-10-31 22:19:01] 2024-11-01 02:18:47,956 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-10-31 22:19:01] 2024-11-01 02:18:47,982 | INFO     | sufficient remaining disk space (102174294016 B)
[2024-10-31 22:19:01] 2024-11-01 02:18:47,983 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-31 22:19:01] 2024-11-01 02:18:47,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-31 22:19:01] 2024-11-01 02:18:47,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-31 22:19:01] 2024-11-01 02:18:47,984 | INFO     | aborting loop
[2024-10-31 22:19:01] 2024-11-01 02:18:48,304 | INFO     | all payload control threads have been joined
[2024-10-31 22:19:01] 2024-11-01 02:18:48,551 | INFO     | all data control threads have been joined
[2024-10-31 22:19:01] 2024-11-01 02:18:48,673 | INFO     | found 0 job(s) in 20 queues
[2024-10-31 22:19:01] 2024-11-01 02:18:48,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-31 22:19:01] 2024-11-01 02:18:48,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-31 22:19:01] 2024-11-01 02:18:48,788 | INFO     | all job control threads have been joined
[2024-10-31 22:19:01] 2024-11-01 02:18:48,988 | INFO     | [job] retrieve thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:48,989 | INFO     | [job] job monitor thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:49,006 | INFO     | [payload] failed_post thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:49,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-31 22:19:01] 2024-11-01 02:18:49,310 | INFO     | [payload] control thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:49,557 | INFO     | [data] control thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:49,654 | INFO     | [payload] execute_payloads thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:49,793 | INFO     | [job] control thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:49,906 | INFO     | [data] copytool_in thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:50,025 | INFO     | [payload] validate_pre thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:50,104 | INFO     | [job] validate thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:50,120 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:50,209 | INFO     | [job] create_data_payload thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:50,557 | INFO     | [payload] validate_post thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:50,678 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-31 22:19:01] 2024-11-01 02:18:50,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-31 22:19:01] 2024-11-01 02:18:51,050 | INFO     | [data] copytool_out thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:51,684 | INFO     | [job] queue monitor thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:54,911 | INFO     | [data] queue_monitor thread has finished
[2024-10-31 22:19:01] 2024-11-01 02:18:56,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468599019328)>', '<ExcThread(monitor, started 140468021085952)>']
[2024-10-31 22:19:01] 2024-11-01 02:18:56,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-31 22:19:01] 2024-11-01 02:18:56,714 | INFO     | [monitor] control thread has ended
[2024-10-31 22:19:01] 2024-11-01 02:19:01,332 | INFO     | all workflow threads have been joined
[2024-10-31 22:19:01] 2024-11-01 02:19:01,332 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-31 22:19:01] 2024-11-01 02:19:01,332 | INFO     | traces error code: 0
[2024-10-31 22:19:01] 2024-11-01 02:19:01,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-31 22:19:01] 2024-11-01 02:19:01,429 [wrapper] ==== pilot stdout END ====
[2024-10-31 22:19:01] 2024-11-01 02:19:01,431 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-31 22:19:01] 2024-11-01 02:19:01,433 [wrapper] pilotpid: 97828
[2024-10-31 22:19:01] 2024-11-01 02:19:01,435 [wrapper] Pilot exit status: 0
[2024-10-31 22:19:01] 2024-11-01 02:19:01,449 [wrapper] pandaids: 6385783802
[2024-10-31 22:19:01] 2024-11-01 02:19:01,529 [wrapper] cleanup supervisor_pilot 48148 97829
[2024-10-31 22:19:01] 2024-11-01 02:19:01,531 [wrapper] Test setup, not cleaning
[2024-10-31 22:19:01] 2024-11-01 02:19:01,532 [wrapper] ==== wrapper stdout END ====
[2024-10-31 22:19:01] 2024-11-01 02:19:01,534 [wrapper] ==== wrapper stderr END ====
[2024-10-31 22:19:01] 2024-11-01 02:19:01,538 [wrapper] apfmon messages muted
[2024-10-31 22:19:01]  *** Error codes and diagnostics ***
[2024-10-31 22:19:01]     "exeErrorCode": 0,
[2024-10-31 22:19:01]     "exeErrorDiag": "",
[2024-10-31 22:19:01]     "pilotErrorCode": 0,
[2024-10-31 22:19:01]     "pilotErrorDiag": "",
[2024-10-31 22:19:01]  *** Listing of results directory ***
[2024-10-31 22:19:01] total 481980
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas    486088 Oct 31 19:14 pilot3.tar.gz
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas      5652 Oct 31 20:04 queuedata.json
[2024-10-31 22:19:01] -rwx------ 1 boincer umatlas     34589 Oct 31 20:04 runpilot2-wrapper.sh
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas       100 Oct 31 20:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-31 22:19:01] -rwxr-xr-x 1 boincer umatlas      7986 Oct 31 20:37 run_atlas
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas       105 Oct 31 20:37 job.xml
[2024-10-31 22:19:01] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 20:37 start_atlas.sh
[2024-10-31 22:19:01] drwxrwx--x 2 boincer umatlas      4096 Oct 31 20:37 shared
[2024-10-31 22:19:01] -rw-r--r-- 2 boincer umatlas    499924 Oct 31 20:37 input.tar.gz
[2024-10-31 22:19:01] -rw-r--r-- 2 boincer umatlas 383679679 Oct 31 20:37 EVNT.41779939._000011.pool.root.1
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas         0 Oct 31 20:37 boinc_lockfile
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas      2890 Oct 31 20:37 pandaJob.out
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas       467 Oct 31 20:37 setup.sh.local
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas   1030011 Oct 31 20:37 agis_schedconf.cvmfs.json
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas   1602446 Oct 31 20:37 agis_ddmendpoints.agis.ALL.json
[2024-10-31 22:19:01] drwx------ 4 boincer umatlas      4096 Oct 31 20:37 pilot3
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas       529 Oct 31 22:06 boinc_task_state.xml
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas        95 Oct 31 22:18 pilot_heartbeat.json
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas 102435652 Oct 31 22:18 HITS.41843832._001495.pool.root.1
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas      6387 Oct 31 22:18 init_data.xml
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas      1071 Oct 31 22:18 memory_monitor_summary.json
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas   1212952 Oct 31 22:18 log.41843832._001495.job.log.tgz.1
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas      8572 Oct 31 22:18 heartbeat.json
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas        27 Oct 31 22:18 wrapper_checkpoint.txt
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas      8192 Oct 31 22:18 boinc_mmap_file
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas      4216 Oct 31 22:19 pilotlog.txt
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas    570590 Oct 31 22:19 log.41843832._001495.job.log.1
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas       353 Oct 31 22:19 output.list
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas       620 Oct 31 22:19 runtime_log
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas   1802240 Oct 31 22:19 result.tar.gz
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas       658 Oct 31 22:19 UFJMDmCKuQ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmf3VMDmVIoD5n.diag
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas     11413 Oct 31 22:19 runtime_log.err
[2024-10-31 22:19:01] -rw-r--r-- 1 boincer umatlas     21242 Oct 31 22:19 stderr.txt
[2024-10-31 22:19:01] HITS file was successfully produced:
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas 102435652 Oct 31 22:18 shared/HITS.pool.root.1
[2024-10-31 22:19:01]  *** Contents of shared directory: ***
[2024-10-31 22:19:01] total 477000
[2024-10-31 22:19:01] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 20:37 start_atlas.sh
[2024-10-31 22:19:01] -rw-r--r-- 2 boincer umatlas    499924 Oct 31 20:37 input.tar.gz
[2024-10-31 22:19:01] -rw-r--r-- 2 boincer umatlas 383679679 Oct 31 20:37 ATLAS.root_0
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas 102435652 Oct 31 22:18 HITS.pool.root.1
[2024-10-31 22:19:01] -rw------- 1 boincer umatlas   1802240 Oct 31 22:19 result.tar.gz
22:19:02 (91098): run_atlas exited; CPU time 20982.955235
22:19:02 (91098): called boinc_finish(0)

</stderr_txt>
]]>

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