Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:18:11 (4115787): wrapper (7.7.26015): starting
00:18:11 (4115787): wrapper: running run_atlas (--nthreads 8)
[2024-11-01 00:18:11] Arguments: --nthreads 8
[2024-11-01 00:18:11] Threads: 8
[2024-11-01 00:18:11] Checking for CVMFS
[2024-11-01 00:18:11] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-01 00:18:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-01 00:18:11] Running cvmfs_config stat atlas.cern.ch
[2024-11-01 00:18:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-01 00:18:11] 2.11.5.0 678199 4285 91300 138962 1 86 3681026 4097025 0 130560 0 123039844 100.000 915445 72116 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2024-11-01 00:18:11] CVMFS is ok
[2024-11-01 00:18:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-11-01 00:18:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-11-01 00:18:11] Further information can be found at the LHC@home message board.
[2024-11-01 00:18:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-01 00:18:11] Checking for apptainer binary...
[2024-11-01 00:18:11] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2024-11-01 00:18:11] apptainer is not installed, using version from CVMFS
[2024-11-01 00:18:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-01 00:18:11] pckeatlas02
[2024-11-01 00:18:11] apptainer works
[2024-11-01 00:18:11] Set ATHENA_PROC_NUMBER=8
[2024-11-01 00:18:11] Set ATHENA_CORE_NUMBER=8
[2024-11-01 00:18:11] Starting ATLAS job with PandaID=6385648687
[2024-11-01 00:18:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-01 00:19:49]  *** The last 200 lines of the pilot log: ***
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | WARNING  | found no stored workdir sizes
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | WARNING  | wrong length of table data, x=[1730416712.0], y=[902.0] (must be same and length>=4)
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | ..............................
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . Timing measurements:
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . get job = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . initial setup = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . payload setup = 2 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . stage-in = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . payload execution = 54 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | . stage-out = 4 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | . log creation = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | ..............................
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385648687/pilotlog.txt
[2024-11-01 00:19:49] 2024-10-31 23:19:35,129 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-11-01 00:19:49] - Log from pilotlog.txt -
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | INFO     | extracted standard info from prmon json
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | WARNING  | found no stored workdir sizes
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | WARNING  | wrong length of table data, x=[1730416712.0], y=[902.0] (must be same and length>=4)
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | ..............................
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . Timing measurements:
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . get job = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . initial setup = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . payload setup = 2 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . stage-in = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . payload execution = 54 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | . stage-out = 4 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | . log creation = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | ..............................
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385648687/pilotlog.txt
[2024-11-01 00:19:49] 2024-10-31 23:19:35,130 | WARNING  | 
[2024-11-01 00:19:49] [begin log extracts]
[2024-11-01 00:19:49] - Log from pilotlog.txt -
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | INFO     | extracted standard info from prmon json
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:19:49] 2024-10-31 23:19:35,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | WARNING  | found no stored workdir sizes
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | WARNING  | wrong length of table data, x=[1730416712.0], y=[902.0] (must be same and length>=4)
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | ..............................
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . Timing measurements:
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . get job = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . initial setup = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . payload setup = 2 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . stage-in = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,122 | INFO     | . payload execution = 54 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | . stage-out = 4 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | . log creation = 0 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | ..............................
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:19:49] 2024-10-31 23:19:35,123 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385648687/pilotlog.txt
[2024-11-01 00:19:49] [end log extracts]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,130 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2024-11-01 00:19:49] 2024-10-31 23:19:35,130 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:19:21,725 CRITICAL Transform executor raised TransformValidationExcep
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | 
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | job summary report
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | --------------------------------------------------
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | PanDA job id: 6385648687
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | task id: 41843948
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:19:21,725 CRITICAL Transform executor raised TransformValidationExceptio
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | error 2/2: 1165: Local output file is missing
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | pilot state: failed 
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | transexitcode: 65
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | exeerrorcode: 65
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: "IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'"
[2024-11-01 00:19:49] 2024-10-31 23:19:35,167 | INFO     | exitcode: 65
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: "IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'"
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | cpuconsumptiontime: 19 s
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | nevents: 0
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | neventsw: 0
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | pid: 4126557
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | pgrp: 4126557
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | corecount: 8
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | event service: False
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | sizes: {0: 2413184, 1: 2413390, 11: 2413418, 61: 2435726, 62: 2440042, 64: 2440042, 66: 2440198, 68: 2440368}
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | --------------------------------------------------
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | 
[2024-11-01 00:19:49] 2024-10-31 23:19:35,168 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2024-11-01 00:19:49] 2024-10-31 23:19:35,178 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,178 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,178 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,178 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | job 6385648687 has completed (purged errors)
[2024-11-01 00:19:49] 2024-10-31 23:19:35,179 | INFO     | overall cleanup function is called
[2024-11-01 00:19:49] 2024-10-31 23:19:36,185 | INFO     | --- collectZombieJob: --- 10, [4126557]
[2024-11-01 00:19:49] 2024-10-31 23:19:36,185 | INFO     | zombie collector waiting for pid 4126557
[2024-11-01 00:19:49] 2024-10-31 23:19:36,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-01 00:19:49] 2024-10-31 23:19:36,185 | INFO     | collected zombie processes
[2024-11-01 00:19:49] 2024-10-31 23:19:36,185 | INFO     | will attempt to kill all subprocesses of pid=4126557
[2024-11-01 00:19:49] 2024-10-31 23:19:36,204 | INFO     | process IDs to be killed: [4126557] (in reverse order)
[2024-11-01 00:19:49] 2024-10-31 23:19:36,220 | WARNING  | found no corresponding commands to process id(s)
[2024-11-01 00:19:49] 2024-10-31 23:19:36,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-01 00:19:49] 2024-10-31 23:19:36,221 | INFO     | did not find any defunct processes belonging to 4126557
[2024-11-01 00:19:49] 2024-10-31 23:19:36,222 | INFO     | did not find any defunct processes belonging to 4126557
[2024-11-01 00:19:49] 2024-10-31 23:19:36,222 | INFO     | ready for new job
[2024-11-01 00:19:49] 2024-10-31 23:19:36,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-01 00:19:49] 2024-10-31 23:19:36,223 | INFO     | **************************************
[2024-11-01 00:19:49] 2024-10-31 23:19:36,223 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-01 00:19:49] 2024-10-31 23:19:36,223 | INFO     | **************************************
[2024-11-01 00:19:49] 2024-10-31 23:19:36,223 | INFO     | 
[2024-11-01 00:19:49] 2024-10-31 23:19:36,235 | INFO     | architecture information:
[2024-11-01 00:19:49] 2024-10-31 23:19:36,235 | INFO     | executing command: cat /etc/os-release
[2024-11-01 00:19:49] 2024-10-31 23:19:36,242 | INFO     | cat /etc/os-release:
[2024-11-01 00:19:49] NAME="CentOS Linux"
[2024-11-01 00:19:49] VERSION="7 (Core)"
[2024-11-01 00:19:49] ID="centos"
[2024-11-01 00:19:49] ID_LIKE="rhel fedora"
[2024-11-01 00:19:49] VERSION_ID="7"
[2024-11-01 00:19:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-01 00:19:49] ANSI_COLOR="0;31"
[2024-11-01 00:19:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-01 00:19:49] HOME_URL="https://www.centos.org/"
[2024-11-01 00:19:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-01 00:19:49] 
[2024-11-01 00:19:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-01 00:19:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-01 00:19:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-01 00:19:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-01 00:19:49] 
[2024-11-01 00:19:49] 2024-10-31 23:19:36,242 | INFO     | **************************************
[2024-11-01 00:19:49] 2024-10-31 23:19:36,745 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2024-11-01 00:19:49] 2024-10-31 23:19:36,753 | INFO     | sufficient remaining disk space (152935858176 B)
[2024-11-01 00:19:49] 2024-10-31 23:19:36,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-01 00:19:49] 2024-10-31 23:19:36,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-01 00:19:49] 2024-10-31 23:19:36,754 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-11-01 00:19:49] 2024-10-31 23:19:36,754 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-01 00:19:49] 2024-10-31 23:19:36,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-01 00:19:49] 2024-10-31 23:19:36,754 | INFO     | found 0 job(s) in 20 queues
[2024-11-01 00:19:49] 2024-10-31 23:19:36,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-01 00:19:49] 2024-10-31 23:19:36,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-01 00:19:49] 2024-10-31 23:19:36,826 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-11-01 00:19:49] 2024-10-31 23:19:36,826 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-11-01 00:19:49] 2024-10-31 23:19:36,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-01 00:19:49] 2024-10-31 23:19:36,826 | INFO     | will abort loop
[2024-11-01 00:19:49] 2024-10-31 23:19:37,574 | INFO     | all data control threads have been joined
[2024-11-01 00:19:49] 2024-10-31 23:19:37,578 | INFO     | all payload control threads have been joined
[2024-11-01 00:19:49] 2024-10-31 23:19:37,759 | INFO     | [job] retrieve thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:37,759 | INFO     | [job] queue monitor thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:37,831 | INFO     | [job] job monitor thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:37,881 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:38,039 | INFO     | [payload] failed_post thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:38,391 | INFO     | all job control threads have been joined
[2024-11-01 00:19:49] 2024-10-31 23:19:38,580 | INFO     | [data] control thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:38,583 | INFO     | [payload] control thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:38,663 | INFO     | [payload] execute_payloads thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:38,759 | INFO     | [data] copytool_out thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:38,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-01 00:19:49] 2024-10-31 23:19:39,012 | INFO     | [job] validate thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:39,105 | INFO     | [payload] validate_post thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:39,106 | INFO     | [job] create_data_payload thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:39,185 | INFO     | [payload] validate_pre thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:39,191 | INFO     | [data] copytool_in thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:39,397 | INFO     | [job] control thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:42,870 | INFO     | [data] queue_monitor thread has finished
[2024-11-01 00:19:49] 2024-10-31 23:19:44,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000303032128)>', '<ExcThread(monitor, started 139999907391232)>']
[2024-11-01 00:19:49] 2024-10-31 23:19:44,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-01 00:19:49] 2024-10-31 23:19:44,795 | INFO     | [monitor] control thread has ended
[2024-11-01 00:19:49] 2024-10-31 23:19:49,558 | INFO     | all workflow threads have been joined
[2024-11-01 00:19:49] 2024-10-31 23:19:49,558 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-01 00:19:49] 2024-10-31 23:19:49,558 | INFO     | traces error code: 0
[2024-11-01 00:19:49] 2024-10-31 23:19:49,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-01 00:19:49] 2024-10-31 23:19:49,615 [wrapper] ==== pilot stdout END ====
[2024-11-01 00:19:49] 2024-10-31 23:19:49,617 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-01 00:19:49] 2024-10-31 23:19:49,618 [wrapper] pilotpid: 4119472
[2024-11-01 00:19:49] 2024-10-31 23:19:49,619 [wrapper] Pilot exit status: 0
[2024-11-01 00:19:49] 2024-10-31 23:19:49,623 [wrapper] pandaids: 6385648687
[2024-11-01 00:19:49] 2024-10-31 23:19:49,635 [wrapper] cleanup supervisor_pilot 4119478 4119473
[2024-11-01 00:19:49] 2024-10-31 23:19:49,636 [wrapper] Test setup, not cleaning
[2024-11-01 00:19:49] 2024-10-31 23:19:49,637 [wrapper] ==== wrapper stdout END ====
[2024-11-01 00:19:49] 2024-10-31 23:19:49,638 [wrapper] ==== wrapper stderr END ====
[2024-11-01 00:19:49] 2024-10-31 23:19:49,640 [wrapper] apfmon messages muted
[2024-11-01 00:19:49]  *** Error codes and diagnostics ***
[2024-11-01 00:19:49]     "exeErrorCode": 65,
[2024-11-01 00:19:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'\"",
[2024-11-01 00:19:49]     "pilotErrorCode": 1305,
[2024-11-01 00:19:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:19:21,725 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'\"",
[2024-11-01 00:19:49]  *** Listing of results directory ***
[2024-11-01 00:19:49] total 370456
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc    486088 Oct 31 23:16 pilot3.tar.gz
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc      5652 Oct 31 23:39 queuedata.json
[2024-11-01 00:19:49] -rwx------. 1 boinc boinc     34589 Oct 31 23:40 runpilot2-wrapper.sh
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc       100 Nov  1 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-01 00:19:49] -rwxr-xr-x. 1 boinc boinc      7986 Nov  1 00:18 run_atlas
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc       105 Nov  1 00:18 job.xml
[2024-11-01 00:19:49] -rw-r--r--. 2 boinc boinc     17569 Nov  1 00:18 start_atlas.sh
[2024-11-01 00:19:49] drwxrwx--x. 2 boinc boinc        68 Nov  1 00:18 shared
[2024-11-01 00:19:49] -rw-r--r--. 2 boinc boinc    499930 Nov  1 00:18 input.tar.gz
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc      6284 Nov  1 00:18 init_data.xml
[2024-11-01 00:19:49] -rw-r--r--. 2 boinc boinc 375290340 Nov  1 00:18 EVNT.41779523._000013.pool.root.1
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc         0 Nov  1 00:18 boinc_lockfile
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc      2891 Nov  1 00:18 pandaJob.out
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc       424 Nov  1 00:18 setup.sh.local
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc   1030011 Nov  1 00:18 agis_schedconf.cvmfs.json
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc   1602446 Nov  1 00:18 agis_ddmendpoints.agis.ALL.json
[2024-11-01 00:19:49] drwx------. 4 boinc boinc      4096 Nov  1 00:18 pilot3
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc       522 Nov  1 00:18 boinc_task_state.xml
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc        95 Nov  1 00:19 pilot_heartbeat.json
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc       946 Nov  1 00:19 memory_monitor_summary.json
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc     29761 Nov  1 00:19 log.41843948._001625.job.log.tgz.1
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc      8509 Nov  1 00:19 heartbeat.json
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc      8192 Nov  1 00:19 boinc_mmap_file
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc        21 Nov  1 00:19 wrapper_checkpoint.txt
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc      4526 Nov  1 00:19 pilotlog.txt
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc     69726 Nov  1 00:19 log.41843948._001625.job.log.1
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc       186 Nov  1 00:19 output.list
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc       620 Nov  1 00:19 runtime_log
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc    122880 Nov  1 00:19 result.tar.gz
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc       633 Nov  1 00:19 uYILDmu0sQ6n9Rq4apOajLDm4fhM0noT9bVorHsSDm9HaLDmnoNj4n.diag
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc     10890 Nov  1 00:19 runtime_log.err
[2024-11-01 00:19:49] -rw-r--r--. 1 boinc boinc     22064 Nov  1 00:19 stderr.txt
[2024-11-01 00:19:49] No HITS result produced
[2024-11-01 00:19:49]  *** Contents of shared directory: ***
[2024-11-01 00:19:49] total 367128
[2024-11-01 00:19:49] -rw-r--r--. 2 boinc boinc     17569 Nov  1 00:18 start_atlas.sh
[2024-11-01 00:19:49] -rw-r--r--. 2 boinc boinc    499930 Nov  1 00:18 input.tar.gz
[2024-11-01 00:19:49] -rw-r--r--. 2 boinc boinc 375290340 Nov  1 00:18 ATLAS.root_0
[2024-11-01 00:19:49] -rw-------. 1 boinc boinc    122880 Nov  1 00:19 result.tar.gz
00:19:51 (4115787): run_atlas exited; CPU time 20.120105
00:19:51 (4115787): called boinc_finish(0)

</stderr_txt>
]]>

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