Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:21:36 (4155982): wrapper (7.7.26015): starting
00:21:36 (4155982): wrapper: running run_atlas (--nthreads 8)
[2024-11-01 00:21:36] Arguments: --nthreads 8
[2024-11-01 00:21:36] Threads: 8
[2024-11-01 00:21:36] Checking for CVMFS
[2024-11-01 00:21:36] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-01 00:21:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-01 00:21:36] Running cvmfs_config stat atlas.cern.ch
[2024-11-01 00:21:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-01 00:21:36] 2.11.5.0 678199 4289 94540 138962 1 86 3691300 4097025 0 130560 0 123160374 100.000 915446 72110 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2024-11-01 00:21:36] CVMFS is ok
[2024-11-01 00:21:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-11-01 00:21:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-11-01 00:21:36] Further information can be found at the LHC@home message board.
[2024-11-01 00:21:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-01 00:21:36] Checking for apptainer binary...
[2024-11-01 00:21:36] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2024-11-01 00:21:36] apptainer is not installed, using version from CVMFS
[2024-11-01 00:21:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-01 00:21:36] pckeatlas02
[2024-11-01 00:21:36] apptainer works
[2024-11-01 00:21:36] Set ATHENA_PROC_NUMBER=8
[2024-11-01 00:21:36] Set ATHENA_CORE_NUMBER=8
[2024-11-01 00:21:36] Starting ATLAS job with PandaID=6385648364
[2024-11-01 00:21:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-01 00:23:14]  *** The last 200 lines of the pilot log: ***
[2024-11-01 00:23:14] 2024-10-31 23:23:00,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | found no stored workdir sizes
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | wrong length of table data, x=[1730416918.0], y=[1844.0] (must be same and length>=4)
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | INFO     | ..............................
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | INFO     | . Timing measurements:
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . get job = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . initial setup = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . payload setup = 3 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . stage-in = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . payload execution = 54 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . stage-out = 4 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . log creation = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | ..............................
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385648364/pilotlog.txt
[2024-11-01 00:23:14] 2024-10-31 23:23:00,345 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-11-01 00:23:14] - Log from pilotlog.txt -
[2024-11-01 00:23:14] 2024-10-31 23:23:00,336 | INFO     | extracted standard info from prmon json
[2024-11-01 00:23:14] 2024-10-31 23:23:00,336 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 00:23:14] 2024-10-31 23:23:00,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | found no stored workdir sizes
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | wrong length of table data, x=[1730416918.0], y=[1844.0] (must be same and length>=4)
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | INFO     | ..............................
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | INFO     | . Timing measurements:
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . get job = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . initial setup = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . payload setup = 3 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . stage-in = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . payload execution = 54 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . stage-out = 4 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . log creation = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | ..............................
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385648364/pilotlog.txt
[2024-11-01 00:23:14] 2024-10-31 23:23:00,345 | WARNING  | 
[2024-11-01 00:23:14] [begin log extracts]
[2024-11-01 00:23:14] - Log from pilotlog.txt -
[2024-11-01 00:23:14] 2024-10-31 23:23:00,336 | INFO     | extracted standard info from prmon json
[2024-11-01 00:23:14] 2024-10-31 23:23:00,336 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 00:23:14] 2024-10-31 23:23:00,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | found no stored workdir sizes
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | WARNING  | wrong length of table data, x=[1730416918.0], y=[1844.0] (must be same and length>=4)
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | INFO     | ..............................
[2024-11-01 00:23:14] 2024-10-31 23:23:00,337 | INFO     | . Timing measurements:
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . get job = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . initial setup = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . payload setup = 3 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . stage-in = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . payload execution = 54 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . stage-out = 4 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | . log creation = 0 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | ..............................
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:23:14] 2024-10-31 23:23:00,338 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385648364/pilotlog.txt
[2024-11-01 00:23:14] [end log extracts]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,345 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2024-11-01 00:23:14] 2024-10-31 23:23:00,345 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:22:47,300 CRITICAL Transform executor raised TransformValidationExcep
[2024-11-01 00:23:14] 2024-10-31 23:23:00,382 | INFO     | 
[2024-11-01 00:23:14] 2024-10-31 23:23:00,382 | INFO     | job summary report
[2024-11-01 00:23:14] 2024-10-31 23:23:00,382 | INFO     | --------------------------------------------------
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | PanDA job id: 6385648364
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | task id: 41843952
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:22:47,300 CRITICAL Transform executor raised TransformValidationExceptio
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | error 2/2: 1165: Local output file is missing
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | pilot state: failed 
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | transexitcode: 65
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | exeerrorcode: 65
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: "IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'"
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | exitcode: 65
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: "IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'"
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | cpuconsumptiontime: 19 s
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | nevents: 0
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | neventsw: 0
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | pid: 4166766
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | pgrp: 4166766
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | corecount: 8
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | event service: False
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | sizes: {0: 2413237, 2: 2413443, 11: 2413471, 62: 2440066, 65: 2440066, 66: 2440094, 67: 2440194, 68: 2440392}
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | --------------------------------------------------
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | 
[2024-11-01 00:23:14] 2024-10-31 23:23:00,383 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,394 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-01 00:23:14] 2024-10-31 23:23:00,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,395 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-01 00:23:14] 2024-10-31 23:23:00,395 | INFO     | job 6385648364 has completed (purged errors)
[2024-11-01 00:23:14] 2024-10-31 23:23:00,395 | INFO     | overall cleanup function is called
[2024-11-01 00:23:14] 2024-10-31 23:23:01,401 | INFO     | --- collectZombieJob: --- 10, [4166766]
[2024-11-01 00:23:14] 2024-10-31 23:23:01,401 | INFO     | zombie collector waiting for pid 4166766
[2024-11-01 00:23:14] 2024-10-31 23:23:01,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-01 00:23:14] 2024-10-31 23:23:01,401 | INFO     | collected zombie processes
[2024-11-01 00:23:14] 2024-10-31 23:23:01,401 | INFO     | will attempt to kill all subprocesses of pid=4166766
[2024-11-01 00:23:14] 2024-10-31 23:23:01,420 | INFO     | process IDs to be killed: [4166766] (in reverse order)
[2024-11-01 00:23:14] 2024-10-31 23:23:01,436 | WARNING  | found no corresponding commands to process id(s)
[2024-11-01 00:23:14] 2024-10-31 23:23:01,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-01 00:23:14] 2024-10-31 23:23:01,437 | INFO     | did not find any defunct processes belonging to 4166766
[2024-11-01 00:23:14] 2024-10-31 23:23:01,438 | INFO     | did not find any defunct processes belonging to 4166766
[2024-11-01 00:23:14] 2024-10-31 23:23:01,438 | INFO     | ready for new job
[2024-11-01 00:23:14] 2024-10-31 23:23:01,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-01 00:23:14] 2024-10-31 23:23:01,439 | INFO     | **************************************
[2024-11-01 00:23:14] 2024-10-31 23:23:01,439 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-01 00:23:14] 2024-10-31 23:23:01,439 | INFO     | **************************************
[2024-11-01 00:23:14] 2024-10-31 23:23:01,439 | INFO     | 
[2024-11-01 00:23:14] 2024-10-31 23:23:01,451 | INFO     | architecture information:
[2024-11-01 00:23:14] 2024-10-31 23:23:01,451 | INFO     | executing command: cat /etc/os-release
[2024-11-01 00:23:14] 2024-10-31 23:23:01,458 | INFO     | cat /etc/os-release:
[2024-11-01 00:23:14] NAME="CentOS Linux"
[2024-11-01 00:23:14] VERSION="7 (Core)"
[2024-11-01 00:23:14] ID="centos"
[2024-11-01 00:23:14] ID_LIKE="rhel fedora"
[2024-11-01 00:23:14] VERSION_ID="7"
[2024-11-01 00:23:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-01 00:23:14] ANSI_COLOR="0;31"
[2024-11-01 00:23:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-01 00:23:14] HOME_URL="https://www.centos.org/"
[2024-11-01 00:23:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-01 00:23:14] 
[2024-11-01 00:23:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-01 00:23:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-01 00:23:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-01 00:23:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-01 00:23:14] 
[2024-11-01 00:23:14] 2024-10-31 23:23:01,458 | INFO     | **************************************
[2024-11-01 00:23:14] 2024-10-31 23:23:01,961 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2024-11-01 00:23:14] 2024-10-31 23:23:01,969 | INFO     | sufficient remaining disk space (153024987136 B)
[2024-11-01 00:23:14] 2024-10-31 23:23:01,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-01 00:23:14] 2024-10-31 23:23:01,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-01 00:23:14] 2024-10-31 23:23:01,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-01 00:23:14] 2024-10-31 23:23:01,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-01 00:23:14] 2024-10-31 23:23:01,970 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-11-01 00:23:14] 2024-10-31 23:23:01,970 | INFO     | found 0 job(s) in 20 queues
[2024-11-01 00:23:14] 2024-10-31 23:23:01,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-01 00:23:14] 2024-10-31 23:23:01,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-01 00:23:14] 2024-10-31 23:23:02,011 | INFO     | all job control threads have been joined
[2024-11-01 00:23:14] 2024-10-31 23:23:02,247 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-11-01 00:23:14] 2024-10-31 23:23:02,247 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-11-01 00:23:14] 2024-10-31 23:23:02,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-01 00:23:14] 2024-10-31 23:23:02,248 | INFO     | will abort loop
[2024-11-01 00:23:14] 2024-10-31 23:23:02,851 | INFO     | all data control threads have been joined
[2024-11-01 00:23:14] 2024-10-31 23:23:02,902 | INFO     | all payload control threads have been joined
[2024-11-01 00:23:14] 2024-10-31 23:23:02,975 | INFO     | [job] retrieve thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:02,975 | INFO     | [job] queue monitor thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:03,016 | INFO     | [job] control thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:03,253 | INFO     | [job] job monitor thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:03,311 | INFO     | [payload] failed_post thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:03,856 | INFO     | [data] control thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:03,907 | INFO     | [payload] control thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:03,975 | INFO     | [data] copytool_out thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:04,110 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:04,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-01 00:23:14] 2024-10-31 23:23:04,154 | INFO     | [payload] execute_payloads thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:04,292 | INFO     | [job] validate thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:04,373 | INFO     | [payload] validate_post thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:04,388 | INFO     | [job] create_data_payload thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:04,428 | INFO     | [data] copytool_in thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:04,459 | INFO     | [payload] validate_pre thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:08,147 | INFO     | [data] queue_monitor thread has finished
[2024-11-01 00:23:14] 2024-10-31 23:23:09,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140146929850176)>', '<ExcThread(monitor, started 140146234083072)>']
[2024-11-01 00:23:14] 2024-10-31 23:23:10,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-01 00:23:14] 2024-10-31 23:23:10,010 | INFO     | [monitor] control thread has ended
[2024-11-01 00:23:14] 2024-10-31 23:23:14,727 | INFO     | all workflow threads have been joined
[2024-11-01 00:23:14] 2024-10-31 23:23:14,727 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-01 00:23:14] 2024-10-31 23:23:14,727 | INFO     | traces error code: 0
[2024-11-01 00:23:14] 2024-10-31 23:23:14,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-01 00:23:14] 2024-10-31 23:23:14,782 [wrapper] ==== pilot stdout END ====
[2024-11-01 00:23:14] 2024-10-31 23:23:14,789 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-01 00:23:14] 2024-10-31 23:23:14,791 [wrapper] pilotpid: 4159672
[2024-11-01 00:23:14] 2024-10-31 23:23:14,792 [wrapper] Pilot exit status: 0
[2024-11-01 00:23:14] 2024-10-31 23:23:14,795 [wrapper] pandaids: 6385648364
[2024-11-01 00:23:14] 2024-10-31 23:23:14,807 [wrapper] cleanup supervisor_pilot 4159678 4159673
[2024-11-01 00:23:14] 2024-10-31 23:23:14,808 [wrapper] Test setup, not cleaning
[2024-11-01 00:23:14] 2024-10-31 23:23:14,809 [wrapper] ==== wrapper stdout END ====
[2024-11-01 00:23:14] 2024-10-31 23:23:14,810 [wrapper] ==== wrapper stderr END ====
[2024-11-01 00:23:14] 2024-10-31 23:23:14,812 [wrapper] apfmon messages muted
[2024-11-01 00:23:14]  *** Error codes and diagnostics ***
[2024-11-01 00:23:14]     "exeErrorCode": 65,
[2024-11-01 00:23:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'\"",
[2024-11-01 00:23:14]     "pilotErrorCode": 1305,
[2024-11-01 00:23:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:22:47,300 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'\"",
[2024-11-01 00:23:14]  *** Listing of results directory ***
[2024-11-01 00:23:14] total 372088
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc    486088 Oct 31 23:16 pilot3.tar.gz
[2024-11-01 00:23:14] -rwx------. 1 boinc boinc     34589 Oct 31 23:34 runpilot2-wrapper.sh
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc      5652 Oct 31 23:34 queuedata.json
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc       100 Nov  1 00:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-01 00:23:14] -rwxr-xr-x. 1 boinc boinc      7986 Nov  1 00:21 run_atlas
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc       105 Nov  1 00:21 job.xml
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc      6284 Nov  1 00:21 init_data.xml
[2024-11-01 00:23:14] -rw-r--r--. 2 boinc boinc 376962474 Nov  1 00:21 EVNT.41779529._000004.pool.root.1
[2024-11-01 00:23:14] -rw-r--r--. 2 boinc boinc     17569 Nov  1 00:21 start_atlas.sh
[2024-11-01 00:23:14] drwxrwx--x. 2 boinc boinc        68 Nov  1 00:21 shared
[2024-11-01 00:23:14] -rw-r--r--. 2 boinc boinc    499925 Nov  1 00:21 input.tar.gz
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc         0 Nov  1 00:21 boinc_lockfile
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc      2894 Nov  1 00:21 pandaJob.out
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc       424 Nov  1 00:21 setup.sh.local
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc   1030011 Nov  1 00:21 agis_schedconf.cvmfs.json
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc   1602446 Nov  1 00:21 agis_ddmendpoints.agis.ALL.json
[2024-11-01 00:23:14] drwx------. 4 boinc boinc      4096 Nov  1 00:21 pilot3
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc       523 Nov  1 00:22 boinc_task_state.xml
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc        95 Nov  1 00:22 pilot_heartbeat.json
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc       960 Nov  1 00:22 memory_monitor_summary.json
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc     29798 Nov  1 00:22 log.41843952._000986.job.log.tgz.1
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc      8507 Nov  1 00:23 heartbeat.json
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc      8192 Nov  1 00:23 boinc_mmap_file
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc        22 Nov  1 00:23 wrapper_checkpoint.txt
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc      4526 Nov  1 00:23 pilotlog.txt
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc     69743 Nov  1 00:23 log.41843952._000986.job.log.1
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc       186 Nov  1 00:23 output.list
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc       620 Nov  1 00:23 runtime_log
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc    122880 Nov  1 00:23 result.tar.gz
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc     10890 Nov  1 00:23 runtime_log.err
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc       633 Nov  1 00:23 QwfKDmsvsQ6n7OlckoGmwREmGgkVDo1bjSoqOlfODm9GULDmkOwOzm.diag
[2024-11-01 00:23:14] -rw-r--r--. 1 boinc boinc     22067 Nov  1 00:23 stderr.txt
[2024-11-01 00:23:14] No HITS result produced
[2024-11-01 00:23:14]  *** Contents of shared directory: ***
[2024-11-01 00:23:14] total 368760
[2024-11-01 00:23:14] -rw-r--r--. 2 boinc boinc 376962474 Nov  1 00:21 ATLAS.root_0
[2024-11-01 00:23:14] -rw-r--r--. 2 boinc boinc     17569 Nov  1 00:21 start_atlas.sh
[2024-11-01 00:23:14] -rw-r--r--. 2 boinc boinc    499925 Nov  1 00:21 input.tar.gz
[2024-11-01 00:23:14] -rw-------. 1 boinc boinc    122880 Nov  1 00:23 result.tar.gz
00:23:16 (4155982): run_atlas exited; CPU time 20.225726
00:23:16 (4155982): called boinc_finish(0)

</stderr_txt>
]]>

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