Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:07:48 (4014594): wrapper (7.7.26015): starting
00:07:48 (4014594): wrapper: running run_atlas (--nthreads 8)
[2024-11-01 00:07:48] Arguments: --nthreads 8
[2024-11-01 00:07:48] Threads: 8
[2024-11-01 00:07:48] Checking for CVMFS
[2024-11-01 00:07:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-01 00:07:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-01 00:07:48] Running cvmfs_config stat atlas.cern.ch
[2024-11-01 00:07:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-01 00:07:48] 2.11.5.0 678199 4275 89176 138961 3 15 3670648 4097025 0 130560 0 122738519 100.000 914279 72104 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2024-11-01 00:07:48] CVMFS is ok
[2024-11-01 00:07:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-11-01 00:07:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-11-01 00:07:48] Further information can be found at the LHC@home message board.
[2024-11-01 00:07:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-01 00:07:48] Checking for apptainer binary...
[2024-11-01 00:07:48] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2024-11-01 00:07:48] apptainer is not installed, using version from CVMFS
[2024-11-01 00:07:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-01 00:07:48] pckeatlas02
[2024-11-01 00:07:48] apptainer works
[2024-11-01 00:07:48] Set ATHENA_PROC_NUMBER=8
[2024-11-01 00:07:48] Set ATHENA_CORE_NUMBER=8
[2024-11-01 00:07:48] Starting ATLAS job with PandaID=6385647992
[2024-11-01 00:07:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-01 00:09:26]  *** The last 200 lines of the pilot log: ***
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | found no stored workdir sizes
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | wrong length of table data, x=[1730416090.0], y=[1727.0] (must be same and length>=4)
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | ..............................
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . Timing measurements:
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . get job = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . initial setup = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . payload setup = 3 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . stage-in = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . payload execution = 54 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . stage-out = 4 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . log creation = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | ..............................
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385647992/pilotlog.txt
[2024-11-01 00:09:26] 2024-10-31 23:09:12,420 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-11-01 00:09:26] - Log from pilotlog.txt -
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | INFO     | extracted standard info from prmon json
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | found no stored workdir sizes
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | wrong length of table data, x=[1730416090.0], y=[1727.0] (must be same and length>=4)
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | ..............................
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . Timing measurements:
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . get job = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . initial setup = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . payload setup = 3 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . stage-in = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . payload execution = 54 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . stage-out = 4 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . log creation = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | ..............................
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385647992/pilotlog.txt
[2024-11-01 00:09:26] 2024-10-31 23:09:12,421 | WARNING  | 
[2024-11-01 00:09:26] [begin log extracts]
[2024-11-01 00:09:26] - Log from pilotlog.txt -
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | INFO     | extracted standard info from prmon json
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | found no stored workdir sizes
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:09:26] 2024-10-31 23:09:12,413 | WARNING  | wrong length of table data, x=[1730416090.0], y=[1727.0] (must be same and length>=4)
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | ..............................
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . Timing measurements:
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . get job = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . initial setup = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . payload setup = 3 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . stage-in = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . payload execution = 54 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . stage-out = 4 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | . log creation = 0 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | ..............................
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:09:26] 2024-10-31 23:09:12,414 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385647992/pilotlog.txt
[2024-11-01 00:09:26] [end log extracts]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,421 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2024-11-01 00:09:26] 2024-10-31 23:09:12,421 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:08:59,322 CRITICAL Transform executor raised TransformValidationExcep
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | 
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | job summary report
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | --------------------------------------------------
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | PanDA job id: 6385647992
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | task id: 41843948
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:08:59,322 CRITICAL Transform executor raised TransformValidationExceptio
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | error 2/2: 1165: Local output file is missing
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | pilot state: failed 
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | transexitcode: 65
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | exeerrorcode: 65
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: "IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'"
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | exitcode: 65
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: "IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'"
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | cpuconsumptiontime: 19 s
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | nevents: 0
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | neventsw: 0
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | pid: 4025591
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | pgrp: 4025591
[2024-11-01 00:09:26] 2024-10-31 23:09:12,458 | INFO     | corecount: 8
[2024-11-01 00:09:26] 2024-10-31 23:09:12,459 | INFO     | event service: False
[2024-11-01 00:09:26] 2024-10-31 23:09:12,459 | INFO     | sizes: {0: 2413180, 2: 2413386, 11: 2413414, 62: 2440008, 65: 2440008, 66: 2440036, 67: 2440136, 68: 2440334}
[2024-11-01 00:09:26] 2024-10-31 23:09:12,459 | INFO     | --------------------------------------------------
[2024-11-01 00:09:26] 2024-10-31 23:09:12,459 | INFO     | 
[2024-11-01 00:09:26] 2024-10-31 23:09:12,459 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,468 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,469 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-01 00:09:26] 2024-10-31 23:09:12,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,469 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-01 00:09:26] 2024-10-31 23:09:12,469 | INFO     | job 6385647992 has completed (purged errors)
[2024-11-01 00:09:26] 2024-10-31 23:09:12,469 | INFO     | overall cleanup function is called
[2024-11-01 00:09:26] 2024-10-31 23:09:13,475 | INFO     | --- collectZombieJob: --- 10, [4025591]
[2024-11-01 00:09:26] 2024-10-31 23:09:13,475 | INFO     | zombie collector waiting for pid 4025591
[2024-11-01 00:09:26] 2024-10-31 23:09:13,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-01 00:09:26] 2024-10-31 23:09:13,475 | INFO     | collected zombie processes
[2024-11-01 00:09:26] 2024-10-31 23:09:13,475 | INFO     | will attempt to kill all subprocesses of pid=4025591
[2024-11-01 00:09:26] 2024-10-31 23:09:13,494 | INFO     | process IDs to be killed: [4025591] (in reverse order)
[2024-11-01 00:09:26] 2024-10-31 23:09:13,510 | WARNING  | found no corresponding commands to process id(s)
[2024-11-01 00:09:26] 2024-10-31 23:09:13,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-01 00:09:26] 2024-10-31 23:09:13,511 | INFO     | did not find any defunct processes belonging to 4025591
[2024-11-01 00:09:26] 2024-10-31 23:09:13,512 | INFO     | did not find any defunct processes belonging to 4025591
[2024-11-01 00:09:26] 2024-10-31 23:09:13,512 | INFO     | ready for new job
[2024-11-01 00:09:26] 2024-10-31 23:09:13,512 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-01 00:09:26] 2024-10-31 23:09:13,512 | INFO     | **************************************
[2024-11-01 00:09:26] 2024-10-31 23:09:13,512 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-01 00:09:26] 2024-10-31 23:09:13,512 | INFO     | **************************************
[2024-11-01 00:09:26] 2024-10-31 23:09:13,512 | INFO     | 
[2024-11-01 00:09:26] 2024-10-31 23:09:13,513 | INFO     | architecture information:
[2024-11-01 00:09:26] 2024-10-31 23:09:13,513 | INFO     | executing command: cat /etc/os-release
[2024-11-01 00:09:26] 2024-10-31 23:09:13,519 | INFO     | cat /etc/os-release:
[2024-11-01 00:09:26] NAME="CentOS Linux"
[2024-11-01 00:09:26] VERSION="7 (Core)"
[2024-11-01 00:09:26] ID="centos"
[2024-11-01 00:09:26] ID_LIKE="rhel fedora"
[2024-11-01 00:09:26] VERSION_ID="7"
[2024-11-01 00:09:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-01 00:09:26] ANSI_COLOR="0;31"
[2024-11-01 00:09:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-01 00:09:26] HOME_URL="https://www.centos.org/"
[2024-11-01 00:09:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-01 00:09:26] 
[2024-11-01 00:09:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-01 00:09:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-01 00:09:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-01 00:09:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-01 00:09:26] 
[2024-11-01 00:09:26] 2024-10-31 23:09:13,519 | INFO     | **************************************
[2024-11-01 00:09:26] 2024-10-31 23:09:14,022 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2024-11-01 00:09:26] 2024-10-31 23:09:14,032 | INFO     | sufficient remaining disk space (152878186496 B)
[2024-11-01 00:09:26] 2024-10-31 23:09:14,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-01 00:09:26] 2024-10-31 23:09:14,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-01 00:09:26] 2024-10-31 23:09:14,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-01 00:09:26] 2024-10-31 23:09:14,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-01 00:09:26] 2024-10-31 23:09:14,245 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-11-01 00:09:26] 2024-10-31 23:09:14,245 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-11-01 00:09:26] 2024-10-31 23:09:14,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-01 00:09:26] 2024-10-31 23:09:14,245 | INFO     | will abort loop
[2024-11-01 00:09:26] 2024-10-31 23:09:14,869 | INFO     | all data control threads have been joined
[2024-11-01 00:09:26] 2024-10-31 23:09:14,871 | INFO     | all payload control threads have been joined
[2024-11-01 00:09:26] 2024-10-31 23:09:15,035 | INFO     | found 0 job(s) in 20 queues
[2024-11-01 00:09:26] 2024-10-31 23:09:15,035 | INFO     | [job] queue monitor thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:15,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-01 00:09:26] 2024-10-31 23:09:15,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-01 00:09:26] 2024-10-31 23:09:15,038 | INFO     | [job] retrieve thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:15,250 | INFO     | [job] job monitor thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:15,332 | INFO     | [payload] failed_post thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:15,708 | INFO     | all job control threads have been joined
[2024-11-01 00:09:26] 2024-10-31 23:09:15,874 | INFO     | [data] control thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:15,876 | INFO     | [payload] control thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:16,038 | INFO     | [data] copytool_out thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:16,141 | INFO     | [payload] execute_payloads thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:16,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-01 00:09:26] 2024-10-31 23:09:16,183 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:16,317 | INFO     | [job] validate thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:16,405 | INFO     | [payload] validate_post thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:16,415 | INFO     | [job] create_data_payload thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:16,459 | INFO     | [data] copytool_in thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:16,481 | INFO     | [payload] validate_pre thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:16,713 | INFO     | [job] control thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:20,166 | INFO     | [data] queue_monitor thread has finished
[2024-11-01 00:09:26] 2024-10-31 23:09:21,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075769861952)>', '<ExcThread(monitor, started 140075207726848)>']
[2024-11-01 00:09:26] 2024-10-31 23:09:22,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-01 00:09:26] 2024-10-31 23:09:22,071 | INFO     | [monitor] control thread has ended
[2024-11-01 00:09:26] 2024-10-31 23:09:26,848 | INFO     | all workflow threads have been joined
[2024-11-01 00:09:26] 2024-10-31 23:09:26,848 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-01 00:09:26] 2024-10-31 23:09:26,848 | INFO     | traces error code: 0
[2024-11-01 00:09:26] 2024-10-31 23:09:26,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-01 00:09:26] 2024-10-31 23:09:26,904 [wrapper] ==== pilot stdout END ====
[2024-11-01 00:09:26] 2024-10-31 23:09:26,911 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-01 00:09:26] 2024-10-31 23:09:26,912 [wrapper] pilotpid: 4018287
[2024-11-01 00:09:26] 2024-10-31 23:09:26,914 [wrapper] Pilot exit status: 0
[2024-11-01 00:09:26] 2024-10-31 23:09:26,917 [wrapper] pandaids: 6385647992
[2024-11-01 00:09:26] 2024-10-31 23:09:26,928 [wrapper] cleanup supervisor_pilot 4018293 4018288
[2024-11-01 00:09:26] 2024-10-31 23:09:26,929 [wrapper] Test setup, not cleaning
[2024-11-01 00:09:26] 2024-10-31 23:09:26,931 [wrapper] ==== wrapper stdout END ====
[2024-11-01 00:09:26] 2024-10-31 23:09:26,932 [wrapper] ==== wrapper stderr END ====
[2024-11-01 00:09:26] 2024-10-31 23:09:26,934 [wrapper] apfmon messages muted
[2024-11-01 00:09:26]  *** Error codes and diagnostics ***
[2024-11-01 00:09:26]     "exeErrorCode": 65,
[2024-11-01 00:09:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'\"",
[2024-11-01 00:09:26]     "pilotErrorCode": 1305,
[2024-11-01 00:09:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:08:59,322 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'\"",
[2024-11-01 00:09:26]  *** Listing of results directory ***
[2024-11-01 00:09:26] total 373388
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc    486088 Oct 31 23:16 pilot3.tar.gz
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc      5652 Oct 31 23:24 queuedata.json
[2024-11-01 00:09:26] -rwx------. 1 boinc boinc     34589 Oct 31 23:27 runpilot2-wrapper.sh
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc       100 Nov  1 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-01 00:09:26] -rwxr-xr-x. 1 boinc boinc      7986 Nov  1 00:07 run_atlas
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc       105 Nov  1 00:07 job.xml
[2024-11-01 00:09:26] -rw-r--r--. 2 boinc boinc     17569 Nov  1 00:07 start_atlas.sh
[2024-11-01 00:09:26] drwxrwx--x. 2 boinc boinc        68 Nov  1 00:07 shared
[2024-11-01 00:09:26] -rw-r--r--. 2 boinc boinc    499926 Nov  1 00:07 input.tar.gz
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc      6284 Nov  1 00:07 init_data.xml
[2024-11-01 00:09:26] -rw-r--r--. 2 boinc boinc 378297754 Nov  1 00:07 EVNT.41779523._000010.pool.root.1
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc         0 Nov  1 00:07 boinc_lockfile
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc      2889 Nov  1 00:07 pandaJob.out
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc       424 Nov  1 00:07 setup.sh.local
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc   1030011 Nov  1 00:07 agis_schedconf.cvmfs.json
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc   1602446 Nov  1 00:07 agis_ddmendpoints.agis.ALL.json
[2024-11-01 00:09:26] drwx------. 4 boinc boinc      4096 Nov  1 00:07 pilot3
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc       523 Nov  1 00:08 boinc_task_state.xml
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc        95 Nov  1 00:08 pilot_heartbeat.json
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc      8192 Nov  1 00:08 boinc_mmap_file
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc        22 Nov  1 00:08 wrapper_checkpoint.txt
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc       950 Nov  1 00:09 memory_monitor_summary.json
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc     29766 Nov  1 00:09 log.41843948._001377.job.log.tgz.1
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc      8510 Nov  1 00:09 heartbeat.json
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc      4403 Nov  1 00:09 pilotlog.txt
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc     69590 Nov  1 00:09 log.41843948._001377.job.log.1
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc       186 Nov  1 00:09 output.list
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc       620 Nov  1 00:09 runtime_log
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc    122880 Nov  1 00:09 result.tar.gz
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc       635 Nov  1 00:09 XSjMDmqosQ6n7OlckoGmwREmGgkVDo1bjSoqOlfODmiFULDmJicQcm.diag
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc     10890 Nov  1 00:09 runtime_log.err
[2024-11-01 00:09:26] -rw-r--r--. 1 boinc boinc     22030 Nov  1 00:09 stderr.txt
[2024-11-01 00:09:26] No HITS result produced
[2024-11-01 00:09:26]  *** Contents of shared directory: ***
[2024-11-01 00:09:26] total 370064
[2024-11-01 00:09:26] -rw-r--r--. 2 boinc boinc     17569 Nov  1 00:07 start_atlas.sh
[2024-11-01 00:09:26] -rw-r--r--. 2 boinc boinc    499926 Nov  1 00:07 input.tar.gz
[2024-11-01 00:09:26] -rw-r--r--. 2 boinc boinc 378297754 Nov  1 00:07 ATLAS.root_0
[2024-11-01 00:09:26] -rw-------. 1 boinc boinc    122880 Nov  1 00:09 result.tar.gz
00:09:28 (4014594): run_atlas exited; CPU time 20.091415
00:09:28 (4014594): called boinc_finish(0)

</stderr_txt>
]]>

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