Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:59:03 (3934168): wrapper (7.7.26015): starting
23:59:03 (3934168): wrapper: running run_atlas (--nthreads 8)
[2024-10-31 23:59:03] Arguments: --nthreads 8
[2024-10-31 23:59:03] Threads: 8
[2024-10-31 23:59:03] Checking for CVMFS
[2024-10-31 23:59:03] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-31 23:59:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-31 23:59:03] Running cvmfs_config stat atlas.cern.ch
[2024-10-31 23:59:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-31 23:59:03] 2.11.5.0 678199 4266 95076 138959 0 86 3638851 4097025 0 130560 0 122497458 100.000 913113 72097 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2024-10-31 23:59:03] CVMFS is ok
[2024-10-31 23:59:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-31 23:59:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-31 23:59:03] Further information can be found at the LHC@home message board.
[2024-10-31 23:59:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-31 23:59:03] Checking for apptainer binary...
[2024-10-31 23:59:03] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2024-10-31 23:59:03] apptainer is not installed, using version from CVMFS
[2024-10-31 23:59:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-31 23:59:03] pckeatlas02
[2024-10-31 23:59:03] apptainer works
[2024-10-31 23:59:03] Set ATHENA_PROC_NUMBER=8
[2024-10-31 23:59:03] Set ATHENA_CORE_NUMBER=8
[2024-10-31 23:59:03] Starting ATLAS job with PandaID=6385627807
[2024-10-31 23:59:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-01 00:00:41]  *** The last 200 lines of the pilot log: ***
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | found no stored workdir sizes
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | WARNING  | wrong length of table data, x=[1730415565.0], y=[1235.0] (must be same and length>=4)
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | ..............................
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . Timing measurements:
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . get job = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . initial setup = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . payload setup = 2 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . stage-in = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . payload execution = 54 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . stage-out = 4 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . log creation = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | ..............................
[2024-11-01 00:00:41] 2024-10-31 23:00:27,371 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:00:41] 2024-10-31 23:00:27,371 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385627807/pilotlog.txt
[2024-11-01 00:00:41] 2024-10-31 23:00:27,377 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-11-01 00:00:41] - Log from pilotlog.txt -
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | INFO     | extracted standard info from prmon json
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | found no stored workdir sizes
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | WARNING  | wrong length of table data, x=[1730415565.0], y=[1235.0] (must be same and length>=4)
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | ..............................
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . Timing measurements:
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . get job = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . initial setup = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . payload setup = 2 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . stage-in = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . payload execution = 54 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . stage-out = 4 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . log creation = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | ..............................
[2024-11-01 00:00:41] 2024-10-31 23:00:27,371 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:00:41] 2024-10-31 23:00:27,371 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385627807/pilotlog.txt
[2024-11-01 00:00:41] 2024-10-31 23:00:27,377 | WARNING  | 
[2024-11-01 00:00:41] [begin log extracts]
[2024-11-01 00:00:41] - Log from pilotlog.txt -
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | INFO     | extracted standard info from prmon json
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | INFO     | extracted standard memory fields from prmon json
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | WARNING  | found no stored workdir sizes
[2024-11-01 00:00:41] 2024-10-31 23:00:27,369 | INFO     | will not add max space = 0 B to job metrics
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | WARNING  | wrong length of table data, x=[1730415565.0], y=[1235.0] (must be same and length>=4)
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | ..............................
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . Timing measurements:
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . get job = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . initial setup = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . payload setup = 2 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . stage-in = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . payload execution = 54 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . stage-out = 4 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | . log creation = 0 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,370 | INFO     | ..............................
[2024-11-01 00:00:41] 2024-10-31 23:00:27,371 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-11-01 00:00:41] 2024-10-31 23:00:27,371 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/19/PanDA_Pilot-6385627807/pilotlog.txt
[2024-11-01 00:00:41] [end log extracts]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,378 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2024-11-01 00:00:41] 2024-10-31 23:00:27,378 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:00:13,953 CRITICAL Transform executor raised TransformValidationExcep
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | 
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | job summary report
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | --------------------------------------------------
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | PanDA job id: 6385627807
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | task id: 41843716
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:00:13,953 CRITICAL Transform executor raised TransformValidationExceptio
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | error 2/2: 1165: Local output file is missing
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | pilot state: failed 
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | transexitcode: 65
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | exeerrorcode: 65
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: "IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'"
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | exitcode: 65
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: "IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'"
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | cpuconsumptiontime: 19 s
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | nevents: 0
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | neventsw: 0
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | pid: 3944933
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | pgrp: 3944933
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | corecount: 8
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | event service: False
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | sizes: {0: 2413273, 2: 2413479, 11: 2413507, 61: 2435868, 62: 2440160, 65: 2440160, 66: 2440316, 67: 2440288, 68: 2440486}
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | --------------------------------------------------
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | 
[2024-11-01 00:00:41] 2024-10-31 23:00:27,415 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-01 00:00:41] 2024-10-31 23:00:27,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,426 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-01 00:00:41] 2024-10-31 23:00:27,426 | INFO     | job 6385627807 has completed (purged errors)
[2024-11-01 00:00:41] 2024-10-31 23:00:27,426 | INFO     | overall cleanup function is called
[2024-11-01 00:00:41] 2024-10-31 23:00:28,432 | INFO     | --- collectZombieJob: --- 10, [3944933]
[2024-11-01 00:00:41] 2024-10-31 23:00:28,432 | INFO     | zombie collector waiting for pid 3944933
[2024-11-01 00:00:41] 2024-10-31 23:00:28,432 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-01 00:00:41] 2024-10-31 23:00:28,432 | INFO     | collected zombie processes
[2024-11-01 00:00:41] 2024-10-31 23:00:28,432 | INFO     | will attempt to kill all subprocesses of pid=3944933
[2024-11-01 00:00:41] 2024-10-31 23:00:28,451 | INFO     | process IDs to be killed: [3944933] (in reverse order)
[2024-11-01 00:00:41] 2024-10-31 23:00:28,466 | WARNING  | found no corresponding commands to process id(s)
[2024-11-01 00:00:41] 2024-10-31 23:00:28,466 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-01 00:00:41] 2024-10-31 23:00:28,467 | INFO     | did not find any defunct processes belonging to 3944933
[2024-11-01 00:00:41] 2024-10-31 23:00:28,468 | INFO     | did not find any defunct processes belonging to 3944933
[2024-11-01 00:00:41] 2024-10-31 23:00:28,468 | INFO     | ready for new job
[2024-11-01 00:00:41] 2024-10-31 23:00:28,468 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-01 00:00:41] 2024-10-31 23:00:28,469 | INFO     | **************************************
[2024-11-01 00:00:41] 2024-10-31 23:00:28,469 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-01 00:00:41] 2024-10-31 23:00:28,469 | INFO     | **************************************
[2024-11-01 00:00:41] 2024-10-31 23:00:28,469 | INFO     | 
[2024-11-01 00:00:41] 2024-10-31 23:00:28,481 | INFO     | architecture information:
[2024-11-01 00:00:41] 2024-10-31 23:00:28,481 | INFO     | executing command: cat /etc/os-release
[2024-11-01 00:00:41] 2024-10-31 23:00:28,488 | INFO     | cat /etc/os-release:
[2024-11-01 00:00:41] NAME="CentOS Linux"
[2024-11-01 00:00:41] VERSION="7 (Core)"
[2024-11-01 00:00:41] ID="centos"
[2024-11-01 00:00:41] ID_LIKE="rhel fedora"
[2024-11-01 00:00:41] VERSION_ID="7"
[2024-11-01 00:00:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-01 00:00:41] ANSI_COLOR="0;31"
[2024-11-01 00:00:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-01 00:00:41] HOME_URL="https://www.centos.org/"
[2024-11-01 00:00:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-01 00:00:41] 
[2024-11-01 00:00:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-01 00:00:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-01 00:00:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-01 00:00:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-01 00:00:41] 
[2024-11-01 00:00:41] 2024-10-31 23:00:28,488 | INFO     | **************************************
[2024-11-01 00:00:41] 2024-10-31 23:00:28,991 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2024-11-01 00:00:41] 2024-10-31 23:00:28,999 | INFO     | sufficient remaining disk space (152899158016 B)
[2024-11-01 00:00:41] 2024-10-31 23:00:29,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-01 00:00:41] 2024-10-31 23:00:29,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-01 00:00:41] 2024-10-31 23:00:29,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-01 00:00:41] 2024-10-31 23:00:29,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-01 00:00:41] 2024-10-31 23:00:29,000 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-11-01 00:00:41] 2024-10-31 23:00:29,000 | INFO     | found 0 job(s) in 20 queues
[2024-11-01 00:00:41] 2024-10-31 23:00:29,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-01 00:00:41] 2024-10-31 23:00:29,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-01 00:00:41] 2024-10-31 23:00:29,211 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-11-01 00:00:41] 2024-10-31 23:00:29,211 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-11-01 00:00:41] 2024-10-31 23:00:29,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-01 00:00:41] 2024-10-31 23:00:29,211 | INFO     | will abort loop
[2024-11-01 00:00:41] 2024-10-31 23:00:29,840 | INFO     | all payload control threads have been joined
[2024-11-01 00:00:41] 2024-10-31 23:00:29,845 | INFO     | all data control threads have been joined
[2024-11-01 00:00:41] 2024-10-31 23:00:30,005 | INFO     | [job] retrieve thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:30,005 | INFO     | [job] queue monitor thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:30,158 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:30,216 | INFO     | [job] job monitor thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:30,309 | INFO     | [payload] failed_post thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:30,665 | INFO     | all job control threads have been joined
[2024-11-01 00:00:41] 2024-10-31 23:00:30,844 | INFO     | [payload] control thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:30,851 | INFO     | [data] control thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:30,923 | INFO     | [payload] execute_payloads thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:31,005 | INFO     | [data] copytool_out thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:31,136 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-01 00:00:41] 2024-10-31 23:00:31,280 | INFO     | [job] validate thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:31,369 | INFO     | [payload] validate_post thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:31,381 | INFO     | [job] create_data_payload thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:31,447 | INFO     | [payload] validate_pre thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:31,456 | INFO     | [data] copytool_in thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:31,670 | INFO     | [job] control thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:35,141 | INFO     | [data] queue_monitor thread has finished
[2024-11-01 00:00:41] 2024-10-31 23:00:36,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656088692544)>', '<ExcThread(monitor, started 139655383066368)>']
[2024-11-01 00:00:41] 2024-10-31 23:00:37,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-01 00:00:41] 2024-10-31 23:00:37,041 | INFO     | [monitor] control thread has ended
[2024-11-01 00:00:41] 2024-10-31 23:00:41,823 | INFO     | all workflow threads have been joined
[2024-11-01 00:00:41] 2024-10-31 23:00:41,823 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-01 00:00:41] 2024-10-31 23:00:41,823 | INFO     | traces error code: 0
[2024-11-01 00:00:41] 2024-10-31 23:00:41,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-01 00:00:41] 2024-10-31 23:00:41,881 [wrapper] ==== pilot stdout END ====
[2024-11-01 00:00:41] 2024-10-31 23:00:41,883 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-01 00:00:41] 2024-10-31 23:00:41,884 [wrapper] pilotpid: 3937848
[2024-11-01 00:00:41] 2024-10-31 23:00:41,885 [wrapper] Pilot exit status: 0
[2024-11-01 00:00:41] 2024-10-31 23:00:41,888 [wrapper] pandaids: 6385627807
[2024-11-01 00:00:41] 2024-10-31 23:00:41,897 [wrapper] cleanup supervisor_pilot 3937854 3937849
[2024-11-01 00:00:41] 2024-10-31 23:00:41,898 [wrapper] Test setup, not cleaning
[2024-11-01 00:00:41] 2024-10-31 23:00:41,899 [wrapper] ==== wrapper stdout END ====
[2024-11-01 00:00:41] 2024-10-31 23:00:41,900 [wrapper] ==== wrapper stderr END ====
[2024-11-01 00:00:41] 2024-10-31 23:00:41,902 [wrapper] apfmon messages muted
[2024-11-01 00:00:41]  *** Error codes and diagnostics ***
[2024-11-01 00:00:41]     "exeErrorCode": 65,
[2024-11-01 00:00:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'\"",
[2024-11-01 00:00:41]     "pilotErrorCode": 1305,
[2024-11-01 00:00:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-11-01 00:00:13,953 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"IOError: [Errno 2] No such file or directory: 'PDGTABLE.MeV'\"",
[2024-11-01 00:00:41]  *** Listing of results directory ***
[2024-11-01 00:00:41] total 378568
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc      5652 Oct 31 23:15 queuedata.json
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc    486088 Oct 31 23:16 pilot3.tar.gz
[2024-11-01 00:00:41] -rwx------. 1 boinc boinc     34589 Oct 31 23:18 runpilot2-wrapper.sh
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc       100 Oct 31 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-01 00:00:41] -rwxr-xr-x. 1 boinc boinc      7986 Oct 31 23:59 run_atlas
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc       105 Oct 31 23:59 job.xml
[2024-11-01 00:00:41] -rw-r--r--. 2 boinc boinc     17569 Oct 31 23:59 start_atlas.sh
[2024-11-01 00:00:41] drwxrwx--x. 2 boinc boinc        68 Oct 31 23:59 shared
[2024-11-01 00:00:41] -rw-r--r--. 2 boinc boinc    499928 Oct 31 23:59 input.tar.gz
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc      6284 Oct 31 23:59 init_data.xml
[2024-11-01 00:00:41] -rw-r--r--. 2 boinc boinc 383595257 Oct 31 23:59 EVNT.41780292._000013.pool.root.1
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc         0 Oct 31 23:59 boinc_lockfile
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc      2899 Oct 31 23:59 pandaJob.out
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc       424 Oct 31 23:59 setup.sh.local
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc   1030011 Oct 31 23:59 agis_schedconf.cvmfs.json
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc   1602446 Oct 31 23:59 agis_ddmendpoints.agis.ALL.json
[2024-11-01 00:00:41] drwx------. 4 boinc boinc      4096 Oct 31 23:59 pilot3
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc       522 Oct 31 23:59 boinc_task_state.xml
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc        95 Nov  1 00:00 pilot_heartbeat.json
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc       955 Nov  1 00:00 memory_monitor_summary.json
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc     29793 Nov  1 00:00 log.41843716._008593.job.log.tgz.1
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc      8514 Nov  1 00:00 heartbeat.json
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc        21 Nov  1 00:00 wrapper_checkpoint.txt
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc      8192 Nov  1 00:00 boinc_mmap_file
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc      4526 Nov  1 00:00 pilotlog.txt
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc     69789 Nov  1 00:00 log.41843716._008593.job.log.1
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc       186 Nov  1 00:00 output.list
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc       620 Nov  1 00:00 runtime_log
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc    122880 Nov  1 00:00 result.tar.gz
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc     10890 Nov  1 00:00 runtime_log.err
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc       635 Nov  1 00:00 laQMDmyfsQ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmEDVMDmfuijdm.diag
[2024-11-01 00:00:41] -rw-r--r--. 1 boinc boinc     22080 Nov  1 00:00 stderr.txt
[2024-11-01 00:00:41] No HITS result produced
[2024-11-01 00:00:41]  *** Contents of shared directory: ***
[2024-11-01 00:00:41] total 375240
[2024-11-01 00:00:41] -rw-r--r--. 2 boinc boinc     17569 Oct 31 23:59 start_atlas.sh
[2024-11-01 00:00:41] -rw-r--r--. 2 boinc boinc    499928 Oct 31 23:59 input.tar.gz
[2024-11-01 00:00:41] -rw-r--r--. 2 boinc boinc 383595257 Oct 31 23:59 ATLAS.root_0
[2024-11-01 00:00:41] -rw-------. 1 boinc boinc    122880 Nov  1 00:00 result.tar.gz
00:00:43 (3934168): run_atlas exited; CPU time 20.009409
00:00:43 (3934168): called boinc_finish(0)

</stderr_txt>
]]>

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