Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:38:00 (17455): wrapper (7.7.26015): starting
17:38:00 (17455): wrapper: running run_atlas (--nthreads 8)
[2024-10-31 17:38:00] Arguments: --nthreads 8
[2024-10-31 17:38:00] Threads: 8
[2024-10-31 17:38:00] Checking for CVMFS
[2024-10-31 17:38:01] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-31 17:38:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-31 17:38:01] Running cvmfs_config stat atlas.cern.ch
[2024-10-31 17:38:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-31 17:38:01] 2.11.2.0 4935 2646 170852 138957 0 145 10004796 18432001 23972 130560 0 29513031 98.946 79040119 56296 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-10-31 17:38:01] CVMFS is ok
[2024-10-31 17:38:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-31 17:38:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-31 17:38:01] Further information can be found at the LHC@home message board.
[2024-10-31 17:38:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-31 17:38:01] Checking for apptainer binary...
[2024-10-31 17:38:01] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-31 17:38:01] Running /usr/bin/apptainer --version
[2024-10-31 17:38:01] apptainer version 1.3.2-1.el7
[2024-10-31 17:38:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-31 17:38:04] c-212-11.aglt2.org
[2024-10-31 17:38:04] apptainer works
[2024-10-31 17:38:04] Set ATHENA_PROC_NUMBER=8
[2024-10-31 17:38:04] Set ATHENA_CORE_NUMBER=8
[2024-10-31 17:38:04] Starting ATLAS job with PandaID=6385577352
[2024-10-31 17:38:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-31 20:04:09]  *** The last 200 lines of the pilot log: ***
[2024-10-31 20:04:09] 2024-11-01 00:03:37,322 | INFO     | job 6385577352 has finished - writing final server update
[2024-10-31 20:04:09] 2024-11-01 00:03:37,322 | INFO     | total number of processed events: 100 (read)
[2024-10-31 20:04:09] 2024-11-01 00:03:37,327 | INFO     | executing command: lscpu
[2024-10-31 20:04:09] 2024-11-01 00:03:37,371 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-10-31 20:04:09] 2024-11-01 00:03:37,394 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-31 20:04:09] 2024-11-01 00:03:39,268 | INFO     | monitor loop #635: job 0:6385577352 is in state 'finished'
[2024-10-31 20:04:09] 2024-11-01 00:03:39,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 20:04:09] 2024-11-01 00:03:41,772 | INFO     | monitor loop #636: job 0:6385577352 is in state 'finished'
[2024-10-31 20:04:09] 2024-11-01 00:03:41,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 20:04:09] 2024-11-01 00:03:44,277 | INFO     | monitor loop #637: job 0:6385577352 is in state 'finished'
[2024-10-31 20:04:09] 2024-11-01 00:03:44,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 20:04:09] 2024-11-01 00:03:46,781 | INFO     | monitor loop #638: job 0:6385577352 is in state 'finished'
[2024-10-31 20:04:09] 2024-11-01 00:03:46,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 20:04:09] 2024-11-01 00:03:49,286 | INFO     | monitor loop #639: job 0:6385577352 is in state 'finished'
[2024-10-31 20:04:09] 2024-11-01 00:03:49,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 20:04:09] 2024-11-01 00:03:49,637 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-31 20:04:09] 2024-11-01 00:03:49,637 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6385577352/memory_monitor_summary.json (trf name=prmon)
[2024-10-31 20:04:09] 2024-11-01 00:03:49,638 | INFO     | extracted standard info from prmon json
[2024-10-31 20:04:09] 2024-11-01 00:03:49,638 | INFO     | extracted standard memory fields from prmon json
[2024-10-31 20:04:09] 2024-11-01 00:03:49,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-31 20:04:09] 2024-11-01 00:03:49,645 | INFO     | fitting pss+swap vs Time
[2024-10-31 20:04:09] 2024-11-01 00:03:49,645 | INFO     | model: linear, x: [1730410729.0, 1730410790.0, 1730410851.0, 1730410912.0, 1730410973.0, 1730411034.0, 1730411095.0, 1730411156.0, 1730411217.0, 1730411278.0, 1730
[2024-10-31 20:04:09] 2024-11-01 00:03:49,645 | INFO     | sum of square deviations: 906733332.2097901
[2024-10-31 20:04:09] 2024-11-01 00:03:49,646 | INFO     | sum of deviations: 125896511309.15384
[2024-10-31 20:04:09] 2024-11-01 00:03:49,646 | INFO     | mean x: 1730415060.3426573
[2024-10-31 20:04:09] 2024-11-01 00:03:49,646 | INFO     | mean y: 2057387.3846153845
[2024-10-31 20:04:09] 2024-11-01 00:03:49,646 | INFO     | -- intersect: -240259562512.51666
[2024-10-31 20:04:09] 2024-11-01 00:03:49,646 | INFO     | intersect: -240259562512.51666
[2024-10-31 20:04:09] 2024-11-01 00:03:49,646 | INFO     | chi2: 20.191477100742514
[2024-10-31 20:04:09] 2024-11-01 00:03:49,646 | INFO     | model: linear, x: [1730410729.0, 1730410790.0, 1730410851.0, 1730410912.0, 1730410973.0, 1730411034.0, 1730411095.0, 1730411156.0, 1730411217.0, 1730411278.0, 1730
[2024-10-31 20:04:09] 2024-11-01 00:03:49,646 | INFO     | sum of square deviations: 814923299.1014471
[2024-10-31 20:04:09] 2024-11-01 00:03:49,647 | INFO     | sum of deviations: 156619020635.18848
[2024-10-31 20:04:09] 2024-11-01 00:03:49,647 | INFO     | mean x: 1730414907.8550725
[2024-10-31 20:04:09] 2024-11-01 00:03:49,647 | INFO     | mean y: 2108478.15942029
[2024-10-31 20:04:09] 2024-11-01 00:03:49,647 | INFO     | -- intersect: -332564021928.98395
[2024-10-31 20:04:09] 2024-11-01 00:03:49,647 | INFO     | intersect: -332564021928.98395
[2024-10-31 20:04:09] 2024-11-01 00:03:49,647 | INFO     | chi2: 15.26011488752977
[2024-10-31 20:04:09] 2024-11-01 00:03:49,648 | INFO     | current chi2=15.26011488752977 (change=24.422988910659733 %)
[2024-10-31 20:04:09] 2024-11-01 00:03:49,648 | INFO     | right removable region: 137
[2024-10-31 20:04:09] 2024-11-01 00:03:49,648 | INFO     | model: linear, x: [1730411034.0, 1730411095.0, 1730411156.0, 1730411217.0, 1730411278.0, 1730411339.0, 1730411400.0, 1730411461.0, 1730411522.0, 1730411583.0, 1730
[2024-10-31 20:04:09] 2024-11-01 00:03:49,648 | INFO     | sum of square deviations: 814893409.1014471
[2024-10-31 20:04:09] 2024-11-01 00:03:49,652 | INFO     | sum of deviations: 91149070182.49275
[2024-10-31 20:04:09] 2024-11-01 00:03:49,653 | INFO     | mean x: 1730415212.8550725
[2024-10-31 20:04:09] 2024-11-01 00:03:49,653 | INFO     | mean y: 2114920.224637681
[2024-10-31 20:04:09] 2024-11-01 00:03:49,653 | INFO     | -- intersect: -193551711776.3227
[2024-10-31 20:04:09] 2024-11-01 00:03:49,653 | INFO     | intersect: -193551711776.3227
[2024-10-31 20:04:09] 2024-11-01 00:03:49,653 | INFO     | chi2: 17.42330888631781
[2024-10-31 20:04:09] 2024-11-01 00:03:49,653 | INFO     | current chi2=17.42330888631781 (change=13.709587469075798 %)
[2024-10-31 20:04:09] 2024-11-01 00:03:49,653 | INFO     | left removable region: 10
[2024-10-31 20:04:09] 2024-11-01 00:03:49,653 | INFO     | model: linear, x: [1730411339.0, 1730411400.0, 1730411461.0, 1730411522.0, 1730411583.0, 1730411644.0, 1730411705.0, 1730411766.0, 1730411827.0, 1730411888.0, 1730
[2024-10-31 20:04:09] 2024-11-01 00:03:49,653 | INFO     | sum of square deviations: 635147910.0944902
[2024-10-31 20:04:09] 2024-11-01 00:03:49,654 | INFO     | sum of deviations: 102072295067.28355
[2024-10-31 20:04:09] 2024-11-01 00:03:49,654 | INFO     | mean x: 1730415182.3858268
[2024-10-31 20:04:09] 2024-11-01 00:03:49,654 | INFO     | mean y: 2234586.157480315
[2024-10-31 20:04:09] 2024-11-01 00:03:49,654 | INFO     | -- intersect: -278086453541.8043
[2024-10-31 20:04:09] 2024-11-01 00:03:49,654 | INFO     | intersect: -278086453541.8043
[2024-10-31 20:04:09] 2024-11-01 00:03:49,654 | INFO     | chi2: 10.795143247910845
[2024-10-31 20:04:09] 2024-11-01 00:03:49,654 | INFO     | -- intersect: -278086453541.8043
[2024-10-31 20:04:09] 2024-11-01 00:03:49,654 | INFO     | current memory leak: 160.71 B/s (using 127 data points, chi2=10.80)
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | ..............................
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | . Timing measurements:
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | . get job = 0 s
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | . initial setup = 2 s
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | . payload setup = 7 s
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | . stage-in = 0 s
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | . payload execution = 8685 s
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | . stage-out = 1 s
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | . log creation = 0 s
[2024-10-31 20:04:09] 2024-11-01 00:03:49,655 | INFO     | ..............................
[2024-10-31 20:04:09] 2024-11-01 00:03:49,759 | INFO     | 
[2024-10-31 20:04:09] 2024-11-01 00:03:49,759 | INFO     | job summary report
[2024-10-31 20:04:09] 2024-11-01 00:03:49,759 | INFO     | --------------------------------------------------
[2024-10-31 20:04:09] 2024-11-01 00:03:49,759 | INFO     | PanDA job id: 6385577352
[2024-10-31 20:04:09] 2024-11-01 00:03:49,759 | INFO     | task id: 41843720
[2024-10-31 20:04:09] 2024-11-01 00:03:49,759 | INFO     | errors: (none)
[2024-10-31 20:04:09] 2024-11-01 00:03:49,759 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | pilot state: finished 
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | transexitcode: 0
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | exeerrorcode: 0
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | exeerrordiag: 
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | exitcode: 0
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | exitmsg: OK
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | cpuconsumptiontime: 21788 s
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | nevents: 100
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | neventsw: 0
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | pid: 38448
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | pgrp: 38448
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | corecount: 8
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | event service: False
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | sizes: {0: 2413030, 1: 2413229, 7: 2413435, 11: 2413463, 8696: 2442114, 8699: 2451134, 8703: 2451318, 8715: 2451540}
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | --------------------------------------------------
[2024-10-31 20:04:09] 2024-11-01 00:03:49,760 | INFO     | 
[2024-10-31 20:04:09] 2024-11-01 00:03:49,761 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-10-31 20:04:09] 2024-11-01 00:03:49,781 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,781 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,783 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,783 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-31 20:04:09] 2024-11-01 00:03:49,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,783 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-31 20:04:09] 2024-11-01 00:03:49,783 | INFO     | job 6385577352 has completed (purged errors)
[2024-10-31 20:04:09] 2024-11-01 00:03:49,783 | INFO     | overall cleanup function is called
[2024-10-31 20:04:09] 2024-11-01 00:03:50,795 | INFO     | --- collectZombieJob: --- 10, [38448]
[2024-10-31 20:04:09] 2024-11-01 00:03:50,796 | INFO     | zombie collector waiting for pid 38448
[2024-10-31 20:04:09] 2024-11-01 00:03:50,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-31 20:04:09] 2024-11-01 00:03:50,796 | INFO     | collected zombie processes
[2024-10-31 20:04:09] 2024-11-01 00:03:50,796 | INFO     | will attempt to kill all subprocesses of pid=38448
[2024-10-31 20:04:09] 2024-11-01 00:03:51,061 | INFO     | process IDs to be killed: [38448] (in reverse order)
[2024-10-31 20:04:09] 2024-11-01 00:03:51,202 | WARNING  | found no corresponding commands to process id(s)
[2024-10-31 20:04:09] 2024-11-01 00:03:51,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-31 20:04:09] 2024-11-01 00:03:51,217 | INFO     | did not find any defunct processes belonging to 38448
[2024-10-31 20:04:09] 2024-11-01 00:03:51,230 | INFO     | did not find any defunct processes belonging to 38448
[2024-10-31 20:04:09] 2024-11-01 00:03:51,231 | INFO     | ready for new job
[2024-10-31 20:04:09] 2024-11-01 00:03:51,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-31 20:04:09] 2024-11-01 00:03:51,232 | INFO     | **************************************
[2024-10-31 20:04:09] 2024-11-01 00:03:51,232 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-31 20:04:09] 2024-11-01 00:03:51,232 | INFO     | **************************************
[2024-10-31 20:04:09] 2024-11-01 00:03:51,232 | INFO     | 
[2024-10-31 20:04:09] 2024-11-01 00:03:51,237 | INFO     | architecture information:
[2024-10-31 20:04:09] 2024-11-01 00:03:51,240 | INFO     | executing command: cat /etc/os-release
[2024-10-31 20:04:09] 2024-11-01 00:03:51,263 | INFO     | cat /etc/os-release:
[2024-10-31 20:04:09] NAME="CentOS Linux"
[2024-10-31 20:04:09] VERSION="7 (Core)"
[2024-10-31 20:04:09] ID="centos"
[2024-10-31 20:04:09] ID_LIKE="rhel fedora"
[2024-10-31 20:04:09] VERSION_ID="7"
[2024-10-31 20:04:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-31 20:04:09] ANSI_COLOR="0;31"
[2024-10-31 20:04:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-31 20:04:09] HOME_URL="https://www.centos.org/"
[2024-10-31 20:04:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-31 20:04:09] 
[2024-10-31 20:04:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-31 20:04:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-31 20:04:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-31 20:04:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-31 20:04:09] 
[2024-10-31 20:04:09] 2024-11-01 00:03:51,263 | INFO     | **************************************
[2024-10-31 20:04:09] 2024-11-01 00:03:51,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-10-31 20:04:09] 2024-11-01 00:03:51,865 | INFO     | sufficient remaining disk space (102604210176 B)
[2024-10-31 20:04:09] 2024-11-01 00:03:51,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-31 20:04:09] 2024-11-01 00:03:51,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-31 20:04:09] 2024-11-01 00:03:51,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-31 20:04:09] 2024-11-01 00:03:52,124 | INFO     | all data control threads have been joined
[2024-10-31 20:04:09] 2024-11-01 00:03:52,254 | INFO     | all payload control threads have been joined
[2024-10-31 20:04:09] 2024-11-01 00:03:52,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-31 20:04:09] 2024-11-01 00:03:52,624 | INFO     | found 0 job(s) in 20 queues
[2024-10-31 20:04:09] 2024-11-01 00:03:52,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-31 20:04:09] 2024-11-01 00:03:52,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-31 20:04:09] 2024-11-01 00:03:52,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-31 20:04:09] 2024-11-01 00:03:52,796 | INFO     | aborting loop
[2024-10-31 20:04:09] 2024-11-01 00:03:52,870 | INFO     | [job] retrieve thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:52,961 | INFO     | [payload] validate_post thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:53,116 | INFO     | [payload] execute_payloads thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:53,129 | INFO     | [data] control thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:53,244 | INFO     | [payload] validate_pre thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:53,259 | INFO     | [payload] control thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:53,264 | INFO     | [payload] failed_post thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:53,427 | INFO     | all job control threads have been joined
[2024-10-31 20:04:09] 2024-11-01 00:03:53,578 | INFO     | [job] create_data_payload thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:53,800 | INFO     | [job] job monitor thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:53,871 | INFO     | [data] copytool_out thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:54,203 | INFO     | [data] copytool_in thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:54,361 | INFO     | [job] validate thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:54,431 | INFO     | [job] control thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:54,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-31 20:04:09] 2024-11-01 00:03:55,766 | INFO     | [job] queue monitor thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:03:56,344 | INFO     | [data] queue_monitor thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:04:02,614 | INFO     | job.realtimelogging is not enabled
[2024-10-31 20:04:09] 2024-11-01 00:04:03,620 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-31 20:04:09] 2024-11-01 00:04:04,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139775594063680)>', '<ExcThread(monitor, started 139775293257472)>']
[2024-10-31 20:04:09] 2024-11-01 00:04:04,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-31 20:04:09] 2024-11-01 00:04:04,686 | INFO     | [monitor] control thread has ended
[2024-10-31 20:04:09] 2024-11-01 00:04:09,080 | INFO     | all workflow threads have been joined
[2024-10-31 20:04:09] 2024-11-01 00:04:09,080 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-31 20:04:09] 2024-11-01 00:04:09,081 | INFO     | traces error code: 0
[2024-10-31 20:04:09] 2024-11-01 00:04:09,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-31 20:04:09] 2024-11-01 00:04:09,266 [wrapper] ==== pilot stdout END ====
[2024-10-31 20:04:09] 2024-11-01 00:04:09,268 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-31 20:04:09] 2024-11-01 00:04:09,270 [wrapper] pilotpid: 24808
[2024-10-31 20:04:09] 2024-11-01 00:04:09,272 [wrapper] Pilot exit status: 0
[2024-10-31 20:04:09] 2024-11-01 00:04:09,282 [wrapper] pandaids: 6385577352
[2024-10-31 20:04:09] 2024-11-01 00:04:09,373 [wrapper] cleanup supervisor_pilot 41365 24809
[2024-10-31 20:04:09] 2024-11-01 00:04:09,377 [wrapper] Test setup, not cleaning
[2024-10-31 20:04:09] 2024-11-01 00:04:09,380 [wrapper] ==== wrapper stdout END ====
[2024-10-31 20:04:09] 2024-11-01 00:04:09,382 [wrapper] ==== wrapper stderr END ====
[2024-10-31 20:04:09] 2024-11-01 00:04:09,417 [wrapper] apfmon messages muted
[2024-10-31 20:04:09]  *** Error codes and diagnostics ***
[2024-10-31 20:04:09]     "exeErrorCode": 0,
[2024-10-31 20:04:09]     "exeErrorDiag": "",
[2024-10-31 20:04:09]     "pilotErrorCode": 0,
[2024-10-31 20:04:09]     "pilotErrorDiag": "",
[2024-10-31 20:04:09]  *** Listing of results directory ***
[2024-10-31 20:04:09] total 441364
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas    486088 Oct 31 16:15 pilot3.tar.gz
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas      5652 Oct 31 16:59 queuedata.json
[2024-10-31 20:04:09] -rwx------ 1 boincer umatlas     34589 Oct 31 17:03 runpilot2-wrapper.sh
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas       100 Oct 31 17:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-31 20:04:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 31 17:38 run_atlas
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas       105 Oct 31 17:38 job.xml
[2024-10-31 20:04:09] -rw-r--r-- 2 boincer umatlas 353696443 Oct 31 17:38 EVNT.41780299._000006.pool.root.1
[2024-10-31 20:04:09] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 17:38 start_atlas.sh
[2024-10-31 20:04:09] drwxrwx--x 2 boincer umatlas      4096 Oct 31 17:38 shared
[2024-10-31 20:04:09] -rw-r--r-- 2 boincer umatlas    499911 Oct 31 17:38 input.tar.gz
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas         0 Oct 31 17:38 boinc_lockfile
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas      2849 Oct 31 17:38 pandaJob.out
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas       467 Oct 31 17:38 setup.sh.local
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas   1030011 Oct 31 17:38 agis_schedconf.cvmfs.json
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas   1602446 Oct 31 17:38 agis_ddmendpoints.agis.ALL.json
[2024-10-31 20:04:09] drwx------ 4 boincer umatlas      4096 Oct 31 17:38 pilot3
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas       530 Oct 31 19:49 boinc_task_state.xml
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas  90315499 Oct 31 20:03 HITS.41843720._004683.pool.root.1
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas      1087 Oct 31 20:03 memory_monitor_summary.json
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas      6388 Oct 31 20:03 init_data.xml
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas   1250212 Oct 31 20:03 log.41843720._004683.job.log.tgz.1
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas      8569 Oct 31 20:03 heartbeat.json
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas        95 Oct 31 20:03 pilot_heartbeat.json
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 31 20:04 boinc_mmap_file
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas        27 Oct 31 20:04 wrapper_checkpoint.txt
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas      4288 Oct 31 20:04 pilotlog.txt
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas    791553 Oct 31 20:04 log.41843720._004683.job.log.1
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas       353 Oct 31 20:04 output.list
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas       620 Oct 31 20:04 runtime_log
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas   2058240 Oct 31 20:04 result.tar.gz
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas     11418 Oct 31 20:04 runtime_log.err
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas       661 Oct 31 20:04 EKXLDmYVrQ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmdaUMDmcHGuTm.diag
[2024-10-31 20:04:09] -rw-r--r-- 1 boincer umatlas     21876 Oct 31 20:04 stderr.txt
[2024-10-31 20:04:09] HITS file was successfully produced:
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas 90315499 Oct 31 20:03 shared/HITS.pool.root.1
[2024-10-31 20:04:09]  *** Contents of shared directory: ***
[2024-10-31 20:04:09] total 436132
[2024-10-31 20:04:09] -rw-r--r-- 2 boincer umatlas 353696443 Oct 31 17:38 ATLAS.root_0
[2024-10-31 20:04:09] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 17:38 start_atlas.sh
[2024-10-31 20:04:09] -rw-r--r-- 2 boincer umatlas    499911 Oct 31 17:38 input.tar.gz
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas  90315499 Oct 31 20:03 HITS.pool.root.1
[2024-10-31 20:04:09] -rw------- 1 boincer umatlas   2058240 Oct 31 20:04 result.tar.gz
20:04:11 (17455): run_atlas exited; CPU time 20958.298268
20:04:11 (17455): called boinc_finish(0)

</stderr_txt>
]]>

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