Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:48:33 (42846): wrapper (7.7.26015): starting
16:48:33 (42846): wrapper: running run_atlas (--nthreads 8)
[2024-10-31 16:48:33] Arguments: --nthreads 8
[2024-10-31 16:48:33] Threads: 8
[2024-10-31 16:48:33] Checking for CVMFS
[2024-10-31 16:48:34] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-31 16:48:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-31 16:48:34] Running cvmfs_config stat atlas.cern.ch
[2024-10-31 16:48:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-31 16:48:34] 2.11.2.0 294477 1940 239364 138956 0 328 14130783 18432000 21507 130560 0 17040830 99.433 27308297 38794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-10-31 16:48:34] CVMFS is ok
[2024-10-31 16:48:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-31 16:48:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-31 16:48:34] Further information can be found at the LHC@home message board.
[2024-10-31 16:48:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-31 16:48:34] Checking for apptainer binary...
[2024-10-31 16:48:34] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-31 16:48:34] Running /usr/bin/apptainer --version
[2024-10-31 16:48:34] apptainer version 1.3.2-1.el7
[2024-10-31 16:48:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-31 16:48:35] c-211-35-1.aglt2.org
[2024-10-31 16:48:35] apptainer works
[2024-10-31 16:48:35] Set ATHENA_PROC_NUMBER=8
[2024-10-31 16:48:35] Set ATHENA_CORE_NUMBER=8
[2024-10-31 16:48:36] Starting ATLAS job with PandaID=6385533957
[2024-10-31 16:48:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-31 19:26:14]  *** The last 200 lines of the pilot log: ***
[2024-10-31 19:26:14] 2024-10-31 23:25:42,086 | INFO     | monitor loop #659: job 0:6385533957 is in state 'finished'
[2024-10-31 19:26:14] 2024-10-31 23:25:42,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 19:26:14] 2024-10-31 23:25:43,967 | INFO     | 9411s have passed since pilot start
[2024-10-31 19:26:14] 2024-10-31 23:25:44,591 | INFO     | monitor loop #660: job 0:6385533957 is in state 'finished'
[2024-10-31 19:26:14] 2024-10-31 23:25:44,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 19:26:14] 2024-10-31 23:25:47,096 | INFO     | monitor loop #661: job 0:6385533957 is in state 'finished'
[2024-10-31 19:26:14] 2024-10-31 23:25:47,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 19:26:14] 2024-10-31 23:25:49,601 | INFO     | monitor loop #662: job 0:6385533957 is in state 'finished'
[2024-10-31 19:26:14] 2024-10-31 23:25:49,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 19:26:14] 2024-10-31 23:25:52,105 | INFO     | monitor loop #663: job 0:6385533957 is in state 'finished'
[2024-10-31 19:26:14] 2024-10-31 23:25:52,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 19:26:14] 2024-10-31 23:25:54,610 | INFO     | monitor loop #664: job 0:6385533957 is in state 'finished'
[2024-10-31 19:26:14] 2024-10-31 23:25:54,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 19:26:14] 2024-10-31 23:25:56,986 | INFO     | CPU arch script returned: x86-64-v4
[2024-10-31 19:26:14] 2024-10-31 23:25:56,986 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6385533957/memory_monitor_summary.json (trf name=prmon)
[2024-10-31 19:26:14] 2024-10-31 23:25:56,987 | INFO     | extracted standard info from prmon json
[2024-10-31 19:26:14] 2024-10-31 23:25:56,987 | INFO     | extracted standard memory fields from prmon json
[2024-10-31 19:26:14] 2024-10-31 23:25:56,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-31 19:26:14] 2024-10-31 23:25:56,992 | INFO     | fitting pss+swap vs Time
[2024-10-31 19:26:14] 2024-10-31 23:25:56,993 | INFO     | model: linear, x: [1730407848.0, 1730407909.0, 1730407970.0, 1730408031.0, 1730408092.0, 1730408153.0, 1730408214.0, 1730408275.0, 1730408336.0, 1730408397.0, 1730
[2024-10-31 19:26:14] 2024-10-31 23:25:56,993 | INFO     | sum of square deviations: 1110699629.8823586
[2024-10-31 19:26:14] 2024-10-31 23:25:56,998 | INFO     | sum of deviations: 107300072856.99998
[2024-10-31 19:26:14] 2024-10-31 23:25:56,998 | INFO     | mean x: 1730412485.1176472
[2024-10-31 19:26:14] 2024-10-31 23:25:56,998 | INFO     | mean y: 1805108.111111111
[2024-10-31 19:26:14] 2024-10-31 23:25:56,998 | INFO     | -- intersect: -167166149873.06757
[2024-10-31 19:26:14] 2024-10-31 23:25:56,998 | INFO     | intersect: -167166149873.06757
[2024-10-31 19:26:14] 2024-10-31 23:25:56,999 | INFO     | chi2: 36.099729263453156
[2024-10-31 19:26:14] 2024-10-31 23:25:56,999 | INFO     | model: linear, x: [1730407848.0, 1730407909.0, 1730407970.0, 1730408031.0, 1730408092.0, 1730408153.0, 1730408214.0, 1730408275.0, 1730408336.0, 1730408397.0, 1730
[2024-10-31 19:26:14] 2024-10-31 23:25:56,999 | INFO     | sum of square deviations: 1005391663.425672
[2024-10-31 19:26:14] 2024-10-31 23:25:57,000 | INFO     | sum of deviations: 137073795531.4999
[2024-10-31 19:26:14] 2024-10-31 23:25:57,000 | INFO     | mean x: 1730412332.6554055
[2024-10-31 19:26:14] 2024-10-31 23:25:57,000 | INFO     | mean y: 1848166.5
[2024-10-31 19:26:14] 2024-10-31 23:25:57,000 | INFO     | -- intersect: -235920325151.90692
[2024-10-31 19:26:14] 2024-10-31 23:25:57,000 | INFO     | intersect: -235920325151.90692
[2024-10-31 19:26:14] 2024-10-31 23:25:57,001 | INFO     | chi2: 29.711228444957055
[2024-10-31 19:26:14] 2024-10-31 23:25:57,005 | INFO     | current chi2=29.711228444957055 (change=17.696810887065926 %)
[2024-10-31 19:26:14] 2024-10-31 23:25:57,005 | INFO     | right removable region: 147
[2024-10-31 19:26:14] 2024-10-31 23:25:57,006 | INFO     | model: linear, x: [1730408153.0, 1730408214.0, 1730408275.0, 1730408336.0, 1730408397.0, 1730408458.0, 1730408519.0, 1730408580.0, 1730408641.0, 1730408702.0, 1730
[2024-10-31 19:26:14] 2024-10-31 23:25:57,006 | INFO     | sum of square deviations: 1005287353.425672
[2024-10-31 19:26:14] 2024-10-31 23:25:57,007 | INFO     | sum of deviations: 71808900630.41223
[2024-10-31 19:26:14] 2024-10-31 23:25:57,011 | INFO     | mean x: 1730412637.6554055
[2024-10-31 19:26:14] 2024-10-31 23:25:57,011 | INFO     | mean y: 1856408.0472972973
[2024-10-31 19:26:14] 2024-10-31 23:25:57,011 | INFO     | -- intersect: -123603626863.55132
[2024-10-31 19:26:14] 2024-10-31 23:25:57,011 | INFO     | intersect: -123603626863.55132
[2024-10-31 19:26:14] 2024-10-31 23:25:57,012 | INFO     | chi2: 32.318775424140206
[2024-10-31 19:26:14] 2024-10-31 23:25:57,012 | INFO     | current chi2=32.318775424140206 (change=10.473634889945652 %)
[2024-10-31 19:26:14] 2024-10-31 23:25:57,012 | INFO     | left removable region: 10
[2024-10-31 19:26:14] 2024-10-31 23:25:57,012 | INFO     | model: linear, x: [1730408458.0, 1730408519.0, 1730408580.0, 1730408641.0, 1730408702.0, 1730408763.0, 1730408824.0, 1730408885.0, 1730408946.0, 1730409007.0, 1730
[2024-10-31 19:26:14] 2024-10-31 23:25:57,012 | INFO     | sum of square deviations: 797409219.5620447
[2024-10-31 19:26:14] 2024-10-31 23:25:57,013 | INFO     | sum of deviations: 73444964451.54749
[2024-10-31 19:26:14] 2024-10-31 23:25:57,013 | INFO     | mean x: 1730412607.2481751
[2024-10-31 19:26:14] 2024-10-31 23:25:57,013 | INFO     | mean y: 1970210.1897810218
[2024-10-31 19:26:14] 2024-10-31 23:25:57,013 | INFO     | -- intersect: -159376789538.3526
[2024-10-31 19:26:14] 2024-10-31 23:25:57,013 | INFO     | intersect: -159376789538.3526
[2024-10-31 19:26:14] 2024-10-31 23:25:57,014 | INFO     | chi2: 21.99020489373082
[2024-10-31 19:26:14] 2024-10-31 23:25:57,014 | INFO     | -- intersect: -159376789538.3526
[2024-10-31 19:26:14] 2024-10-31 23:25:57,014 | INFO     | current memory leak: 92.10 B/s (using 137 data points, chi2=21.99)
[2024-10-31 19:26:14] 2024-10-31 23:25:57,015 | INFO     | ..............................
[2024-10-31 19:26:14] 2024-10-31 23:25:57,015 | INFO     | . Timing measurements:
[2024-10-31 19:26:14] 2024-10-31 23:25:57,019 | INFO     | . get job = 0 s
[2024-10-31 19:26:14] 2024-10-31 23:25:57,019 | INFO     | . initial setup = 2 s
[2024-10-31 19:26:14] 2024-10-31 23:25:57,019 | INFO     | . payload setup = 45 s
[2024-10-31 19:26:14] 2024-10-31 23:25:57,019 | INFO     | . stage-in = 0 s
[2024-10-31 19:26:14] 2024-10-31 23:25:57,019 | INFO     | . payload execution = 9322 s
[2024-10-31 19:26:14] 2024-10-31 23:25:57,020 | INFO     | . stage-out = 2 s
[2024-10-31 19:26:14] 2024-10-31 23:25:57,020 | INFO     | . log creation = 1 s
[2024-10-31 19:26:14] 2024-10-31 23:25:57,020 | INFO     | ..............................
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | 
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | job summary report
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | --------------------------------------------------
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | PanDA job id: 6385533957
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | task id: 41843725
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | errors: (none)
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | pilot state: finished 
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | transexitcode: 0
[2024-10-31 19:26:14] 2024-10-31 23:25:57,139 | INFO     | exeerrorcode: 0
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | exeerrordiag: 
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | exitcode: 0
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | exitmsg: OK
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | cpuconsumptiontime: 15570 s
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | nevents: 50
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | neventsw: 0
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | pid: 77290
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | pgrp: 77290
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | corecount: 8
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | event service: False
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | sizes: {0: 2413036, 1: 2413235, 9: 2413441, 11: 2413469, 9371: 2442496, 9372: 2442495, 9377: 2451699, 9379: 2451755, 9398: 2451977}
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | --------------------------------------------------
[2024-10-31 19:26:14] 2024-10-31 23:25:57,140 | INFO     | 
[2024-10-31 19:26:14] 2024-10-31 23:25:57,141 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-10-31 19:26:14] 2024-10-31 23:25:57,176 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,177 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,177 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,177 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | job 6385533957 has completed (purged errors)
[2024-10-31 19:26:14] 2024-10-31 23:25:57,178 | INFO     | overall cleanup function is called
[2024-10-31 19:26:14] 2024-10-31 23:25:58,205 | INFO     | --- collectZombieJob: --- 10, [77290]
[2024-10-31 19:26:14] 2024-10-31 23:25:58,205 | INFO     | zombie collector waiting for pid 77290
[2024-10-31 19:26:14] 2024-10-31 23:25:58,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-31 19:26:14] 2024-10-31 23:25:58,205 | INFO     | collected zombie processes
[2024-10-31 19:26:14] 2024-10-31 23:25:58,206 | INFO     | will attempt to kill all subprocesses of pid=77290
[2024-10-31 19:26:14] 2024-10-31 23:25:58,442 | INFO     | process IDs to be killed: [77290] (in reverse order)
[2024-10-31 19:26:14] 2024-10-31 23:25:58,648 | WARNING  | found no corresponding commands to process id(s)
[2024-10-31 19:26:14] 2024-10-31 23:25:58,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-31 19:26:14] 2024-10-31 23:25:58,660 | INFO     | did not find any defunct processes belonging to 77290
[2024-10-31 19:26:14] 2024-10-31 23:25:58,672 | INFO     | did not find any defunct processes belonging to 77290
[2024-10-31 19:26:14] 2024-10-31 23:25:58,672 | INFO     | ready for new job
[2024-10-31 19:26:14] 2024-10-31 23:25:58,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-31 19:26:14] 2024-10-31 23:25:58,674 | INFO     | **************************************
[2024-10-31 19:26:14] 2024-10-31 23:25:58,674 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-31 19:26:14] 2024-10-31 23:25:58,674 | INFO     | **************************************
[2024-10-31 19:26:14] 2024-10-31 23:25:58,674 | INFO     | 
[2024-10-31 19:26:14] 2024-10-31 23:25:58,677 | INFO     | architecture information:
[2024-10-31 19:26:14] 2024-10-31 23:25:58,678 | INFO     | executing command: cat /etc/os-release
[2024-10-31 19:26:14] 2024-10-31 23:25:58,754 | INFO     | cat /etc/os-release:
[2024-10-31 19:26:14] NAME="CentOS Linux"
[2024-10-31 19:26:14] VERSION="7 (Core)"
[2024-10-31 19:26:14] ID="centos"
[2024-10-31 19:26:14] ID_LIKE="rhel fedora"
[2024-10-31 19:26:14] VERSION_ID="7"
[2024-10-31 19:26:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-31 19:26:14] ANSI_COLOR="0;31"
[2024-10-31 19:26:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-31 19:26:14] HOME_URL="https://www.centos.org/"
[2024-10-31 19:26:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-31 19:26:14] 
[2024-10-31 19:26:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-31 19:26:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-31 19:26:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-31 19:26:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-31 19:26:14] 
[2024-10-31 19:26:14] 2024-10-31 23:25:58,754 | INFO     | **************************************
[2024-10-31 19:26:14] 2024-10-31 23:25:59,256 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-10-31 19:26:14] 2024-10-31 23:25:59,349 | INFO     | sufficient remaining disk space (102317948928 B)
[2024-10-31 19:26:14] 2024-10-31 23:25:59,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-31 19:26:14] 2024-10-31 23:25:59,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-31 19:26:14] 2024-10-31 23:25:59,353 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-31 19:26:14] 2024-10-31 23:25:59,353 | INFO     | found 0 job(s) in 20 queues
[2024-10-31 19:26:14] 2024-10-31 23:25:59,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-31 19:26:14] 2024-10-31 23:25:59,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-31 19:26:14] 2024-10-31 23:25:59,409 | INFO     | all data control threads have been joined
[2024-10-31 19:26:14] 2024-10-31 23:25:59,628 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-31 19:26:14] 2024-10-31 23:25:59,628 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-31 19:26:14] 2024-10-31 23:25:59,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-31 19:26:14] 2024-10-31 23:25:59,629 | INFO     | will abort loop
[2024-10-31 19:26:14] 2024-10-31 23:25:59,676 | INFO     | all job control threads have been joined
[2024-10-31 19:26:14] 2024-10-31 23:26:00,253 | INFO     | all payload control threads have been joined
[2024-10-31 19:26:14] 2024-10-31 23:26:00,354 | INFO     | [job] retrieve thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:00,415 | INFO     | [data] control thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:00,494 | INFO     | [data] copytool_in thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:00,633 | INFO     | [job] job monitor thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:00,685 | INFO     | [job] control thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:00,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-31 19:26:14] 2024-10-31 23:26:00,963 | INFO     | [payload] validate_post thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:01,018 | INFO     | [job] create_data_payload thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:01,019 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:01,228 | INFO     | [job] validate thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:01,259 | INFO     | [payload] control thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:01,307 | INFO     | [payload] execute_payloads thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:01,683 | INFO     | [payload] validate_pre thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:01,730 | INFO     | [payload] failed_post thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:01,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-31 19:26:14] 2024-10-31 23:26:02,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-31 19:26:14] 2024-10-31 23:26:02,786 | INFO     | [data] copytool_out thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:03,159 | INFO     | [job] queue monitor thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:05,889 | INFO     | [data] queue_monitor thread has finished
[2024-10-31 19:26:14] 2024-10-31 23:26:07,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489752852288)>', '<ExcThread(monitor, started 140489143592704)>']
[2024-10-31 19:26:14] 2024-10-31 23:26:07,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-31 19:26:14] 2024-10-31 23:26:07,395 | INFO     | [monitor] control thread has ended
[2024-10-31 19:26:14] 2024-10-31 23:26:12,331 | INFO     | all workflow threads have been joined
[2024-10-31 19:26:14] 2024-10-31 23:26:12,331 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-31 19:26:14] 2024-10-31 23:26:12,331 | INFO     | traces error code: 0
[2024-10-31 19:26:14] 2024-10-31 23:26:12,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-31 19:26:14] 2024-10-31 23:26:13,401 [wrapper] ==== pilot stdout END ====
[2024-10-31 19:26:14] 2024-10-31 23:26:13,406 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-31 19:26:14] 2024-10-31 23:26:13,422 [wrapper] pilotpid: 52587
[2024-10-31 19:26:14] 2024-10-31 23:26:13,438 [wrapper] Pilot exit status: 0
[2024-10-31 19:26:14] 2024-10-31 23:26:13,455 [wrapper] pandaids: 6385533957
[2024-10-31 19:26:14] 2024-10-31 23:26:13,619 [wrapper] cleanup supervisor_pilot  50813 52588
[2024-10-31 19:26:14] 2024-10-31 23:26:13,654 [wrapper] Test setup, not cleaning
[2024-10-31 19:26:14] 2024-10-31 23:26:13,662 [wrapper] ==== wrapper stdout END ====
[2024-10-31 19:26:14] 2024-10-31 23:26:13,682 [wrapper] ==== wrapper stderr END ====
[2024-10-31 19:26:14] 2024-10-31 23:26:13,715 [wrapper] apfmon messages muted
[2024-10-31 19:26:14]  *** Error codes and diagnostics ***
[2024-10-31 19:26:14]     "exeErrorCode": 0,
[2024-10-31 19:26:14]     "exeErrorDiag": "",
[2024-10-31 19:26:14]     "pilotErrorCode": 0,
[2024-10-31 19:26:14]     "pilotErrorDiag": "",
[2024-10-31 19:26:14]  *** Listing of results directory ***
[2024-10-31 19:26:14] total 396964
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas    486088 Oct 31 16:15 pilot3.tar.gz
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas      5652 Oct 31 16:15 queuedata.json
[2024-10-31 19:26:14] -rwx------ 1 boincer umatlas     34589 Oct 31 16:19 runpilot2-wrapper.sh
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas       100 Oct 31 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-31 19:26:14] -rwxr-xr-x 1 boincer umatlas      7986 Oct 31 16:48 run_atlas
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas       105 Oct 31 16:48 job.xml
[2024-10-31 19:26:14] -rw-r--r-- 2 boincer umatlas 355039937 Oct 31 16:48 EVNT.41780306._000008.pool.root.1
[2024-10-31 19:26:14] drwxrwx--x 2 boincer umatlas      4096 Oct 31 16:48 shared
[2024-10-31 19:26:14] -rw-r--r-- 2 boincer umatlas    499919 Oct 31 16:48 input.tar.gz
[2024-10-31 19:26:14] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 16:48 start_atlas.sh
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas         0 Oct 31 16:48 boinc_lockfile
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas      2853 Oct 31 16:48 pandaJob.out
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas       467 Oct 31 16:48 setup.sh.local
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas   1030011 Oct 31 16:48 agis_schedconf.cvmfs.json
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas   1602446 Oct 31 16:48 agis_ddmendpoints.agis.ALL.json
[2024-10-31 19:26:14] drwx------ 4 boincer umatlas      4096 Oct 31 16:48 pilot3
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas       529 Oct 31 18:56 boinc_task_state.xml
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas      6385 Oct 31 19:18 init_data.xml
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas  43429410 Oct 31 19:25 HITS.41843725._008066.pool.root.1
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas      1073 Oct 31 19:25 memory_monitor_summary.json
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas   1251345 Oct 31 19:25 log.41843725._008066.job.log.tgz.1
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas        95 Oct 31 19:25 pilot_heartbeat.json
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas      8626 Oct 31 19:25 heartbeat.json
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas        27 Oct 31 19:26 wrapper_checkpoint.txt
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas      8192 Oct 31 19:26 boinc_mmap_file
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas      4525 Oct 31 19:26 pilotlog.txt
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas    830558 Oct 31 19:26 log.41843725._008066.job.log.1
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas       353 Oct 31 19:26 output.list
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas       620 Oct 31 19:26 runtime_log
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas   2099200 Oct 31 19:26 result.tar.gz
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas       661 Oct 31 19:26 rzXMDmdoqQ6n7OlckoGmwREmGgkVDo1bjSoqOlfODmhzTLDm08wSzn.diag
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas     11428 Oct 31 19:26 runtime_log.err
[2024-10-31 19:26:14] -rw-r--r-- 1 boincer umatlas     21891 Oct 31 19:26 stderr.txt
[2024-10-31 19:26:14] HITS file was successfully produced:
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas 43429410 Oct 31 19:25 shared/HITS.pool.root.1
[2024-10-31 19:26:14]  *** Contents of shared directory: ***
[2024-10-31 19:26:14] total 391696
[2024-10-31 19:26:14] -rw-r--r-- 2 boincer umatlas 355039937 Oct 31 16:48 ATLAS.root_0
[2024-10-31 19:26:14] -rw-r--r-- 2 boincer umatlas    499919 Oct 31 16:48 input.tar.gz
[2024-10-31 19:26:14] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 16:48 start_atlas.sh
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas  43429410 Oct 31 19:25 HITS.pool.root.1
[2024-10-31 19:26:14] -rw------- 1 boincer umatlas   2099200 Oct 31 19:26 result.tar.gz
19:26:15 (42846): run_atlas exited; CPU time 15356.904708
19:26:15 (42846): called boinc_finish(0)

</stderr_txt>
]]>

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