Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2024-10-31 21:09:50 (151282): Detected: vboxwrapper 26206
2024-10-31 21:09:50 (151282): Detected: BOINC client v8.0.4
2024-10-31 21:09:50 (151282): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2024-10-31 21:09:50 (151282): Successfully copied 'init_data.xml' to the shared directory.
2024-10-31 21:09:50 (151282): Create VM. (boinc_0110a633ff8b1194, slot#33)
2024-10-31 21:09:51 (151282): Setting Memory Size for VM. (4096MB)
2024-10-31 21:09:51 (151282): Setting CPU Count for VM. (1)
2024-10-31 21:09:51 (151282): Setting Chipset Options for VM.
2024-10-31 21:09:51 (151282): Setting Graphics Controller Options for VM.
2024-10-31 21:09:52 (151282): Setting Boot Options for VM.
2024-10-31 21:09:52 (151282): Setting Network Configuration for NAT.
2024-10-31 21:09:52 (151282): Enabling VM Network Access.
2024-10-31 21:09:52 (151282): Disabling USB Support for VM.
2024-10-31 21:09:52 (151282): Disabling COM Port Support for VM.
2024-10-31 21:09:52 (151282): Disabling LPT Port Support for VM.
2024-10-31 21:09:52 (151282): Disabling Audio Support for VM.
2024-10-31 21:09:53 (151282): Disabling Clipboard Support for VM.
2024-10-31 21:09:53 (151282): Disabling Drag and Drop Support for VM.
2024-10-31 21:09:53 (151282): Adding storage controller(s) to VM.
2024-10-31 21:09:53 (151282): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-10-31 21:09:53 (151282): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-10-31 21:09:54 (151282): forwarding host port 51867 to guest port 80
2024-10-31 21:09:54 (151282): Enabling remote desktop for VM.
2024-10-31 21:09:54 (151282): Enabling shared directory for VM.
2024-10-31 21:09:54 (151282): Starting VM using VBoxManage interface. (boinc_0110a633ff8b1194, slot#33)
2024-10-31 21:09:56 (151282): Successfully started VM. (PID = '151778')
2024-10-31 21:09:56 (151282): Reporting VM Process ID to BOINC.
2024-10-31 21:09:56 (151282): Guest Log: BIOS: VirtualBox 7.0.20
2024-10-31 21:09:56 (151282): Guest Log: CPUID EDX: 0x178bfbff
2024-10-31 21:09:56 (151282): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-10-31 21:09:56 (151282): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-10-31 21:09:56 (151282): VM state change detected. (old = 'poweredoff', new = 'running')
2024-10-31 21:09:56 (151282): Detected: Web Application Enabled (http://localhost:51867)
2024-10-31 21:09:56 (151282): Detected: Remote Desktop Enabled (localhost:52711)
2024-10-31 21:09:56 (151282): Preference change detected
2024-10-31 21:09:56 (151282): Setting CPU throttle for VM. (100%)
2024-10-31 21:09:56 (151282): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-10-31 21:09:58 (151282): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-10-31 21:09:58 (151282): Guest Log: BIOS: Booting from Hard Disk...
2024-10-31 21:10:00 (151282): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-10-31 21:10:00 (151282): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-10-31 21:10:00 (151282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-10-31 21:10:04 (151282): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-10-31 21:10:04 (151282): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-10-31 21:10:14 (151282): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-10-31 21:10:14 (151282): Guest Log: 00:00:00.000135 main     Log opened 2024-10-31T20:10:12.127495000Z
2024-10-31 21:10:14 (151282): Guest Log: 00:00:00.000236 main     OS Product: Linux
2024-10-31 21:10:14 (151282): Guest Log: 00:00:00.000258 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-10-31 21:10:14 (151282): Guest Log: 00:00:00.000282 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-10-31 21:10:14 (151282): Guest Log: 00:00:00.000300 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-10-31 21:10:14 (151282): Guest Log: 00:00:00.000301 main     Process ID: 1234
2024-10-31 21:10:14 (151282): Guest Log: 00:00:00.000301 main     Package type: LINUX_64BITS_GENERIC
2024-10-31 21:10:14 (151282): Guest Log: 00:00:00.002740 main     5.2.32 r132073 started. Verbose level = 0
2024-10-31 21:10:14 (151282): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-10-31 21:10:14 (151282): Guest Log: [INFO] Mounting shared directory
2024-10-31 21:10:14 (151282): Guest Log: [INFO] Checking for init_data.xml
2024-10-31 21:10:16 (151282): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-10-31 21:10:16 (151282): Guest Log: [INFO] Detected branch: prod
2024-10-31 21:10:16 (151282): Guest Log: This is the prod version of the ATLAS job wrapper
2024-10-31 21:10:16 (151282): Guest Log: Copying input files
2024-10-31 21:10:18 (151282): Guest Log: Copied input files into RunAtlas.
2024-10-31 21:10:18 (151282): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2024-10-31 21:10:25 (151282): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-10-31 21:10:25 (151282): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-10-31 21:10:25 (151282): Guest Log: 2.6.3.0 1503 0 29496 138955 4 1 3117281 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2024-10-31 21:10:26 (151282): Guest Log: copied the webapp to /var/www
2024-10-31 21:10:26 (151282): Guest Log: core_number=1
2024-10-31 21:10:26 (151282): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-10-31 21:10:26 (151282): Guest Log:  *** Starting ATLAS job. (PandaID=6385502580 taskID=41843827) ***
2024-10-31 22:48:57 (151282): Status Report: Elapsed Time: '6000.000000'
2024-10-31 22:48:57 (151282): Status Report: CPU Time: '5480.000000'
2024-11-01 00:27:58 (151282): Status Report: Elapsed Time: '12000.000000'
2024-11-01 00:27:58 (151282): Status Report: CPU Time: '11428.700000'
2024-11-01 02:06:59 (151282): Status Report: Elapsed Time: '18000.000000'
2024-11-01 02:06:59 (151282): Status Report: CPU Time: '17377.280000'
2024-11-01 03:46:00 (151282): Status Report: Elapsed Time: '24000.000000'
2024-11-01 03:46:00 (151282): Status Report: CPU Time: '23325.570000'
2024-11-01 05:25:01 (151282): Status Report: Elapsed Time: '30000.000000'
2024-11-01 05:25:01 (151282): Status Report: CPU Time: '29277.910000'
2024-11-01 07:04:02 (151282): Status Report: Elapsed Time: '36000.000000'
2024-11-01 07:04:02 (151282): Status Report: CPU Time: '35226.020000'
2024-11-01 08:43:03 (151282): Status Report: Elapsed Time: '42000.000000'
2024-11-01 08:43:03 (151282): Status Report: CPU Time: '41176.030000'
2024-11-01 09:08:08 (151282): Guest Log:  *** Job finished ***
2024-11-01 09:08:08 (151282): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:07:56,652 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139981770016576)>', '<ExcThread(queue_monitor, started 139981037238016)>']
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:07:58,656 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139981770016576)>', '<ExcThread(queue_monitor, started 139981037238016)>']
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:00,661 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139981770016576)>', '<ExcThread(queue_monitor, started 139981037238016)>']
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:02,532 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139981770016576)>', '<ExcThread(queue_monitor, started 139981037238016)>']
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:02,533 | INFO     | [job] queue monitor thread has finished
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:02,666 | INFO     | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 139981770016576)>'])
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:07,672 | INFO     | all workflow threads have been joined
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:07,673 | INFO     | end of generic workflow (traces error code: 0)
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:07,674 | INFO     | traces error code: 0
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:07,675 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:07,965 [wrapper] ==== pilot stdout END ====
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:07,980 [wrapper] ==== wrapper stdout RESUME ====
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:07,994 [wrapper] pilotpid: 5782
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:08,009 [wrapper] Pilot exit status: 0
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:08,069 [wrapper] pandaids: 6385502580
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:08,168 [wrapper] cleanup supervisor_pilot 17760 5783
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:08,184 [wrapper] Test setup, not cleaning
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:08,199 [wrapper] ==== wrapper stdout END ====
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:08,213 [wrapper] ==== wrapper stderr END ====
2024-11-01 09:08:08 (151282): Guest Log: 2024-11-01 08:08:08,240 [wrapper] apfmon messages muted
2024-11-01 09:08:08 (151282): Guest Log:  *** Error codes and diagnostics ***
2024-11-01 09:08:08 (151282): Guest Log:  *** Listing of results directory ***
2024-11-01 09:08:08 (151282): Guest Log: total 17504
2024-11-01 09:08:08 (151282): Guest Log: -rw-r--r--. 1 atlas atlas  486088 Oct 31 19:21 pilot3.tar.gz
2024-11-01 09:08:08 (151282): Guest Log: -rw-r--r--. 1 atlas atlas    5652 Oct 31 19:39 queuedata.json
2024-11-01 09:08:08 (151282): Guest Log: -rwx------. 1 atlas atlas   34589 Oct 31 19:40 runpilot2-wrapper.sh
2024-11-01 09:08:08 (151282): Guest Log: -rw-r--r--. 1 atlas atlas   17569 Oct 31 20:10 start_atlas.sh
2024-11-01 09:08:08 (151282): Guest Log: -rw-r--r--. 1 atlas atlas    9568 Oct 31 20:10 init_data.xml
2024-11-01 09:08:08 (151282): Guest Log: -rw-r--r--. 1 atlas atlas  499921 Oct 31 20:10 input.tar.gz
2024-11-01 09:08:08 (151282): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 31 20:10 EVNT.41779932._000007.pool.root.1 -> /data/./ATLAS.root_0
2024-11-01 09:08:08 (151282): Guest Log: -rw-r--r--. 1 atlas atlas    2894 Oct 31 20:10 pandaJob.out
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas     460 Oct 31 20:10 setup.sh.local
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas 1030011 Oct 31 20:10 agis_schedconf.cvmfs.json
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas 1602446 Oct 31 20:10 agis_ddmendpoints.agis.ALL.json
2024-11-01 09:08:08 (151282): Guest Log: drwx------. 4 atlas atlas    4096 Oct 31 20:10 pilot3
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas     907 Nov  1 07:45 heartbeat.json
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas      95 Nov  1 08:07 pilot_heartbeat.json
2024-11-01 09:08:08 (151282): Guest Log: drwxrwx---. 3 atlas atlas    4096 Nov  1 08:07 PanDA_Pilot-6385502580
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas    1026 Nov  1 08:07 memory_monitor_summary.json
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas 4704260 Nov  1 08:08 pilotlog.txt
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas 4720841 Nov  1 08:08 log.41843827._001117.job.log.1
2024-11-01 09:08:08 (151282): Guest Log: -rw-r--r--. 1 atlas atlas     571 Nov  1 08:08 runtime_log
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas 4730880 Nov  1 08:08 result.tar.gz
2024-11-01 09:08:08 (151282): Guest Log: -rw-r--r--. 1 atlas atlas   10508 Nov  1 08:08 runtime_log.err
2024-11-01 09:08:08 (151282): Guest Log: -rw-------. 1 atlas atlas     649 Nov  1 08:08 PSNLDmTDqQ6n9Rq4apOajLDm4fhM0noT9bVorHsSDmjZZLDmlnitmn.diag
2024-11-01 09:08:08 (151282): Guest Log: Looking for outputfile HITS.41843827._001117.pool.root.1
2024-11-01 09:08:08 (151282): Guest Log: No HITS file was produced
2024-11-01 09:08:08 (151282): Guest Log: Successfully finished the ATLAS job!
2024-11-01 09:08:08 (151282): Guest Log: Copying the results back to the shared directory!
2024-11-01 09:08:09 (151282): Guest Log:  *** Contents of shared directory: ***
2024-11-01 09:08:09 (151282): Guest Log: total 375584
2024-11-01 09:08:09 (151282): Guest Log: -rw-r--r--. 1 root root 379325080 Oct 31 20:09 ATLAS.root_0
2024-11-01 09:08:09 (151282): Guest Log: -rw-r--r--. 1 root root      9568 Oct 31 20:09 init_data.xml
2024-11-01 09:08:09 (151282): Guest Log: -rw-r--r--. 1 root root    499921 Oct 31 20:09 input.tar.gz
2024-11-01 09:08:09 (151282): Guest Log: -rw-r--r--. 1 root root   4730880 Nov  1 08:08 result.tar.gz
2024-11-01 09:08:09 (151282): Guest Log: -rw-r--r--. 1 root root     17569 Oct 31 20:09 start_atlas.sh
2024-11-01 09:08:09 (151282): Guest Log:  *** Success! Shutting down the machine. ***
2024-11-01 09:08:09 (151282): VM Completion File Detected.
2024-11-01 09:08:09 (151282): Powering off VM.
2024-11-01 09:08:11 (151282): Successfully stopped VM.
2024-11-01 09:08:11 (151282): Deregistering VM. (boinc_0110a633ff8b1194, slot#33)
2024-11-01 09:08:11 (151282): Removing network bandwidth throttle group from VM.
2024-11-01 09:08:12 (151282): Removing VM from VirtualBox.
09:08:18 (151282): called boinc_finish(0)

</stderr_txt>
]]>

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