Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:10 (253760): wrapper (7.7.26015): starting
09:56:10 (253760): wrapper: running run_atlas (--nthreads 8)
[2024-10-31 09:56:10] Arguments: --nthreads 8
[2024-10-31 09:56:10] Threads: 8
[2024-10-31 09:56:10] Checking for CVMFS
[2024-10-31 09:56:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-31 09:56:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-31 09:56:11] Running cvmfs_config stat atlas.cern.ch
[2024-10-31 09:56:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-31 09:56:11] 2.11.2.0 294477 1527 252068 138944 3 358 11024200 18432000 18604 130560 0 13750180 99.395 23791811 39912 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-10-31 09:56:11] CVMFS is ok
[2024-10-31 09:56:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-31 09:56:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-31 09:56:11] Further information can be found at the LHC@home message board.
[2024-10-31 09:56:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-31 09:56:11] Checking for apptainer binary...
[2024-10-31 09:56:11] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-31 09:56:11] Running /usr/bin/apptainer --version
[2024-10-31 09:56:11] apptainer version 1.3.2-1.el7
[2024-10-31 09:56:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-31 09:56:13] c-211-35-1.aglt2.org
[2024-10-31 09:56:13] apptainer works
[2024-10-31 09:56:13] Set ATHENA_PROC_NUMBER=8
[2024-10-31 09:56:13] Set ATHENA_CORE_NUMBER=8
[2024-10-31 09:56:13] Starting ATLAS job with PandaID=6385134330
[2024-10-31 09:56:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-31 12:36:53]  *** The last 200 lines of the pilot log: ***
[2024-10-31 12:36:53] 2024-10-31 16:36:28,157 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-31 12:36:53] 2024-10-31 16:36:28,260 | INFO     | job 6385134330 has state=finished
[2024-10-31 12:36:53] 2024-10-31 16:36:28,261 | INFO     | preparing for final server update for job 6385134330 in state='finished'
[2024-10-31 12:36:53] 2024-10-31 16:36:28,340 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-10-31 12:36:53] 2024-10-31 16:36:28,340 | INFO     | this job has now completed (state=finished)
[2024-10-31 12:36:53] 2024-10-31 16:36:28,340 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-31 12:36:53] 2024-10-31 16:36:28,340 | INFO     | log transfer has been attempted: DONE
[2024-10-31 12:36:53] 2024-10-31 16:36:28,340 | INFO     | job 6385134330 has finished - writing final server update
[2024-10-31 12:36:53] 2024-10-31 16:36:28,341 | INFO     | total number of processed events: 50 (read)
[2024-10-31 12:36:53] 2024-10-31 16:36:28,346 | INFO     | executing command: lscpu
[2024-10-31 12:36:53] 2024-10-31 16:36:28,503 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-10-31 12:36:53] 2024-10-31 16:36:28,581 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-31 12:36:53] 2024-10-31 16:36:38,539 | INFO     | CPU arch script returned: x86-64-v4
[2024-10-31 12:36:53] 2024-10-31 16:36:38,539 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6385134330/memory_monitor_summary.json (trf name=prmon)
[2024-10-31 12:36:53] 2024-10-31 16:36:38,546 | INFO     | extracted standard info from prmon json
[2024-10-31 12:36:53] 2024-10-31 16:36:38,547 | INFO     | extracted standard memory fields from prmon json
[2024-10-31 12:36:53] 2024-10-31 16:36:38,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-31 12:36:53] 2024-10-31 16:36:38,551 | INFO     | fitting pss+swap vs Time
[2024-10-31 12:36:53] 2024-10-31 16:36:38,551 | INFO     | model: linear, x: [1730383046.0, 1730383107.0, 1730383168.0, 1730383229.0, 1730383290.0, 1730383351.0, 1730383412.0, 1730383473.0, 1730383534.0, 1730383595.0, 1730
[2024-10-31 12:36:53] 2024-10-31 16:36:38,551 | INFO     | sum of square deviations: 1199975407.1974518
[2024-10-31 12:36:53] 2024-10-31 16:36:38,552 | INFO     | sum of deviations: -20469868365.757896
[2024-10-31 12:36:53] 2024-10-31 16:36:38,552 | INFO     | mean x: 1730387805.22293
[2024-10-31 12:36:53] 2024-10-31 16:36:38,552 | INFO     | mean y: 1815278.8216560509
[2024-10-31 12:36:53] 2024-10-31 16:36:38,552 | INFO     | -- intersect: 29519762381.880672
[2024-10-31 12:36:53] 2024-10-31 16:36:38,553 | INFO     | intersect: 29519762381.880672
[2024-10-31 12:36:53] 2024-10-31 16:36:38,553 | INFO     | chi2: 39.90799405636817
[2024-10-31 12:36:53] 2024-10-31 16:36:38,553 | INFO     | model: linear, x: [1730383046.0, 1730383107.0, 1730383168.0, 1730383229.0, 1730383290.0, 1730383351.0, 1730383412.0, 1730383473.0, 1730383534.0, 1730383595.0, 1730
[2024-10-31 12:36:53] 2024-10-31 16:36:38,553 | INFO     | sum of square deviations: 1088999319.4736817
[2024-10-31 12:36:53] 2024-10-31 16:36:38,554 | INFO     | sum of deviations: 8693178925.947361
[2024-10-31 12:36:53] 2024-10-31 16:36:38,554 | INFO     | mean x: 1730387652.7631578
[2024-10-31 12:36:53] 2024-10-31 16:36:38,554 | INFO     | mean y: 1855389.0263157894
[2024-10-31 12:36:53] 2024-10-31 16:36:38,554 | INFO     | -- intersect: -13811348354.74677
[2024-10-31 12:36:53] 2024-10-31 16:36:38,554 | INFO     | intersect: -13811348354.74677
[2024-10-31 12:36:53] 2024-10-31 16:36:38,555 | INFO     | chi2: 35.491348906826545
[2024-10-31 12:36:53] 2024-10-31 16:36:38,555 | INFO     | current chi2=35.491348906826545 (change=11.067068776504573 %)
[2024-10-31 12:36:53] 2024-10-31 16:36:38,555 | INFO     | right removable region: 151
[2024-10-31 12:36:53] 2024-10-31 16:36:38,555 | INFO     | model: linear, x: [1730383351.0, 1730383412.0, 1730383473.0, 1730383534.0, 1730383595.0, 1730383656.0, 1730383717.0, 1730383778.0, 1730383839.0, 1730383900.0, 1730
[2024-10-31 12:36:53] 2024-10-31 16:36:38,555 | INFO     | sum of square deviations: 1088882199.4736817
[2024-10-31 12:36:53] 2024-10-31 16:36:38,556 | INFO     | sum of deviations: -53511209185.49998
[2024-10-31 12:36:53] 2024-10-31 16:36:38,556 | INFO     | mean x: 1730387957.7631578
[2024-10-31 12:36:53] 2024-10-31 16:36:38,556 | INFO     | mean y: 1860517.125
[2024-10-31 12:36:53] 2024-10-31 16:36:38,556 | INFO     | -- intersect: 85038746990.87846
[2024-10-31 12:36:53] 2024-10-31 16:36:38,556 | INFO     | intersect: 85038746990.87846
[2024-10-31 12:36:53] 2024-10-31 16:36:38,557 | INFO     | chi2: 35.32459725975271
[2024-10-31 12:36:53] 2024-10-31 16:36:38,557 | INFO     | current chi2=35.32459725975271 (change=11.484908988764577 %)
[2024-10-31 12:36:53] 2024-10-31 16:36:38,557 | INFO     | left removable region: 10
[2024-10-31 12:36:53] 2024-10-31 16:36:38,557 | INFO     | model: linear, x: [1730383656.0, 1730383717.0, 1730383778.0, 1730383839.0, 1730383900.0, 1730383961.0, 1730384022.0, 1730384083.0, 1730384144.0, 1730384205.0, 1730
[2024-10-31 12:36:53] 2024-10-31 16:36:38,557 | INFO     | sum of square deviations: 869176284.5531936
[2024-10-31 12:36:53] 2024-10-31 16:36:38,558 | INFO     | sum of deviations: -42560290639.319145
[2024-10-31 12:36:53] 2024-10-31 16:36:38,558 | INFO     | mean x: 1730387927.3617022
[2024-10-31 12:36:53] 2024-10-31 16:36:38,558 | INFO     | mean y: 1952535.829787234
[2024-10-31 12:36:53] 2024-10-31 16:36:38,558 | INFO     | -- intersect: 84732535291.13504
[2024-10-31 12:36:53] 2024-10-31 16:36:38,558 | INFO     | intersect: 84732535291.13504
[2024-10-31 12:36:53] 2024-10-31 16:36:38,558 | INFO     | chi2: 27.78161499426701
[2024-10-31 12:36:53] 2024-10-31 16:36:38,558 | INFO     | -- intersect: 84732535291.13504
[2024-10-31 12:36:53] 2024-10-31 16:36:38,559 | INFO     | current memory leak: -48.97 B/s (using 141 data points, chi2=27.78)
[2024-10-31 12:36:53] 2024-10-31 16:36:38,559 | INFO     | ..............................
[2024-10-31 12:36:53] 2024-10-31 16:36:38,559 | INFO     | . Timing measurements:
[2024-10-31 12:36:53] 2024-10-31 16:36:38,559 | INFO     | . get job = 0 s
[2024-10-31 12:36:53] 2024-10-31 16:36:38,559 | INFO     | . initial setup = 2 s
[2024-10-31 12:36:53] 2024-10-31 16:36:38,559 | INFO     | . payload setup = 16 s
[2024-10-31 12:36:53] 2024-10-31 16:36:38,560 | INFO     | . stage-in = 0 s
[2024-10-31 12:36:53] 2024-10-31 16:36:38,560 | INFO     | . payload execution = 9547 s
[2024-10-31 12:36:53] 2024-10-31 16:36:38,560 | INFO     | . stage-out = 1 s
[2024-10-31 12:36:53] 2024-10-31 16:36:38,560 | INFO     | . log creation = 0 s
[2024-10-31 12:36:53] 2024-10-31 16:36:38,560 | INFO     | ..............................
[2024-10-31 12:36:53] 2024-10-31 16:36:38,766 | WARNING  | process 289118 is no longer using CPU - aborting
[2024-10-31 12:36:53] 2024-10-31 16:36:38,767 | INFO     | aborting job monitoring since job object (job id=6385134330) has expired
[2024-10-31 12:36:53] 2024-10-31 16:36:38,993 | INFO     | 
[2024-10-31 12:36:53] 2024-10-31 16:36:38,993 | INFO     | job summary report
[2024-10-31 12:36:53] 2024-10-31 16:36:38,993 | INFO     | --------------------------------------------------
[2024-10-31 12:36:53] 2024-10-31 16:36:38,993 | INFO     | PanDA job id: 6385134330
[2024-10-31 12:36:53] 2024-10-31 16:36:38,993 | INFO     | task id: 41843725
[2024-10-31 12:36:53] 2024-10-31 16:36:38,993 | INFO     | errors: (none)
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | pilot state: finished 
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | transexitcode: 0
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | exeerrorcode: 0
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | exeerrordiag: 
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | exitcode: 0
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | exitmsg: OK
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | cpuconsumptiontime: 15693 s
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | nevents: 50
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | neventsw: 0
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | pid: 289118
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | pgrp: 289118
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | corecount: 8
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | event service: False
[2024-10-31 12:36:53] 2024-10-31 16:36:38,994 | INFO     | sizes: {0: 2428360, 9: 2428566, 11: 2428594, 9567: 2457859, 9568: 2457858, 9569: 2466934, 9571: 2467118, 9581: 2467340}
[2024-10-31 12:36:53] 2024-10-31 16:36:38,995 | INFO     | --------------------------------------------------
[2024-10-31 12:36:53] 2024-10-31 16:36:38,995 | INFO     | 
[2024-10-31 12:36:53] 2024-10-31 16:36:38,995 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-10-31 12:36:53] 2024-10-31 16:36:39,024 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,026 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-31 12:36:53] 2024-10-31 16:36:39,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,026 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-31 12:36:53] 2024-10-31 16:36:39,026 | INFO     | job 6385134330 has completed (purged errors)
[2024-10-31 12:36:53] 2024-10-31 16:36:39,026 | INFO     | overall cleanup function is called
[2024-10-31 12:36:53] 2024-10-31 16:36:40,048 | INFO     | --- collectZombieJob: --- 10, [289118]
[2024-10-31 12:36:53] 2024-10-31 16:36:40,048 | INFO     | zombie collector waiting for pid 289118
[2024-10-31 12:36:53] 2024-10-31 16:36:40,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-31 12:36:53] 2024-10-31 16:36:40,048 | INFO     | collected zombie processes
[2024-10-31 12:36:53] 2024-10-31 16:36:40,048 | INFO     | will attempt to kill all subprocesses of pid=289118
[2024-10-31 12:36:53] 2024-10-31 16:36:40,327 | INFO     | process IDs to be killed: [289118] (in reverse order)
[2024-10-31 12:36:53] 2024-10-31 16:36:40,453 | WARNING  | found no corresponding commands to process id(s)
[2024-10-31 12:36:53] 2024-10-31 16:36:40,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-31 12:36:53] 2024-10-31 16:36:40,466 | INFO     | did not find any defunct processes belonging to 289118
[2024-10-31 12:36:53] 2024-10-31 16:36:40,493 | INFO     | did not find any defunct processes belonging to 289118
[2024-10-31 12:36:53] 2024-10-31 16:36:40,493 | INFO     | ready for new job
[2024-10-31 12:36:53] 2024-10-31 16:36:40,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-31 12:36:53] 2024-10-31 16:36:40,495 | INFO     | **************************************
[2024-10-31 12:36:53] 2024-10-31 16:36:40,495 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-31 12:36:53] 2024-10-31 16:36:40,495 | INFO     | **************************************
[2024-10-31 12:36:53] 2024-10-31 16:36:40,495 | INFO     | 
[2024-10-31 12:36:53] 2024-10-31 16:36:40,503 | INFO     | architecture information:
[2024-10-31 12:36:53] 2024-10-31 16:36:40,505 | INFO     | executing command: cat /etc/os-release
[2024-10-31 12:36:53] 2024-10-31 16:36:40,533 | INFO     | cat /etc/os-release:
[2024-10-31 12:36:53] NAME="CentOS Linux"
[2024-10-31 12:36:53] VERSION="7 (Core)"
[2024-10-31 12:36:53] ID="centos"
[2024-10-31 12:36:53] ID_LIKE="rhel fedora"
[2024-10-31 12:36:53] VERSION_ID="7"
[2024-10-31 12:36:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-31 12:36:53] ANSI_COLOR="0;31"
[2024-10-31 12:36:53] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-31 12:36:53] HOME_URL="https://www.centos.org/"
[2024-10-31 12:36:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-31 12:36:53] 
[2024-10-31 12:36:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-31 12:36:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-31 12:36:53] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-31 12:36:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-31 12:36:53] 
[2024-10-31 12:36:53] 2024-10-31 16:36:40,533 | INFO     | **************************************
[2024-10-31 12:36:53] 2024-10-31 16:36:41,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-10-31 12:36:53] 2024-10-31 16:36:41,069 | INFO     | sufficient remaining disk space (102644056064 B)
[2024-10-31 12:36:53] 2024-10-31 16:36:41,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-31 12:36:53] 2024-10-31 16:36:41,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-31 12:36:53] 2024-10-31 16:36:41,175 | INFO     | all data control threads have been joined
[2024-10-31 12:36:53] 2024-10-31 16:36:41,271 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-31 12:36:53] 2024-10-31 16:36:41,271 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-31 12:36:53] 2024-10-31 16:36:41,271 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-31 12:36:53] 2024-10-31 16:36:41,271 | INFO     | will abort loop
[2024-10-31 12:36:53] 2024-10-31 16:36:41,602 | INFO     | all job control threads have been joined
[2024-10-31 12:36:53] 2024-10-31 16:36:41,660 | INFO     | found 0 job(s) in 20 queues
[2024-10-31 12:36:53] 2024-10-31 16:36:41,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-31 12:36:53] 2024-10-31 16:36:41,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-31 12:36:53] 2024-10-31 16:36:41,675 | INFO     | all payload control threads have been joined
[2024-10-31 12:36:53] 2024-10-31 16:36:42,076 | INFO     | [job] retrieve thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:42,087 | INFO     | [payload] failed_post thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:42,181 | INFO     | [data] control thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:42,275 | INFO     | [job] job monitor thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:42,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-31 12:36:53] 2024-10-31 16:36:42,480 | INFO     | [payload] validate_pre thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:42,608 | INFO     | [job] control thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:42,654 | INFO     | [payload] execute_payloads thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:42,680 | INFO     | [payload] control thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:42,781 | INFO     | [payload] validate_post thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:42,857 | INFO     | [data] copytool_in thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:43,208 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:43,278 | INFO     | [job] validate thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:43,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-31 12:36:53] 2024-10-31 16:36:43,474 | INFO     | [job] create_data_payload thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:43,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-31 12:36:53] 2024-10-31 16:36:44,374 | INFO     | [data] copytool_out thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:44,708 | INFO     | [job] queue monitor thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:47,286 | INFO     | [data] queue_monitor thread has finished
[2024-10-31 12:36:53] 2024-10-31 16:36:48,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508972500800)>', '<ExcThread(monitor, started 140508236080896)>']
[2024-10-31 12:36:53] 2024-10-31 16:36:48,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-31 12:36:53] 2024-10-31 16:36:48,692 | INFO     | [monitor] control thread has ended
[2024-10-31 12:36:53] 2024-10-31 16:36:53,424 | INFO     | all workflow threads have been joined
[2024-10-31 12:36:53] 2024-10-31 16:36:53,424 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-31 12:36:53] 2024-10-31 16:36:53,424 | INFO     | traces error code: 0
[2024-10-31 12:36:53] 2024-10-31 16:36:53,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-31 12:36:53] 2024-10-31 16:36:53,646 [wrapper] ==== pilot stdout END ====
[2024-10-31 12:36:53] 2024-10-31 16:36:53,649 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-31 12:36:53] 2024-10-31 16:36:53,651 [wrapper] pilotpid: 267200
[2024-10-31 12:36:53] 2024-10-31 16:36:53,654 [wrapper] Pilot exit status: 0
[2024-10-31 12:36:53] 2024-10-31 16:36:53,674 [wrapper] pandaids: 6385134330
[2024-10-31 12:36:53] 2024-10-31 16:36:53,742 [wrapper] cleanup supervisor_pilot   3584 267201
[2024-10-31 12:36:53] 2024-10-31 16:36:53,744 [wrapper] Test setup, not cleaning
[2024-10-31 12:36:53] 2024-10-31 16:36:53,747 [wrapper] ==== wrapper stdout END ====
[2024-10-31 12:36:53] 2024-10-31 16:36:53,752 [wrapper] ==== wrapper stderr END ====
[2024-10-31 12:36:53] 2024-10-31 16:36:53,757 [wrapper] apfmon messages muted
[2024-10-31 12:36:53]  *** Error codes and diagnostics ***
[2024-10-31 12:36:53]     "exeErrorCode": 0,
[2024-10-31 12:36:53]     "exeErrorDiag": "",
[2024-10-31 12:36:53]     "pilotErrorCode": 0,
[2024-10-31 12:36:53]     "pilotErrorDiag": "",
[2024-10-31 12:36:53]  *** Listing of results directory ***
[2024-10-31 12:36:53] total 401292
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas    486088 Oct 31 09:20 pilot3.tar.gz
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas      5652 Oct 31 09:24 queuedata.json
[2024-10-31 12:36:53] -rwx------ 1 boincer umatlas     34589 Oct 31 09:25 runpilot2-wrapper.sh
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas       100 Oct 31 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-31 12:36:53] -rwxr-xr-x 1 boincer umatlas      7986 Oct 31 09:56 run_atlas
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas       105 Oct 31 09:56 job.xml
[2024-10-31 12:36:53] -rw-r--r-- 2 boincer umatlas 355290678 Oct 31 09:56 EVNT.41780306._000011.pool.root.1
[2024-10-31 12:36:53] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 09:56 start_atlas.sh
[2024-10-31 12:36:53] drwxrwx--x 2 boincer umatlas      4096 Oct 31 09:56 shared
[2024-10-31 12:36:53] -rw-r--r-- 2 boincer umatlas    499919 Oct 31 09:56 input.tar.gz
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas         0 Oct 31 09:56 boinc_lockfile
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas      2854 Oct 31 09:56 pandaJob.out
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas       467 Oct 31 09:56 setup.sh.local
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas   1030026 Oct 31 09:56 agis_schedconf.cvmfs.json
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas   1611897 Oct 31 09:56 agis_ddmendpoints.agis.ALL.json
[2024-10-31 12:36:53] drwx------ 4 boincer umatlas      4096 Oct 31 09:56 pilot3
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas       530 Oct 31 11:53 boinc_task_state.xml
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas      6385 Oct 31 12:30 init_data.xml
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas  47552196 Oct 31 12:36 HITS.41843725._005939.pool.root.1
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas      1062 Oct 31 12:36 memory_monitor_summary.json
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas        95 Oct 31 12:36 pilot_heartbeat.json
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas   1251269 Oct 31 12:36 log.41843725._005939.job.log.tgz.1
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas      8606 Oct 31 12:36 heartbeat.json
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas        27 Oct 31 12:36 wrapper_checkpoint.txt
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas      4402 Oct 31 12:36 pilotlog.txt
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas      8192 Oct 31 12:36 boinc_mmap_file
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas    853616 Oct 31 12:36 log.41843725._005939.job.log.1
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas       353 Oct 31 12:36 output.list
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas       620 Oct 31 12:36 runtime_log
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas   2119680 Oct 31 12:36 result.tar.gz
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas     11428 Oct 31 12:36 runtime_log.err
[2024-10-31 12:36:53] -rw------- 1 boincer umatlas       661 Oct 31 12:36 Mq7LDmOMkQ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmJrQMDm27QE1m.diag
[2024-10-31 12:36:53] -rw-r--r-- 1 boincer umatlas     21792 Oct 31 12:36 stderr.txt
[2024-10-31 12:36:54] HITS file was successfully produced:
[2024-10-31 12:36:54] -rw------- 1 boincer umatlas 47552196 Oct 31 12:36 shared/HITS.pool.root.1
[2024-10-31 12:36:54]  *** Contents of shared directory: ***
[2024-10-31 12:36:54] total 395992
[2024-10-31 12:36:54] -rw-r--r-- 2 boincer umatlas 355290678 Oct 31 09:56 ATLAS.root_0
[2024-10-31 12:36:54] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 09:56 start_atlas.sh
[2024-10-31 12:36:54] -rw-r--r-- 2 boincer umatlas    499919 Oct 31 09:56 input.tar.gz
[2024-10-31 12:36:54] -rw------- 1 boincer umatlas  47552196 Oct 31 12:36 HITS.pool.root.1
[2024-10-31 12:36:54] -rw------- 1 boincer umatlas   2119680 Oct 31 12:36 result.tar.gz
12:36:55 (253760): run_atlas exited; CPU time 15484.788168
12:36:55 (253760): called boinc_finish(0)

</stderr_txt>
]]>

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