Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:07:53 (229751): wrapper (7.7.26015): starting
07:07:53 (229751): wrapper: running run_atlas (--nthreads 8)
[2024-10-31 07:07:53] Arguments: --nthreads 8
[2024-10-31 07:07:53] Threads: 8
[2024-10-31 07:07:53] Checking for CVMFS
[2024-10-31 07:07:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-31 07:07:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-31 07:07:54] Running cvmfs_config stat atlas.cern.ch
[2024-10-31 07:07:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-31 07:07:55] 2.11.2.0 294477 1359 250076 138939 3 462 14577147 18432000 24235 130560 0 12409297 99.508 19414338 40791 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-10-31 07:07:55] CVMFS is ok
[2024-10-31 07:07:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-31 07:07:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-31 07:07:55] Further information can be found at the LHC@home message board.
[2024-10-31 07:07:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-31 07:07:55] Checking for apptainer binary...
[2024-10-31 07:07:55] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-31 07:07:55] Running /usr/bin/apptainer --version
[2024-10-31 07:07:56] apptainer version 1.3.2-1.el7
[2024-10-31 07:07:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-31 07:08:32] c-211-35-1.aglt2.org
[2024-10-31 07:08:32] apptainer works
[2024-10-31 07:08:32] Set ATHENA_PROC_NUMBER=8
[2024-10-31 07:08:32] Set ATHENA_CORE_NUMBER=8
[2024-10-31 07:08:33] Starting ATLAS job with PandaID=6384990431
[2024-10-31 07:08:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-31 09:55:34]  *** The last 200 lines of the pilot log: ***
[2024-10-31 09:55:34] 2024-10-31 13:55:11,130 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-31 09:55:34] 2024-10-31 13:55:11,130 | INFO     | log transfer has been attempted: DONE
[2024-10-31 09:55:34] 2024-10-31 13:55:11,130 | INFO     | job 6384990431 has finished - writing final server update
[2024-10-31 09:55:34] 2024-10-31 13:55:11,133 | INFO     | total number of processed events: 50 (read)
[2024-10-31 09:55:34] 2024-10-31 13:55:11,143 | INFO     | executing command: lscpu
[2024-10-31 09:55:34] 2024-10-31 13:55:11,233 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-10-31 09:55:34] 2024-10-31 13:55:11,289 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-31 09:55:34] 2024-10-31 13:55:12,218 | INFO     | monitor loop #726: job 0:6384990431 is in state 'finished'
[2024-10-31 09:55:34] 2024-10-31 13:55:12,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 09:55:34] 2024-10-31 13:55:14,721 | INFO     | monitor loop #727: job 0:6384990431 is in state 'finished'
[2024-10-31 09:55:34] 2024-10-31 13:55:14,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 09:55:34] 2024-10-31 13:55:17,229 | INFO     | monitor loop #728: job 0:6384990431 is in state 'finished'
[2024-10-31 09:55:34] 2024-10-31 13:55:17,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 09:55:34] 2024-10-31 13:55:19,596 | INFO     | CPU arch script returned: x86-64-v4
[2024-10-31 09:55:34] 2024-10-31 13:55:19,596 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6384990431/memory_monitor_summary.json (trf name=prmon)
[2024-10-31 09:55:34] 2024-10-31 13:55:19,597 | INFO     | extracted standard info from prmon json
[2024-10-31 09:55:34] 2024-10-31 13:55:19,598 | INFO     | extracted standard memory fields from prmon json
[2024-10-31 09:55:34] 2024-10-31 13:55:19,598 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-31 09:55:34] 2024-10-31 13:55:19,602 | INFO     | fitting pss+swap vs Time
[2024-10-31 09:55:34] 2024-10-31 13:55:19,603 | INFO     | model: linear, x: [1730373403.0, 1730373464.0, 1730373525.0, 1730373586.0, 1730373647.0, 1730373708.0, 1730373769.0, 1730373830.0, 1730373891.0, 1730373952.0, 1730
[2024-10-31 09:55:34] 2024-10-31 13:55:19,603 | INFO     | sum of square deviations: 1177569056.0192287
[2024-10-31 09:55:34] 2024-10-31 13:55:19,604 | INFO     | sum of deviations: 262014920385.63467
[2024-10-31 09:55:34] 2024-10-31 13:55:19,604 | INFO     | mean x: 1730378131.2884614
[2024-10-31 09:55:34] 2024-10-31 13:55:19,604 | INFO     | mean y: 1643558.8525641025
[2024-10-31 09:55:34] 2024-10-31 13:55:19,604 | INFO     | -- intersect: -385016021425.70197
[2024-10-31 09:55:34] 2024-10-31 13:55:19,604 | INFO     | intersect: -385016021425.70197
[2024-10-31 09:55:34] 2024-10-31 13:55:19,605 | INFO     | chi2: 30.956479393250582
[2024-10-31 09:55:34] 2024-10-31 13:55:19,605 | INFO     | model: linear, x: [1730373403.0, 1730373464.0, 1730373525.0, 1730373586.0, 1730373647.0, 1730373708.0, 1730373769.0, 1730373830.0, 1730373891.0, 1730373952.0, 1730
[2024-10-31 09:55:34] 2024-10-31 13:55:19,605 | INFO     | sum of square deviations: 1068004512.8079482
[2024-10-31 09:55:34] 2024-10-31 13:55:19,606 | INFO     | sum of deviations: 287136525513.37103
[2024-10-31 09:55:34] 2024-10-31 13:55:19,606 | INFO     | mean x: 1730377978.8145695
[2024-10-31 09:55:34] 2024-10-31 13:55:19,606 | INFO     | mean y: 1678568.013245033
[2024-10-31 09:55:34] 2024-10-31 13:55:19,606 | INFO     | -- intersect: -465216131565.9136
[2024-10-31 09:55:34] 2024-10-31 13:55:19,606 | INFO     | intersect: -465216131565.9136
[2024-10-31 09:55:34] 2024-10-31 13:55:19,607 | INFO     | chi2: 23.30958009270828
[2024-10-31 09:55:34] 2024-10-31 13:55:19,607 | INFO     | current chi2=23.30958009270828 (change=24.70209613761683 %)
[2024-10-31 09:55:34] 2024-10-31 13:55:19,607 | INFO     | right removable region: 150
[2024-10-31 09:55:34] 2024-10-31 13:55:19,607 | INFO     | model: linear, x: [1730373708.0, 1730373769.0, 1730373830.0, 1730373891.0, 1730373952.0, 1730374013.0, 1730374074.0, 1730374135.0, 1730374196.0, 1730374257.0, 1730
[2024-10-31 09:55:34] 2024-10-31 13:55:19,607 | INFO     | sum of square deviations: 1067929482.8079482
[2024-10-31 09:55:34] 2024-10-31 13:55:19,608 | INFO     | sum of deviations: 223751481351.5565
[2024-10-31 09:55:34] 2024-10-31 13:55:19,608 | INFO     | mean x: 1730378283.8145695
[2024-10-31 09:55:34] 2024-10-31 13:55:19,608 | INFO     | mean y: 1696783.0198675497
[2024-10-31 09:55:34] 2024-10-31 13:55:19,608 | INFO     | -- intersect: -362545372602.1801
[2024-10-31 09:55:34] 2024-10-31 13:55:19,608 | INFO     | intersect: -362545372602.1801
[2024-10-31 09:55:34] 2024-10-31 13:55:19,608 | INFO     | chi2: 27.161243161919458
[2024-10-31 09:55:34] 2024-10-31 13:55:19,609 | INFO     | current chi2=27.161243161919458 (change=12.25990909082057 %)
[2024-10-31 09:55:34] 2024-10-31 13:55:19,609 | INFO     | left removable region: 10
[2024-10-31 09:55:34] 2024-10-31 13:55:19,609 | INFO     | model: linear, x: [1730374013.0, 1730374074.0, 1730374135.0, 1730374196.0, 1730374257.0, 1730374318.0, 1730374379.0, 1730374440.0, 1730374501.0, 1730374562.0, 1730
[2024-10-31 09:55:34] 2024-10-31 13:55:19,609 | INFO     | sum of square deviations: 851207332.9357142
[2024-10-31 09:55:34] 2024-10-31 13:55:19,610 | INFO     | sum of deviations: 221977202069.94992
[2024-10-31 09:55:34] 2024-10-31 13:55:19,610 | INFO     | mean x: 1730378253.3785715
[2024-10-31 09:55:34] 2024-10-31 13:55:19,610 | INFO     | mean y: 1800997.85
[2024-10-31 09:55:34] 2024-10-31 13:55:19,610 | INFO     | -- intersect: -451244926262.9817
[2024-10-31 09:55:34] 2024-10-31 13:55:19,610 | INFO     | intersect: -451244926262.9817
[2024-10-31 09:55:34] 2024-10-31 13:55:19,610 | INFO     | chi2: 16.026775863194676
[2024-10-31 09:55:34] 2024-10-31 13:55:19,610 | INFO     | -- intersect: -451244926262.9817
[2024-10-31 09:55:34] 2024-10-31 13:55:19,611 | INFO     | current memory leak: 260.78 B/s (using 140 data points, chi2=16.03)
[2024-10-31 09:55:34] 2024-10-31 13:55:19,611 | INFO     | ..............................
[2024-10-31 09:55:34] 2024-10-31 13:55:19,611 | INFO     | . Timing measurements:
[2024-10-31 09:55:34] 2024-10-31 13:55:19,611 | INFO     | . get job = 0 s
[2024-10-31 09:55:34] 2024-10-31 13:55:19,611 | INFO     | . initial setup = 6 s
[2024-10-31 09:55:34] 2024-10-31 13:55:19,611 | INFO     | . payload setup = 138 s
[2024-10-31 09:55:34] 2024-10-31 13:55:19,611 | INFO     | . stage-in = 0 s
[2024-10-31 09:55:34] 2024-10-31 13:55:19,612 | INFO     | . payload execution = 9600 s
[2024-10-31 09:55:34] 2024-10-31 13:55:19,612 | INFO     | . stage-out = 1 s
[2024-10-31 09:55:34] 2024-10-31 13:55:19,612 | INFO     | . log creation = 0 s
[2024-10-31 09:55:34] 2024-10-31 13:55:19,612 | INFO     | ..............................
[2024-10-31 09:55:34] 2024-10-31 13:55:19,731 | INFO     | 
[2024-10-31 09:55:34] 2024-10-31 13:55:19,731 | INFO     | job summary report
[2024-10-31 09:55:34] 2024-10-31 13:55:19,731 | INFO     | --------------------------------------------------
[2024-10-31 09:55:34] 2024-10-31 13:55:19,731 | INFO     | PanDA job id: 6384990431
[2024-10-31 09:55:34] 2024-10-31 13:55:19,731 | INFO     | task id: 41843712
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | errors: (none)
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | pilot state: finished 
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | transexitcode: 0
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | exeerrorcode: 0
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | exeerrordiag: 
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | exitcode: 0
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | exitmsg: OK
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | cpuconsumptiontime: 15857 s
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | nevents: 50
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | neventsw: 0
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | pid: 325593
[2024-10-31 09:55:34] 2024-10-31 13:55:19,732 | INFO     | pgrp: 325593
[2024-10-31 09:55:34] 2024-10-31 13:55:19,733 | INFO     | corecount: 8
[2024-10-31 09:55:34] 2024-10-31 13:55:19,733 | INFO     | event service: False
[2024-10-31 09:55:34] 2024-10-31 13:55:19,733 | INFO     | sizes: {0: 2428321, 1: 2428520, 2: 2428520, 13: 2428548, 23: 2428604, 34: 2428632, 44: 2428994, 46: 2429022, 9742: 2458169, 9744: 2467245, 9755: 2467411}
[2024-10-31 09:55:34] 2024-10-31 13:55:19,733 | INFO     | --------------------------------------------------
[2024-10-31 09:55:34] 2024-10-31 13:55:19,733 | INFO     | 
[2024-10-31 09:55:34] 2024-10-31 13:55:19,733 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-10-31 09:55:34] 2024-10-31 13:55:19,930 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,930 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,930 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,930 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,932 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-31 09:55:34] 2024-10-31 13:55:19,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,932 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-31 09:55:34] 2024-10-31 13:55:19,932 | INFO     | job 6384990431 has completed (purged errors)
[2024-10-31 09:55:34] 2024-10-31 13:55:19,932 | INFO     | overall cleanup function is called
[2024-10-31 09:55:34] 2024-10-31 13:55:20,956 | INFO     | --- collectZombieJob: --- 10, [325593]
[2024-10-31 09:55:34] 2024-10-31 13:55:20,956 | INFO     | zombie collector waiting for pid 325593
[2024-10-31 09:55:34] 2024-10-31 13:55:20,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-31 09:55:34] 2024-10-31 13:55:20,956 | INFO     | collected zombie processes
[2024-10-31 09:55:34] 2024-10-31 13:55:20,956 | INFO     | will attempt to kill all subprocesses of pid=325593
[2024-10-31 09:55:34] 2024-10-31 13:55:21,201 | INFO     | process IDs to be killed: [325593] (in reverse order)
[2024-10-31 09:55:34] 2024-10-31 13:55:21,367 | WARNING  | found no corresponding commands to process id(s)
[2024-10-31 09:55:34] 2024-10-31 13:55:21,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-31 09:55:34] 2024-10-31 13:55:21,380 | INFO     | did not find any defunct processes belonging to 325593
[2024-10-31 09:55:34] 2024-10-31 13:55:21,391 | INFO     | did not find any defunct processes belonging to 325593
[2024-10-31 09:55:34] 2024-10-31 13:55:21,391 | INFO     | ready for new job
[2024-10-31 09:55:34] 2024-10-31 13:55:21,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-31 09:55:34] 2024-10-31 13:55:21,393 | INFO     | **************************************
[2024-10-31 09:55:34] 2024-10-31 13:55:21,393 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-31 09:55:34] 2024-10-31 13:55:21,393 | INFO     | **************************************
[2024-10-31 09:55:34] 2024-10-31 13:55:21,393 | INFO     | 
[2024-10-31 09:55:34] 2024-10-31 13:55:21,399 | INFO     | architecture information:
[2024-10-31 09:55:34] 2024-10-31 13:55:21,407 | INFO     | executing command: cat /etc/os-release
[2024-10-31 09:55:34] 2024-10-31 13:55:21,481 | INFO     | cat /etc/os-release:
[2024-10-31 09:55:34] NAME="CentOS Linux"
[2024-10-31 09:55:34] VERSION="7 (Core)"
[2024-10-31 09:55:34] ID="centos"
[2024-10-31 09:55:34] ID_LIKE="rhel fedora"
[2024-10-31 09:55:34] VERSION_ID="7"
[2024-10-31 09:55:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-31 09:55:34] ANSI_COLOR="0;31"
[2024-10-31 09:55:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-31 09:55:34] HOME_URL="https://www.centos.org/"
[2024-10-31 09:55:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-31 09:55:34] 
[2024-10-31 09:55:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-31 09:55:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-31 09:55:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-31 09:55:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-31 09:55:34] 
[2024-10-31 09:55:34] 2024-10-31 13:55:21,481 | INFO     | **************************************
[2024-10-31 09:55:34] 2024-10-31 13:55:21,984 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-10-31 09:55:34] 2024-10-31 13:55:22,022 | INFO     | sufficient remaining disk space (101843992576 B)
[2024-10-31 09:55:34] 2024-10-31 13:55:22,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-31 09:55:34] 2024-10-31 13:55:22,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-31 09:55:34] 2024-10-31 13:55:22,023 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-31 09:55:34] 2024-10-31 13:55:22,023 | INFO     | found 0 job(s) in 20 queues
[2024-10-31 09:55:34] 2024-10-31 13:55:22,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-31 09:55:34] 2024-10-31 13:55:22,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-31 09:55:34] 2024-10-31 13:55:22,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-31 09:55:34] 2024-10-31 13:55:22,041 | INFO     | all data control threads have been joined
[2024-10-31 09:55:34] 2024-10-31 13:55:22,238 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-31 09:55:34] 2024-10-31 13:55:22,238 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-31 09:55:34] 2024-10-31 13:55:22,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-31 09:55:34] 2024-10-31 13:55:22,238 | INFO     | will abort loop
[2024-10-31 09:55:34] 2024-10-31 13:55:22,647 | INFO     | all job control threads have been joined
[2024-10-31 09:55:34] 2024-10-31 13:55:23,028 | INFO     | [job] retrieve thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:23,046 | INFO     | [data] control thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:23,114 | INFO     | [payload] failed_post thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:23,168 | INFO     | [job] validate thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:23,244 | INFO     | [job] job monitor thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:23,338 | INFO     | [data] copytool_in thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:23,447 | INFO     | all payload control threads have been joined
[2024-10-31 09:55:34] 2024-10-31 13:55:23,653 | INFO     | [job] control thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:23,753 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:23,920 | INFO     | [payload] validate_post thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:24,029 | INFO     | [data] copytool_out thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:24,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-31 09:55:34] 2024-10-31 13:55:24,180 | INFO     | [job] create_data_payload thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:24,339 | INFO     | [payload] execute_payloads thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:24,448 | INFO     | [payload] control thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:24,530 | INFO     | [payload] validate_pre thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:24,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-31 09:55:34] 2024-10-31 13:55:25,751 | INFO     | [job] queue monitor thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:28,079 | INFO     | [data] queue_monitor thread has finished
[2024-10-31 09:55:34] 2024-10-31 13:55:28,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140634281527104)>', '<ExcThread(monitor, started 140633889019648)>']
[2024-10-31 09:55:34] 2024-10-31 13:55:29,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-31 09:55:34] 2024-10-31 13:55:29,067 | INFO     | [monitor] control thread has ended
[2024-10-31 09:55:34] 2024-10-31 13:55:34,023 | INFO     | all workflow threads have been joined
[2024-10-31 09:55:34] 2024-10-31 13:55:34,023 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-31 09:55:34] 2024-10-31 13:55:34,023 | INFO     | traces error code: 0
[2024-10-31 09:55:34] 2024-10-31 13:55:34,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-31 09:55:34] 2024-10-31 13:55:34,204 [wrapper] ==== pilot stdout END ====
[2024-10-31 09:55:34] 2024-10-31 13:55:34,209 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-31 09:55:34] 2024-10-31 13:55:34,212 [wrapper] pilotpid: 248220
[2024-10-31 09:55:34] 2024-10-31 13:55:34,215 [wrapper] Pilot exit status: 0
[2024-10-31 09:55:34] 2024-10-31 13:55:34,231 [wrapper] pandaids: 6384990431
[2024-10-31 09:55:34] 2024-10-31 13:55:34,312 [wrapper] cleanup supervisor_pilot  63432 248221
[2024-10-31 09:55:34] 2024-10-31 13:55:34,317 [wrapper] Test setup, not cleaning
[2024-10-31 09:55:34] 2024-10-31 13:55:34,320 [wrapper] ==== wrapper stdout END ====
[2024-10-31 09:55:34] 2024-10-31 13:55:34,323 [wrapper] ==== wrapper stderr END ====
[2024-10-31 09:55:34] 2024-10-31 13:55:34,329 [wrapper] apfmon messages muted
[2024-10-31 09:55:34]  *** Error codes and diagnostics ***
[2024-10-31 09:55:34]     "exeErrorCode": 0,
[2024-10-31 09:55:34]     "exeErrorDiag": "",
[2024-10-31 09:55:34]     "pilotErrorCode": 0,
[2024-10-31 09:55:34]     "pilotErrorDiag": "",
[2024-10-31 09:55:34]  *** Listing of results directory ***
[2024-10-31 09:55:34] total 435980
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas    486088 Oct 31 06:17 pilot3.tar.gz
[2024-10-31 09:55:34] -rwx------ 1 boincer umatlas     34589 Oct 31 06:34 runpilot2-wrapper.sh
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas      5652 Oct 31 06:34 queuedata.json
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas       100 Oct 31 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-31 09:55:34] -rwxr-xr-x 1 boincer umatlas      7986 Oct 31 07:07 run_atlas
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas       105 Oct 31 07:07 job.xml
[2024-10-31 09:55:34] -rw-r--r-- 2 boincer umatlas 384056678 Oct 31 07:07 EVNT.41780282._000006.pool.root.1
[2024-10-31 09:55:34] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 07:07 start_atlas.sh
[2024-10-31 09:55:34] drwxrwx--x 2 boincer umatlas      4096 Oct 31 07:07 shared
[2024-10-31 09:55:34] -rw-r--r-- 2 boincer umatlas    499917 Oct 31 07:07 input.tar.gz
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas         0 Oct 31 07:07 boinc_lockfile
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas      2893 Oct 31 07:08 pandaJob.out
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas       467 Oct 31 07:08 setup.sh.local
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas   1030018 Oct 31 07:10 agis_schedconf.cvmfs.json
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas   1611897 Oct 31 07:10 agis_ddmendpoints.agis.ALL.json
[2024-10-31 09:55:34] drwx------ 4 boincer umatlas      4096 Oct 31 07:10 pilot3
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas       530 Oct 31 09:36 boinc_task_state.xml
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas      6385 Oct 31 09:45 init_data.xml
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas        95 Oct 31 09:54 pilot_heartbeat.json
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas  54268826 Oct 31 09:54 HITS.41843712._006767.pool.root.1
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas      1068 Oct 31 09:55 memory_monitor_summary.json
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas   1255670 Oct 31 09:55 log.41843712._006767.job.log.tgz.1
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas      8591 Oct 31 09:55 heartbeat.json
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas        27 Oct 31 09:55 wrapper_checkpoint.txt
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas      8192 Oct 31 09:55 boinc_mmap_file
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas      4525 Oct 31 09:55 pilotlog.txt
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas    864393 Oct 31 09:55 log.41843712._006767.job.log.1
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas       353 Oct 31 09:55 output.list
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas       620 Oct 31 09:55 runtime_log
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas   2140160 Oct 31 09:55 result.tar.gz
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas     11429 Oct 31 09:55 runtime_log.err
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas       662 Oct 31 09:55 9x0MDm0ghQ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmKZPMDmpHvVem.diag
[2024-10-31 09:55:34] -rw-r--r-- 1 boincer umatlas     21926 Oct 31 09:55 stderr.txt
[2024-10-31 09:55:34] HITS file was successfully produced:
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas 54268826 Oct 31 09:54 shared/HITS.pool.root.1
[2024-10-31 09:55:34]  *** Contents of shared directory: ***
[2024-10-31 09:55:34] total 430664
[2024-10-31 09:55:34] -rw-r--r-- 2 boincer umatlas 384056678 Oct 31 07:07 ATLAS.root_0
[2024-10-31 09:55:34] -rw-r--r-- 2 boincer umatlas     17569 Oct 31 07:07 start_atlas.sh
[2024-10-31 09:55:34] -rw-r--r-- 2 boincer umatlas    499917 Oct 31 07:07 input.tar.gz
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas  54268826 Oct 31 09:54 HITS.pool.root.1
[2024-10-31 09:55:34] -rw------- 1 boincer umatlas   2140160 Oct 31 09:55 result.tar.gz
09:55:36 (229751): run_atlas exited; CPU time 15648.876840
09:55:36 (229751): called boinc_finish(0)

</stderr_txt>
]]>

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