Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2024-10-31 14:30:42 (130998): Detected: vboxwrapper 26206
2024-10-31 14:30:42 (130998): Detected: BOINC client v8.0.4
2024-10-31 14:30:42 (130998): Detected: VirtualBox VboxManage Interface (Version: 7.1.0)
2024-10-31 14:30:42 (130998): Successfully copied 'init_data.xml' to the shared directory.
2024-10-31 14:30:42 (130998): Create VM. (boinc_77c86a326d912cfe, slot#0)
2024-10-31 14:30:42 (130998): Setting Memory Size for VM. (4800MB)
2024-10-31 14:30:42 (130998): Setting CPU Count for VM. (8)
2024-10-31 14:30:42 (130998): Setting Chipset Options for VM.
2024-10-31 14:30:42 (130998): Setting Graphics Controller Options for VM.
2024-10-31 14:30:42 (130998): Setting Boot Options for VM.
2024-10-31 14:30:42 (130998): Setting Network Configuration for NAT.
2024-10-31 14:30:42 (130998): Enabling VM Network Access.
2024-10-31 14:30:42 (130998): Disabling USB Support for VM.
2024-10-31 14:30:42 (130998): Disabling COM Port Support for VM.
2024-10-31 14:30:42 (130998): Disabling LPT Port Support for VM.
2024-10-31 14:30:42 (130998): Disabling Audio Support for VM.
2024-10-31 14:30:42 (130998): Disabling Clipboard Support for VM.
2024-10-31 14:30:42 (130998): Disabling Drag and Drop Support for VM.
2024-10-31 14:30:42 (130998): Adding storage controller(s) to VM.
2024-10-31 14:30:42 (130998): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-10-31 14:30:44 (130998): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-10-31 14:30:44 (130998): forwarding host port 47505 to guest port 80
2024-10-31 14:30:44 (130998): Enabling remote desktop for VM.
2024-10-31 14:30:44 (130998): Required extension pack not installed, remote desktop not enabled.
2024-10-31 14:30:44 (130998): Enabling shared directory for VM.
2024-10-31 14:30:44 (130998): Starting VM using VBoxManage interface. (boinc_77c86a326d912cfe, slot#0)
2024-10-31 14:30:45 (130998): Successfully started VM. (PID = '131275')
2024-10-31 14:30:45 (130998): Reporting VM Process ID to BOINC.
2024-10-31 14:30:45 (130998): Guest Log: BIOS: VirtualBox 7.1.0
2024-10-31 14:30:45 (130998): Guest Log: CPUID EDX: 0x178bfbff
2024-10-31 14:30:45 (130998): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-10-31 14:30:45 (130998): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-10-31 14:30:45 (130998): VM state change detected. (old = 'poweredoff', new = 'running')
2024-10-31 14:30:45 (130998): Detected: Web Application Enabled (http://localhost:47505)
2024-10-31 14:30:45 (130998): Preference change detected
2024-10-31 14:30:45 (130998): Setting CPU throttle for VM. (50%)
2024-10-31 14:30:45 (130998): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-10-31 14:30:47 (130998): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-10-31 14:30:47 (130998): Guest Log: BIOS: Booting from Hard Disk...
2024-10-31 14:30:50 (130998): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-10-31 14:30:50 (130998): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-10-31 14:30:50 (130998): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-10-31 14:31:00 (130998): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-10-31 14:31:00 (130998): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-10-31 14:31:07 (130998): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-10-31 14:31:07 (130998): Guest Log: 00:00:00.000212 main     Log opened 2024-10-31T13:31:05.718433000Z
2024-10-31 14:31:07 (130998): Guest Log: 00:00:00.000305 main     OS Product: Linux
2024-10-31 14:31:07 (130998): Guest Log: 00:00:00.000322 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-10-31 14:31:07 (130998): Guest Log: 00:00:00.000332 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-10-31 14:31:07 (130998): Guest Log: 00:00:00.000341 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-10-31 14:31:07 (130998): Guest Log: 00:00:00.000341 main     Process ID: 1363
2024-10-31 14:31:07 (130998): Guest Log: 00:00:00.000341 main     Package type: LINUX_64BITS_GENERIC
2024-10-31 14:31:07 (130998): Guest Log: 00:00:00.000913 main     5.2.32 r132073 started. Verbose level = 0
2024-10-31 14:31:07 (130998): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-10-31 14:31:07 (130998): Guest Log: [INFO] Mounting shared directory
2024-10-31 14:31:07 (130998): Guest Log: [INFO] Checking for init_data.xml
2024-10-31 14:31:10 (130998): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-10-31 14:31:10 (130998): Guest Log: [INFO] Detected branch: prod
2024-10-31 14:31:10 (130998): Guest Log: This is the prod version of the ATLAS job wrapper
2024-10-31 14:31:10 (130998): Guest Log: Copying input files
2024-10-31 14:31:12 (130998): Guest Log: Copied input files into RunAtlas.
2024-10-31 14:31:12 (130998): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-10-31 14:31:12 (130998): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-10-31 14:31:12 (130998): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-10-31 14:31:12 (130998): Guest Log: Further information can be found at the LHC@home message board.
2024-10-31 14:31:20 (130998): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-10-31 14:31:20 (130998): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-10-31 14:31:20 (130998): Guest Log: 2.6.3.0 1637 0 30228 138944 4 1 3117399 4096000 0 65024 0 0 n/a 1 8 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-10-31 14:31:21 (130998): Guest Log: copied the webapp to /var/www
2024-10-31 14:31:21 (130998): Guest Log: ATHENA_PROC_NUMBER=8
2024-10-31 14:31:21 (130998): Guest Log: ATHENA_CORE_NUMBER=8
2024-10-31 14:31:21 (130998): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-10-31 14:31:21 (130998): Guest Log:  *** Starting ATLAS job. (PandaID=6384544258 taskID=41843988) ***
2024-10-31 15:11:46 (130998): VM state change detected. (old = 'running', new = 'paused')
2024-10-31 15:12:06 (130998): VM state change detected. (old = 'paused', new = 'running')
2024-10-31 15:53:50 (130998): VM state change detected. (old = 'running', new = 'paused')
2024-10-31 15:54:10 (130998): VM state change detected. (old = 'paused', new = 'running')
2024-10-31 16:03:53 (130998): VM state change detected. (old = 'running', new = 'paused')
2024-10-31 16:04:13 (130998): VM state change detected. (old = 'paused', new = 'running')
2024-10-31 16:10:48 (130998): Status Report: Elapsed Time: '6000.000000'
2024-10-31 16:10:48 (130998): Status Report: CPU Time: '15854.980000'
2024-10-31 16:39:05 (130998): VM state change detected. (old = 'running', new = 'paused')
2024-10-31 16:58:30 (130998): VM state change detected. (old = 'paused', new = 'running')
2024-10-31 18:09:14 (130998): Status Report: Elapsed Time: '12000.000000'
2024-10-31 18:09:14 (130998): Status Report: CPU Time: '38569.940000'
2024-10-31 18:36:23 (130998): Guest Log:  *** Job finished ***
2024-10-31 18:36:23 (130998): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:09,912 | INFO     | [data] queue_monitor thread has finished
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:14,173 | INFO     | job.realtimelogging is not enabled
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:15,175 | INFO     | [payload] run_realtimelog thread has finished
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:16,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076585486144)>', '<ExcThread(monitor, started 140076281468672)>']
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:17,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:17,100 | INFO     | [monitor] control thread has ended
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,509 | INFO     | all workflow threads have been joined
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,509 | INFO     | end of generic workflow (traces error code: 0)
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,509 | INFO     | traces error code: 0
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,656 [wrapper] ==== pilot stdout END ====
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,660 [wrapper] ==== wrapper stdout RESUME ====
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,664 [wrapper] pilotpid: 6010
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,668 [wrapper] Pilot exit status: 0
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,683 [wrapper] pandaids: 6384544258
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,707 [wrapper] cleanup supervisor_pilot 15800 6011
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,711 [wrapper] Test setup, not cleaning
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,715 [wrapper] ==== wrapper stdout END ====
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,719 [wrapper] ==== wrapper stderr END ====
2024-10-31 18:36:23 (130998): Guest Log: 2024-10-31 17:36:21,728 [wrapper] apfmon messages muted
2024-10-31 18:36:23 (130998): Guest Log:  *** Error codes and diagnostics ***
2024-10-31 18:36:23 (130998): Guest Log:     "exeErrorCode": 0,
2024-10-31 18:36:23 (130998): Guest Log:     "exeErrorDiag": "",
2024-10-31 18:36:23 (130998): Guest Log:     "pilotErrorCode": 0,
2024-10-31 18:36:23 (130998): Guest Log:     "pilotErrorDiag": "",
2024-10-31 18:36:23 (130998): Guest Log:  *** Listing of results directory ***
2024-10-31 18:36:23 (130998): Guest Log: total 263268
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 atlas atlas    486088 Oct 31 03:59 pilot3.tar.gz
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 atlas atlas      5652 Oct 31 04:04 queuedata.json
2024-10-31 18:36:23 (130998): Guest Log: -rwx------. 1 atlas atlas     34589 Oct 31 04:04 runpilot2-wrapper.sh
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Oct 31 13:31 start_atlas.sh
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 atlas atlas    499915 Oct 31 13:31 input.tar.gz
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 atlas atlas      6828 Oct 31 13:31 init_data.xml
2024-10-31 18:36:23 (130998): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 31 13:31 EVNT.41779578._000003.pool.root.1 -> /data/./ATLAS.root_0
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 atlas atlas      2900 Oct 31 13:31 pandaJob.out
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas       424 Oct 31 13:31 setup.sh.local
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas   1030026 Oct 31 13:31 agis_schedconf.cvmfs.json
2024-10-31 18:36:23 (130998): Guest Log: drwx------. 4 atlas atlas      4096 Oct 31 13:31 pilot3
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas        97 Oct 31 17:35 pilot_heartbeat.json
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas 261534161 Oct 31 17:35 HITS.41843988._000113.pool.root.1
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas      1053 Oct 31 17:35 memory_monitor_summary.json
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas   1602446 Oct 31 17:35 agis_ddmendpoints.agis.ALL.json
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas   1319566 Oct 31 17:35 log.41843988._000113.job.log.tgz.1
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas      8616 Oct 31 17:36 heartbeat.json
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas      4347 Oct 31 17:36 pilotlog.txt
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas    806811 Oct 31 17:36 log.41843988._000113.job.log.1
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas       353 Oct 31 17:36 output.list
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 31 17:36 runtime_log
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas   2150400 Oct 31 17:36 result.tar.gz
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas       690 Oct 31 17:36 Xj8KDm2abQ6n9Rq4apOajLDm4fhM0noT9bVorHsSDmUeVLDmFG3dem.diag
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 atlas atlas     11028 Oct 31 17:36 runtime_log.err
2024-10-31 18:36:23 (130998): Guest Log: Looking for outputfile HITS.41843988._000113.pool.root.1
2024-10-31 18:36:23 (130998): Guest Log: HITS file was successfully produced
2024-10-31 18:36:23 (130998): Guest Log: -rw-------. 1 atlas atlas 261534161 Oct 31 17:35 /home/atlas/RunAtlas/HITS.41843988._000113.pool.root.1
2024-10-31 18:36:23 (130998): Guest Log: Successfully finished the ATLAS job!
2024-10-31 18:36:23 (130998): Guest Log: Copying the results back to the shared directory!
2024-10-31 18:36:23 (130998): Guest Log:  *** Contents of shared directory: ***
2024-10-31 18:36:23 (130998): Guest Log: total 379032
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 root root 385445347 Oct 31 13:30 ATLAS.root_0
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 root root      6828 Oct 31 13:30 init_data.xml
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 root root    499915 Oct 31 13:30 input.tar.gz
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 root root   2150400 Oct 31  2024 result.tar.gz
2024-10-31 18:36:23 (130998): Guest Log: -rw-r--r--. 1 root root     17569 Oct 31 13:30 start_atlas.sh
2024-10-31 18:36:23 (130998): Guest Log:  *** Success! Shutting down the machine. ***
2024-10-31 18:36:23 (130998): VM Completion File Detected.
2024-10-31 18:36:23 (130998): Powering off VM.
2024-10-31 18:36:24 (130998): Successfully stopped VM.
2024-10-31 18:36:24 (130998): Deregistering VM. (boinc_77c86a326d912cfe, slot#0)
2024-10-31 18:36:24 (130998): Removing network bandwidth throttle group from VM.
2024-10-31 18:36:24 (130998): Removing VM from VirtualBox.
18:36:29 (130998): called boinc_finish(0)

</stderr_txt>
]]>

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