Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:12:52 (40684): wrapper (7.7.26015): starting
21:12:52 (40684): wrapper: running run_atlas (--nthreads 8)
[2024-10-30 21:12:52] Arguments: --nthreads 8
[2024-10-30 21:12:52] Threads: 8
[2024-10-30 21:12:52] Checking for CVMFS
[2024-10-30 21:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-30 21:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-30 21:12:53] Running cvmfs_config stat atlas.cern.ch
[2024-10-30 21:12:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-30 21:12:53] 2.11.2.0 32619 1689 171664 138922 3 335 12610403 18432001 17549 130560 0 20806145 99.046 43301341 58129 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-10-30 21:12:53] CVMFS is ok
[2024-10-30 21:12:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-30 21:12:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-30 21:12:53] Further information can be found at the LHC@home message board.
[2024-10-30 21:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-30 21:12:53] Checking for apptainer binary...
[2024-10-30 21:12:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-30 21:12:53] Running /usr/bin/apptainer --version
[2024-10-30 21:12:53] apptainer version 1.3.2-1.el7
[2024-10-30 21:12:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-30 21:12:54] c-212-7.aglt2.org
[2024-10-30 21:12:54] apptainer works
[2024-10-30 21:12:54] Set ATHENA_PROC_NUMBER=8
[2024-10-30 21:12:54] Set ATHENA_CORE_NUMBER=8
[2024-10-30 21:12:54] Starting ATLAS job with PandaID=6384342340
[2024-10-30 21:12:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-30 22:37:06]  *** The last 200 lines of the pilot log: ***
[2024-10-30 22:37:06]  mtime=0
[2024-10-30 22:37:06]  protocol_id=None
[2024-10-30 22:37:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-30 22:37:06]  replicas=None
[2024-10-30 22:37:06]  scope=mc16_13TeV
[2024-10-30 22:37:06]  status=None
[2024-10-30 22:37:06]  status_code=0
[2024-10-30 22:37:06]  storage_token=
[2024-10-30 22:37:06]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6384342340/log.41843676._016276.job.log.tgz.1
[2024-10-30 22:37:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/2c/79/log.41843676._016276.job.log.tgz.1
[2024-10-30 22:37:06]  workdir=None
[2024-10-30 22:37:06] ]
[2024-10-30 22:37:06] 2024-10-31 02:36:33,618 | INFO     | transferring file log.41843676._016276.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6384342340/log.41843676._016276.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-10-30 22:37:06] 2024-10-31 02:36:33,618 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6384342340/log.41843676._016276.job.log.tgz.1 /tmp/boinchome/slots/4/log.41843676._016276.job
[2024-10-30 22:37:06] 2024-10-31 02:36:33,718 | INFO     | adding to output.list: log.41843676._016276.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/2c/79/log.41843676._016276.job.log.tgz.
[2024-10-30 22:37:06] 2024-10-31 02:36:33,719 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-30 22:37:06] 2024-10-31 02:36:33,719 | INFO     | summary of transferred files:
[2024-10-30 22:37:06] 2024-10-31 02:36:33,719 | INFO     |  -- lfn=log.41843676._016276.job.log.tgz.1, status_code=0, status=transferred
[2024-10-30 22:37:06] 2024-10-31 02:36:33,719 | INFO     | stage-out finished correctly
[2024-10-30 22:37:06] 2024-10-31 02:36:35,942 | INFO     | monitor loop #383: job 0:6384342340 is in state 'finished'
[2024-10-30 22:37:06] 2024-10-31 02:36:35,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-30 22:37:06] 2024-10-31 02:36:36,665 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-30 22:37:06] 2024-10-31 02:36:37,624 | INFO     | job 6384342340 has state=finished
[2024-10-30 22:37:06] 2024-10-31 02:36:37,625 | INFO     | preparing for final server update for job 6384342340 in state='finished'
[2024-10-30 22:37:06] 2024-10-31 02:36:37,625 | INFO     | this job has now completed (state=finished)
[2024-10-30 22:37:06] 2024-10-31 02:36:37,625 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-30 22:37:06] 2024-10-31 02:36:37,625 | INFO     | log transfer has been attempted: DONE
[2024-10-30 22:37:06] 2024-10-31 02:36:37,625 | INFO     | job 6384342340 has finished - writing final server update
[2024-10-30 22:37:06] 2024-10-31 02:36:37,626 | INFO     | total number of processed events: 50 (read)
[2024-10-30 22:37:06] 2024-10-31 02:36:37,645 | INFO     | executing command: lscpu
[2024-10-30 22:37:06] 2024-10-31 02:36:37,686 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-10-30 22:37:06] 2024-10-31 02:36:37,749 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-30 22:37:06] 2024-10-31 02:36:38,446 | INFO     | monitor loop #384: job 0:6384342340 is in state 'finished'
[2024-10-30 22:37:06] 2024-10-31 02:36:38,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-30 22:37:06] 2024-10-31 02:36:40,950 | INFO     | monitor loop #385: job 0:6384342340 is in state 'finished'
[2024-10-30 22:37:06] 2024-10-31 02:36:40,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-30 22:37:06] 2024-10-31 02:36:43,458 | INFO     | monitor loop #386: job 0:6384342340 is in state 'finished'
[2024-10-30 22:37:06] 2024-10-31 02:36:43,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-30 22:37:06] 2024-10-31 02:36:45,965 | INFO     | monitor loop #387: job 0:6384342340 is in state 'finished'
[2024-10-30 22:37:06] 2024-10-31 02:36:45,966 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-30 22:37:06] 2024-10-31 02:36:48,471 | INFO     | monitor loop #388: job 0:6384342340 is in state 'finished'
[2024-10-30 22:37:06] 2024-10-31 02:36:48,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-30 22:37:06] 2024-10-31 02:36:50,900 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-30 22:37:06] 2024-10-31 02:36:50,901 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6384342340/memory_monitor_summary.json (trf name=prmon)
[2024-10-30 22:37:06] 2024-10-31 02:36:50,901 | INFO     | extracted standard info from prmon json
[2024-10-30 22:37:06] 2024-10-31 02:36:50,901 | INFO     | extracted standard memory fields from prmon json
[2024-10-30 22:37:06] 2024-10-31 02:36:50,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-30 22:37:06] 2024-10-31 02:36:50,903 | INFO     | fitting pss+swap vs Time
[2024-10-30 22:37:06] 2024-10-31 02:36:50,907 | INFO     | model: linear, x: [1730337541.0, 1730337602.0, 1730337663.0, 1730337724.0, 1730337785.0, 1730337846.0, 1730337907.0, 1730337968.0, 1730338029.0, 1730338090.0, 1730
[2024-10-30 22:37:06] 2024-10-31 02:36:50,907 | INFO     | sum of square deviations: 130800350.88000003
[2024-10-30 22:37:06] 2024-10-31 02:36:50,908 | INFO     | sum of deviations: 39865714067.63998
[2024-10-30 22:37:06] 2024-10-31 02:36:50,908 | INFO     | mean x: 1730339798.04
[2024-10-30 22:37:06] 2024-10-31 02:36:50,908 | INFO     | mean y: 1705716.7866666666
[2024-10-30 22:37:06] 2024-10-31 02:36:50,908 | INFO     | -- intersect: -527376326256.58234
[2024-10-30 22:37:06] 2024-10-31 02:36:50,908 | INFO     | intersect: -527376326256.58234
[2024-10-30 22:37:06] 2024-10-31 02:36:50,908 | INFO     | chi2: 10.567452288359224
[2024-10-30 22:37:06] 2024-10-31 02:36:50,908 | INFO     | -- intersect: -527376326256.58234
[2024-10-30 22:37:06] 2024-10-31 02:36:50,908 | INFO     | current memory leak: 304.78 B/s (using 75 data points, chi2=10.57)
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | ..............................
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | . Timing measurements:
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | . get job = 0 s
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | . initial setup = 2 s
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | . payload setup = 11 s
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | . stage-in = 0 s
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | . payload execution = 4964 s
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | . stage-out = 0 s
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | . log creation = 0 s
[2024-10-30 22:37:06] 2024-10-31 02:36:50,909 | INFO     | ..............................
[2024-10-30 22:37:06] 2024-10-31 02:36:50,991 | INFO     | 
[2024-10-30 22:37:06] 2024-10-31 02:36:50,991 | INFO     | job summary report
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | --------------------------------------------------
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | PanDA job id: 6384342340
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | task id: 41843676
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | errors: (none)
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | pilot state: finished 
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | transexitcode: 0
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | exeerrorcode: 0
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | exeerrordiag: 
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | exitcode: 0
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | exitmsg: OK
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | cpuconsumptiontime: 10739 s
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | nevents: 50
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | neventsw: 0
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | pid: 73159
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | pgrp: 73159
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | corecount: 8
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | event service: False
[2024-10-30 22:37:06] 2024-10-31 02:36:50,992 | INFO     | sizes: {0: 2426899, 1: 2428435, 9: 2428641, 12: 2428669, 4980: 2455803, 4982: 2464823, 4985: 2465007, 4999: 2465229}
[2024-10-30 22:37:06] 2024-10-31 02:36:50,993 | INFO     | --------------------------------------------------
[2024-10-30 22:37:06] 2024-10-31 02:36:50,993 | INFO     | 
[2024-10-30 22:37:06] 2024-10-31 02:36:50,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2024-10-30 22:37:06] 2024-10-31 02:36:51,189 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,189 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,191 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,191 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-30 22:37:06] 2024-10-31 02:36:51,191 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,191 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-30 22:37:06] 2024-10-31 02:36:51,191 | INFO     | job 6384342340 has completed (purged errors)
[2024-10-30 22:37:06] 2024-10-31 02:36:51,191 | INFO     | overall cleanup function is called
[2024-10-30 22:37:06] 2024-10-31 02:36:52,202 | INFO     | --- collectZombieJob: --- 10, [73159]
[2024-10-30 22:37:06] 2024-10-31 02:36:52,203 | INFO     | zombie collector waiting for pid 73159
[2024-10-30 22:37:06] 2024-10-31 02:36:52,203 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-30 22:37:06] 2024-10-31 02:36:52,203 | INFO     | collected zombie processes
[2024-10-30 22:37:06] 2024-10-31 02:36:52,203 | INFO     | will attempt to kill all subprocesses of pid=73159
[2024-10-30 22:37:06] 2024-10-31 02:36:52,548 | INFO     | process IDs to be killed: [73159] (in reverse order)
[2024-10-30 22:37:06] 2024-10-31 02:36:52,673 | WARNING  | found no corresponding commands to process id(s)
[2024-10-30 22:37:06] 2024-10-31 02:36:52,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-30 22:37:06] 2024-10-31 02:36:52,684 | INFO     | did not find any defunct processes belonging to 73159
[2024-10-30 22:37:06] 2024-10-31 02:36:52,696 | INFO     | did not find any defunct processes belonging to 73159
[2024-10-30 22:37:06] 2024-10-31 02:36:52,697 | INFO     | ready for new job
[2024-10-30 22:37:06] 2024-10-31 02:36:52,697 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-30 22:37:06] 2024-10-31 02:36:52,698 | INFO     | **************************************
[2024-10-30 22:37:06] 2024-10-31 02:36:52,698 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-30 22:37:06] 2024-10-31 02:36:52,698 | INFO     | **************************************
[2024-10-30 22:37:06] 2024-10-31 02:36:52,699 | INFO     | 
[2024-10-30 22:37:06] 2024-10-31 02:36:52,703 | INFO     | architecture information:
[2024-10-30 22:37:06] 2024-10-31 02:36:52,704 | INFO     | executing command: cat /etc/os-release
[2024-10-30 22:37:06] 2024-10-31 02:36:52,726 | INFO     | cat /etc/os-release:
[2024-10-30 22:37:06] NAME="CentOS Linux"
[2024-10-30 22:37:06] VERSION="7 (Core)"
[2024-10-30 22:37:06] ID="centos"
[2024-10-30 22:37:06] ID_LIKE="rhel fedora"
[2024-10-30 22:37:06] VERSION_ID="7"
[2024-10-30 22:37:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-30 22:37:06] ANSI_COLOR="0;31"
[2024-10-30 22:37:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-30 22:37:06] HOME_URL="https://www.centos.org/"
[2024-10-30 22:37:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-30 22:37:06] 
[2024-10-30 22:37:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-30 22:37:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-30 22:37:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-30 22:37:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-30 22:37:06] 
[2024-10-30 22:37:06] 2024-10-31 02:36:52,727 | INFO     | **************************************
[2024-10-30 22:37:06] 2024-10-31 02:36:53,229 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2024-10-30 22:37:06] 2024-10-31 02:36:53,356 | INFO     | sufficient remaining disk space (102608404480 B)
[2024-10-30 22:37:06] 2024-10-31 02:36:53,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-30 22:37:06] 2024-10-31 02:36:53,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-30 22:37:06] 2024-10-31 02:36:53,374 | INFO     | found 0 job(s) in 20 queues
[2024-10-30 22:37:06] 2024-10-31 02:36:53,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-30 22:37:06] 2024-10-31 02:36:53,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-30 22:37:06] 2024-10-31 02:36:53,448 | INFO     | all payload control threads have been joined
[2024-10-30 22:37:06] 2024-10-31 02:36:53,490 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-30 22:37:06] 2024-10-31 02:36:53,491 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-30 22:37:06] 2024-10-31 02:36:53,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-30 22:37:06] 2024-10-31 02:36:53,491 | INFO     | will abort loop
[2024-10-30 22:37:06] 2024-10-31 02:36:54,196 | INFO     | all data control threads have been joined
[2024-10-30 22:37:06] 2024-10-31 02:36:54,305 | INFO     | all job control threads have been joined
[2024-10-30 22:37:06] 2024-10-31 02:36:54,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-30 22:37:06] 2024-10-31 02:36:54,362 | INFO     | [job] retrieve thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:54,455 | INFO     | [payload] control thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:54,499 | INFO     | [job] job monitor thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:54,763 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:54,933 | INFO     | [payload] validate_pre thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:54,996 | INFO     | [data] copytool_in thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:55,051 | INFO     | [job] validate thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:55,202 | INFO     | [data] control thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:55,251 | INFO     | [payload] execute_payloads thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:55,263 | INFO     | [job] create_data_payload thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:55,311 | INFO     | [job] control thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:55,342 | INFO     | [payload] failed_post thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:55,658 | INFO     | [payload] validate_post thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:56,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-30 22:37:06] 2024-10-31 02:36:56,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-30 22:37:06] 2024-10-31 02:36:56,345 | INFO     | [data] copytool_out thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:36:57,012 | INFO     | [job] queue monitor thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:37:00,253 | INFO     | [data] queue_monitor thread has finished
[2024-10-30 22:37:06] 2024-10-31 02:37:00,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052284589888)>', '<ExcThread(monitor, started 140051551868672)>']
[2024-10-30 22:37:06] 2024-10-31 02:37:01,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-30 22:37:06] 2024-10-31 02:37:01,421 | INFO     | [monitor] control thread has ended
[2024-10-30 22:37:06] 2024-10-31 02:37:05,559 | INFO     | all workflow threads have been joined
[2024-10-30 22:37:06] 2024-10-31 02:37:05,560 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-30 22:37:06] 2024-10-31 02:37:05,560 | INFO     | traces error code: 0
[2024-10-30 22:37:06] 2024-10-31 02:37:05,560 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-30 22:37:06] 2024-10-31 02:37:05,761 [wrapper] ==== pilot stdout END ====
[2024-10-30 22:37:06] 2024-10-31 02:37:05,767 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-30 22:37:06] 2024-10-31 02:37:05,771 [wrapper] pilotpid: 50547
[2024-10-30 22:37:06] 2024-10-31 02:37:05,802 [wrapper] Pilot exit status: 0
[2024-10-30 22:37:06] 2024-10-31 02:37:05,823 [wrapper] pandaids: 6384342340
[2024-10-30 22:37:06] 2024-10-31 02:37:05,940 [wrapper] cleanup supervisor_pilot 42484 50548
[2024-10-30 22:37:06] 2024-10-31 02:37:05,942 [wrapper] Test setup, not cleaning
[2024-10-30 22:37:06] 2024-10-31 02:37:05,945 [wrapper] ==== wrapper stdout END ====
[2024-10-30 22:37:06] 2024-10-31 02:37:05,947 [wrapper] ==== wrapper stderr END ====
[2024-10-30 22:37:06] 2024-10-31 02:37:05,950 [wrapper] apfmon messages muted
[2024-10-30 22:37:06]  *** Error codes and diagnostics ***
[2024-10-30 22:37:06]     "exeErrorCode": 0,
[2024-10-30 22:37:06]     "exeErrorDiag": "",
[2024-10-30 22:37:06]     "pilotErrorCode": 0,
[2024-10-30 22:37:06]     "pilotErrorDiag": "",
[2024-10-30 22:37:06]  *** Listing of results directory ***
[2024-10-30 22:37:06] total 423360
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas    486088 Oct 30 20:35 pilot3.tar.gz
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas      5652 Oct 30 20:39 queuedata.json
[2024-10-30 22:37:06] -rwx------ 1 boincer umatlas     34589 Oct 30 20:39 runpilot2-wrapper.sh
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas       100 Oct 30 21:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-30 22:37:06] -rwxr-xr-x 1 boincer umatlas      7986 Oct 30 21:12 run_atlas
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas       105 Oct 30 21:12 job.xml
[2024-10-30 22:37:06] -rw-r--r-- 2 boincer umatlas 378559321 Oct 30 21:12 EVNT.41780202._000011.pool.root.1
[2024-10-30 22:37:06] -rw-r--r-- 2 boincer umatlas     17569 Oct 30 21:12 start_atlas.sh
[2024-10-30 22:37:06] drwxrwx--x 2 boincer umatlas      4096 Oct 30 21:12 shared
[2024-10-30 22:37:06] -rw-r--r-- 2 boincer umatlas    499918 Oct 30 21:12 input.tar.gz
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas         0 Oct 30 21:12 boinc_lockfile
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas      2888 Oct 30 21:12 pandaJob.out
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas       467 Oct 30 21:12 setup.sh.local
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas   1030026 Oct 30 21:13 agis_schedconf.cvmfs.json
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas   1611897 Oct 30 21:13 agis_ddmendpoints.agis.ALL.json
[2024-10-30 22:37:06] drwx------ 4 boincer umatlas      4096 Oct 30 21:13 pilot3
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas       528 Oct 30 22:21 boinc_task_state.xml
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas      6386 Oct 30 22:36 init_data.xml
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas  47751844 Oct 30 22:36 HITS.41843676._016276.pool.root.1
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas        95 Oct 30 22:36 pilot_heartbeat.json
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas      1073 Oct 30 22:36 memory_monitor_summary.json
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas   1191693 Oct 30 22:36 log.41843676._016276.job.log.tgz.1
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas      8559 Oct 30 22:36 heartbeat.json
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas      8192 Oct 30 22:36 boinc_mmap_file
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas        26 Oct 30 22:36 wrapper_checkpoint.txt
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas      4402 Oct 30 22:37 pilotlog.txt
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas    477008 Oct 30 22:37 log.41843676._016276.job.log.1
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas       353 Oct 30 22:37 output.list
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas       620 Oct 30 22:37 runtime_log
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas   1689600 Oct 30 22:37 result.tar.gz
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas       658 Oct 30 22:37 ZpSMDmeOYQ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmjfLMDmbvU4Gm.diag
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas     11413 Oct 30 22:37 runtime_log.err
[2024-10-30 22:37:06] -rw-r--r-- 1 boincer umatlas     21853 Oct 30 22:37 stderr.txt
[2024-10-30 22:37:06] HITS file was successfully produced:
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas 47751844 Oct 30 22:36 shared/HITS.pool.root.1
[2024-10-30 22:37:06]  *** Contents of shared directory: ***
[2024-10-30 22:37:06] total 418488
[2024-10-30 22:37:06] -rw-r--r-- 2 boincer umatlas 378559321 Oct 30 21:12 ATLAS.root_0
[2024-10-30 22:37:06] -rw-r--r-- 2 boincer umatlas     17569 Oct 30 21:12 start_atlas.sh
[2024-10-30 22:37:06] -rw-r--r-- 2 boincer umatlas    499918 Oct 30 21:12 input.tar.gz
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas  47751844 Oct 30 22:36 HITS.pool.root.1
[2024-10-30 22:37:06] -rw------- 1 boincer umatlas   1689600 Oct 30 22:37 result.tar.gz
22:37:07 (40684): run_atlas exited; CPU time 10333.515911
22:37:07 (40684): called boinc_finish(0)

</stderr_txt>
]]>

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