Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:09:28 (49340): wrapper (7.7.26015): starting
21:09:28 (49340): wrapper: running run_atlas (--nthreads 8)
[2024-10-30 21:09:28] Arguments: --nthreads 8
[2024-10-30 21:09:28] Threads: 8
[2024-10-30 21:09:28] Checking for CVMFS
[2024-10-30 21:09:29] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-30 21:09:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-30 21:09:29] Running cvmfs_config stat atlas.cern.ch
[2024-10-30 21:09:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-30 21:09:30] 2.11.2.0 4935 1417 168424 138922 3 474 14449759 18432000 19432 130560 0 11679858 98.551 41565604 66248 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-10-30 21:09:30] CVMFS is ok
[2024-10-30 21:09:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-30 21:09:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-30 21:09:30] Further information can be found at the LHC@home message board.
[2024-10-30 21:09:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-30 21:09:30] Checking for apptainer binary...
[2024-10-30 21:09:30] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-30 21:09:30] Running /usr/bin/apptainer --version
[2024-10-30 21:09:30] apptainer version 1.3.2-1.el7
[2024-10-30 21:09:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-30 21:09:32] c-212-11.aglt2.org
[2024-10-30 21:09:32] apptainer works
[2024-10-30 21:09:32] Set ATHENA_PROC_NUMBER=8
[2024-10-30 21:09:32] Set ATHENA_CORE_NUMBER=8
[2024-10-30 21:09:32] Starting ATLAS job with PandaID=6384320200
[2024-10-30 21:09:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-31 01:00:42]  *** The last 200 lines of the pilot log: ***
[2024-10-31 01:00:42] 2024-10-31 05:00:02,169 | INFO     | monitor loop #934: job 0:6384320200 is in state 'finished'
[2024-10-31 01:00:42] 2024-10-31 05:00:02,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:00:42] 2024-10-31 05:00:04,674 | INFO     | monitor loop #935: job 0:6384320200 is in state 'finished'
[2024-10-31 01:00:42] 2024-10-31 05:00:04,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:00:42] 2024-10-31 05:00:07,179 | INFO     | monitor loop #936: job 0:6384320200 is in state 'finished'
[2024-10-31 01:00:42] 2024-10-31 05:00:07,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:00:42] 2024-10-31 05:00:09,684 | INFO     | monitor loop #937: job 0:6384320200 is in state 'finished'
[2024-10-31 01:00:42] 2024-10-31 05:00:09,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:00:42] 2024-10-31 05:00:12,189 | INFO     | monitor loop #938: job 0:6384320200 is in state 'finished'
[2024-10-31 01:00:42] 2024-10-31 05:00:12,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:00:42] 2024-10-31 05:00:14,696 | INFO     | monitor loop #939: job 0:6384320200 is in state 'finished'
[2024-10-31 01:00:42] 2024-10-31 05:00:14,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:00:42] 2024-10-31 05:00:17,199 | INFO     | monitor loop #940: job 0:6384320200 is in state 'finished'
[2024-10-31 01:00:42] 2024-10-31 05:00:17,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:00:42] 2024-10-31 05:00:17,637 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-31 01:00:42] 2024-10-31 05:00:17,637 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6384320200/memory_monitor_summary.json (trf name=prmon)
[2024-10-31 01:00:42] 2024-10-31 05:00:17,638 | INFO     | extracted standard info from prmon json
[2024-10-31 01:00:42] 2024-10-31 05:00:17,638 | INFO     | extracted standard memory fields from prmon json
[2024-10-31 01:00:42] 2024-10-31 05:00:17,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-31 01:00:42] 2024-10-31 05:00:17,642 | INFO     | fitting pss+swap vs Time
[2024-10-31 01:00:42] 2024-10-31 05:00:17,642 | INFO     | model: linear, x: [1730337149.0, 1730337210.0, 1730337271.0, 1730337332.0, 1730337393.0, 1730337454.0, 1730337515.0, 1730337576.0, 1730337637.0, 1730337698.0, 1730
[2024-10-31 01:00:42] 2024-10-31 05:00:17,642 | INFO     | sum of square deviations: 3485549208.245543
[2024-10-31 01:00:42] 2024-10-31 05:00:17,644 | INFO     | sum of deviations: 210322422729.7814
[2024-10-31 01:00:42] 2024-10-31 05:00:17,644 | INFO     | mean x: 1730343951.3705356
[2024-10-31 01:00:42] 2024-10-31 05:00:17,644 | INFO     | mean y: 2146991.90625
[2024-10-31 01:00:42] 2024-10-31 05:00:17,644 | INFO     | -- intersect: -104408983152.84903
[2024-10-31 01:00:42] 2024-10-31 05:00:17,644 | INFO     | intersect: -104408983152.84903
[2024-10-31 01:00:42] 2024-10-31 05:00:17,644 | INFO     | chi2: 28.683272727772728
[2024-10-31 01:00:42] 2024-10-31 05:00:17,644 | INFO     | model: linear, x: [1730337149.0, 1730337210.0, 1730337271.0, 1730337332.0, 1730337393.0, 1730337454.0, 1730337515.0, 1730337576.0, 1730337637.0, 1730337698.0, 1730
[2024-10-31 01:00:42] 2024-10-31 05:00:17,645 | INFO     | sum of square deviations: 3257399749.36987
[2024-10-31 01:00:42] 2024-10-31 05:00:17,646 | INFO     | sum of deviations: 265814057495.83554
[2024-10-31 01:00:42] 2024-10-31 05:00:17,646 | INFO     | mean x: 1730343798.890411
[2024-10-31 01:00:42] 2024-10-31 05:00:17,646 | INFO     | mean y: 2184050.1598173515
[2024-10-31 01:00:42] 2024-10-31 05:00:17,646 | INFO     | -- intersect: -141199308377.9014
[2024-10-31 01:00:42] 2024-10-31 05:00:17,646 | INFO     | intersect: -141199308377.9014
[2024-10-31 01:00:42] 2024-10-31 05:00:17,646 | INFO     | chi2: 24.14840357437458
[2024-10-31 01:00:42] 2024-10-31 05:00:17,646 | INFO     | current chi2=24.14840357437458 (change=15.810152476105829 %)
[2024-10-31 01:00:42] 2024-10-31 05:00:17,647 | INFO     | right removable region: 218
[2024-10-31 01:00:42] 2024-10-31 05:00:17,647 | INFO     | model: linear, x: [1730337454.0, 1730337515.0, 1730337576.0, 1730337637.0, 1730337698.0, 1730337759.0, 1730337820.0, 1730337881.0, 1730337942.0, 1730338003.0, 1730
[2024-10-31 01:00:42] 2024-10-31 05:00:17,647 | INFO     | sum of square deviations: 3257280799.36987
[2024-10-31 01:00:42] 2024-10-31 05:00:17,648 | INFO     | sum of deviations: 146878161415.5342
[2024-10-31 01:00:42] 2024-10-31 05:00:17,648 | INFO     | mean x: 1730344103.890411
[2024-10-31 01:00:42] 2024-10-31 05:00:17,648 | INFO     | mean y: 2189364.7305936073
[2024-10-31 01:00:42] 2024-10-31 05:00:17,648 | INFO     | -- intersect: -78022941488.2188
[2024-10-31 01:00:42] 2024-10-31 05:00:17,648 | INFO     | intersect: -78022941488.2188
[2024-10-31 01:00:42] 2024-10-31 05:00:17,649 | INFO     | chi2: 24.508611404940112
[2024-10-31 01:00:42] 2024-10-31 05:00:17,649 | INFO     | current chi2=24.508611404940112 (change=14.55434100025301 %)
[2024-10-31 01:00:42] 2024-10-31 05:00:17,649 | INFO     | left removable region: 10
[2024-10-31 01:00:42] 2024-10-31 05:00:17,649 | INFO     | model: linear, x: [1730337759.0, 1730337820.0, 1730337881.0, 1730337942.0, 1730338003.0, 1730338064.0, 1730338125.0, 1730338186.0, 1730338247.0, 1730338308.0, 1730
[2024-10-31 01:00:42] 2024-10-31 05:00:17,649 | INFO     | sum of square deviations: 2790761147.1875
[2024-10-31 01:00:42] 2024-10-31 05:00:17,650 | INFO     | sum of deviations: 163662598794.75
[2024-10-31 01:00:42] 2024-10-31 05:00:17,650 | INFO     | mean x: 1730344073.4375
[2024-10-31 01:00:42] 2024-10-31 05:00:17,650 | INFO     | mean y: 2273384.2115384615
[2024-10-31 01:00:42] 2024-10-31 05:00:17,651 | INFO     | -- intersect: -101472769778.57349
[2024-10-31 01:00:42] 2024-10-31 05:00:17,651 | INFO     | intersect: -101472769778.57349
[2024-10-31 01:00:42] 2024-10-31 05:00:17,651 | INFO     | chi2: 16.975837840002683
[2024-10-31 01:00:42] 2024-10-31 05:00:17,651 | INFO     | -- intersect: -101472769778.57349
[2024-10-31 01:00:42] 2024-10-31 05:00:17,651 | INFO     | current memory leak: 58.64 B/s (using 208 data points, chi2=16.98)
[2024-10-31 01:00:42] 2024-10-31 05:00:17,651 | INFO     | ..............................
[2024-10-31 01:00:42] 2024-10-31 05:00:17,652 | INFO     | . Timing measurements:
[2024-10-31 01:00:42] 2024-10-31 05:00:17,652 | INFO     | . get job = 0 s
[2024-10-31 01:00:42] 2024-10-31 05:00:17,652 | INFO     | . initial setup = 3 s
[2024-10-31 01:00:42] 2024-10-31 05:00:17,652 | INFO     | . payload setup = 33 s
[2024-10-31 01:00:42] 2024-10-31 05:00:17,652 | INFO     | . stage-in = 0 s
[2024-10-31 01:00:42] 2024-10-31 05:00:17,652 | INFO     | . payload execution = 13662 s
[2024-10-31 01:00:42] 2024-10-31 05:00:17,652 | INFO     | . stage-out = 4 s
[2024-10-31 01:00:42] 2024-10-31 05:00:17,652 | INFO     | . log creation = 0 s
[2024-10-31 01:00:42] 2024-10-31 05:00:17,652 | INFO     | ..............................
[2024-10-31 01:00:42] 2024-10-31 05:00:17,730 | INFO     | 
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | job summary report
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | --------------------------------------------------
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | PanDA job id: 6384320200
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | task id: 41843733
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | errors: (none)
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | pilot state: finished 
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | transexitcode: 0
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | exeerrorcode: 0
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | exeerrordiag: 
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | exitcode: 0
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | exitmsg: OK
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | cpuconsumptiontime: 22899 s
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | nevents: 100
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | neventsw: 0
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | pid: 24218
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | pgrp: 24218
[2024-10-31 01:00:42] 2024-10-31 05:00:17,731 | INFO     | corecount: 8
[2024-10-31 01:00:42] 2024-10-31 05:00:17,732 | INFO     | event service: False
[2024-10-31 01:00:42] 2024-10-31 05:00:17,732 | INFO     | sizes: {0: 2428132, 1: 2428387, 12: 2428387, 23: 2428621, 33: 2428649, 13700: 2459677, 13706: 2468753, 13744: 2468919}
[2024-10-31 01:00:42] 2024-10-31 05:00:17,732 | INFO     | --------------------------------------------------
[2024-10-31 01:00:42] 2024-10-31 05:00:17,732 | INFO     | 
[2024-10-31 01:00:42] 2024-10-31 05:00:17,732 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-10-31 01:00:42] 2024-10-31 05:00:17,916 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,916 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,916 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,918 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-31 01:00:42] 2024-10-31 05:00:17,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,918 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-31 01:00:42] 2024-10-31 05:00:17,918 | INFO     | job 6384320200 has completed (purged errors)
[2024-10-31 01:00:42] 2024-10-31 05:00:17,918 | INFO     | overall cleanup function is called
[2024-10-31 01:00:42] 2024-10-31 05:00:18,939 | INFO     | --- collectZombieJob: --- 10, [24218]
[2024-10-31 01:00:42] 2024-10-31 05:00:18,939 | INFO     | zombie collector waiting for pid 24218
[2024-10-31 01:00:42] 2024-10-31 05:00:18,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-31 01:00:42] 2024-10-31 05:00:18,939 | INFO     | collected zombie processes
[2024-10-31 01:00:42] 2024-10-31 05:00:18,939 | INFO     | will attempt to kill all subprocesses of pid=24218
[2024-10-31 01:00:42] 2024-10-31 05:00:19,290 | INFO     | process IDs to be killed: [24218] (in reverse order)
[2024-10-31 01:00:42] 2024-10-31 05:00:19,774 | WARNING  | found no corresponding commands to process id(s)
[2024-10-31 01:00:42] 2024-10-31 05:00:19,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-31 01:00:42] 2024-10-31 05:00:19,786 | INFO     | did not find any defunct processes belonging to 24218
[2024-10-31 01:00:42] 2024-10-31 05:00:19,796 | INFO     | did not find any defunct processes belonging to 24218
[2024-10-31 01:00:42] 2024-10-31 05:00:19,797 | INFO     | ready for new job
[2024-10-31 01:00:42] 2024-10-31 05:00:19,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-31 01:00:42] 2024-10-31 05:00:19,798 | INFO     | **************************************
[2024-10-31 01:00:42] 2024-10-31 05:00:19,798 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-31 01:00:42] 2024-10-31 05:00:19,798 | INFO     | **************************************
[2024-10-31 01:00:42] 2024-10-31 05:00:19,798 | INFO     | 
[2024-10-31 01:00:42] 2024-10-31 05:00:19,802 | INFO     | architecture information:
[2024-10-31 01:00:42] 2024-10-31 05:00:19,810 | INFO     | executing command: cat /etc/os-release
[2024-10-31 01:00:42] 2024-10-31 05:00:19,928 | INFO     | cat /etc/os-release:
[2024-10-31 01:00:42] NAME="CentOS Linux"
[2024-10-31 01:00:42] VERSION="7 (Core)"
[2024-10-31 01:00:42] ID="centos"
[2024-10-31 01:00:42] ID_LIKE="rhel fedora"
[2024-10-31 01:00:42] VERSION_ID="7"
[2024-10-31 01:00:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-31 01:00:42] ANSI_COLOR="0;31"
[2024-10-31 01:00:42] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-31 01:00:42] HOME_URL="https://www.centos.org/"
[2024-10-31 01:00:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-31 01:00:42] 
[2024-10-31 01:00:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-31 01:00:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-31 01:00:42] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-31 01:00:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-31 01:00:42] 
[2024-10-31 01:00:42] 2024-10-31 05:00:19,928 | INFO     | **************************************
[2024-10-31 01:00:42] 2024-10-31 05:00:20,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-10-31 01:00:42] 2024-10-31 05:00:20,534 | INFO     | sufficient remaining disk space (102308511744 B)
[2024-10-31 01:00:42] 2024-10-31 05:00:20,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-31 01:00:42] 2024-10-31 05:00:20,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-31 01:00:42] 2024-10-31 05:00:20,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-31 01:00:42] 2024-10-31 05:00:20,541 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-31 01:00:42] 2024-10-31 05:00:20,552 | INFO     | found 0 job(s) in 20 queues
[2024-10-31 01:00:42] 2024-10-31 05:00:20,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-31 01:00:42] 2024-10-31 05:00:20,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-31 01:00:42] 2024-10-31 05:00:20,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-31 01:00:42] 2024-10-31 05:00:20,714 | INFO     | aborting loop
[2024-10-31 01:00:42] 2024-10-31 05:00:21,115 | INFO     | all payload control threads have been joined
[2024-10-31 01:00:42] 2024-10-31 05:00:21,227 | INFO     | all job control threads have been joined
[2024-10-31 01:00:42] 2024-10-31 05:00:21,542 | INFO     | [job] retrieve thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:21,561 | INFO     | [job] create_data_payload thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:21,565 | INFO     | [payload] validate_pre thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:21,578 | INFO     | all data control threads have been joined
[2024-10-31 01:00:42] 2024-10-31 05:00:21,719 | INFO     | [job] job monitor thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:21,802 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-31 01:00:42] 2024-10-31 05:00:22,121 | INFO     | [payload] control thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:22,183 | INFO     | [data] copytool_in thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:22,233 | INFO     | [job] control thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:22,513 | INFO     | [payload] failed_post thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:22,545 | INFO     | [data] copytool_out thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:22,584 | INFO     | [data] control thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:22,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-31 01:00:42] 2024-10-31 05:00:22,750 | INFO     | [job] validate thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:22,809 | INFO     | [payload] execute_payloads thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:23,036 | INFO     | [payload] validate_post thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:23,749 | INFO     | [job] queue monitor thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:25,813 | INFO     | [data] queue_monitor thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:31,533 | INFO     | job.realtimelogging is not enabled
[2024-10-31 01:00:42] 2024-10-31 05:00:32,539 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-31 01:00:42] 2024-10-31 05:00:34,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135303911232)>', '<ExcThread(monitor, started 140135001724672)>']
[2024-10-31 01:00:42] 2024-10-31 05:00:34,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-31 01:00:42] 2024-10-31 05:00:34,632 | INFO     | [monitor] control thread has ended
[2024-10-31 01:00:42] 2024-10-31 05:00:39,609 | INFO     | all workflow threads have been joined
[2024-10-31 01:00:42] 2024-10-31 05:00:39,609 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-31 01:00:42] 2024-10-31 05:00:39,610 | INFO     | traces error code: 0
[2024-10-31 01:00:42] 2024-10-31 05:00:39,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-31 01:00:42] 2024-10-31 05:00:40,018 [wrapper] ==== pilot stdout END ====
[2024-10-31 01:00:42] 2024-10-31 05:00:40,044 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-31 01:00:42] 2024-10-31 05:00:40,072 [wrapper] pilotpid: 80924
[2024-10-31 01:00:42] 2024-10-31 05:00:40,090 [wrapper] Pilot exit status: 0
[2024-10-31 01:00:42] 2024-10-31 05:00:40,160 [wrapper] pandaids: 6384320200
[2024-10-31 01:00:42] 2024-10-31 05:00:40,419 [wrapper] cleanup supervisor_pilot 35193 80925
[2024-10-31 01:00:42] 2024-10-31 05:00:40,472 [wrapper] Test setup, not cleaning
[2024-10-31 01:00:42] 2024-10-31 05:00:40,530 [wrapper] ==== wrapper stdout END ====
[2024-10-31 01:00:42] 2024-10-31 05:00:40,589 [wrapper] ==== wrapper stderr END ====
[2024-10-31 01:00:42] 2024-10-31 05:00:40,678 [wrapper] apfmon messages muted
[2024-10-31 01:00:42]  *** Error codes and diagnostics ***
[2024-10-31 01:00:42]     "exeErrorCode": 0,
[2024-10-31 01:00:42]     "exeErrorDiag": "",
[2024-10-31 01:00:42]     "pilotErrorCode": 0,
[2024-10-31 01:00:42]     "pilotErrorDiag": "",
[2024-10-31 01:00:42]  *** Listing of results directory ***
[2024-10-31 01:00:42] total 447260
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas      5652 Oct 30 20:34 queuedata.json
[2024-10-31 01:00:42] -rwx------ 1 boincer umatlas     34589 Oct 30 20:35 runpilot2-wrapper.sh
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas    486088 Oct 30 20:35 pilot3.tar.gz
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas       100 Oct 30 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-31 01:00:42] -rwxr-xr-x 1 boincer umatlas      7986 Oct 30 21:09 run_atlas
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas       105 Oct 30 21:09 job.xml
[2024-10-31 01:00:42] -rw-r--r-- 2 boincer umatlas 356899408 Oct 30 21:09 EVNT.41780318._000002.pool.root.1
[2024-10-31 01:00:42] -rw-r--r-- 2 boincer umatlas     17569 Oct 30 21:09 start_atlas.sh
[2024-10-31 01:00:42] drwxrwx--x 2 boincer umatlas      4096 Oct 30 21:09 shared
[2024-10-31 01:00:42] -rw-r--r-- 2 boincer umatlas    499911 Oct 30 21:09 input.tar.gz
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas         0 Oct 30 21:09 boinc_lockfile
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas      2854 Oct 30 21:09 pandaJob.out
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas       467 Oct 30 21:09 setup.sh.local
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas   1030026 Oct 30 21:10 agis_schedconf.cvmfs.json
[2024-10-31 01:00:42] drwx------ 4 boincer umatlas      4096 Oct 30 21:10 pilot3
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas       531 Oct 31 00:28 boinc_task_state.xml
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas      6389 Oct 31 00:55 init_data.xml
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas  92241210 Oct 31 00:59 HITS.41843733._000171.pool.root.1
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas        95 Oct 31 00:59 pilot_heartbeat.json
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas      1080 Oct 31 00:59 memory_monitor_summary.json
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas   1611897 Oct 31 00:59 agis_ddmendpoints.agis.ALL.json
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas   1289349 Oct 31 00:59 log.41843733._000171.job.log.tgz.1
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas      8570 Oct 31 01:00 heartbeat.json
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas      4411 Oct 31 01:00 pilotlog.txt
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas   1199877 Oct 31 01:00 log.41843733._000171.job.log.1
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas      8192 Oct 31 01:00 boinc_mmap_file
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas       353 Oct 31 01:00 output.list
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas       620 Oct 31 01:00 runtime_log
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas   2508800 Oct 31 01:00 result.tar.gz
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas        28 Oct 31 01:00 wrapper_checkpoint.txt
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas     11419 Oct 31 01:00 runtime_log.err
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas       662 Oct 31 01:00 6UgKDmjKYQ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmSdLMDmHtjQVn.diag
[2024-10-31 01:00:42] -rw-r--r-- 1 boincer umatlas     21889 Oct 31 01:00 stderr.txt
[2024-10-31 01:00:42] HITS file was successfully produced:
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas 92241210 Oct 31 00:59 shared/HITS.pool.root.1
[2024-10-31 01:00:42]  *** Contents of shared directory: ***
[2024-10-31 01:00:42] total 441588
[2024-10-31 01:00:42] -rw-r--r-- 2 boincer umatlas 356899408 Oct 30 21:09 ATLAS.root_0
[2024-10-31 01:00:42] -rw-r--r-- 2 boincer umatlas     17569 Oct 30 21:09 start_atlas.sh
[2024-10-31 01:00:42] -rw-r--r-- 2 boincer umatlas    499911 Oct 30 21:09 input.tar.gz
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas  92241210 Oct 31 00:59 HITS.pool.root.1
[2024-10-31 01:00:42] -rw------- 1 boincer umatlas   2508800 Oct 31 01:00 result.tar.gz
01:00:43 (49340): run_atlas exited; CPU time 22030.142501
01:00:43 (49340): called boinc_finish(0)

</stderr_txt>
]]>

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