Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:36:54 (242666): wrapper (7.7.26015): starting
20:36:54 (242666): wrapper: running run_atlas (--nthreads 8)
[2024-10-30 20:36:55] Arguments: --nthreads 8
[2024-10-30 20:36:55] Threads: 8
[2024-10-30 20:36:55] Checking for CVMFS
[2024-10-30 20:36:55] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-30 20:36:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-30 20:36:55] Running cvmfs_config stat atlas.cern.ch
[2024-10-30 20:36:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-30 20:36:55] 2.11.2.0 294477 728 196500 138922 2 142 17110468 18432001 26841 130560 0 6180229 99.862 3159812 32258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-10-30 20:36:55] CVMFS is ok
[2024-10-30 20:36:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-30 20:36:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-30 20:36:55] Further information can be found at the LHC@home message board.
[2024-10-30 20:36:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-30 20:36:55] Checking for apptainer binary...
[2024-10-30 20:36:55] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-30 20:36:55] Running /usr/bin/apptainer --version
[2024-10-30 20:36:55] apptainer version 1.3.2-1.el7
[2024-10-30 20:36:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-30 20:36:56] c-211-35-1.aglt2.org
[2024-10-30 20:36:56] apptainer works
[2024-10-30 20:36:56] Set ATHENA_PROC_NUMBER=8
[2024-10-30 20:36:56] Set ATHENA_CORE_NUMBER=8
[2024-10-30 20:36:56] Starting ATLAS job with PandaID=6384305187
[2024-10-30 20:36:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-31 01:37:51]  *** The last 200 lines of the pilot log: ***
[2024-10-31 01:37:51] 2024-10-31 05:37:19,324 | INFO     | monitor loop #1054: job 0:6384305187 is in state 'finished'
[2024-10-31 01:37:51] 2024-10-31 05:37:19,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:37:51] 2024-10-31 05:37:21,828 | INFO     | monitor loop #1055: job 0:6384305187 is in state 'finished'
[2024-10-31 01:37:51] 2024-10-31 05:37:21,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:37:51] 2024-10-31 05:37:24,334 | INFO     | monitor loop #1056: job 0:6384305187 is in state 'finished'
[2024-10-31 01:37:51] 2024-10-31 05:37:24,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:37:51] 2024-10-31 05:37:26,839 | INFO     | monitor loop #1057: job 0:6384305187 is in state 'finished'
[2024-10-31 01:37:51] 2024-10-31 05:37:26,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:37:51] 2024-10-31 05:37:27,341 | INFO     | 18013s have passed since pilot start
[2024-10-31 01:37:51] 2024-10-31 05:37:29,344 | INFO     | monitor loop #1058: job 0:6384305187 is in state 'finished'
[2024-10-31 01:37:51] 2024-10-31 05:37:29,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:37:51] 2024-10-31 05:37:31,849 | INFO     | monitor loop #1059: job 0:6384305187 is in state 'finished'
[2024-10-31 01:37:51] 2024-10-31 05:37:31,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-31 01:37:51] 2024-10-31 05:37:33,763 | INFO     | CPU arch script returned: x86-64-v4
[2024-10-31 01:37:51] 2024-10-31 05:37:33,763 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6384305187/memory_monitor_summary.json (trf name=prmon)
[2024-10-31 01:37:51] 2024-10-31 05:37:33,764 | INFO     | extracted standard info from prmon json
[2024-10-31 01:37:51] 2024-10-31 05:37:33,764 | INFO     | extracted standard memory fields from prmon json
[2024-10-31 01:37:51] 2024-10-31 05:37:33,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-31 01:37:51] 2024-10-31 05:37:33,770 | INFO     | fitting pss+swap vs Time
[2024-10-31 01:37:51] 2024-10-31 05:37:33,771 | INFO     | model: linear, x: [1730335089.0, 1730335150.0, 1730335211.0, 1730335272.0, 1730335333.0, 1730335394.0, 1730335455.0, 1730335516.0, 1730335577.0, 1730335638.0, 1730
[2024-10-31 01:37:51] 2024-10-31 05:37:33,771 | INFO     | sum of square deviations: 7879886582.996569
[2024-10-31 01:37:51] 2024-10-31 05:37:33,774 | INFO     | sum of deviations: 77388959469.20728
[2024-10-31 01:37:51] 2024-10-31 05:37:33,774 | INFO     | mean x: 1730344028.9965987
[2024-10-31 01:37:51] 2024-10-31 05:37:33,774 | INFO     | mean y: 2162108.207482993
[2024-10-31 01:37:51] 2024-10-31 05:37:33,774 | INFO     | -- intersect: -16991676891.551243
[2024-10-31 01:37:51] 2024-10-31 05:37:33,774 | INFO     | intersect: -16991676891.551243
[2024-10-31 01:37:51] 2024-10-31 05:37:33,774 | INFO     | chi2: 36.837004961536756
[2024-10-31 01:37:51] 2024-10-31 05:37:33,775 | INFO     | model: linear, x: [1730335089.0, 1730335150.0, 1730335211.0, 1730335272.0, 1730335333.0, 1730335394.0, 1730335455.0, 1730335516.0, 1730335577.0, 1730335638.0, 1730
[2024-10-31 01:37:51] 2024-10-31 05:37:33,775 | INFO     | sum of square deviations: 7484964743.307918
[2024-10-31 01:37:51] 2024-10-31 05:37:33,777 | INFO     | sum of deviations: 146513635104.58487
[2024-10-31 01:37:51] 2024-10-31 05:37:33,777 | INFO     | mean x: 1730343876.5570934
[2024-10-31 01:37:51] 2024-10-31 05:37:33,778 | INFO     | mean y: 2188803.9342560554
[2024-10-31 01:37:51] 2024-10-31 05:37:33,778 | INFO     | -- intersect: -33868240787.868767
[2024-10-31 01:37:51] 2024-10-31 05:37:33,778 | INFO     | intersect: -33868240787.868767
[2024-10-31 01:37:51] 2024-10-31 05:37:33,778 | INFO     | chi2: 32.789715813665154
[2024-10-31 01:37:51] 2024-10-31 05:37:33,778 | INFO     | current chi2=32.789715813665154 (change=10.98702012310058 %)
[2024-10-31 01:37:51] 2024-10-31 05:37:33,778 | INFO     | right removable region: 288
[2024-10-31 01:37:51] 2024-10-31 05:37:33,779 | INFO     | model: linear, x: [1730335394.0, 1730335455.0, 1730335516.0, 1730335577.0, 1730335638.0, 1730335699.0, 1730335760.0, 1730335821.0, 1730335882.0, 1730335943.0, 1730
[2024-10-31 01:37:51] 2024-10-31 05:37:33,779 | INFO     | sum of square deviations: 7484337663.307915
[2024-10-31 01:37:51] 2024-10-31 05:37:33,781 | INFO     | sum of deviations: 1906754502.546894
[2024-10-31 01:37:51] 2024-10-31 05:37:33,781 | INFO     | mean x: 1730344181.5570934
[2024-10-31 01:37:51] 2024-10-31 05:37:33,781 | INFO     | mean y: 2191194.269896194
[2024-10-31 01:37:51] 2024-10-31 05:37:33,781 | INFO     | -- intersect: -438641609.85582924
[2024-10-31 01:37:51] 2024-10-31 05:37:33,781 | INFO     | intersect: -438641609.85582924
[2024-10-31 01:37:51] 2024-10-31 05:37:33,782 | INFO     | chi2: 33.38052082660184
[2024-10-31 01:37:51] 2024-10-31 05:37:33,782 | INFO     | current chi2=33.38052082660184 (change=9.383184486751828 %)
[2024-10-31 01:37:51] 2024-10-31 05:37:33,782 | INFO     | left removable region: 10
[2024-10-31 01:37:51] 2024-10-31 05:37:33,782 | INFO     | model: linear, x: [1730335699.0, 1730335760.0, 1730335821.0, 1730335882.0, 1730335943.0, 1730336004.0, 1730336065.0, 1730336126.0, 1730336187.0, 1730336248.0, 1730
[2024-10-31 01:37:51] 2024-10-31 05:37:33,782 | INFO     | sum of square deviations: 6661871316.118697
[2024-10-31 01:37:51] 2024-10-31 05:37:33,784 | INFO     | sum of deviations: 24898914472.136612
[2024-10-31 01:37:51] 2024-10-31 05:37:33,785 | INFO     | mean x: 1730344151.1978416
[2024-10-31 01:37:51] 2024-10-31 05:37:33,785 | INFO     | mean y: 2250914.5611510794
[2024-10-31 01:37:51] 2024-10-31 05:37:33,785 | INFO     | -- intersect: -6464954617.283025
[2024-10-31 01:37:51] 2024-10-31 05:37:33,785 | INFO     | intersect: -6464954617.283025
[2024-10-31 01:37:51] 2024-10-31 05:37:33,785 | INFO     | chi2: 26.278311469403693
[2024-10-31 01:37:51] 2024-10-31 05:37:33,785 | INFO     | -- intersect: -6464954617.283025
[2024-10-31 01:37:51] 2024-10-31 05:37:33,786 | INFO     | current memory leak: 3.74 B/s (using 278 data points, chi2=26.28)
[2024-10-31 01:37:51] 2024-10-31 05:37:33,786 | INFO     | ..............................
[2024-10-31 01:37:51] 2024-10-31 05:37:33,786 | INFO     | . Timing measurements:
[2024-10-31 01:37:51] 2024-10-31 05:37:33,786 | INFO     | . get job = 0 s
[2024-10-31 01:37:51] 2024-10-31 05:37:33,786 | INFO     | . initial setup = 2 s
[2024-10-31 01:37:51] 2024-10-31 05:37:33,787 | INFO     | . payload setup = 14 s
[2024-10-31 01:37:51] 2024-10-31 05:37:33,787 | INFO     | . stage-in = 0 s
[2024-10-31 01:37:51] 2024-10-31 05:37:33,787 | INFO     | . payload execution = 17946 s
[2024-10-31 01:37:51] 2024-10-31 05:37:33,787 | INFO     | . stage-out = 3 s
[2024-10-31 01:37:51] 2024-10-31 05:37:33,787 | INFO     | . log creation = 1 s
[2024-10-31 01:37:51] 2024-10-31 05:37:33,787 | INFO     | ..............................
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | 
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | job summary report
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | --------------------------------------------------
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | PanDA job id: 6384305187
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | task id: 41843712
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | errors: (none)
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | pilot state: finished 
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | transexitcode: 0
[2024-10-31 01:37:51] 2024-10-31 05:37:33,892 | INFO     | exeerrorcode: 0
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | exeerrordiag: 
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | exitcode: 0
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | exitmsg: OK
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | cpuconsumptiontime: 18321 s
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | nevents: 50
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | neventsw: 0
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | pid: 272448
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | pgrp: 272448
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | corecount: 8
[2024-10-31 01:37:51] 2024-10-31 05:37:33,893 | INFO     | event service: False
[2024-10-31 01:37:51] 2024-10-31 05:37:33,894 | INFO     | sizes: {0: 2428466, 1: 2428466, 11: 2428700, 12: 2428728, 17965: 2461396, 17969: 2470600, 17993: 2470766}
[2024-10-31 01:37:51] 2024-10-31 05:37:33,894 | INFO     | --------------------------------------------------
[2024-10-31 01:37:51] 2024-10-31 05:37:33,894 | INFO     | 
[2024-10-31 01:37:51] 2024-10-31 05:37:33,894 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-10-31 01:37:51] 2024-10-31 05:37:33,951 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,952 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,952 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,952 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-31 01:37:51] 2024-10-31 05:37:33,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,954 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-31 01:37:51] 2024-10-31 05:37:33,954 | INFO     | job 6384305187 has completed (purged errors)
[2024-10-31 01:37:51] 2024-10-31 05:37:33,954 | INFO     | overall cleanup function is called
[2024-10-31 01:37:51] 2024-10-31 05:37:34,966 | INFO     | --- collectZombieJob: --- 10, [272448]
[2024-10-31 01:37:51] 2024-10-31 05:37:34,966 | INFO     | zombie collector waiting for pid 272448
[2024-10-31 01:37:51] 2024-10-31 05:37:34,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-31 01:37:51] 2024-10-31 05:37:34,966 | INFO     | collected zombie processes
[2024-10-31 01:37:51] 2024-10-31 05:37:34,966 | INFO     | will attempt to kill all subprocesses of pid=272448
[2024-10-31 01:37:51] 2024-10-31 05:37:35,407 | INFO     | process IDs to be killed: [272448] (in reverse order)
[2024-10-31 01:37:51] 2024-10-31 05:37:35,938 | WARNING  | found no corresponding commands to process id(s)
[2024-10-31 01:37:51] 2024-10-31 05:37:35,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-31 01:37:51] 2024-10-31 05:37:35,953 | INFO     | did not find any defunct processes belonging to 272448
[2024-10-31 01:37:51] 2024-10-31 05:37:35,966 | INFO     | did not find any defunct processes belonging to 272448
[2024-10-31 01:37:51] 2024-10-31 05:37:35,966 | INFO     | ready for new job
[2024-10-31 01:37:51] 2024-10-31 05:37:35,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-31 01:37:51] 2024-10-31 05:37:35,968 | INFO     | **************************************
[2024-10-31 01:37:51] 2024-10-31 05:37:35,969 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-31 01:37:51] 2024-10-31 05:37:35,969 | INFO     | **************************************
[2024-10-31 01:37:51] 2024-10-31 05:37:35,969 | INFO     | 
[2024-10-31 01:37:51] 2024-10-31 05:37:35,975 | INFO     | architecture information:
[2024-10-31 01:37:51] 2024-10-31 05:37:35,976 | INFO     | executing command: cat /etc/os-release
[2024-10-31 01:37:51] 2024-10-31 05:37:36,100 | INFO     | cat /etc/os-release:
[2024-10-31 01:37:51] NAME="CentOS Linux"
[2024-10-31 01:37:51] VERSION="7 (Core)"
[2024-10-31 01:37:51] ID="centos"
[2024-10-31 01:37:51] ID_LIKE="rhel fedora"
[2024-10-31 01:37:51] VERSION_ID="7"
[2024-10-31 01:37:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-31 01:37:51] ANSI_COLOR="0;31"
[2024-10-31 01:37:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-31 01:37:51] HOME_URL="https://www.centos.org/"
[2024-10-31 01:37:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-31 01:37:51] 
[2024-10-31 01:37:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-31 01:37:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-31 01:37:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-31 01:37:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-31 01:37:51] 
[2024-10-31 01:37:51] 2024-10-31 05:37:36,100 | INFO     | **************************************
[2024-10-31 01:37:51] 2024-10-31 05:37:36,605 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-10-31 01:37:51] 2024-10-31 05:37:36,711 | INFO     | sufficient remaining disk space (100736696320 B)
[2024-10-31 01:37:51] 2024-10-31 05:37:36,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-31 01:37:51] 2024-10-31 05:37:36,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-31 01:37:51] 2024-10-31 05:37:36,713 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-31 01:37:51] 2024-10-31 05:37:36,713 | INFO     | found 0 job(s) in 20 queues
[2024-10-31 01:37:51] 2024-10-31 05:37:36,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-31 01:37:51] 2024-10-31 05:37:36,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-31 01:37:51] 2024-10-31 05:37:36,888 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-31 01:37:51] 2024-10-31 05:37:36,888 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-31 01:37:51] 2024-10-31 05:37:36,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-31 01:37:51] 2024-10-31 05:37:36,888 | INFO     | will abort loop
[2024-10-31 01:37:51] 2024-10-31 05:37:37,056 | INFO     | all payload control threads have been joined
[2024-10-31 01:37:51] 2024-10-31 05:37:37,673 | INFO     | all data control threads have been joined
[2024-10-31 01:37:51] 2024-10-31 05:37:37,718 | INFO     | [job] retrieve thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:37,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-31 01:37:51] 2024-10-31 05:37:37,896 | INFO     | [job] job monitor thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:38,060 | INFO     | [data] copytool_in thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:38,062 | INFO     | [payload] control thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:38,142 | INFO     | [payload] failed_post thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:38,279 | INFO     | [job] validate thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:38,280 | INFO     | [payload] execute_payloads thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:38,303 | INFO     | [job] create_data_payload thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:38,412 | INFO     | all job control threads have been joined
[2024-10-31 01:37:51] 2024-10-31 05:37:38,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-31 01:37:51] 2024-10-31 05:37:38,679 | INFO     | [data] control thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:38,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-31 01:37:51] 2024-10-31 05:37:38,957 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:38,962 | INFO     | [payload] validate_post thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:39,168 | INFO     | [payload] validate_pre thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:39,418 | INFO     | [job] control thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:39,895 | INFO     | [data] copytool_out thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:39,914 | INFO     | [job] queue monitor thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:42,439 | INFO     | [data] queue_monitor thread has finished
[2024-10-31 01:37:51] 2024-10-31 05:37:43,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705906267968)>', '<ExcThread(monitor, started 139705337239296)>']
[2024-10-31 01:37:51] 2024-10-31 05:37:43,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-31 01:37:51] 2024-10-31 05:37:43,757 | INFO     | [monitor] control thread has ended
[2024-10-31 01:37:51] 2024-10-31 05:37:48,090 | INFO     | all workflow threads have been joined
[2024-10-31 01:37:51] 2024-10-31 05:37:48,090 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-31 01:37:51] 2024-10-31 05:37:48,090 | INFO     | traces error code: 0
[2024-10-31 01:37:51] 2024-10-31 05:37:48,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-31 01:37:51] 2024-10-31 05:37:48,691 [wrapper] ==== pilot stdout END ====
[2024-10-31 01:37:51] 2024-10-31 05:37:48,763 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-31 01:37:51] 2024-10-31 05:37:48,827 [wrapper] pilotpid: 251373
[2024-10-31 01:37:51] 2024-10-31 05:37:48,858 [wrapper] Pilot exit status: 0
[2024-10-31 01:37:51] 2024-10-31 05:37:49,006 [wrapper] pandaids: 6384305187
[2024-10-31 01:37:51] 2024-10-31 05:37:49,541 [wrapper] cleanup supervisor_pilot  34511 251374
[2024-10-31 01:37:51] 2024-10-31 05:37:49,584 [wrapper] Test setup, not cleaning
[2024-10-31 01:37:51] 2024-10-31 05:37:49,627 [wrapper] ==== wrapper stdout END ====
[2024-10-31 01:37:51] 2024-10-31 05:37:49,664 [wrapper] ==== wrapper stderr END ====
[2024-10-31 01:37:51] 2024-10-31 05:37:49,734 [wrapper] apfmon messages muted
[2024-10-31 01:37:51]  *** Error codes and diagnostics ***
[2024-10-31 01:37:52]     "exeErrorCode": 0,
[2024-10-31 01:37:52]     "exeErrorDiag": "",
[2024-10-31 01:37:52]     "pilotErrorCode": 0,
[2024-10-31 01:37:52]     "pilotErrorDiag": "",
[2024-10-31 01:37:52]  *** Listing of results directory ***
[2024-10-31 01:37:52] total 443548
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas    486088 Oct 30 19:34 pilot3.tar.gz
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas      5652 Oct 30 20:02 queuedata.json
[2024-10-31 01:37:52] -rwx------ 1 boincer umatlas     34589 Oct 30 20:02 runpilot2-wrapper.sh
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas       100 Oct 30 20:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-31 01:37:52] -rwxr-xr-x 1 boincer umatlas      7986 Oct 30 20:36 run_atlas
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas       105 Oct 30 20:36 job.xml
[2024-10-31 01:37:52] -rw-r--r-- 2 boincer umatlas 389501102 Oct 30 20:36 EVNT.41780282._000019.pool.root.1
[2024-10-31 01:37:52] -rw-r--r-- 2 boincer umatlas     17569 Oct 30 20:36 start_atlas.sh
[2024-10-31 01:37:52] drwxrwx--x 2 boincer umatlas      4096 Oct 30 20:36 shared
[2024-10-31 01:37:52] -rw-r--r-- 2 boincer umatlas    499924 Oct 30 20:36 input.tar.gz
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas         0 Oct 30 20:36 boinc_lockfile
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas      2894 Oct 30 20:36 pandaJob.out
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas       467 Oct 30 20:36 setup.sh.local
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas   1030026 Oct 30 20:37 agis_schedconf.cvmfs.json
[2024-10-31 01:37:52] drwx------ 4 boincer umatlas      4096 Oct 30 20:37 pilot3
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas       531 Oct 31 00:51 boinc_task_state.xml
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas      6385 Oct 31 01:30 init_data.xml
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas  55270493 Oct 31 01:36 HITS.41843712._005463.pool.root.1
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas      1070 Oct 31 01:37 memory_monitor_summary.json
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas   1611897 Oct 31 01:37 agis_ddmendpoints.agis.ALL.json
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas   1318123 Oct 31 01:37 log.41843712._005463.job.log.tgz.1
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas        95 Oct 31 01:37 pilot_heartbeat.json
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas      8615 Oct 31 01:37 heartbeat.json
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas      4525 Oct 31 01:37 pilotlog.txt
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas   1452955 Oct 31 01:37 log.41843712._005463.job.log.1
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas       353 Oct 31 01:37 output.list
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas       620 Oct 31 01:37 runtime_log
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas   2795520 Oct 31 01:37 result.tar.gz
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas     11429 Oct 31 01:37 runtime_log.err
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas       663 Oct 31 01:37 jJHODmRpXQ6n9Rq4apOajLDm4fhM0noT9bVorHsSDmIpULDmaa9MCn.diag
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas      8192 Oct 31 01:37 boinc_mmap_file
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas        28 Oct 31 01:37 wrapper_checkpoint.txt
[2024-10-31 01:37:52] -rw-r--r-- 1 boincer umatlas     21886 Oct 31 01:37 stderr.txt
[2024-10-31 01:37:52] HITS file was successfully produced:
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas 55270493 Oct 31 01:36 shared/HITS.pool.root.1
[2024-10-31 01:37:52]  *** Contents of shared directory: ***
[2024-10-31 01:37:52] total 437600
[2024-10-31 01:37:52] -rw-r--r-- 2 boincer umatlas 389501102 Oct 30 20:36 ATLAS.root_0
[2024-10-31 01:37:52] -rw-r--r-- 2 boincer umatlas     17569 Oct 30 20:36 start_atlas.sh
[2024-10-31 01:37:52] -rw-r--r-- 2 boincer umatlas    499924 Oct 30 20:36 input.tar.gz
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas  55270493 Oct 31 01:36 HITS.pool.root.1
[2024-10-31 01:37:52] -rw------- 1 boincer umatlas   2795520 Oct 31 01:37 result.tar.gz
01:37:53 (242666): run_atlas exited; CPU time 17980.021358
01:37:53 (242666): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN