Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
2024-10-30 23:53:58 (37740): Detected: vboxwrapper 26206
2024-10-30 23:53:58 (37740): Detected: BOINC client v8.0.3
2024-10-30 23:53:59 (37740): Detected: VirtualBox VboxManage Interface (Version: 7.1.0)
2024-10-30 23:53:59 (37740): Successfully copied 'init_data.xml' to the shared directory.
2024-10-30 23:54:00 (37740): Create VM. (boinc_cd3b00c7b6c40774, slot#37)
2024-10-30 23:54:01 (37740): Setting Memory Size for VM. (4400MB)
2024-10-30 23:54:01 (37740): Setting CPU Count for VM. (4)
2024-10-30 23:54:01 (37740): Setting Chipset Options for VM.
2024-10-30 23:54:01 (37740): Setting Graphics Controller Options for VM.
2024-10-30 23:54:02 (37740): Setting Boot Options for VM.
2024-10-30 23:54:02 (37740): Setting Network Configuration for NAT.
2024-10-30 23:54:02 (37740): Enabling VM Network Access.
2024-10-30 23:54:02 (37740): Disabling USB Support for VM.
2024-10-30 23:54:03 (37740): Disabling COM Port Support for VM.
2024-10-30 23:54:03 (37740): Disabling LPT Port Support for VM.
2024-10-30 23:54:03 (37740): Disabling Audio Support for VM.
2024-10-30 23:54:03 (37740): Disabling Clipboard Support for VM.
2024-10-30 23:54:04 (37740): Disabling Drag and Drop Support for VM.
2024-10-30 23:54:04 (37740): Adding storage controller(s) to VM.
2024-10-30 23:54:04 (37740): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-10-30 23:54:05 (37740): Adding VirtualBox Guest Additions to VM.
2024-10-30 23:54:05 (37740): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-10-30 23:54:05 (37740): forwarding host port 49498 to guest port 80
2024-10-30 23:54:06 (37740): Enabling remote desktop for VM.
2024-10-30 23:54:06 (37740): Enabling shared directory for VM.
2024-10-30 23:54:07 (37740): Starting VM using VBoxManage interface. (boinc_cd3b00c7b6c40774, slot#37)
2024-10-30 23:54:14 (37740): Successfully started VM. (PID = '24708')
2024-10-30 23:54:14 (37740): Reporting VM Process ID to BOINC.
2024-10-30 23:54:14 (37740): Guest Log: BIOS: VirtualBox 7.1.0
2024-10-30 23:54:14 (37740): Guest Log: CPUID EDX: 0x178bfbff
2024-10-30 23:54:14 (37740): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-10-30 23:54:14 (37740): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-10-30 23:54:14 (37740): VM state change detected. (old = 'poweredoff', new = 'running')
2024-10-30 23:54:14 (37740): Detected: Web Application Enabled (http://localhost:49498)
2024-10-30 23:54:14 (37740): Detected: Remote Desktop Enabled (localhost:49499)
2024-10-30 23:54:14 (37740): Preference change detected
2024-10-30 23:54:14 (37740): Setting CPU throttle for VM. (100%)
2024-10-30 23:54:14 (37740): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-10-30 23:54:16 (37740): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-10-30 23:54:16 (37740): Guest Log: BIOS: Booting from Hard Disk...
2024-10-30 23:54:19 (37740): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-10-30 23:54:19 (37740): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-10-30 23:54:19 (37740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-10-30 23:54:27 (37740): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-10-30 23:54:27 (37740): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-10-30 23:54:42 (37740): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-10-30 23:54:42 (37740): Guest Log: 00:00:00.000686 main     Log opened 2024-10-30T23:54:41.100889000Z
2024-10-30 23:54:42 (37740): Guest Log: 00:00:00.000996 main     OS Product: Linux
2024-10-30 23:54:42 (37740): Guest Log: 00:00:00.001044 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-10-30 23:54:42 (37740): Guest Log: 00:00:00.001077 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-10-30 23:54:42 (37740): Guest Log: 00:00:00.001103 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-10-30 23:54:42 (37740): Guest Log: 00:00:00.001103 main     Process ID: 1314
2024-10-30 23:54:42 (37740): Guest Log: 00:00:00.001103 main     Package type: LINUX_64BITS_GENERIC
2024-10-30 23:54:42 (37740): Guest Log: 00:00:00.007265 main     5.2.32 r132073 started. Verbose level = 0
2024-10-30 23:54:43 (37740): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-10-30 23:54:43 (37740): Guest Log: [INFO] Mounting shared directory
2024-10-30 23:54:43 (37740): Guest Log: [INFO] Checking for init_data.xml
2024-10-30 23:54:52 (37740): Guest Log: 00:00:10.019675 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 196 349 681 000ns (GuestNow=1 730 325 284 768 872 000 ns GuestLast=1 730 332 481 118 553 000 ns fSetTimeLastLoop=true )
2024-10-30 23:55:18 (37740): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-10-30 23:55:18 (37740): Guest Log: [INFO] Detected branch: prod
2024-10-30 23:55:20 (37740): Guest Log: This is the prod version of the ATLAS job wrapper
2024-10-30 23:55:20 (37740): Guest Log: Copying input files
2024-10-30 23:55:22 (37740): Guest Log: Copied input files into RunAtlas.
2024-10-30 23:55:22 (37740): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-10-30 23:55:22 (37740): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-10-30 23:55:22 (37740): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-10-30 23:55:22 (37740): Guest Log: Further information can be found at the LHC@home message board.
2024-10-30 23:55:41 (37740): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-10-30 23:55:42 (37740): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-10-30 23:55:42 (37740): Guest Log: 2.6.3.0 1625 0 30040 138916 4 1 3117399 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-10-30 23:55:43 (37740): Guest Log: copied the webapp to /var/www
2024-10-30 23:55:43 (37740): Guest Log: ATHENA_PROC_NUMBER=4
2024-10-30 23:55:43 (37740): Guest Log: ATHENA_CORE_NUMBER=4
2024-10-30 23:55:45 (37740): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-10-30 23:55:45 (37740): Guest Log:  *** Starting ATLAS job. (PandaID=6384135468 taskID=41843729) ***
2024-10-31 01:34:13 (37740): Status Report: Elapsed Time: '6000.000000'
2024-10-31 01:34:13 (37740): Status Report: CPU Time: '860.937500'
2024-10-31 03:14:13 (37740): Status Report: Elapsed Time: '12000.000000'
2024-10-31 03:14:13 (37740): Status Report: CPU Time: '14147.890625'
2024-10-31 04:54:15 (37740): Status Report: Elapsed Time: '18000.000000'
2024-10-31 04:54:15 (37740): Status Report: CPU Time: '35183.109375'
2024-10-31 06:34:15 (37740): Status Report: Elapsed Time: '24000.000000'
2024-10-31 06:34:15 (37740): Status Report: CPU Time: '55223.859375'
2024-10-31 08:00:04 (37740): VM state change detected. (old = 'running', new = 'paused')
2024-10-31 10:00:04 (37740): VM state change detected. (old = 'paused', new = 'running')
2024-10-31 10:00:11 (37740): Guest Log: 08:05:30.020880 timesync vgsvcTimeSyncWorker: Radical host time change: 7 209 086 000 000ns (HostNow=1 730 361 609 314 000 000 ns HostLast=1 730 354 400 228 000 000 ns)
2024-10-31 10:00:21 (37740): Guest Log: 08:05:40.030191 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 214 576 639 000ns (GuestNow=1 730 361 619 334 747 000 ns GuestLast=1 730 354 404 758 108 000 ns fSetTimeLastLoop=true )
2024-10-31 10:14:16 (37740): Status Report: Elapsed Time: '30000.000000'
2024-10-31 10:14:16 (37740): Status Report: CPU Time: '74296.437500'
2024-10-31 10:30:19 (37740): Guest Log:  *** Job finished ***
2024-10-31 10:30:19 (37740): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:06,419 | INFO     | [payload] run_realtimelog thread has finished
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:06,463 | INFO     | [payload] failed_post thread has finished
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:08,876 | INFO     | [data] queue_monitor thread has finished
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:10,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718866011968)>', '<ExcThread(monitor, started 139718280857344)>']
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:10,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:10,914 | INFO     | [monitor] control thread has ended
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,464 | INFO     | all workflow threads have been joined
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,464 | INFO     | end of generic workflow (traces error code: 0)
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,464 | INFO     | traces error code: 0
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,664 [wrapper] ==== pilot stdout END ====
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,683 [wrapper] ==== wrapper stdout RESUME ====
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,705 [wrapper] pilotpid: 6255
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,710 [wrapper] Pilot exit status: 0
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,770 [wrapper] pandaids: 6384135468
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,880 [wrapper] cleanup supervisor_pilot 18097 6256
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,906 [wrapper] Test setup, not cleaning
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,914 [wrapper] ==== wrapper stdout END ====
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,923 [wrapper] ==== wrapper stderr END ====
2024-10-31 10:30:19 (37740): Guest Log: 2024-10-31 08:30:15,948 [wrapper] apfmon messages muted
2024-10-31 10:30:19 (37740): Guest Log:  *** Error codes and diagnostics ***
2024-10-31 10:30:19 (37740): Guest Log:     "exeErrorCode": 0,
2024-10-31 10:30:19 (37740): Guest Log:     "exeErrorDiag": "",
2024-10-31 10:30:19 (37740): Guest Log:     "pilotErrorCode": 0,
2024-10-31 10:30:19 (37740): Guest Log:     "pilotErrorDiag": "",
2024-10-31 10:30:19 (37740): Guest Log:  *** Listing of results directory ***
2024-10-31 10:30:19 (37740): Guest Log: total 101848
2024-10-31 10:30:19 (37740): Guest Log: -rw-r--r--. 1 atlas atlas   486088 Oct 30 21:16 pilot3.tar.gz
2024-10-31 10:30:19 (37740): Guest Log: -rw-r--r--. 1 atlas atlas     5652 Oct 30 21:17 queuedata.json
2024-10-31 10:30:19 (37740): Guest Log: -rwx------. 1 atlas atlas    34589 Oct 30 21:17 runpilot2-wrapper.sh
2024-10-31 10:30:19 (37740): Guest Log: -rwxr-xr-x. 1 atlas atlas     9182 Oct 30 21:55 init_data.xml
2024-10-31 10:30:19 (37740): Guest Log: -rwxr-xr-x. 1 atlas atlas   499917 Oct 30 21:55 input.tar.gz
2024-10-31 10:30:19 (37740): Guest Log: -rwxr-xr-x. 1 atlas atlas    17569 Oct 30 21:55 start_atlas.sh
2024-10-31 10:30:19 (37740): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Oct 30 21:55 EVNT.41780312._000016.pool.root.1 -> /data/./ATLAS.root_0
2024-10-31 10:30:19 (37740): Guest Log: -rw-r--r--. 1 atlas atlas     2848 Oct 30 21:55 pandaJob.out
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas      424 Oct 30 21:59 setup.sh.local
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas  1029661 Oct 30 22:21 agis_schedconf.cvmfs.json
2024-10-31 10:30:19 (37740): Guest Log: drwx------. 4 atlas atlas     4096 Oct 30 22:21 pilot3
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas 93605113 Oct 31 08:28 HITS.41843729._002361.pool.root.1
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas     1040 Oct 31 08:28 memory_monitor_summary.json
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas  1611897 Oct 31 08:29 agis_ddmendpoints.agis.ALL.json
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas   991061 Oct 31 08:29 log.41843729._002361.job.log.tgz.1
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas       97 Oct 31 08:29 pilot_heartbeat.json
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas     8577 Oct 31 08:30 heartbeat.json
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas     4398 Oct 31 08:30 pilotlog.txt
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas  2446418 Oct 31 08:30 log.41843729._002361.job.log.1
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas      353 Oct 31 08:30 output.list
2024-10-31 10:30:19 (37740): Guest Log: -rw-r--r--. 1 atlas atlas      620 Oct 31 08:30 runtime_log
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas  3461120 Oct 31 08:30 result.tar.gz
2024-10-31 10:30:19 (37740): Guest Log: -rw-r--r--. 1 atlas atlas    10914 Oct 31 08:30 runtime_log.err
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas      654 Oct 31 08:30 0SdMDmfFVQ6n9Rq4apOajLDm4fhM0noT9bVorHsSDmjCULDm9nncsm.diag
2024-10-31 10:30:19 (37740): Guest Log: Looking for outputfile HITS.41843729._002361.pool.root.1
2024-10-31 10:30:19 (37740): Guest Log: HITS file was successfully produced
2024-10-31 10:30:19 (37740): Guest Log: -rw-------. 1 atlas atlas 93605113 Oct 31 08:28 /home/atlas/RunAtlas/HITS.41843729._002361.pool.root.1
2024-10-31 10:30:20 (37740): Guest Log: Successfully finished the ATLAS job!
2024-10-31 10:30:20 (37740): Guest Log: Copying the results back to the shared directory!
2024-10-31 10:30:20 (37740): Guest Log:  *** Contents of shared directory: ***
2024-10-31 10:30:20 (37740): Guest Log: total 441404
2024-10-31 10:30:20 (37740): Guest Log: -rwxrwxrwx. 1 root root 354391229 Oct 30 21:53 ATLAS.root_0
2024-10-31 10:30:20 (37740): Guest Log: -rwxrwxrwx. 1 root root  93605113 Oct 31  2024 HITS.pool.root.1
2024-10-31 10:30:20 (37740): Guest Log: -rwxrwxrwx. 1 root root      9182 Oct 30 21:53 init_data.xml
2024-10-31 10:30:20 (37740): Guest Log: -rwxrwxrwx. 1 root root    499917 Oct 30 21:53 input.tar.gz
2024-10-31 10:30:20 (37740): Guest Log: -rwxrwxrwx. 1 root root   3461120 Oct 31  2024 result.tar.gz
2024-10-31 10:30:20 (37740): Guest Log: -rwxrwxrwx. 1 root root     17569 Oct 30 21:53 start_atlas.sh
2024-10-31 10:30:20 (37740): Guest Log:  *** Success! Shutting down the machine. ***
2024-10-31 10:30:21 (37740): VM Completion File Detected.
2024-10-31 10:30:21 (37740): Powering off VM.
2024-10-31 10:30:22 (37740): Successfully stopped VM.
2024-10-31 10:30:22 (37740): Deregistering VM. (boinc_cd3b00c7b6c40774, slot#37)
2024-10-31 10:30:23 (37740): Removing network bandwidth throttle group from VM.
2024-10-31 10:30:23 (37740): Removing VM from VirtualBox.
10:30:28 (37740): called boinc_finish(0)

</stderr_txt>
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