Name 5i9NDmKOHQ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmf8DMDmqHQ89m_0
Workunit 226579812
Created 30 Oct 2024, 6:30:01 UTC
Sent 30 Oct 2024, 6:57:35 UTC
Report deadline 7 Nov 2024, 6:57:35 UTC
Received 30 Oct 2024, 18:09:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10821155
Run time 1 hours 52 min 35 sec
CPU time 3 hours 35 min 38 sec
Validate state Valid
Credit 411.42
Device peak FLOPS 50.11 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 3.99 GB
Peak swap size 5.48 GB
Peak disk usage 2.30 GB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2024-10-30 16:16:51 (105328): Detected: vboxwrapper 26206
2024-10-30 16:16:51 (105328): Detected: BOINC client v8.0.4
2024-10-30 16:16:51 (105328): Detected: VirtualBox VboxManage Interface (Version: 7.1.0)
2024-10-30 16:16:51 (105328): Successfully copied 'init_data.xml' to the shared directory.
2024-10-30 16:16:51 (105328): Create VM. (boinc_bd8b282eb5eccd1d, slot#0)
2024-10-30 16:16:51 (105328): Setting Memory Size for VM. (4600MB)
2024-10-30 16:16:51 (105328): Setting CPU Count for VM. (6)
2024-10-30 16:16:51 (105328): Setting Chipset Options for VM.
2024-10-30 16:16:51 (105328): Setting Graphics Controller Options for VM.
2024-10-30 16:16:51 (105328): Setting Boot Options for VM.
2024-10-30 16:16:51 (105328): Setting Network Configuration for NAT.
2024-10-30 16:16:52 (105328): Enabling VM Network Access.
2024-10-30 16:16:52 (105328): Disabling USB Support for VM.
2024-10-30 16:16:52 (105328): Disabling COM Port Support for VM.
2024-10-30 16:16:52 (105328): Disabling LPT Port Support for VM.
2024-10-30 16:16:52 (105328): Disabling Audio Support for VM.
2024-10-30 16:16:52 (105328): Disabling Clipboard Support for VM.
2024-10-30 16:16:52 (105328): Disabling Drag and Drop Support for VM.
2024-10-30 16:16:52 (105328): Adding storage controller(s) to VM.
2024-10-30 16:16:52 (105328): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-10-30 16:16:53 (105328): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-10-30 16:16:53 (105328): forwarding host port 54389 to guest port 80
2024-10-30 16:16:53 (105328): Enabling remote desktop for VM.
2024-10-30 16:16:53 (105328): Required extension pack not installed, remote desktop not enabled.
2024-10-30 16:16:53 (105328): Enabling shared directory for VM.
2024-10-30 16:16:53 (105328): Starting VM using VBoxManage interface. (boinc_bd8b282eb5eccd1d, slot#0)
2024-10-30 16:16:54 (105328): Successfully started VM. (PID = '105585')
2024-10-30 16:16:54 (105328): Reporting VM Process ID to BOINC.
2024-10-30 16:16:54 (105328): Guest Log: BIOS: VirtualBox 7.1.0
2024-10-30 16:16:54 (105328): Guest Log: CPUID EDX: 0x178bfbff
2024-10-30 16:16:54 (105328): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-10-30 16:16:54 (105328): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-10-30 16:16:54 (105328): VM state change detected. (old = 'poweredoff', new = 'running')
2024-10-30 16:16:54 (105328): Detected: Web Application Enabled (http://localhost:54389)
2024-10-30 16:16:54 (105328): Preference change detected
2024-10-30 16:16:54 (105328): Setting CPU throttle for VM. (50%)
2024-10-30 16:16:54 (105328): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-10-30 16:16:56 (105328): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-10-30 16:16:56 (105328): Guest Log: BIOS: Booting from Hard Disk...
2024-10-30 16:16:59 (105328): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-10-30 16:16:59 (105328): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-10-30 16:16:59 (105328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-10-30 16:17:04 (105328): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-10-30 16:17:04 (105328): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-10-30 16:17:09 (105328): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-10-30 16:17:09 (105328): Guest Log: 00:00:00.000093 main     Log opened 2024-10-30T15:17:07.483556000Z
2024-10-30 16:17:09 (105328): Guest Log: 00:00:00.000156 main     OS Product: Linux
2024-10-30 16:17:09 (105328): Guest Log: 00:00:00.000170 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-10-30 16:17:09 (105328): Guest Log: 00:00:00.000179 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-10-30 16:17:09 (105328): Guest Log: 00:00:00.000188 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-10-30 16:17:09 (105328): Guest Log: 00:00:00.000188 main     Process ID: 1331
2024-10-30 16:17:09 (105328): Guest Log: 00:00:00.000188 main     Package type: LINUX_64BITS_GENERIC
2024-10-30 16:17:09 (105328): Guest Log: 00:00:00.000557 main     5.2.32 r132073 started. Verbose level = 0
2024-10-30 16:17:09 (105328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-10-30 16:17:09 (105328): Guest Log: [INFO] Mounting shared directory
2024-10-30 16:17:09 (105328): Guest Log: [INFO] Checking for init_data.xml
2024-10-30 16:17:11 (105328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-10-30 16:17:11 (105328): Guest Log: [INFO] Detected branch: prod
2024-10-30 16:17:11 (105328): Guest Log: This is the prod version of the ATLAS job wrapper
2024-10-30 16:17:11 (105328): Guest Log: Copying input files
2024-10-30 16:17:12 (105328): Guest Log: Copied input files into RunAtlas.
2024-10-30 16:17:12 (105328): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-10-30 16:17:12 (105328): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-10-30 16:17:12 (105328): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-10-30 16:17:12 (105328): Guest Log: Further information can be found at the LHC@home message board.
2024-10-30 16:17:19 (105328): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-10-30 16:17:19 (105328): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-10-30 16:17:19 (105328): Guest Log: 2.6.3.0 1607 0 32268 138905 4 1 3117399 4096000 0 65024 0 0 n/a 1 4 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-10-30 16:17:19 (105328): Guest Log: copied the webapp to /var/www
2024-10-30 16:17:19 (105328): Guest Log: ATHENA_PROC_NUMBER=6
2024-10-30 16:17:19 (105328): Guest Log: ATHENA_CORE_NUMBER=6
2024-10-30 16:17:19 (105328): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-10-30 16:17:20 (105328): Guest Log:  *** Starting ATLAS job. (PandaID=6383373505 taskID=41843694) ***
2024-10-30 17:55:54 (105328): Status Report: Elapsed Time: '6000.000000'
2024-10-30 17:55:54 (105328): Status Report: CPU Time: '11879.570000'
2024-10-30 18:09:19 (105328): Guest Log:  *** Job finished ***
2024-10-30 18:09:19 (105328): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:07,212 | INFO     | [data] queue_monitor thread has finished
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:12,241 | INFO     | job.realtimelogging is not enabled
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:13,242 | INFO     | [payload] run_realtimelog thread has finished
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:13,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940506023744)>', '<ExcThread(monitor, started 139940075652864)>']
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:14,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:14,505 | INFO     | [monitor] control thread has ended
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,858 | INFO     | all workflow threads have been joined
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,859 | INFO     | end of generic workflow (traces error code: 0)
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,859 | INFO     | traces error code: 0
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,914 [wrapper] ==== pilot stdout END ====
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,916 [wrapper] ==== wrapper stdout RESUME ====
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,919 [wrapper] pilotpid: 5952
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,921 [wrapper] Pilot exit status: 0
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,929 [wrapper] pandaids: 6383373505
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,966 [wrapper] cleanup supervisor_pilot  7303 5953
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,969 [wrapper] Test setup, not cleaning
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,972 [wrapper] ==== wrapper stdout END ====
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,974 [wrapper] ==== wrapper stderr END ====
2024-10-30 18:09:19 (105328): Guest Log: 2024-10-30 17:09:18,981 [wrapper] apfmon messages muted
2024-10-30 18:09:19 (105328): Guest Log:  *** Error codes and diagnostics ***
2024-10-30 18:09:19 (105328): Guest Log:     "exeErrorCode": 0,
2024-10-30 18:09:19 (105328): Guest Log:     "exeErrorDiag": "",
2024-10-30 18:09:19 (105328): Guest Log:     "pilotErrorCode": 0,
2024-10-30 18:09:19 (105328): Guest Log:     "pilotErrorDiag": "",
2024-10-30 18:09:19 (105328): Guest Log:  *** Listing of results directory ***
2024-10-30 18:09:19 (105328): Guest Log: total 108212
2024-10-30 18:09:19 (105328): Guest Log: -rw-r--r--. 1 atlas atlas    486088 Oct 30 06:19 pilot3.tar.gz
2024-10-30 18:09:19 (105328): Guest Log: -rw-r--r--. 1 atlas atlas      5653 Oct 30 06:29 queuedata.json
2024-10-30 18:09:19 (105328): Guest Log: -rwx------. 1 atlas atlas     34589 Oct 30 06:29 runpilot2-wrapper.sh
2024-10-30 18:09:19 (105328): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Oct 30 15:17 start_atlas.sh
2024-10-30 18:09:19 (105328): Guest Log: -rw-r--r--. 1 atlas atlas    499928 Oct 30 15:17 input.tar.gz
2024-10-30 18:09:19 (105328): Guest Log: -rw-r--r--. 1 atlas atlas      6887 Oct 30 15:17 init_data.xml
2024-10-30 18:09:19 (105328): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 30 15:17 EVNT.41780242._000016.pool.root.1 -> /data/./ATLAS.root_0
2024-10-30 18:09:19 (105328): Guest Log: -rw-r--r--. 1 atlas atlas      2889 Oct 30 15:17 pandaJob.out
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas       424 Oct 30 15:17 setup.sh.local
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas   1028253 Oct 30 15:17 agis_schedconf.cvmfs.json
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas   1611897 Oct 30 15:17 agis_ddmendpoints.agis.ALL.json
2024-10-30 18:09:19 (105328): Guest Log: drwx------. 4 atlas atlas      4096 Oct 30 15:17 pilot3
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas        95 Oct 30 17:08 pilot_heartbeat.json
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas 104010924 Oct 30 17:08 HITS.41843694._003633.pool.root.1
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas      1035 Oct 30 17:08 memory_monitor_summary.json
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas   1001028 Oct 30 17:08 log.41843694._003633.job.log.tgz.1
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas      8584 Oct 30 17:08 heartbeat.json
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas      4347 Oct 30 17:09 pilotlog.txt
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas    499378 Oct 30 17:09 log.41843694._003633.job.log.1
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas       353 Oct 30 17:09 output.list
2024-10-30 18:09:19 (105328): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 30 17:09 runtime_log
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas   1515520 Oct 30 17:09 result.tar.gz
2024-10-30 18:09:19 (105328): Guest Log: -rw-r--r--. 1 atlas atlas     11027 Oct 30 17:09 runtime_log.err
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas       685 Oct 30 17:09 5i9NDmKOHQ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmf8DMDmqHQ89m.diag
2024-10-30 18:09:19 (105328): Guest Log: Looking for outputfile HITS.41843694._003633.pool.root.1
2024-10-30 18:09:19 (105328): Guest Log: HITS file was successfully produced
2024-10-30 18:09:19 (105328): Guest Log: -rw-------. 1 atlas atlas 104010924 Oct 30 17:08 /home/atlas/RunAtlas/HITS.41843694._003633.pool.root.1
2024-10-30 18:09:20 (105328): Guest Log: Successfully finished the ATLAS job!
2024-10-30 18:09:20 (105328): Guest Log: Copying the results back to the shared directory!
2024-10-30 18:09:20 (105328): Guest Log:  *** Contents of shared directory: ***
2024-10-30 18:09:20 (105328): Guest Log: total 377924
2024-10-30 18:09:20 (105328): Guest Log: -rw-r--r--. 1 root root 384939365 Oct 30 15:16 ATLAS.root_0
2024-10-30 18:09:20 (105328): Guest Log: -rw-r--r--. 1 root root      6887 Oct 30 15:16 init_data.xml
2024-10-30 18:09:20 (105328): Guest Log: -rw-r--r--. 1 root root    499928 Oct 30 15:16 input.tar.gz
2024-10-30 18:09:20 (105328): Guest Log: -rw-r--r--. 1 root root   1515520 Oct 30 17:09 result.tar.gz
2024-10-30 18:09:20 (105328): Guest Log: -rw-r--r--. 1 root root     17569 Oct 30 15:16 start_atlas.sh
2024-10-30 18:09:20 (105328): Guest Log:  *** Success! Shutting down the machine. ***
2024-10-30 18:09:20 (105328): VM Completion File Detected.
2024-10-30 18:09:20 (105328): Powering off VM.
2024-10-30 18:09:21 (105328): Successfully stopped VM.
2024-10-30 18:09:21 (105328): Deregistering VM. (boinc_bd8b282eb5eccd1d, slot#0)
2024-10-30 18:09:21 (105328): Removing network bandwidth throttle group from VM.
2024-10-30 18:09:21 (105328): Removing VM from VirtualBox.
18:09:26 (105328): called boinc_finish(0)

</stderr_txt>
]]>


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