| Name | vlALDml99P6n9Rq4apOajLDm4fhM0noT9bVorHsSDmmwOLDmORRhom_0 |
| Workunit | 226554111 |
| Created | 29 Oct 2024, 22:46:38 UTC |
| Sent | 29 Oct 2024, 23:21:57 UTC |
| Report deadline | 6 Nov 2024, 23:21:57 UTC |
| Received | 30 Oct 2024, 2:41:13 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 10806633 |
| Run time | 1 hours 10 min 50 sec |
| CPU time | 3 min 22 sec |
| Validate state | Valid |
| Credit | 272.95 |
| Device peak FLOPS | 24.82 GFLOPS |
| Application version | ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas) windows_x86_64 |
| Peak working set size | 74.38 MB |
| Peak swap size | 66.47 MB |
| Peak disk usage | 2.06 GB |
Stderr output
<core_client_version>8.0.2</core_client_version> <![CDATA[ <stderr_txt> 2024-10-30 01:30:05 (13400): Detected: vboxwrapper 26206 2024-10-30 01:30:05 (13400): Detected: BOINC client v8.0.2 2024-10-30 01:30:06 (13400): Detected: VirtualBox VboxManage Interface (Version: 7.1.0) 2024-10-30 01:30:06 (13400): Successfully copied 'init_data.xml' to the shared directory. 2024-10-30 01:30:06 (13400): Create VM. (boinc_7410ef59ff70a032, slot#1) 2024-10-30 01:30:07 (13400): Setting Memory Size for VM. (4400MB) 2024-10-30 01:30:07 (13400): Setting CPU Count for VM. (4) 2024-10-30 01:30:07 (13400): Setting Chipset Options for VM. 2024-10-30 01:30:08 (13400): Setting Graphics Controller Options for VM. 2024-10-30 01:30:08 (13400): Setting Boot Options for VM. 2024-10-30 01:30:08 (13400): Setting Network Configuration for NAT. 2024-10-30 01:30:09 (13400): Enabling VM Network Access. 2024-10-30 01:30:09 (13400): Disabling USB Support for VM. 2024-10-30 01:30:09 (13400): Disabling COM Port Support for VM. 2024-10-30 01:30:09 (13400): Disabling LPT Port Support for VM. 2024-10-30 01:30:10 (13400): Disabling Audio Support for VM. 2024-10-30 01:30:10 (13400): Disabling Clipboard Support for VM. 2024-10-30 01:30:10 (13400): Disabling Drag and Drop Support for VM. 2024-10-30 01:30:10 (13400): Adding storage controller(s) to VM. 2024-10-30 01:30:11 (13400): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi) 2024-10-30 01:30:14 (13400): Adding VirtualBox Guest Additions to VM. 2024-10-30 01:30:14 (13400): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2024-10-30 01:30:14 (13400): forwarding host port 58411 to guest port 80 2024-10-30 01:30:14 (13400): Enabling remote desktop for VM. 2024-10-30 01:30:15 (13400): Required extension pack not installed, remote desktop not enabled. 2024-10-30 01:30:15 (13400): Enabling shared directory for VM. 2024-10-30 01:30:15 (13400): Starting VM using VBoxManage interface. (boinc_7410ef59ff70a032, slot#1) 2024-10-30 01:30:19 (13400): Successfully started VM. (PID = '16052') 2024-10-30 01:30:19 (13400): Reporting VM Process ID to BOINC. 2024-10-30 01:30:19 (13400): Guest Log: BIOS: VirtualBox 7.1.0 2024-10-30 01:30:19 (13400): Guest Log: CPUID EDX: 0x178bfbff 2024-10-30 01:30:19 (13400): Guest Log: BIOS: No PCI IDE controller, not probing IDE 2024-10-30 01:30:19 (13400): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors 2024-10-30 01:30:19 (13400): VM state change detected. (old = 'poweredoff', new = 'running') 2024-10-30 01:30:19 (13400): Detected: Web Application Enabled (http://localhost:58411) 2024-10-30 01:30:19 (13400): Preference change detected 2024-10-30 01:30:19 (13400): Setting CPU throttle for VM. (100%) 2024-10-30 01:30:19 (13400): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 420 seconds) or (Vbox_job.xml: 900 seconds)) 2024-10-30 01:30:21 (13400): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2024-10-30 01:30:21 (13400): Guest Log: BIOS: Booting from Hard Disk... 2024-10-30 01:30:24 (13400): Guest Log: BIOS: KBD: unsupported int 16h function 03 2024-10-30 01:30:24 (13400): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f 2024-10-30 01:30:24 (13400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f 2024-10-30 01:30:29 (13400): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2024-10-30 01:30:29 (13400): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2024-10-30 01:30:34 (13400): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log 2024-10-30 01:30:34 (13400): Guest Log: 00:00:00.000118 main Log opened 2024-10-30T01:30:31.186260000Z 2024-10-30 01:30:34 (13400): Guest Log: 00:00:00.000192 main OS Product: Linux 2024-10-30 01:30:34 (13400): Guest Log: 00:00:00.000230 main OS Release: 3.10.0-957.27.2.el7.x86_64 2024-10-30 01:30:34 (13400): Guest Log: 00:00:00.000249 main OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019 2024-10-30 01:30:34 (13400): Guest Log: 00:00:00.000265 main Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService 2024-10-30 01:30:34 (13400): Guest Log: 00:00:00.000266 main Process ID: 1302 2024-10-30 01:30:34 (13400): Guest Log: 00:00:00.000266 main Package type: LINUX_64BITS_GENERIC 2024-10-30 01:30:34 (13400): Guest Log: 00:00:00.000614 main 5.2.32 r132073 started. Verbose level = 0 2024-10-30 01:30:35 (13400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... 2024-10-30 01:30:35 (13400): Guest Log: [INFO] Mounting shared directory 2024-10-30 01:30:35 (13400): Guest Log: [INFO] Checking for init_data.xml 2024-10-30 01:31:15 (13400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK 2024-10-30 01:31:15 (13400): Guest Log: [INFO] Detected branch: prod 2024-10-30 01:31:16 (13400): Guest Log: This is the prod version of the ATLAS job wrapper 2024-10-30 01:31:16 (13400): Guest Log: Copying input files 2024-10-30 01:31:17 (13400): Guest Log: Copied input files into RunAtlas. 2024-10-30 01:31:18 (13400): Guest Log: This VM did not configure a local http proxy via BOINC. 2024-10-30 01:31:18 (13400): Guest Log: Small home clusters do not require a local http proxy but it is suggested if 2024-10-30 01:31:18 (13400): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. 2024-10-30 01:31:18 (13400): Guest Log: Further information can be found at the LHC@home message board. 2024-10-30 01:31:33 (13400): Guest Log: Running cvmfs_config stat atlas.cern.ch 2024-10-30 01:31:34 (13400): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE 2024-10-30 01:31:34 (13400): Guest Log: 2.6.3.0 1606 0 32200 138883 4 1 3117399 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1 2024-10-30 01:31:35 (13400): Guest Log: copied the webapp to /var/www 2024-10-30 01:31:35 (13400): Guest Log: ATHENA_PROC_NUMBER=4 2024-10-30 01:31:35 (13400): Guest Log: ATHENA_CORE_NUMBER=4 2024-10-30 01:31:37 (13400): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 2024-10-30 01:31:37 (13400): Guest Log: *** Starting ATLAS job. (PandaID=6383054885 taskID=41843676) *** 2024-10-30 02:40:47 (13400): Guest Log: *** Job finished *** 2024-10-30 02:40:47 (13400): Guest Log: *** The last 20 lines of the pilot log: *** 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:34,833 | INFO | [payload] failed_post thread has finished 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:35,495 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:39,679 | INFO | [data] queue_monitor thread has finished 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:41,202 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135724775232)>', '<ExcThread(monitor, started 140134909470464)>'] 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:42,004 | WARNING | job_aborted has been set - aborting pilot monitoring 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:42,004 | INFO | [monitor] control thread has ended 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,206 | INFO | all workflow threads have been joined 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,207 | INFO | end of generic workflow (traces error code: 0) 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,207 | INFO | traces error code: 0 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,207 | INFO | pilot has finished (exit code=0, shell exit code=0) 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,239 [wrapper] ==== pilot stdout END ==== 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,241 [wrapper] ==== wrapper stdout RESUME ==== 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,244 [wrapper] pilotpid: 6235 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,246 [wrapper] Pilot exit status: 0 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,252 [wrapper] pandaids: 6383054885 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,266 [wrapper] cleanup supervisor_pilot 23529 6236 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,268 [wrapper] Test setup, not cleaning 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,270 [wrapper] ==== wrapper stdout END ==== 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,272 [wrapper] ==== wrapper stderr END ==== 2024-10-30 02:40:47 (13400): Guest Log: 2024-10-30 02:40:46,276 [wrapper] apfmon messages muted 2024-10-30 02:40:47 (13400): Guest Log: *** Error codes and diagnostics *** 2024-10-30 02:40:47 (13400): Guest Log: "exeErrorCode": 65, 2024-10-30 02:40:47 (13400): Guest Log: "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: <NONE>; Current Function: unknown\"", 2024-10-30 02:40:47 (13400): Guest Log: "pilotErrorCode": 1305, 2024-10-30 02:40:47 (13400): Guest Log: "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-10-30 02:37:49,603 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm", 2024-10-30 02:40:47 (13400): Guest Log: *** Listing of results directory *** 2024-10-30 02:40:47 (13400): Guest Log: total 4500 2024-10-30 02:40:47 (13400): Guest Log: -rw-r--r--. 1 atlas atlas 486088 Oct 29 22:37 pilot3.tar.gz 2024-10-30 02:40:47 (13400): Guest Log: -rw-r--r--. 1 atlas atlas 5653 Oct 29 22:46 queuedata.json 2024-10-30 02:40:47 (13400): Guest Log: -rwx------. 1 atlas atlas 34589 Oct 29 22:46 runpilot2-wrapper.sh 2024-10-30 02:40:47 (13400): Guest Log: -rwxr-xr-x. 1 atlas atlas 9298 Oct 30 01:31 init_data.xml 2024-10-30 02:40:47 (13400): Guest Log: -rwxr-xr-x. 1 atlas atlas 499915 Oct 30 01:31 input.tar.gz 2024-10-30 02:40:47 (13400): Guest Log: -rwxr-xr-x. 1 atlas atlas 17569 Oct 30 01:31 start_atlas.sh 2024-10-30 02:40:47 (13400): Guest Log: lrwxrwxrwx. 1 atlas atlas 20 Oct 30 01:31 EVNT.41780202._000004.pool.root.1 -> /data/./ATLAS.root_0 2024-10-30 02:40:47 (13400): Guest Log: -rw-r--r--. 1 atlas atlas 2885 Oct 30 01:31 pandaJob.out 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 424 Oct 30 01:33 setup.sh.local 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 1611897 Oct 30 01:46 agis_ddmendpoints.agis.ALL.json 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 1028814 Oct 30 01:47 agis_schedconf.cvmfs.json 2024-10-30 02:40:47 (13400): Guest Log: drwx------. 4 atlas atlas 4096 Oct 30 01:47 pilot3 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 1017 Oct 30 02:37 memory_monitor_summary.json 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 92834 Oct 30 02:37 log.41843676._010375.job.log.tgz.1 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 95 Oct 30 02:40 pilot_heartbeat.json 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 9247 Oct 30 02:40 heartbeat.json 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 4275 Oct 30 02:40 pilotlog.txt 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 310863 Oct 30 02:40 log.41843676._010375.job.log.1 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 186 Oct 30 02:40 output.list 2024-10-30 02:40:47 (13400): Guest Log: -rw-r--r--. 1 atlas atlas 620 Oct 30 02:40 runtime_log 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 419840 Oct 30 02:40 result.tar.gz 2024-10-30 02:40:47 (13400): Guest Log: -rw-------. 1 atlas atlas 655 Oct 30 02:40 vlALDml99P6n9Rq4apOajLDm4fhM0noT9bVorHsSDmmwOLDmORRhom.diag 2024-10-30 02:40:47 (13400): Guest Log: -rw-r--r--. 1 atlas atlas 10812 Oct 30 02:40 runtime_log.err 2024-10-30 02:40:47 (13400): Guest Log: Looking for outputfile HITS.41843676._010375.pool.root.1 2024-10-30 02:40:47 (13400): Guest Log: No HITS file was produced 2024-10-30 02:40:47 (13400): Guest Log: Successfully finished the ATLAS job! 2024-10-30 02:40:47 (13400): Guest Log: Copying the results back to the shared directory! 2024-10-30 02:40:47 (13400): Guest Log: *** Contents of shared directory: *** 2024-10-30 02:40:47 (13400): Guest Log: total 373048 2024-10-30 02:40:47 (13400): Guest Log: -rwxrwxrwx. 1 root root 381040360 Oct 30 01:30 ATLAS.root_0 2024-10-30 02:40:47 (13400): Guest Log: -rwxrwxrwx. 1 root root 9298 Oct 30 01:30 init_data.xml 2024-10-30 02:40:47 (13400): Guest Log: -rwxrwxrwx. 1 root root 499915 Oct 29 23:22 input.tar.gz 2024-10-30 02:40:47 (13400): Guest Log: -rwxrwxrwx. 1 root root 419840 Oct 30 02:40 result.tar.gz 2024-10-30 02:40:47 (13400): Guest Log: -rwxrwxrwx. 1 root root 17569 Oct 29 23:22 start_atlas.sh 2024-10-30 02:40:47 (13400): Guest Log: *** Success! Shutting down the machine. *** 2024-10-30 02:40:47 (13400): VM Completion File Detected. 2024-10-30 02:40:47 (13400): Powering off VM. 2024-10-30 02:40:48 (13400): Successfully stopped VM. 2024-10-30 02:40:48 (13400): Deregistering VM. (boinc_7410ef59ff70a032, slot#1) 2024-10-30 02:40:48 (13400): Removing network bandwidth throttle group from VM. 2024-10-30 02:40:48 (13400): Removing VM from VirtualBox. 02:40:54 (13400): called boinc_finish(0) </stderr_txt> ]]>
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