| Name | dthKDmKW4O6n9Rq4apOajLDm4fhM0noT9bVorHsSDm7xBLDmOFmEcm_0 |
| Workunit | 226372331 |
| Created | 26 Oct 2024, 22:33:29 UTC |
| Sent | 26 Oct 2024, 23:14:22 UTC |
| Report deadline | 3 Nov 2024, 23:14:22 UTC |
| Received | 27 Oct 2024, 1:59:46 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 10804956 |
| Run time | 2 hours 44 min 50 sec |
| CPU time | 5 hours 23 min 37 sec |
| Validate state | Valid |
| Credit | 466.70 |
| Device peak FLOPS | 43.24 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.60 GB |
| Peak swap size | 2.19 GB |
| Peak disk usage | 764.39 MB |
Stderr output
<core_client_version>7.7.0</core_client_version> <![CDATA[ <stderr_txt> 19:14:45 (23918): wrapper (7.7.26015): starting 19:14:45 (23918): wrapper: running run_atlas (--nthreads 8) [2024-10-26 19:14:45] Arguments: --nthreads 8 [2024-10-26 19:14:45] Threads: 8 [2024-10-26 19:14:45] Checking for CVMFS [2024-10-26 19:14:45] Probing /cvmfs/atlas.cern.ch... OK [2024-10-26 19:14:46] Probing /cvmfs/atlas-condb.cern.ch... OK [2024-10-26 19:14:46] Running cvmfs_config stat atlas.cern.ch [2024-10-26 19:14:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2024-10-26 19:14:46] 2.11.2.0 75320 1607 91836 138774 1 358 11434698 18432001 22873 130560 0 12547441 99.474 13153344 59653 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1 [2024-10-26 19:14:46] CVMFS is ok [2024-10-26 19:14:46] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-10-26 19:14:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-10-26 19:14:46] Further information can be found at the LHC@home message board. [2024-10-26 19:14:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-10-26 19:14:46] Checking for apptainer binary... [2024-10-26 19:14:46] Using apptainer found in PATH at /usr/bin/apptainer [2024-10-26 19:14:46] Running /usr/bin/apptainer --version [2024-10-26 19:14:46] apptainer version 1.3.2-1.el7 [2024-10-26 19:14:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-10-26 19:14:48] c-212-11.aglt2.org [2024-10-26 19:14:48] apptainer works [2024-10-26 19:14:48] Set ATHENA_PROC_NUMBER=8 [2024-10-26 19:14:48] Set ATHENA_CORE_NUMBER=8 [2024-10-26 19:14:48] Starting ATLAS job with PandaID=6379826975 [2024-10-26 19:14:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2024-10-26 21:59:32] *** The last 200 lines of the pilot log: *** [2024-10-26 21:59:32] 2024-10-27 01:56:09,025 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:56:11,532 | INFO | monitor loop #672: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:56:12,545 | INFO | 9653s have passed since pilot start [2024-10-26 21:59:32] 2024-10-27 01:56:22,169 | INFO | (instant) CPU consumption time for pid=64439: 12232.3 (rounded to 12232) [2024-10-26 21:59:32] 2024-10-27 01:56:22,170 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:56:22,170 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:56:22,235 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:56:22,235 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:56:22,239 | INFO | max memory (maxPSS) used by the payload is within the allowed limit: 2678325 B (2 * maxRSS = 65536000 B, memkillgrace = 100%) [2024-10-26 21:59:32] 2024-10-27 01:56:22,239 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:56:22,240 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 651231 B [2024-10-26 21:59:32] 2024-10-27 01:56:22,240 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 6611 B [2024-10-26 21:59:32] 2024-10-27 01:56:22,240 | INFO | executing command: df -mP /tmp/boinchome/slots/1 [2024-10-26 21:59:32] 2024-10-27 01:56:22,340 | INFO | sufficient remaining disk space (102075727872 B) [2024-10-26 21:59:32] 2024-10-27 01:56:22,340 | INFO | work directory size check will use 5767168000 B as a max limit (10% grace limit added) [2024-10-26 21:59:32] 2024-10-27 01:56:22,346 | INFO | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6379826975: 82825669 B (within 5767168000 B limit) [2024-10-26 21:59:32] 2024-10-27 01:56:22,347 | INFO | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6379826975/HITS.41780302._000999.pool.root.1 does not exist (skip from workdir size calculation) [2024-10-26 21:59:32] 2024-10-27 01:56:22,347 | INFO | total size of present files: 0 B (workdir size: 82825669 B) [2024-10-26 21:59:32] 2024-10-27 01:56:22,347 | INFO | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/HITS.41780302._000999.pool.root.1 since it does not exist [2024-10-26 21:59:32] 2024-10-27 01:56:22,624 | INFO | number of running child processes to parent process 64439: 8 [2024-10-26 21:59:32] 2024-10-27 01:56:22,625 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:56:25,128 | INFO | monitor loop #673: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:56:35,676 | INFO | (instant) CPU consumption time for pid=64439: 12232.31 (rounded to 12232) [2024-10-26 21:59:32] 2024-10-27 01:56:35,676 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:56:35,676 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:56:35,679 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:56:35,921 | INFO | number of running child processes to parent process 64439: 8 [2024-10-26 21:59:32] 2024-10-27 01:56:35,921 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:56:38,426 | INFO | monitor loop #674: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:56:48,927 | INFO | (instant) CPU consumption time for pid=64439: 12232.31 (rounded to 12232) [2024-10-26 21:59:32] 2024-10-27 01:56:48,927 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:56:48,928 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:56:48,931 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:56:49,240 | INFO | number of running child processes to parent process 64439: 8 [2024-10-26 21:59:32] 2024-10-27 01:56:49,241 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:56:51,746 | INFO | monitor loop #675: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:57:02,058 | INFO | (instant) CPU consumption time for pid=64439: 14656.159999999998 (rounded to 14656) [2024-10-26 21:59:32] 2024-10-27 01:57:02,059 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:57:02,059 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:57:02,062 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:57:02,601 | INFO | number of running child processes to parent process 64439: 7 [2024-10-26 21:59:32] 2024-10-27 01:57:02,601 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:57:05,105 | INFO | monitor loop #676: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:57:15,843 | INFO | (instant) CPU consumption time for pid=64439: 14656.159999999998 (rounded to 14656) [2024-10-26 21:59:32] 2024-10-27 01:57:15,844 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:57:15,844 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:57:15,851 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:57:16,334 | INFO | number of running child processes to parent process 64439: 7 [2024-10-26 21:59:32] 2024-10-27 01:57:16,335 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:57:18,847 | INFO | monitor loop #677: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:57:29,467 | INFO | (instant) CPU consumption time for pid=64439: 14656.479999999998 (rounded to 14656) [2024-10-26 21:59:32] 2024-10-27 01:57:29,468 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:57:29,468 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:57:29,471 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:57:30,016 | INFO | number of running child processes to parent process 64439: 7 [2024-10-26 21:59:32] 2024-10-27 01:57:30,017 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:57:32,521 | INFO | monitor loop #678: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:57:42,848 | INFO | (instant) CPU consumption time for pid=64439: 14656.479999999998 (rounded to 14656) [2024-10-26 21:59:32] 2024-10-27 01:57:42,848 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:57:42,849 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:57:42,852 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:57:42,852 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:57:42,855 | INFO | max memory (maxPSS) used by the payload is within the allowed limit: 2678325 B (2 * maxRSS = 65536000 B, memkillgrace = 100%) [2024-10-26 21:59:32] 2024-10-27 01:57:42,855 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:57:42,856 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 651231 B [2024-10-26 21:59:32] 2024-10-27 01:57:42,856 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 6611 B [2024-10-26 21:59:32] 2024-10-27 01:57:42,856 | INFO | executing command: df -mP /tmp/boinchome/slots/1 [2024-10-26 21:59:32] 2024-10-27 01:57:42,878 | INFO | sufficient remaining disk space (102069436416 B) [2024-10-26 21:59:32] 2024-10-27 01:57:42,878 | INFO | work directory size check will use 5767168000 B as a max limit (10% grace limit added) [2024-10-26 21:59:32] 2024-10-27 01:57:42,881 | INFO | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6379826975: 84341014 B (within 5767168000 B limit) [2024-10-26 21:59:32] 2024-10-27 01:57:42,881 | INFO | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6379826975/HITS.41780302._000999.pool.root.1 does not exist (skip from workdir size calculation) [2024-10-26 21:59:32] 2024-10-27 01:57:42,881 | INFO | total size of present files: 0 B (workdir size: 84341014 B) [2024-10-26 21:59:32] 2024-10-27 01:57:42,881 | INFO | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/HITS.41780302._000999.pool.root.1 since it does not exist [2024-10-26 21:59:32] 2024-10-27 01:57:43,259 | INFO | number of running child processes to parent process 64439: 7 [2024-10-26 21:59:32] 2024-10-27 01:57:43,259 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:57:45,764 | INFO | monitor loop #679: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:57:56,069 | INFO | (instant) CPU consumption time for pid=64439: 14492.14 (rounded to 14492) [2024-10-26 21:59:32] 2024-10-27 01:57:56,069 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:57:56,069 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:57:56,073 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:57:56,561 | INFO | number of running child processes to parent process 64439: 7 [2024-10-26 21:59:32] 2024-10-27 01:57:56,566 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:57:59,069 | INFO | monitor loop #680: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:58:03,710 | INFO | running: iteration=160 pid=64439 exit_code=None [2024-10-26 21:59:32] 2024-10-27 01:58:09,687 | INFO | (instant) CPU consumption time for pid=64439: 17103.85 (rounded to 17104) [2024-10-26 21:59:32] 2024-10-27 01:58:09,688 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:58:09,688 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:58:09,691 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:58:10,009 | INFO | number of running child processes to parent process 64439: 6 [2024-10-26 21:59:32] 2024-10-27 01:58:10,009 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:58:12,514 | INFO | monitor loop #681: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:58:13,035 | INFO | 9773s have passed since pilot start [2024-10-26 21:59:32] 2024-10-27 01:58:22,906 | INFO | (instant) CPU consumption time for pid=64439: 19590.61 (rounded to 19591) [2024-10-26 21:59:32] 2024-10-27 01:58:22,907 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:58:22,907 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:58:22,911 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:58:23,138 | INFO | number of running child processes to parent process 64439: 5 [2024-10-26 21:59:32] 2024-10-27 01:58:23,139 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:58:25,644 | INFO | monitor loop #682: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:58:35,958 | INFO | (instant) CPU consumption time for pid=64439: 19592.85 (rounded to 19593) [2024-10-26 21:59:32] 2024-10-27 01:58:35,959 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:58:35,959 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:58:35,962 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:58:36,228 | INFO | number of running child processes to parent process 64439: 5 [2024-10-26 21:59:32] 2024-10-27 01:58:36,229 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:58:38,735 | INFO | monitor loop #683: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:58:49,011 | INFO | (instant) CPU consumption time for pid=64439: 19594.960000000003 (rounded to 19595) [2024-10-26 21:59:32] 2024-10-27 01:58:49,011 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:58:49,011 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:58:49,015 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 1000 [2024-10-26 21:59:32] 2024-10-27 01:58:49,448 | INFO | number of running child processes to parent process 64439: 7 [2024-10-26 21:59:32] 2024-10-27 01:58:49,448 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:58:51,951 | INFO | monitor loop #684: job 0:6379826975 is in state 'running' [2024-10-26 21:59:32] 2024-10-27 01:59:01,205 | CRITICAL | max running time (10000s) minus grace time (180s) has been exceeded - time to abort pilot [2024-10-26 21:59:32] 2024-10-27 01:59:01,206 | INFO | setting REACHED_MAXTIME and graceful stop [2024-10-26 21:59:32] 2024-10-27 01:59:01,206 | INFO | [monitor] control thread has ended [2024-10-26 21:59:32] 2024-10-27 01:59:01,281 | INFO | all payload control threads have been joined [2024-10-26 21:59:32] 2024-10-27 01:59:01,319 | INFO | all data control threads have been joined [2024-10-26 21:59:32] 2024-10-27 01:59:01,803 | INFO | all job control threads have been joined [2024-10-26 21:59:32] 2024-10-27 01:59:02,158 | INFO | breaking -- sending SIGTERM to pid=64439 [2024-10-26 21:59:32] 2024-10-27 01:59:02,159 | INFO | breaking -- sleep 10 s before sending SIGKILL pid=64439 [2024-10-26 21:59:32] 2024-10-27 01:59:02,247 | INFO | (instant) CPU consumption time for pid=64439: 19591.539999999997 (rounded to 19592) [2024-10-26 21:59:32] 2024-10-27 01:59:02,247 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:59:02,248 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:59:02,251 | INFO | neither /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json, nor /tmp/boinchome/slots/1/memory_monitor_summary.json exist [2024-10-26 21:59:32] 2024-10-27 01:59:02,251 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_output.txt (trf name=prmon) [2024-10-26 21:59:32] 2024-10-27 01:59:02,254 | INFO | max memory (maxPSS) used by the payload is within the allowed limit: 2678325 B (2 * maxRSS = 65536000 B, memkillgrace = 100%) [2024-10-26 21:59:32] 2024-10-27 01:59:02,254 | INFO | oom_score(pilot) = 1000, oom_score(payload) = 0 [2024-10-26 21:59:32] 2024-10-27 01:59:02,255 | INFO | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 2428 B [2024-10-26 21:59:32] 2024-10-27 01:59:02,255 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3263468 B [2024-10-26 21:59:32] 2024-10-27 01:59:02,255 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 10123 B [2024-10-26 21:59:32] 2024-10-27 01:59:02,255 | INFO | executing command: df -mP /tmp/boinchome/slots/1 [2024-10-26 21:59:32] 2024-10-27 01:59:02,287 | INFO | [payload] control thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:02,294 | INFO | sufficient remaining disk space (102061047808 B) [2024-10-26 21:59:32] 2024-10-27 01:59:02,294 | INFO | work directory size check will use 5767168000 B as a max limit (10% grace limit added) [2024-10-26 21:59:32] 2024-10-27 01:59:02,297 | INFO | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6379826975: 89517212 B (within 5767168000 B limit) [2024-10-26 21:59:32] 2024-10-27 01:59:02,297 | INFO | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6379826975/HITS.41780302._000999.pool.root.1 does not exist (skip from workdir size calculation) [2024-10-26 21:59:32] 2024-10-27 01:59:02,297 | INFO | total size of present files: 0 B (workdir size: 89517212 B) [2024-10-26 21:59:32] 2024-10-27 01:59:02,297 | INFO | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/HITS.41780302._000999.pool.root.1 since it does not exist [2024-10-26 21:59:32] 2024-10-27 01:59:02,325 | INFO | [data] control thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:02,406 | INFO | [payload] failed_post thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:02,486 | INFO | number of running child processes to parent process 64439: 1 [2024-10-26 21:59:32] 2024-10-27 01:59:02,486 | INFO | maximum number of monitored processes: 1490 [2024-10-26 21:59:32] 2024-10-27 01:59:02,486 | INFO | will abort loop [2024-10-26 21:59:32] 2024-10-27 01:59:02,692 | INFO | [job] retrieve thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:02,791 | WARNING | since job:queue_monitor is responsible for sending job updates, we sleep for 20 s [2024-10-26 21:59:32] 2024-10-27 01:59:02,809 | INFO | [job] control thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:03,148 | INFO | [job] create_data_payload thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:03,267 | INFO | [data] copytool_in thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:03,383 | INFO | [job] validate thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:03,450 | INFO | [payload] validate_post thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:03,492 | INFO | [job] job monitor thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:03,629 | INFO | [payload] validate_pre thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:03,744 | INFO | [data] copytool_out thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:07,361 | INFO | [data] queue_monitor thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:07,845 | INFO | job.realtimelogging is not enabled [2024-10-26 21:59:32] 2024-10-27 01:59:08,851 | INFO | [payload] run_realtimelog thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:12,209 | INFO | [2024-10-26 21:59:32] [2024-10-26 21:59:32] finished pid=64439 exit_code=None state=failed [2024-10-26 21:59:32] [2024-10-26 21:59:32] 2024-10-27 01:59:12,210 | WARNING | detected unset exit_code from wait_graceful - reset to -1 [2024-10-26 21:59:32] 2024-10-27 01:59:12,216 | INFO | using pid=72646 to kill prmon [2024-10-26 21:59:32] 2024-10-27 01:59:12,216 | INFO | stopping utility process 'MemoryMonitor' with signal 10 [2024-10-26 21:59:32] 2024-10-27 01:59:12,216 | INFO | process 72646 no longer exists [2024-10-26 21:59:32] 2024-10-27 01:59:12,217 | INFO | utility process 64442 cleanup finished with status=True [2024-10-26 21:59:32] 2024-10-27 01:59:12,217 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#0/#20) [2024-10-26 21:59:32] 2024-10-27 01:59:15,233 | INFO | copied /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/memory_monitor_summary.json to /tmp/boinchome/slots/1 [2024-10-26 21:59:32] 2024-10-27 01:59:15,233 | INFO | CPU consumption time: 225.57999999999998 s (rounded to 226 s) [2024-10-26 21:59:32] 2024-10-27 01:59:15,238 | WARNING | main payload execution returned non-zero exit code: -1 [2024-10-26 21:59:32] 2024-10-27 01:59:15,242 | INFO | scanning dmesg message for subprocess=73762 for memory errors [2024-10-26 21:59:32] 2024-10-27 01:59:15,242 | INFO | executing command: dmesg|grep 73762 [2024-10-26 21:59:32] 2024-10-27 01:59:15,333 | WARNING | job report does not exist: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/jobReport.json [2024-10-26 21:59:32] 2024-10-27 01:59:15,333 | WARNING | metadata does not exist: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/metadata.xml [2024-10-26 21:59:32] 2024-10-27 01:59:15,333 | WARNING | file does not exist: /tmp/boinchome/slots/1/PanDA_Pilot-6379826975/metadata.xml [2024-10-26 21:59:32] 2024-10-27 01:59:15,333 | INFO | generated guid for lfn=HITS.41780302._000999.pool.root.1: 7E69421C-0C67-4469-89CC-D574B8AE5DE3 [2024-10-26 21:59:32] 2024-10-27 01:59:15,333 | WARNING | aborting payload error diagnosis since an error has already been set: [1315, 1187] [2024-10-26 21:59:32] 2024-10-27 01:59:16,458 | INFO | [payload] execute_payloads thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:16,527 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140642402907968)>', '<ExcThread(queue_monitor, started 140642009192192)>'] [2024-10-26 21:59:32] 2024-10-27 01:59:18,538 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140642402907968)>', '<ExcThread(queue_monitor, started 140642009192192)>'] [2024-10-26 21:59:32] 2024-10-27 01:59:20,550 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140642402907968)>', '<ExcThread(queue_monitor, started 140642009192192)>'] [2024-10-26 21:59:32] 2024-10-27 01:59:22,561 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140642402907968)>', '<ExcThread(queue_monitor, started 140642009192192)>'] [2024-10-26 21:59:32] 2024-10-27 01:59:24,572 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140642402907968)>', '<ExcThread(queue_monitor, started 140642009192192)>'] [2024-10-26 21:59:32] 2024-10-27 01:59:25,909 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140642402907968)>', '<ExcThread(queue_monitor, started 140642009192192)>'] [2024-10-26 21:59:32] 2024-10-27 01:59:25,909 | INFO | [job] queue monitor thread has finished [2024-10-26 21:59:32] 2024-10-27 01:59:26,584 | INFO | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 140642402907968)>']) [2024-10-26 21:59:32] 2024-10-27 01:59:31,610 | INFO | all workflow threads have been joined [2024-10-26 21:59:32] 2024-10-27 01:59:31,611 | INFO | end of generic workflow (traces error code: 0) [2024-10-26 21:59:32] 2024-10-27 01:59:31,611 | INFO | traces error code: 0 [2024-10-26 21:59:32] 2024-10-27 01:59:31,611 | INFO | pilot has finished (exit code=0, shell exit code=0) [2024-10-26 21:59:32] 2024-10-27 01:59:31,744 [wrapper] ==== pilot stdout END ==== [2024-10-26 21:59:32] 2024-10-27 01:59:31,784 [wrapper] ==== wrapper stdout RESUME ==== [2024-10-26 21:59:32] 2024-10-27 01:59:31,790 [wrapper] pilotpid: 35574 [2024-10-26 21:59:32] 2024-10-27 01:59:31,795 [wrapper] Pilot exit status: 0 [2024-10-26 21:59:32] 2024-10-27 01:59:31,896 [wrapper] pandaids: 6379826975 [2024-10-26 21:59:32] 2024-10-27 01:59:31,990 [wrapper] cleanup supervisor_pilot 21489 35575 [2024-10-26 21:59:32] 2024-10-27 01:59:31,996 [wrapper] Test setup, not cleaning [2024-10-26 21:59:32] 2024-10-27 01:59:32,005 [wrapper] ==== wrapper stdout END ==== [2024-10-26 21:59:32] 2024-10-27 01:59:32,007 [wrapper] ==== wrapper stderr END ==== [2024-10-26 21:59:32] 2024-10-27 01:59:32,012 [wrapper] apfmon messages muted [2024-10-26 21:59:32] *** Error codes and diagnostics *** [2024-10-26 21:59:32] *** Listing of results directory *** [2024-10-26 21:59:32] total 352004 [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 486088 Oct 26 18:22 pilot3.tar.gz [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 5653 Oct 26 18:32 queuedata.json [2024-10-26 21:59:32] -rwx------ 1 boincer umatlas 34589 Oct 26 18:33 runpilot2-wrapper.sh [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 100 Oct 26 19:14 wrapper_26015_x86_64-pc-linux-gnu [2024-10-26 21:59:32] -rwxr-xr-x 1 boincer umatlas 7986 Oct 26 19:14 run_atlas [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 105 Oct 26 19:14 job.xml [2024-10-26 21:59:32] -rw-r--r-- 2 boincer umatlas 354101189 Oct 26 19:14 EVNT.41780299._000015.pool.root.1 [2024-10-26 21:59:32] -rw-r--r-- 2 boincer umatlas 17569 Oct 26 19:14 start_atlas.sh [2024-10-26 21:59:32] drwxrwx--x 2 boincer umatlas 4096 Oct 26 19:14 shared [2024-10-26 21:59:32] -rw-r--r-- 2 boincer umatlas 499906 Oct 26 19:14 input.tar.gz [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 0 Oct 26 19:14 boinc_lockfile [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 2856 Oct 26 19:14 pandaJob.out [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 467 Oct 26 19:14 setup.sh.local [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 1022139 Oct 26 19:15 agis_schedconf.cvmfs.json [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 1611897 Oct 26 19:15 agis_ddmendpoints.agis.ALL.json [2024-10-26 21:59:32] drwx------ 4 boincer umatlas 4096 Oct 26 19:15 pilot3 [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 909 Oct 26 21:49 heartbeat.json [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 529 Oct 26 21:54 boinc_task_state.xml [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 6387 Oct 26 21:56 init_data.xml [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 95 Oct 26 21:58 pilot_heartbeat.json [2024-10-26 21:59:32] drwxrwx--- 3 boincer umatlas 4096 Oct 26 21:59 PanDA_Pilot-6379826975 [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 1085 Oct 26 21:59 memory_monitor_summary.json [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 27 Oct 26 21:59 wrapper_checkpoint.txt [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 8192 Oct 26 21:59 boinc_mmap_file [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 822936 Oct 26 21:59 pilotlog.txt [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 839885 Oct 26 21:59 log.41780302._000999.job.log.1 [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 571 Oct 26 21:59 runtime_log [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 849920 Oct 26 21:59 result.tar.gz [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 10745 Oct 26 21:59 runtime_log.err [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 649 Oct 26 21:59 dthKDmKW4O6n9Rq4apOajLDm4fhM0noT9bVorHsSDm7xBLDmOFmEcm.diag [2024-10-26 21:59:32] -rw-r--r-- 1 boincer umatlas 28336 Oct 26 21:59 stderr.txt [2024-10-26 21:59:32] No HITS result produced [2024-10-26 21:59:32] *** Contents of shared directory: *** [2024-10-26 21:59:32] total 347152 [2024-10-26 21:59:32] -rw-r--r-- 2 boincer umatlas 354101189 Oct 26 19:14 ATLAS.root_0 [2024-10-26 21:59:32] -rw-r--r-- 2 boincer umatlas 17569 Oct 26 19:14 start_atlas.sh [2024-10-26 21:59:32] -rw-r--r-- 2 boincer umatlas 499906 Oct 26 19:14 input.tar.gz [2024-10-26 21:59:32] -rw------- 1 boincer umatlas 849920 Oct 26 21:59 result.tar.gz 21:59:34 (23918): run_atlas exited; CPU time 319.021985 21:59:34 (23918): called boinc_finish(0) </stderr_txt> ]]>
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