Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
04:08:35 (1044737): wrapper (7.7.26015): starting
04:08:35 (1044737): wrapper: running run_atlas (--nthreads 12)
[2024-10-22 04:08:35] Arguments: --nthreads 12
[2024-10-22 04:08:35] Threads: 12
[2024-10-22 04:08:35] Checking for CVMFS
[2024-10-22 04:08:36] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-22 04:08:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-22 04:08:36] Running cvmfs_config stat atlas.cern.ch
[2024-10-22 04:08:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-22 04:08:38] 2.11.3.0 559175 18671 174132 138604 1 187 3339153 4096000 11907 130560 0 317750422 99.999 4352581 204 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.181:3128 1
[2024-10-22 04:08:38] CVMFS is ok
[2024-10-22 04:08:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-22 04:08:38] Checking for apptainer binary...
[2024-10-22 04:08:38] apptainer is not installed, using version from CVMFS
[2024-10-22 04:08:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-22 04:08:39] epyc7v12
[2024-10-22 04:08:39] apptainer works
[2024-10-22 04:08:39] Set ATHENA_PROC_NUMBER=12
[2024-10-22 04:08:39] Set ATHENA_CORE_NUMBER=12
[2024-10-22 04:08:40] Starting ATLAS job with PandaID=6374705231
[2024-10-22 04:08:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-22 05:35:12]  *** The last 200 lines of the pilot log: ***
[2024-10-22 05:35:12]  replicas=None
[2024-10-22 05:35:12]  scope=mc23_13p6TeV
[2024-10-22 05:35:12]  status=None
[2024-10-22 05:35:12]  status_code=0
[2024-10-22 05:35:12]  storage_token=
[2024-10-22 05:35:12]  surl=/opt/boinc/instance_homes/boinc_31417/slots/8/PanDA_Pilot-6374705231/log.41690988._073874.job.log.tgz.1
[2024-10-22 05:35:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/95/log.41690988._073874.job.log.tgz.1
[2024-10-22 05:35:12]  workdir=None
[2024-10-22 05:35:12] ]
[2024-10-22 05:35:12] 2024-10-22 05:34:33,111 | INFO     | transferring file log.41690988._073874.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/8/PanDA_Pilot-6374705231/log.41690988._073874.job.log.tgz.1 t
[2024-10-22 05:35:12] 2024-10-22 05:34:33,111 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/8/PanDA_Pilot-6374705231/log.41690988._073874.job.log.tgz.1 /opt/boinc/instance_home
[2024-10-22 05:35:12] 2024-10-22 05:34:33,177 | INFO     | adding to output.list: log.41690988._073874.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/95/log.41690988._073874.job.log.tg
[2024-10-22 05:35:12] 2024-10-22 05:34:33,178 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-22 05:35:12] 2024-10-22 05:34:33,178 | INFO     | summary of transferred files:
[2024-10-22 05:35:12] 2024-10-22 05:34:33,179 | INFO     |  -- lfn=log.41690988._073874.job.log.tgz.1, status_code=0, status=transferred
[2024-10-22 05:35:12] 2024-10-22 05:34:33,179 | INFO     | stage-out finished correctly
[2024-10-22 05:35:12] 2024-10-22 05:34:33,277 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-22 05:35:12] 2024-10-22 05:34:33,845 | INFO     | monitor loop #411: job 0:6374705231 is in state 'finished'
[2024-10-22 05:35:12] 2024-10-22 05:34:33,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 05:35:12] 2024-10-22 05:34:35,085 | INFO     | job 6374705231 has state=finished
[2024-10-22 05:35:12] 2024-10-22 05:34:35,085 | INFO     | preparing for final server update for job 6374705231 in state='finished'
[2024-10-22 05:35:12] 2024-10-22 05:34:35,086 | INFO     | this job has now completed (state=finished)
[2024-10-22 05:35:12] 2024-10-22 05:34:35,086 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-22 05:35:12] 2024-10-22 05:34:35,086 | INFO     | log transfer has been attempted: DONE
[2024-10-22 05:35:12] 2024-10-22 05:34:35,086 | INFO     | job 6374705231 has finished - writing final server update
[2024-10-22 05:35:12] 2024-10-22 05:34:35,086 | INFO     | total number of processed events: 400 (read)
[2024-10-22 05:35:12] 2024-10-22 05:34:35,122 | INFO     | executing command: lscpu
[2024-10-22 05:35:12] 2024-10-22 05:34:35,253 | INFO     | found 64 cores (64 cores per socket, 1 sockets)
[2024-10-22 05:35:12] 2024-10-22 05:34:35,310 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-22 05:35:12] 2024-10-22 05:34:36,353 | INFO     | monitor loop #412: job 0:6374705231 is in state 'finished'
[2024-10-22 05:35:12] 2024-10-22 05:34:36,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 05:35:12] 2024-10-22 05:34:38,861 | INFO     | monitor loop #413: job 0:6374705231 is in state 'finished'
[2024-10-22 05:35:12] 2024-10-22 05:34:38,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 05:35:12] 2024-10-22 05:34:41,364 | INFO     | monitor loop #414: job 0:6374705231 is in state 'finished'
[2024-10-22 05:35:12] 2024-10-22 05:34:41,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 05:35:12] 2024-10-22 05:34:43,873 | INFO     | monitor loop #415: job 0:6374705231 is in state 'finished'
[2024-10-22 05:35:12] 2024-10-22 05:34:43,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 05:35:12] 2024-10-22 05:34:46,376 | INFO     | monitor loop #416: job 0:6374705231 is in state 'finished'
[2024-10-22 05:35:12] 2024-10-22 05:34:46,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 05:35:12] 2024-10-22 05:34:48,877 | INFO     | monitor loop #417: job 0:6374705231 is in state 'finished'
[2024-10-22 05:35:12] 2024-10-22 05:34:48,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 05:35:12] 2024-10-22 05:34:51,118 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-22 05:35:12] 2024-10-22 05:34:51,118 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/8/PanDA_Pilot-6374705231/memory_monitor_summary.json (trf name=prmon)
[2024-10-22 05:35:12] 2024-10-22 05:34:51,119 | INFO     | extracted standard info from prmon json
[2024-10-22 05:35:12] 2024-10-22 05:34:51,119 | INFO     | extracted standard memory fields from prmon json
[2024-10-22 05:35:12] 2024-10-22 05:34:51,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-22 05:35:12] 2024-10-22 05:34:51,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-22 05:35:12] 2024-10-22 05:34:51,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-22 05:35:12] 2024-10-22 05:34:51,121 | INFO     | fitting pss+swap vs Time
[2024-10-22 05:35:12] 2024-10-22 05:34:51,122 | INFO     | model: linear, x: [1729570731.0, 1729570792.0, 1729570853.0, 1729570914.0, 1729570975.0, 1729571036.0, 1729571097.0, 1729571158.0, 1729571219.0, 1729571280.0, 1729
[2024-10-22 05:35:12] 2024-10-22 05:34:51,122 | INFO     | sum of square deviations: 120605052.0
[2024-10-22 05:35:12] 2024-10-22 05:34:51,122 | INFO     | sum of deviations: 10784442906.0
[2024-10-22 05:35:12] 2024-10-22 05:34:51,122 | INFO     | mean x: 1729572927.0
[2024-10-22 05:35:12] 2024-10-22 05:34:51,122 | INFO     | mean y: 2652882.97260274
[2024-10-22 05:35:12] 2024-10-22 05:34:51,122 | INFO     | -- intersect: -154654885700.0281
[2024-10-22 05:35:12] 2024-10-22 05:34:51,122 | INFO     | intersect: -154654885700.0281
[2024-10-22 05:35:12] 2024-10-22 05:34:51,123 | INFO     | chi2: 0.6291057166049078
[2024-10-22 05:35:12] 2024-10-22 05:34:51,123 | INFO     | -- intersect: -154654885700.0281
[2024-10-22 05:35:12] 2024-10-22 05:34:51,123 | INFO     | current memory leak: 89.42 B/s (using 73 data points, chi2=0.63)
[2024-10-22 05:35:12] 2024-10-22 05:34:51,123 | INFO     | ..............................
[2024-10-22 05:35:12] 2024-10-22 05:34:51,123 | INFO     | . Timing measurements:
[2024-10-22 05:35:12] 2024-10-22 05:34:51,123 | INFO     | . get job = 0 s
[2024-10-22 05:35:12] 2024-10-22 05:34:51,123 | INFO     | . initial setup = 4 s
[2024-10-22 05:35:12] 2024-10-22 05:34:51,123 | INFO     | . payload setup = 67 s
[2024-10-22 05:35:12] 2024-10-22 05:34:51,124 | INFO     | . stage-in = 0 s
[2024-10-22 05:35:12] 2024-10-22 05:34:51,124 | INFO     | . payload execution = 4885 s
[2024-10-22 05:35:12] 2024-10-22 05:34:51,124 | INFO     | . stage-out = 1 s
[2024-10-22 05:35:12] 2024-10-22 05:34:51,124 | INFO     | . log creation = 0 s
[2024-10-22 05:35:12] 2024-10-22 05:34:51,124 | INFO     | ..............................
[2024-10-22 05:35:12] 2024-10-22 05:34:51,217 | INFO     | 
[2024-10-22 05:35:12] 2024-10-22 05:34:51,217 | INFO     | job summary report
[2024-10-22 05:35:12] 2024-10-22 05:34:51,217 | INFO     | --------------------------------------------------
[2024-10-22 05:35:12] 2024-10-22 05:34:51,217 | INFO     | PanDA job id: 6374705231
[2024-10-22 05:35:12] 2024-10-22 05:34:51,217 | INFO     | task id: 41690988
[2024-10-22 05:35:12] 2024-10-22 05:34:51,217 | INFO     | errors: (none)
[2024-10-22 05:35:12] 2024-10-22 05:34:51,217 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | pilot state: finished 
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | transexitcode: 0
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | exeerrorcode: 0
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | exeerrordiag: 
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | exitcode: 0
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | exitmsg: OK
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | cpuconsumptiontime: 47001 s
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | nevents: 400
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | neventsw: 0
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | pid: 1112557
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | pgrp: 1112557
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | corecount: 12
[2024-10-22 05:35:12] 2024-10-22 05:34:51,218 | INFO     | event service: False
[2024-10-22 05:35:12] 2024-10-22 05:34:51,219 | INFO     | sizes: {0: 2424006, 1: 2424090, 2: 2424261, 12: 2424289, 23: 2424317, 34: 2424345, 45: 2424501, 52: 2424735, 56: 2424763, 4956: 2450835, 4957: 2460241, 4975: 24603
[2024-10-22 05:35:12] 2024-10-22 05:34:51,219 | INFO     | --------------------------------------------------
[2024-10-22 05:35:12] 2024-10-22 05:34:51,219 | INFO     | 
[2024-10-22 05:35:12] 2024-10-22 05:34:51,219 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/8
[2024-10-22 05:35:12] 2024-10-22 05:34:51,260 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,260 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,260 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,260 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,261 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-22 05:35:12] 2024-10-22 05:34:51,262 | INFO     | job 6374705231 has completed (purged errors)
[2024-10-22 05:35:12] 2024-10-22 05:34:51,262 | INFO     | overall cleanup function is called
[2024-10-22 05:35:12] 2024-10-22 05:34:52,273 | INFO     | --- collectZombieJob: --- 10, [1112557]
[2024-10-22 05:35:12] 2024-10-22 05:34:52,273 | INFO     | zombie collector waiting for pid 1112557
[2024-10-22 05:35:12] 2024-10-22 05:34:52,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-22 05:35:12] 2024-10-22 05:34:52,273 | INFO     | collected zombie processes
[2024-10-22 05:35:12] 2024-10-22 05:34:52,273 | INFO     | will attempt to kill all subprocesses of pid=1112557
[2024-10-22 05:35:12] 2024-10-22 05:34:52,471 | INFO     | process IDs to be killed: [1112557] (in reverse order)
[2024-10-22 05:35:12] 2024-10-22 05:34:52,690 | WARNING  | found no corresponding commands to process id(s)
[2024-10-22 05:35:12] 2024-10-22 05:34:52,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-22 05:35:12] 2024-10-22 05:34:52,707 | INFO     | did not find any defunct processes belonging to 1112557
[2024-10-22 05:35:12] 2024-10-22 05:34:52,721 | INFO     | did not find any defunct processes belonging to 1112557
[2024-10-22 05:35:12] 2024-10-22 05:34:52,722 | INFO     | ready for new job
[2024-10-22 05:35:12] 2024-10-22 05:34:52,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-22 05:35:12] 2024-10-22 05:34:52,723 | INFO     | **************************************
[2024-10-22 05:35:12] 2024-10-22 05:34:52,723 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-22 05:35:12] 2024-10-22 05:34:52,723 | INFO     | **************************************
[2024-10-22 05:35:12] 2024-10-22 05:34:52,723 | INFO     | 
[2024-10-22 05:35:12] 2024-10-22 05:34:52,754 | INFO     | architecture information:
[2024-10-22 05:35:12] 2024-10-22 05:34:52,755 | INFO     | executing command: cat /etc/os-release
[2024-10-22 05:35:12] 2024-10-22 05:34:52,801 | INFO     | cat /etc/os-release:
[2024-10-22 05:35:12] NAME="CentOS Linux"
[2024-10-22 05:35:12] VERSION="7 (Core)"
[2024-10-22 05:35:12] ID="centos"
[2024-10-22 05:35:12] ID_LIKE="rhel fedora"
[2024-10-22 05:35:12] VERSION_ID="7"
[2024-10-22 05:35:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-22 05:35:12] ANSI_COLOR="0;31"
[2024-10-22 05:35:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-22 05:35:12] HOME_URL="https://www.centos.org/"
[2024-10-22 05:35:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-22 05:35:12] 
[2024-10-22 05:35:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-22 05:35:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-22 05:35:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-22 05:35:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-22 05:35:12] 
[2024-10-22 05:35:12] 2024-10-22 05:34:52,802 | INFO     | **************************************
[2024-10-22 05:35:12] 2024-10-22 05:34:53,305 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/8
[2024-10-22 05:35:12] 2024-10-22 05:34:53,357 | INFO     | sufficient remaining disk space (332566364160 B)
[2024-10-22 05:35:12] 2024-10-22 05:34:53,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-22 05:35:12] 2024-10-22 05:34:53,358 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-22 05:35:12] 2024-10-22 05:34:53,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-22 05:35:12] 2024-10-22 05:34:53,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-22 05:35:12] 2024-10-22 05:34:53,359 | INFO     | aborting loop
[2024-10-22 05:35:12] 2024-10-22 05:34:53,473 | INFO     | found 0 job(s) in 20 queues
[2024-10-22 05:35:12] 2024-10-22 05:34:53,473 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-22 05:35:12] 2024-10-22 05:34:53,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-22 05:35:12] 2024-10-22 05:34:53,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-22 05:35:12] 2024-10-22 05:34:53,937 | INFO     | all payload control threads have been joined
[2024-10-22 05:35:12] 2024-10-22 05:34:54,199 | INFO     | all job control threads have been joined
[2024-10-22 05:35:12] 2024-10-22 05:34:54,352 | INFO     | all data control threads have been joined
[2024-10-22 05:35:12] 2024-10-22 05:34:54,361 | INFO     | [job] retrieve thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:54,362 | INFO     | [job] job monitor thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:54,465 | INFO     | [payload] failed_post thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:54,881 | INFO     | [payload] validate_pre thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:54,941 | INFO     | [payload] control thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:55,189 | INFO     | [job] validate thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:55,201 | INFO     | [job] control thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:55,357 | INFO     | [data] control thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:55,621 | INFO     | [payload] execute_payloads thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:55,645 | INFO     | [payload] validate_post thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:55,657 | INFO     | [job] create_data_payload thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:55,677 | INFO     | [data] copytool_in thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:55,817 | INFO     | [data] copytool_out thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:56,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-22 05:35:12] 2024-10-22 05:34:57,225 | INFO     | [job] queue monitor thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:34:57,369 | INFO     | [data] queue_monitor thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:35:03,645 | INFO     | job.realtimelogging is not enabled
[2024-10-22 05:35:12] 2024-10-22 05:35:04,649 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-22 05:35:12] 2024-10-22 05:35:06,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140142700017472)>', '<ExcThread(monitor, started 140141880399616)>']
[2024-10-22 05:35:12] 2024-10-22 05:35:07,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-22 05:35:12] 2024-10-22 05:35:07,541 | INFO     | [monitor] control thread has ended
[2024-10-22 05:35:12] 2024-10-22 05:35:11,713 | INFO     | all workflow threads have been joined
[2024-10-22 05:35:12] 2024-10-22 05:35:11,713 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-22 05:35:12] 2024-10-22 05:35:11,713 | INFO     | traces error code: 0
[2024-10-22 05:35:12] 2024-10-22 05:35:11,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-22 05:35:12] 2024-10-22 05:35:11,855 [wrapper] ==== pilot stdout END ====
[2024-10-22 05:35:12] 2024-10-22 05:35:11,866 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-22 05:35:12] 2024-10-22 05:35:11,879 [wrapper] pilotpid: 1061801
[2024-10-22 05:35:12] 2024-10-22 05:35:11,895 [wrapper] Pilot exit status: 0
[2024-10-22 05:35:12] 2024-10-22 05:35:11,926 [wrapper] pandaids: 6374705231
[2024-10-22 05:35:12] 2024-10-22 05:35:12,043 [wrapper] cleanup supervisor_pilot 1276320 1061802
[2024-10-22 05:35:12] 2024-10-22 05:35:12,051 [wrapper] Test setup, not cleaning
[2024-10-22 05:35:12] 2024-10-22 05:35:12,055 [wrapper] ==== wrapper stdout END ====
[2024-10-22 05:35:12] 2024-10-22 05:35:12,059 [wrapper] ==== wrapper stderr END ====
[2024-10-22 05:35:12] 2024-10-22 05:35:12,072 [wrapper] apfmon messages muted
[2024-10-22 05:35:12]  *** Error codes and diagnostics ***
[2024-10-22 05:35:12]     "exeErrorCode": 0,
[2024-10-22 05:35:12]     "exeErrorDiag": "",
[2024-10-22 05:35:12]     "pilotErrorCode": 0,
[2024-10-22 05:35:12]     "pilotErrorDiag": "",
[2024-10-22 05:35:12]  *** Listing of results directory ***
[2024-10-22 05:35:12] total 396760
[2024-10-22 05:35:12] -rw-r--r-- 1 boinc boinc    486088 Oct 22 03:38 pilot3.tar.gz
[2024-10-22 05:35:12] -rwx------ 1 boinc boinc     33946 Oct 22 04:04 runpilot2-wrapper.sh
[2024-10-22 05:35:12] -rw-r--r-- 1 boinc boinc      5654 Oct 22 04:05 queuedata.json
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc       100 Oct 22 04:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-22 05:35:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 04:08 run_atlas
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc       105 Oct 22 04:08 job.xml
[2024-10-22 05:35:12] -rw-r--r-- 2 boinc boinc     17539 Oct 22 04:08 start_atlas.sh
[2024-10-22 05:35:12] drwxrwx--x 2 boinc boinc      4096 Oct 22 04:08 shared
[2024-10-22 05:35:12] -rw-r--r-- 2 boinc boinc    499666 Oct 22 04:08 input.tar.gz
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc      6957 Oct 22 04:08 init_data.xml
[2024-10-22 05:35:12] -rw-r--r-- 2 boinc boinc 226332602 Oct 22 04:08 EVNT.41690986._000971.pool.root.1
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc         0 Oct 22 04:08 boinc_lockfile
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc      2642 Oct 22 04:08 pandaJob.out
[2024-10-22 05:35:12] -rw------- 1 boinc boinc       460 Oct 22 04:08 setup.sh.local
[2024-10-22 05:35:12] -rw------- 1 boinc boinc   1023975 Oct 22 04:10 agis_schedconf.cvmfs.json
[2024-10-22 05:35:12] -rw------- 1 boinc boinc   1608777 Oct 22 04:10 agis_ddmendpoints.agis.ALL.json
[2024-10-22 05:35:12] drwx------ 4 boinc boinc      4096 Oct 22 04:10 pilot3
[2024-10-22 05:35:12] -rw------- 1 boinc boinc 174385369 Oct 22 05:33 HITS.41690988._073874.pool.root.1
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc       530 Oct 22 05:33 boinc_task_state.xml
[2024-10-22 05:35:12] -rw------- 1 boinc boinc        95 Oct 22 05:34 pilot_heartbeat.json
[2024-10-22 05:35:12] -rw------- 1 boinc boinc      1020 Oct 22 05:34 memory_monitor_summary.json
[2024-10-22 05:35:12] -rw------- 1 boinc boinc    361166 Oct 22 05:34 log.41690988._073874.job.log.tgz.1
[2024-10-22 05:35:12] -rw------- 1 boinc boinc      7650 Oct 22 05:34 heartbeat.json
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc      8192 Oct 22 05:35 boinc_mmap_file
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc        27 Oct 22 05:35 wrapper_checkpoint.txt
[2024-10-22 05:35:12] -rw------- 1 boinc boinc      4311 Oct 22 05:35 pilotlog.txt
[2024-10-22 05:35:12] -rw------- 1 boinc boinc    496916 Oct 22 05:35 log.41690988._073874.job.log.1
[2024-10-22 05:35:12] -rw------- 1 boinc boinc       357 Oct 22 05:35 output.list
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc       620 Oct 22 05:35 runtime_log
[2024-10-22 05:35:12] -rw------- 1 boinc boinc    880640 Oct 22 05:35 result.tar.gz
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc     11759 Oct 22 05:35 runtime_log.err
[2024-10-22 05:35:12] -rw------- 1 boinc boinc       640 Oct 22 05:35 cyGODmqJLN6n7OlckoGmwREmGgkVDo1bjSoqOlfODms49KDmiiejOn.diag
[2024-10-22 05:35:12] -rw-rw-r-- 1 boinc boinc     11508 Oct 22 05:35 stderr.txt
[2024-10-22 05:35:12] HITS file was successfully produced:
[2024-10-22 05:35:12] -rw------- 1 boinc boinc 174385369 Oct 22 05:33 shared/HITS.pool.root.1
[2024-10-22 05:35:12]  *** Contents of shared directory: ***
[2024-10-22 05:35:12] total 392704
[2024-10-22 05:35:12] -rw-r--r-- 2 boinc boinc     17539 Oct 22 04:08 start_atlas.sh
[2024-10-22 05:35:12] -rw-r--r-- 2 boinc boinc    499666 Oct 22 04:08 input.tar.gz
[2024-10-22 05:35:12] -rw-r--r-- 2 boinc boinc 226332602 Oct 22 04:08 ATLAS.root_0
[2024-10-22 05:35:12] -rw------- 1 boinc boinc 174385369 Oct 22 05:33 HITS.pool.root.1
[2024-10-22 05:35:12] -rw------- 1 boinc boinc    880640 Oct 22 05:35 result.tar.gz
05:35:14 (1044737): run_atlas exited; CPU time 46918.447241
05:35:14 (1044737): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN