Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
04:07:21 (1037009): wrapper (7.7.26015): starting
04:07:21 (1037009): wrapper: running run_atlas (--nthreads 12)
[2024-10-22 04:07:21] Arguments: --nthreads 12
[2024-10-22 04:07:21] Threads: 12
[2024-10-22 04:07:21] Checking for CVMFS
[2024-10-22 04:07:22] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-22 04:07:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-22 04:07:23] Running cvmfs_config stat atlas.cern.ch
[2024-10-22 04:07:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-22 04:07:25] 2.11.3.0 559175 18670 174096 138604 2 187 3339039 4096000 11872 130560 0 317729145 99.999 4352581 204 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.181:3128 1
[2024-10-22 04:07:25] CVMFS is ok
[2024-10-22 04:07:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-22 04:07:25] Checking for apptainer binary...
[2024-10-22 04:07:25] apptainer is not installed, using version from CVMFS
[2024-10-22 04:07:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-22 04:07:26] epyc7v12
[2024-10-22 04:07:26] apptainer works
[2024-10-22 04:07:26] Set ATHENA_PROC_NUMBER=12
[2024-10-22 04:07:26] Set ATHENA_CORE_NUMBER=12
[2024-10-22 04:07:26] Starting ATLAS job with PandaID=6374705226
[2024-10-22 04:07:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-22 05:50:27]  *** The last 200 lines of the pilot log: ***
[2024-10-22 05:50:27]  direct_access_lan=False
[2024-10-22 05:50:27]  direct_access_wan=False
[2024-10-22 05:50:27]  domain=
[2024-10-22 05:50:27]  filesize=373397
[2024-10-22 05:50:27]  filetype=log
[2024-10-22 05:50:27]  guid=e3941a83-2e96-4621-b7a2-fb5686bcd020
[2024-10-22 05:50:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-10-22 05:50:27]  is_altstaged=None
[2024-10-22 05:50:27]  is_tar=False
[2024-10-22 05:50:27]  lfn=log.41621636._012444.job.log.tgz.1
[2024-10-22 05:50:27]  mtime=0
[2024-10-22 05:50:27]  protocol_id=None
[2024-10-22 05:50:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-22 05:50:27]  replicas=None
[2024-10-22 05:50:27]  scope=mc23_5p36TeV
[2024-10-22 05:50:27]  status=None
[2024-10-22 05:50:27]  status_code=0
[2024-10-22 05:50:27]  storage_token=
[2024-10-22 05:50:27]  surl=/opt/boinc/instance_homes/boinc_31417/slots/7/PanDA_Pilot-6374705226/log.41621636._012444.job.log.tgz.1
[2024-10-22 05:50:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_5p36TeV/b1/5a/log.41621636._012444.job.log.tgz.1
[2024-10-22 05:50:27]  workdir=None
[2024-10-22 05:50:27] ]
[2024-10-22 05:50:27] 2024-10-22 05:50:05,877 | INFO     | transferring file log.41621636._012444.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/7/PanDA_Pilot-6374705226/log.41621636._012444.job.log.tgz.1 t
[2024-10-22 05:50:27] 2024-10-22 05:50:05,877 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/7/PanDA_Pilot-6374705226/log.41621636._012444.job.log.tgz.1 /opt/boinc/instance_home
[2024-10-22 05:50:27] 2024-10-22 05:50:05,905 | INFO     | adding to output.list: log.41621636._012444.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_5p36TeV/b1/5a/log.41621636._012444.job.log.tg
[2024-10-22 05:50:27] 2024-10-22 05:50:05,906 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-22 05:50:27] 2024-10-22 05:50:05,906 | INFO     | summary of transferred files:
[2024-10-22 05:50:27] 2024-10-22 05:50:05,906 | INFO     |  -- lfn=log.41621636._012444.job.log.tgz.1, status_code=0, status=transferred
[2024-10-22 05:50:27] 2024-10-22 05:50:05,906 | INFO     | stage-out finished correctly
[2024-10-22 05:50:27] 2024-10-22 05:50:06,370 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-22 05:50:27] 2024-10-22 05:50:06,459 | INFO     | job 6374705226 has state=finished
[2024-10-22 05:50:27] 2024-10-22 05:50:06,459 | INFO     | preparing for final server update for job 6374705226 in state='finished'
[2024-10-22 05:50:27] 2024-10-22 05:50:06,460 | INFO     | this job has now completed (state=finished)
[2024-10-22 05:50:27] 2024-10-22 05:50:06,460 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-22 05:50:27] 2024-10-22 05:50:06,460 | INFO     | log transfer has been attempted: DONE
[2024-10-22 05:50:27] 2024-10-22 05:50:06,460 | INFO     | job 6374705226 has finished - writing final server update
[2024-10-22 05:50:27] 2024-10-22 05:50:06,460 | INFO     | total number of processed events: 400 (read)
[2024-10-22 05:50:27] 2024-10-22 05:50:06,486 | INFO     | executing command: lscpu
[2024-10-22 05:50:27] 2024-10-22 05:50:06,569 | INFO     | found 64 cores (64 cores per socket, 1 sockets)
[2024-10-22 05:50:27] 2024-10-22 05:50:06,606 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-22 05:50:27] 2024-10-22 05:50:14,451 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-22 05:50:27] 2024-10-22 05:50:14,451 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/7/PanDA_Pilot-6374705226/memory_monitor_summary.json (trf name=prmon)
[2024-10-22 05:50:27] 2024-10-22 05:50:14,452 | INFO     | extracted standard info from prmon json
[2024-10-22 05:50:27] 2024-10-22 05:50:14,452 | INFO     | extracted standard memory fields from prmon json
[2024-10-22 05:50:27] 2024-10-22 05:50:14,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-22 05:50:27] 2024-10-22 05:50:14,453 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-22 05:50:27] 2024-10-22 05:50:14,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-22 05:50:27] 2024-10-22 05:50:14,455 | INFO     | fitting pss+swap vs Time
[2024-10-22 05:50:27] 2024-10-22 05:50:14,455 | INFO     | model: linear, x: [1729570668.0, 1729570729.0, 1729570790.0, 1729570851.0, 1729570912.0, 1729570973.0, 1729571034.0, 1729571095.0, 1729571156.0, 1729571217.0, 1729
[2024-10-22 05:50:27] 2024-10-22 05:50:14,455 | INFO     | sum of square deviations: 218571540.0
[2024-10-22 05:50:27] 2024-10-22 05:50:14,455 | INFO     | sum of deviations: 18845340671.000004
[2024-10-22 05:50:27] 2024-10-22 05:50:14,456 | INFO     | mean x: 1729573352.0
[2024-10-22 05:50:27] 2024-10-22 05:50:14,456 | INFO     | mean y: 2614641.775280899
[2024-10-22 05:50:27] 2024-10-22 05:50:14,456 | INFO     | -- intersect: -149122010796.30054
[2024-10-22 05:50:27] 2024-10-22 05:50:14,456 | INFO     | intersect: -149122010796.30054
[2024-10-22 05:50:27] 2024-10-22 05:50:14,456 | INFO     | chi2: 0.9733571769404077
[2024-10-22 05:50:27] 2024-10-22 05:50:14,456 | INFO     | -- intersect: -149122010796.30054
[2024-10-22 05:50:27] 2024-10-22 05:50:14,456 | INFO     | current memory leak: 86.22 B/s (using 89 data points, chi2=0.97)
[2024-10-22 05:50:27] 2024-10-22 05:50:14,457 | INFO     | ..............................
[2024-10-22 05:50:27] 2024-10-22 05:50:14,457 | INFO     | . Timing measurements:
[2024-10-22 05:50:27] 2024-10-22 05:50:14,457 | INFO     | . get job = 0 s
[2024-10-22 05:50:27] 2024-10-22 05:50:14,457 | INFO     | . initial setup = 7 s
[2024-10-22 05:50:27] 2024-10-22 05:50:14,462 | INFO     | . payload setup = 66 s
[2024-10-22 05:50:27] 2024-10-22 05:50:14,462 | INFO     | . stage-in = 0 s
[2024-10-22 05:50:27] 2024-10-22 05:50:14,462 | INFO     | . payload execution = 5888 s
[2024-10-22 05:50:27] 2024-10-22 05:50:14,463 | INFO     | . stage-out = 0 s
[2024-10-22 05:50:27] 2024-10-22 05:50:14,463 | INFO     | . log creation = 0 s
[2024-10-22 05:50:27] 2024-10-22 05:50:14,463 | INFO     | ..............................
[2024-10-22 05:50:27] 2024-10-22 05:50:14,565 | INFO     | 
[2024-10-22 05:50:27] 2024-10-22 05:50:14,565 | INFO     | job summary report
[2024-10-22 05:50:27] 2024-10-22 05:50:14,565 | INFO     | --------------------------------------------------
[2024-10-22 05:50:27] 2024-10-22 05:50:14,565 | INFO     | PanDA job id: 6374705226
[2024-10-22 05:50:27] 2024-10-22 05:50:14,565 | INFO     | task id: 41621636
[2024-10-22 05:50:27] 2024-10-22 05:50:14,565 | INFO     | errors: (none)
[2024-10-22 05:50:27] 2024-10-22 05:50:14,565 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | pilot state: finished 
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | transexitcode: 0
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | exeerrorcode: 0
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | exeerrordiag: 
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | exitcode: 0
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | exitmsg: OK
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | cpuconsumptiontime: 58388 s
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | nevents: 400
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | neventsw: 0
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | pid: 1089998
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | pgrp: 1089998
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | corecount: 12
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | event service: False
[2024-10-22 05:50:27] 2024-10-22 05:50:14,566 | INFO     | sizes: {0: 2423896, 1: 2424151, 2: 2424179, 13: 2424179, 24: 2424235, 34: 2424263, 45: 2424419, 46: 2424653, 56: 2424681, 5958: 2451178, 5960: 2460584, 5968: 24606
[2024-10-22 05:50:27] 2024-10-22 05:50:14,567 | INFO     | --------------------------------------------------
[2024-10-22 05:50:27] 2024-10-22 05:50:14,567 | INFO     | 
[2024-10-22 05:50:27] 2024-10-22 05:50:14,567 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/7
[2024-10-22 05:50:27] 2024-10-22 05:50:14,597 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,597 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,597 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,597 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,598 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-22 05:50:27] 2024-10-22 05:50:14,599 | INFO     | job 6374705226 has completed (purged errors)
[2024-10-22 05:50:27] 2024-10-22 05:50:14,599 | INFO     | overall cleanup function is called
[2024-10-22 05:50:27] 2024-10-22 05:50:14,625 | WARNING  | process 1089998 is no longer using CPU - aborting
[2024-10-22 05:50:27] 2024-10-22 05:50:14,625 | INFO     | aborting job monitoring since job object (job id=6374705226) has expired
[2024-10-22 05:50:27] 2024-10-22 05:50:15,605 | INFO     | --- collectZombieJob: --- 10, [1089998]
[2024-10-22 05:50:27] 2024-10-22 05:50:15,605 | INFO     | zombie collector waiting for pid 1089998
[2024-10-22 05:50:27] 2024-10-22 05:50:15,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-22 05:50:27] 2024-10-22 05:50:15,606 | INFO     | collected zombie processes
[2024-10-22 05:50:27] 2024-10-22 05:50:15,606 | INFO     | will attempt to kill all subprocesses of pid=1089998
[2024-10-22 05:50:27] 2024-10-22 05:50:15,762 | INFO     | process IDs to be killed: [1089998] (in reverse order)
[2024-10-22 05:50:27] 2024-10-22 05:50:15,921 | WARNING  | get_process_commands() threw an exception: list index out of range
[2024-10-22 05:50:27] 2024-10-22 05:50:15,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-22 05:50:27] 2024-10-22 05:50:15,935 | INFO     | did not find any defunct processes belonging to 1089998
[2024-10-22 05:50:27] 2024-10-22 05:50:15,948 | INFO     | did not find any defunct processes belonging to 1089998
[2024-10-22 05:50:27] 2024-10-22 05:50:15,948 | INFO     | ready for new job
[2024-10-22 05:50:27] 2024-10-22 05:50:15,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-22 05:50:27] 2024-10-22 05:50:15,950 | INFO     | **************************************
[2024-10-22 05:50:27] 2024-10-22 05:50:15,950 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-22 05:50:27] 2024-10-22 05:50:15,950 | INFO     | **************************************
[2024-10-22 05:50:27] 2024-10-22 05:50:15,950 | INFO     | 
[2024-10-22 05:50:27] 2024-10-22 05:50:15,977 | INFO     | architecture information:
[2024-10-22 05:50:27] 2024-10-22 05:50:15,981 | INFO     | executing command: cat /etc/os-release
[2024-10-22 05:50:27] 2024-10-22 05:50:16,002 | INFO     | cat /etc/os-release:
[2024-10-22 05:50:27] NAME="CentOS Linux"
[2024-10-22 05:50:27] VERSION="7 (Core)"
[2024-10-22 05:50:27] ID="centos"
[2024-10-22 05:50:27] ID_LIKE="rhel fedora"
[2024-10-22 05:50:27] VERSION_ID="7"
[2024-10-22 05:50:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-22 05:50:27] ANSI_COLOR="0;31"
[2024-10-22 05:50:27] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-22 05:50:27] HOME_URL="https://www.centos.org/"
[2024-10-22 05:50:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-22 05:50:27] 
[2024-10-22 05:50:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-22 05:50:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-22 05:50:27] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-22 05:50:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-22 05:50:27] 
[2024-10-22 05:50:27] 2024-10-22 05:50:16,003 | INFO     | **************************************
[2024-10-22 05:50:27] 2024-10-22 05:50:16,505 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/7
[2024-10-22 05:50:27] 2024-10-22 05:50:16,526 | INFO     | sufficient remaining disk space (334866939904 B)
[2024-10-22 05:50:27] 2024-10-22 05:50:16,526 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-22 05:50:27] 2024-10-22 05:50:16,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-22 05:50:27] 2024-10-22 05:50:16,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-22 05:50:27] 2024-10-22 05:50:16,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-22 05:50:27] 2024-10-22 05:50:16,527 | INFO     | aborting loop
[2024-10-22 05:50:27] 2024-10-22 05:50:16,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-22 05:50:27] 2024-10-22 05:50:16,901 | INFO     | all data control threads have been joined
[2024-10-22 05:50:27] 2024-10-22 05:50:16,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-22 05:50:27] 2024-10-22 05:50:17,437 | INFO     | all payload control threads have been joined
[2024-10-22 05:50:27] 2024-10-22 05:50:17,525 | INFO     | found 0 job(s) in 20 queues
[2024-10-22 05:50:27] 2024-10-22 05:50:17,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-22 05:50:27] 2024-10-22 05:50:17,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-22 05:50:27] 2024-10-22 05:50:17,532 | INFO     | [job] job monitor thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:17,532 | INFO     | [job] retrieve thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:17,533 | INFO     | [job] queue monitor thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:17,605 | INFO     | [payload] execute_payloads thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:17,625 | INFO     | [job] create_data_payload thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:17,692 | INFO     | all job control threads have been joined
[2024-10-22 05:50:27] 2024-10-22 05:50:17,905 | INFO     | [data] control thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:18,021 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:18,097 | INFO     | [job] validate thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:18,405 | INFO     | [data] copytool_in thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:18,441 | INFO     | [payload] control thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:18,517 | INFO     | [payload] validate_post thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:18,529 | INFO     | [data] copytool_out thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:18,677 | INFO     | [payload] validate_pre thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:18,697 | INFO     | [job] control thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:19,117 | INFO     | [payload] failed_post thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:20,985 | INFO     | [data] queue_monitor thread has finished
[2024-10-22 05:50:27] 2024-10-22 05:50:21,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005894285120)>', '<ExcThread(monitor, started 140005322254080)>']
[2024-10-22 05:50:27] 2024-10-22 05:50:22,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-22 05:50:27] 2024-10-22 05:50:22,545 | INFO     | [monitor] control thread has ended
[2024-10-22 05:50:27] 2024-10-22 05:50:26,933 | INFO     | all workflow threads have been joined
[2024-10-22 05:50:27] 2024-10-22 05:50:26,933 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-22 05:50:27] 2024-10-22 05:50:26,933 | INFO     | traces error code: 0
[2024-10-22 05:50:27] 2024-10-22 05:50:26,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-22 05:50:27] 2024-10-22 05:50:27,041 [wrapper] ==== pilot stdout END ====
[2024-10-22 05:50:27] 2024-10-22 05:50:27,044 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-22 05:50:27] 2024-10-22 05:50:27,047 [wrapper] pilotpid: 1047500
[2024-10-22 05:50:27] 2024-10-22 05:50:27,051 [wrapper] Pilot exit status: 0
[2024-10-22 05:50:27] 2024-10-22 05:50:27,063 [wrapper] pandaids: 6374705226
[2024-10-22 05:50:27] 2024-10-22 05:50:27,155 [wrapper] cleanup supervisor_pilot 1285468 1047501
[2024-10-22 05:50:27] 2024-10-22 05:50:27,158 [wrapper] Test setup, not cleaning
[2024-10-22 05:50:27] 2024-10-22 05:50:27,161 [wrapper] ==== wrapper stdout END ====
[2024-10-22 05:50:27] 2024-10-22 05:50:27,167 [wrapper] ==== wrapper stderr END ====
[2024-10-22 05:50:27] 2024-10-22 05:50:27,173 [wrapper] apfmon messages muted
[2024-10-22 05:50:27]  *** Error codes and diagnostics ***
[2024-10-22 05:50:27]     "exeErrorCode": 0,
[2024-10-22 05:50:27]     "exeErrorDiag": "",
[2024-10-22 05:50:27]     "pilotErrorCode": 0,
[2024-10-22 05:50:27]     "pilotErrorDiag": "",
[2024-10-22 05:50:27]  *** Listing of results directory ***
[2024-10-22 05:50:27] total 400448
[2024-10-22 05:50:27] -rw-r--r-- 1 boinc boinc    486088 Oct 22 03:38 pilot3.tar.gz
[2024-10-22 05:50:27] -rwx------ 1 boinc boinc     33946 Oct 22 04:04 runpilot2-wrapper.sh
[2024-10-22 05:50:27] -rw-r--r-- 1 boinc boinc      5654 Oct 22 04:05 queuedata.json
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc       100 Oct 22 04:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-22 05:50:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 04:07 run_atlas
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc       105 Oct 22 04:07 job.xml
[2024-10-22 05:50:27] -rw-r--r-- 2 boinc boinc     17539 Oct 22 04:07 start_atlas.sh
[2024-10-22 05:50:27] drwxrwx--x 2 boinc boinc      4096 Oct 22 04:07 shared
[2024-10-22 05:50:27] -rw-r--r-- 2 boinc boinc    499640 Oct 22 04:07 input.tar.gz
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc      6957 Oct 22 04:07 init_data.xml
[2024-10-22 05:50:27] -rw-r--r-- 2 boinc boinc 192015412 Oct 22 04:07 EVNT.41621634._000085.pool.root.1
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc         0 Oct 22 04:07 boinc_lockfile
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc      2549 Oct 22 04:07 pandaJob.out
[2024-10-22 05:50:27] -rw------- 1 boinc boinc       460 Oct 22 04:07 setup.sh.local
[2024-10-22 05:50:27] -rw------- 1 boinc boinc   1023975 Oct 22 04:08 agis_schedconf.cvmfs.json
[2024-10-22 05:50:27] -rw------- 1 boinc boinc   1608777 Oct 22 04:08 agis_ddmendpoints.agis.ALL.json
[2024-10-22 05:50:27] drwx------ 4 boinc boinc      4096 Oct 22 04:09 pilot3
[2024-10-22 05:50:27] -rw------- 1 boinc boinc 212260155 Oct 22 05:49 HITS.41621636._012444.pool.root.1
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc       530 Oct 22 05:49 boinc_task_state.xml
[2024-10-22 05:50:27] -rw------- 1 boinc boinc      1019 Oct 22 05:50 memory_monitor_summary.json
[2024-10-22 05:50:27] -rw------- 1 boinc boinc    373397 Oct 22 05:50 log.41621636._012444.job.log.tgz.1
[2024-10-22 05:50:27] -rw------- 1 boinc boinc        95 Oct 22 05:50 pilot_heartbeat.json
[2024-10-22 05:50:27] -rw------- 1 boinc boinc      7644 Oct 22 05:50 heartbeat.json
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc      8192 Oct 22 05:50 boinc_mmap_file
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc        27 Oct 22 05:50 wrapper_checkpoint.txt
[2024-10-22 05:50:27] -rw------- 1 boinc boinc      4239 Oct 22 05:50 pilotlog.txt
[2024-10-22 05:50:27] -rw------- 1 boinc boinc    587697 Oct 22 05:50 log.41621636._012444.job.log.1
[2024-10-22 05:50:27] -rw------- 1 boinc boinc       357 Oct 22 05:50 output.list
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc       620 Oct 22 05:50 runtime_log
[2024-10-22 05:50:27] -rw------- 1 boinc boinc    983040 Oct 22 05:50 result.tar.gz
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc     11759 Oct 22 05:50 runtime_log.err
[2024-10-22 05:50:27] -rw------- 1 boinc boinc       640 Oct 22 05:50 6n4NDmqJLN6n7OlckoGmwREmGgkVDo1bjSoqOlfODmp49KDm8QM5dn.diag
[2024-10-22 05:50:27] -rw-rw-r-- 1 boinc boinc     20916 Oct 22 05:50 stderr.txt
[2024-10-22 05:50:27] HITS file was successfully produced:
[2024-10-22 05:50:27] -rw------- 1 boinc boinc 212260155 Oct 22 05:49 shared/HITS.pool.root.1
[2024-10-22 05:50:27]  *** Contents of shared directory: ***
[2024-10-22 05:50:27] total 396280
[2024-10-22 05:50:27] -rw-r--r-- 2 boinc boinc     17539 Oct 22 04:07 start_atlas.sh
[2024-10-22 05:50:27] -rw-r--r-- 2 boinc boinc    499640 Oct 22 04:07 input.tar.gz
[2024-10-22 05:50:27] -rw-r--r-- 2 boinc boinc 192015412 Oct 22 04:07 ATLAS.root_0
[2024-10-22 05:50:27] -rw------- 1 boinc boinc 212260155 Oct 22 05:49 HITS.pool.root.1
[2024-10-22 05:50:27] -rw------- 1 boinc boinc    983040 Oct 22 05:50 result.tar.gz
05:50:28 (1037009): run_atlas exited; CPU time 58283.120392
05:50:28 (1037009): called boinc_finish(0)

</stderr_txt>
]]>

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