Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
03:31:26 (909147): wrapper (7.7.26015): starting
03:31:26 (909147): wrapper: running run_atlas (--nthreads 12)
[2024-10-22 03:31:26] Arguments: --nthreads 12
[2024-10-22 03:31:26] Threads: 12
[2024-10-22 03:31:26] Checking for CVMFS
[2024-10-22 03:31:27] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-22 03:31:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-22 03:31:28] Running cvmfs_config stat atlas.cern.ch
[2024-10-22 03:31:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-22 03:31:30] 2.11.3.0 559175 18634 174028 138604 2 187 3338907 4096000 15654 130560 0 317265161 99.999 4352576 204 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.181:3128 1
[2024-10-22 03:31:30] CVMFS is ok
[2024-10-22 03:31:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-22 03:31:30] Checking for apptainer binary...
[2024-10-22 03:31:30] apptainer is not installed, using version from CVMFS
[2024-10-22 03:31:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-22 03:31:31] epyc7v12
[2024-10-22 03:31:31] apptainer works
[2024-10-22 03:31:31] Set ATHENA_PROC_NUMBER=12
[2024-10-22 03:31:31] Set ATHENA_CORE_NUMBER=12
[2024-10-22 03:31:31] Starting ATLAS job with PandaID=6374612786
[2024-10-22 03:31:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-22 04:45:04]  *** The last 200 lines of the pilot log: ***
[2024-10-22 04:45:04]  filesize=345049
[2024-10-22 04:45:04]  filetype=log
[2024-10-22 04:45:04]  guid=eac22a44-d306-40fb-be8b-da52de5f99b4
[2024-10-22 04:45:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-10-22 04:45:04]  is_altstaged=None
[2024-10-22 04:45:04]  is_tar=False
[2024-10-22 04:45:04]  lfn=log.41079388._000774.job.log.tgz.1
[2024-10-22 04:45:04]  mtime=0
[2024-10-22 04:45:04]  protocol_id=None
[2024-10-22 04:45:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-22 04:45:04]  replicas=None
[2024-10-22 04:45:04]  scope=mc23_13p6TeV
[2024-10-22 04:45:04]  status=None
[2024-10-22 04:45:04]  status_code=0
[2024-10-22 04:45:04]  storage_token=
[2024-10-22 04:45:04]  surl=/opt/boinc/instance_homes/boinc_31417/slots/13/PanDA_Pilot-6374612786/log.41079388._000774.job.log.tgz.1
[2024-10-22 04:45:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/d2/log.41079388._000774.job.log.tgz.1
[2024-10-22 04:45:04]  workdir=None
[2024-10-22 04:45:04] ]
[2024-10-22 04:45:04] 2024-10-22 04:44:36,269 | INFO     | transferring file log.41079388._000774.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/13/PanDA_Pilot-6374612786/log.41079388._000774.job.log.tgz.1 
[2024-10-22 04:45:04] 2024-10-22 04:44:36,270 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/13/PanDA_Pilot-6374612786/log.41079388._000774.job.log.tgz.1 /opt/boinc/instance_hom
[2024-10-22 04:45:04] 2024-10-22 04:44:36,295 | INFO     | adding to output.list: log.41079388._000774.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/d2/log.41079388._000774.job.log.tg
[2024-10-22 04:45:04] 2024-10-22 04:44:36,296 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-22 04:45:04] 2024-10-22 04:44:36,296 | INFO     | summary of transferred files:
[2024-10-22 04:45:04] 2024-10-22 04:44:36,296 | INFO     |  -- lfn=log.41079388._000774.job.log.tgz.1, status_code=0, status=transferred
[2024-10-22 04:45:04] 2024-10-22 04:44:36,296 | INFO     | stage-out finished correctly
[2024-10-22 04:45:04] 2024-10-22 04:44:38,319 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-22 04:45:04] 2024-10-22 04:44:39,262 | INFO     | job 6374612786 has state=finished
[2024-10-22 04:45:04] 2024-10-22 04:44:39,262 | INFO     | preparing for final server update for job 6374612786 in state='finished'
[2024-10-22 04:45:04] 2024-10-22 04:44:39,975 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-10-22 04:45:04] 2024-10-22 04:44:39,976 | INFO     | this job has now completed (state=finished)
[2024-10-22 04:45:04] 2024-10-22 04:44:39,976 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-22 04:45:04] 2024-10-22 04:44:39,976 | INFO     | log transfer has been attempted: DONE
[2024-10-22 04:45:04] 2024-10-22 04:44:39,976 | INFO     | job 6374612786 has finished - writing final server update
[2024-10-22 04:45:04] 2024-10-22 04:44:39,976 | INFO     | total number of processed events: 400 (read)
[2024-10-22 04:45:04] 2024-10-22 04:44:40,004 | INFO     | executing command: lscpu
[2024-10-22 04:45:04] 2024-10-22 04:44:40,070 | WARNING  | process 945710 is no longer using CPU - aborting
[2024-10-22 04:45:04] 2024-10-22 04:44:40,117 | INFO     | found 64 cores (64 cores per socket, 1 sockets)
[2024-10-22 04:45:04] 2024-10-22 04:44:40,174 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-22 04:45:04] 2024-10-22 04:44:42,573 | INFO     | monitor loop #343: job 0:6374612786 is in state 'finished'
[2024-10-22 04:45:04] 2024-10-22 04:44:42,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:45:04] 2024-10-22 04:44:44,949 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-22 04:45:04] 2024-10-22 04:44:44,950 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/13/PanDA_Pilot-6374612786/memory_monitor_summary.json (trf name=prmon)
[2024-10-22 04:45:04] 2024-10-22 04:44:44,951 | INFO     | extracted standard info from prmon json
[2024-10-22 04:45:04] 2024-10-22 04:44:44,951 | INFO     | extracted standard memory fields from prmon json
[2024-10-22 04:45:04] 2024-10-22 04:44:44,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-22 04:45:04] 2024-10-22 04:44:44,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-22 04:45:04] 2024-10-22 04:44:44,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-22 04:45:04] 2024-10-22 04:44:44,953 | INFO     | fitting pss+swap vs Time
[2024-10-22 04:45:04] 2024-10-22 04:44:44,953 | INFO     | model: linear, x: [1729568538.0, 1729568599.0, 1729568660.0, 1729568721.0, 1729568782.0, 1729568843.0, 1729568904.0, 1729568965.0, 1729569026.0, 1729569087.0, 1729
[2024-10-22 04:45:04] 2024-10-22 04:44:44,954 | INFO     | sum of square deviations: 66959395.0
[2024-10-22 04:45:04] 2024-10-22 04:44:44,954 | INFO     | sum of deviations: 14257007230.0
[2024-10-22 04:45:04] 2024-10-22 04:44:44,954 | INFO     | mean x: 1729570337.5
[2024-10-22 04:45:04] 2024-10-22 04:44:44,954 | INFO     | mean y: 2564674.5
[2024-10-22 04:45:04] 2024-10-22 04:44:44,954 | INFO     | -- intersect: -368257883415.43634
[2024-10-22 04:45:04] 2024-10-22 04:44:44,954 | INFO     | intersect: -368257883415.43634
[2024-10-22 04:45:04] 2024-10-22 04:44:44,954 | INFO     | chi2: 1.2785399078801232
[2024-10-22 04:45:04] 2024-10-22 04:44:44,955 | INFO     | -- intersect: -368257883415.43634
[2024-10-22 04:45:04] 2024-10-22 04:44:44,955 | INFO     | current memory leak: 212.92 B/s (using 60 data points, chi2=1.28)
[2024-10-22 04:45:04] 2024-10-22 04:44:44,955 | INFO     | ..............................
[2024-10-22 04:45:04] 2024-10-22 04:44:44,955 | INFO     | . Timing measurements:
[2024-10-22 04:45:04] 2024-10-22 04:44:44,955 | INFO     | . get job = 0 s
[2024-10-22 04:45:04] 2024-10-22 04:44:44,955 | INFO     | . initial setup = 6 s
[2024-10-22 04:45:04] 2024-10-22 04:44:44,955 | INFO     | . payload setup = 68 s
[2024-10-22 04:45:04] 2024-10-22 04:44:44,955 | INFO     | . stage-in = 0 s
[2024-10-22 04:45:04] 2024-10-22 04:44:44,956 | INFO     | . payload execution = 4096 s
[2024-10-22 04:45:04] 2024-10-22 04:44:44,956 | INFO     | . stage-out = 0 s
[2024-10-22 04:45:04] 2024-10-22 04:44:44,956 | INFO     | . log creation = 0 s
[2024-10-22 04:45:04] 2024-10-22 04:44:44,956 | INFO     | ..............................
[2024-10-22 04:45:04] 2024-10-22 04:44:45,029 | INFO     | 
[2024-10-22 04:45:04] 2024-10-22 04:44:45,029 | INFO     | job summary report
[2024-10-22 04:45:04] 2024-10-22 04:44:45,029 | INFO     | --------------------------------------------------
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | PanDA job id: 6374612786
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | task id: 41079388
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | errors: (none)
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | pilot state: finished 
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | transexitcode: 0
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | exeerrorcode: 0
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | exeerrordiag: 
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | exitcode: 0
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | exitmsg: OK
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | cpuconsumptiontime: 31077 s
[2024-10-22 04:45:04] 2024-10-22 04:44:45,030 | INFO     | nevents: 400
[2024-10-22 04:45:04] 2024-10-22 04:44:45,031 | INFO     | neventsw: 0
[2024-10-22 04:45:04] 2024-10-22 04:44:45,031 | INFO     | pid: 945710
[2024-10-22 04:45:04] 2024-10-22 04:44:45,031 | INFO     | pgrp: 945710
[2024-10-22 04:45:04] 2024-10-22 04:44:45,031 | INFO     | corecount: 12
[2024-10-22 04:45:04] 2024-10-22 04:44:45,031 | INFO     | event service: False
[2024-10-22 04:45:04] 2024-10-22 04:44:45,031 | INFO     | sizes: {0: 2422645, 1: 2424034, 2: 2424233, 13: 2424233, 24: 2424289, 35: 2424317, 46: 2424473, 54: 2424707, 56: 2424735, 4168: 2450412, 4169: 2459484, 4171: 24598
[2024-10-22 04:45:04] 2024-10-22 04:44:45,031 | INFO     | --------------------------------------------------
[2024-10-22 04:45:04] 2024-10-22 04:44:45,031 | INFO     | 
[2024-10-22 04:45:04] 2024-10-22 04:44:45,031 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/13
[2024-10-22 04:45:04] 2024-10-22 04:44:45,056 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,057 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,057 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,057 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,059 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-22 04:45:04] 2024-10-22 04:44:45,059 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,059 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-22 04:45:04] 2024-10-22 04:44:45,059 | INFO     | job 6374612786 has completed (purged errors)
[2024-10-22 04:45:04] 2024-10-22 04:44:45,059 | INFO     | overall cleanup function is called
[2024-10-22 04:45:04] 2024-10-22 04:44:46,065 | INFO     | --- collectZombieJob: --- 10, [945710]
[2024-10-22 04:45:04] 2024-10-22 04:44:46,065 | INFO     | zombie collector waiting for pid 945710
[2024-10-22 04:45:04] 2024-10-22 04:44:46,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-22 04:45:04] 2024-10-22 04:44:46,065 | INFO     | collected zombie processes
[2024-10-22 04:45:04] 2024-10-22 04:44:46,066 | INFO     | will attempt to kill all subprocesses of pid=945710
[2024-10-22 04:45:04] 2024-10-22 04:44:46,236 | INFO     | process IDs to be killed: [945710] (in reverse order)
[2024-10-22 04:45:04] 2024-10-22 04:44:46,376 | WARNING  | found no corresponding commands to process id(s)
[2024-10-22 04:45:04] 2024-10-22 04:44:46,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-22 04:45:04] 2024-10-22 04:44:46,390 | INFO     | did not find any defunct processes belonging to 945710
[2024-10-22 04:45:04] 2024-10-22 04:44:46,403 | INFO     | did not find any defunct processes belonging to 945710
[2024-10-22 04:45:04] 2024-10-22 04:44:46,403 | INFO     | ready for new job
[2024-10-22 04:45:04] 2024-10-22 04:44:46,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-22 04:45:04] 2024-10-22 04:44:46,405 | INFO     | **************************************
[2024-10-22 04:45:04] 2024-10-22 04:44:46,405 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-22 04:45:04] 2024-10-22 04:44:46,405 | INFO     | **************************************
[2024-10-22 04:45:04] 2024-10-22 04:44:46,405 | INFO     | 
[2024-10-22 04:45:04] 2024-10-22 04:44:46,434 | INFO     | architecture information:
[2024-10-22 04:45:04] 2024-10-22 04:44:46,435 | INFO     | executing command: cat /etc/os-release
[2024-10-22 04:45:04] 2024-10-22 04:44:46,456 | INFO     | cat /etc/os-release:
[2024-10-22 04:45:04] NAME="CentOS Linux"
[2024-10-22 04:45:04] VERSION="7 (Core)"
[2024-10-22 04:45:04] ID="centos"
[2024-10-22 04:45:04] ID_LIKE="rhel fedora"
[2024-10-22 04:45:04] VERSION_ID="7"
[2024-10-22 04:45:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-22 04:45:04] ANSI_COLOR="0;31"
[2024-10-22 04:45:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-22 04:45:04] HOME_URL="https://www.centos.org/"
[2024-10-22 04:45:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-22 04:45:04] 
[2024-10-22 04:45:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-22 04:45:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-22 04:45:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-22 04:45:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-22 04:45:04] 
[2024-10-22 04:45:04] 2024-10-22 04:44:46,457 | INFO     | **************************************
[2024-10-22 04:45:04] 2024-10-22 04:44:46,960 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/13
[2024-10-22 04:45:04] 2024-10-22 04:44:46,984 | INFO     | sufficient remaining disk space (329457336320 B)
[2024-10-22 04:45:04] 2024-10-22 04:44:46,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-22 04:45:04] 2024-10-22 04:44:46,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-22 04:45:04] 2024-10-22 04:44:46,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-22 04:45:04] 2024-10-22 04:44:46,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-22 04:45:04] 2024-10-22 04:44:46,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-22 04:45:04] 2024-10-22 04:44:46,986 | INFO     | aborting loop
[2024-10-22 04:45:04] 2024-10-22 04:44:47,138 | INFO     | all job control threads have been joined
[2024-10-22 04:45:04] 2024-10-22 04:44:47,839 | INFO     | found 0 job(s) in 20 queues
[2024-10-22 04:45:04] 2024-10-22 04:44:47,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-22 04:45:04] 2024-10-22 04:44:47,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-22 04:45:04] 2024-10-22 04:44:47,858 | INFO     | all data control threads have been joined
[2024-10-22 04:45:04] 2024-10-22 04:44:47,989 | INFO     | [job] retrieve thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:47,991 | INFO     | [job] queue monitor thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:47,992 | INFO     | [job] job monitor thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:48,112 | INFO     | [payload] failed_post thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:48,143 | INFO     | [job] control thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:48,197 | INFO     | all payload control threads have been joined
[2024-10-22 04:45:04] 2024-10-22 04:44:48,301 | INFO     | [payload] validate_pre thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:48,402 | INFO     | [payload] execute_payloads thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:48,864 | INFO     | [data] control thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:48,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-22 04:45:04] 2024-10-22 04:44:48,991 | INFO     | [data] copytool_out thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:49,202 | INFO     | [payload] control thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:49,214 | INFO     | [job] create_data_payload thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:49,303 | INFO     | [payload] validate_post thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:49,421 | INFO     | [job] validate thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:49,426 | INFO     | [data] copytool_in thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:52,931 | INFO     | [data] queue_monitor thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:57,625 | INFO     | job.realtimelogging is not enabled
[2024-10-22 04:45:04] 2024-10-22 04:44:58,629 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-22 04:45:04] 2024-10-22 04:44:58,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083156784960)>', '<ExcThread(monitor, started 140082856019712)>']
[2024-10-22 04:45:04] 2024-10-22 04:44:58,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-22 04:45:04] 2024-10-22 04:44:58,895 | INFO     | [monitor] control thread has ended
[2024-10-22 04:45:04] 2024-10-22 04:45:03,873 | INFO     | all workflow threads have been joined
[2024-10-22 04:45:04] 2024-10-22 04:45:03,873 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-22 04:45:04] 2024-10-22 04:45:03,873 | INFO     | traces error code: 0
[2024-10-22 04:45:04] 2024-10-22 04:45:03,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-22 04:45:04] 2024-10-22 04:45:04,003 [wrapper] ==== pilot stdout END ====
[2024-10-22 04:45:04] 2024-10-22 04:45:04,006 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-22 04:45:04] 2024-10-22 04:45:04,009 [wrapper] pilotpid: 924496
[2024-10-22 04:45:04] 2024-10-22 04:45:04,012 [wrapper] Pilot exit status: 0
[2024-10-22 04:45:04] 2024-10-22 04:45:04,024 [wrapper] pandaids: 6374612786
[2024-10-22 04:45:04] 2024-10-22 04:45:04,116 [wrapper] cleanup supervisor_pilot 1194043 924497
[2024-10-22 04:45:04] 2024-10-22 04:45:04,120 [wrapper] Test setup, not cleaning
[2024-10-22 04:45:04] 2024-10-22 04:45:04,123 [wrapper] ==== wrapper stdout END ====
[2024-10-22 04:45:04] 2024-10-22 04:45:04,126 [wrapper] ==== wrapper stderr END ====
[2024-10-22 04:45:04] 2024-10-22 04:45:04,133 [wrapper] apfmon messages muted
[2024-10-22 04:45:04]  *** Error codes and diagnostics ***
[2024-10-22 04:45:04]     "exeErrorCode": 0,
[2024-10-22 04:45:04]     "exeErrorDiag": "",
[2024-10-22 04:45:04]     "pilotErrorCode": 0,
[2024-10-22 04:45:04]     "pilotErrorDiag": "",
[2024-10-22 04:45:04]  *** Listing of results directory ***
[2024-10-22 04:45:04] total 588040
[2024-10-22 04:45:04] -rw-r--r-- 1 boinc boinc    486088 Oct 22 01:18 pilot3.tar.gz
[2024-10-22 04:45:04] -rwx------ 1 boinc boinc     33946 Oct 22 01:25 runpilot2-wrapper.sh
[2024-10-22 04:45:04] -rw-r--r-- 1 boinc boinc      5654 Oct 22 01:25 queuedata.json
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc       100 Oct 22 03:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-22 04:45:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 03:31 run_atlas
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc       105 Oct 22 03:31 job.xml
[2024-10-22 04:45:04] -rw-r--r-- 2 boinc boinc     17539 Oct 22 03:31 start_atlas.sh
[2024-10-22 04:45:04] drwxrwx--x 2 boinc boinc      4096 Oct 22 03:31 shared
[2024-10-22 04:45:04] -rw-r--r-- 2 boinc boinc    499657 Oct 22 03:31 input.tar.gz
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc      6958 Oct 22 03:31 init_data.xml
[2024-10-22 04:45:04] -rw-r--r-- 2 boinc boinc 440118070 Oct 22 03:31 EVNT.41079386._000007.pool.root.1
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc         0 Oct 22 03:31 boinc_lockfile
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc      2594 Oct 22 03:31 pandaJob.out
[2024-10-22 04:45:04] -rw------- 1 boinc boinc       460 Oct 22 03:31 setup.sh.local
[2024-10-22 04:45:04] -rw------- 1 boinc boinc   1023975 Oct 22 03:33 agis_schedconf.cvmfs.json
[2024-10-22 04:45:04] -rw------- 1 boinc boinc   1608777 Oct 22 03:33 agis_ddmendpoints.agis.ALL.json
[2024-10-22 04:45:04] drwx------ 4 boinc boinc      4096 Oct 22 03:33 pilot3
[2024-10-22 04:45:04] -rw------- 1 boinc boinc 156654857 Oct 22 04:44 HITS.41079388._000774.pool.root.1
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc       531 Oct 22 04:44 boinc_task_state.xml
[2024-10-22 04:45:04] -rw------- 1 boinc boinc      1022 Oct 22 04:44 memory_monitor_summary.json
[2024-10-22 04:45:04] -rw------- 1 boinc boinc        95 Oct 22 04:44 pilot_heartbeat.json
[2024-10-22 04:45:04] -rw------- 1 boinc boinc    345049 Oct 22 04:44 log.41079388._000774.job.log.tgz.1
[2024-10-22 04:45:04] -rw------- 1 boinc boinc      7644 Oct 22 04:44 heartbeat.json
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc        27 Oct 22 04:45 wrapper_checkpoint.txt
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc      8192 Oct 22 04:45 boinc_mmap_file
[2024-10-22 04:45:04] -rw------- 1 boinc boinc      4312 Oct 22 04:45 pilotlog.txt
[2024-10-22 04:45:04] -rw------- 1 boinc boinc    417812 Oct 22 04:45 log.41079388._000774.job.log.1
[2024-10-22 04:45:04] -rw------- 1 boinc boinc       357 Oct 22 04:45 output.list
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc       620 Oct 22 04:45 runtime_log
[2024-10-22 04:45:04] -rw------- 1 boinc boinc    778240 Oct 22 04:45 result.tar.gz
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc     11777 Oct 22 04:45 runtime_log.err
[2024-10-22 04:45:04] -rw------- 1 boinc boinc       640 Oct 22 04:45 5KxMDmxpIN6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmbBWLDmbKyQ0m.diag
[2024-10-22 04:45:04] -rw-rw-r-- 1 boinc boinc     21092 Oct 22 04:45 stderr.txt
[2024-10-22 04:45:04] HITS file was successfully produced:
[2024-10-22 04:45:04] -rw------- 1 boinc boinc 156654857 Oct 22 04:44 shared/HITS.pool.root.1
[2024-10-22 04:45:04]  *** Contents of shared directory: ***
[2024-10-22 04:45:04] total 584064
[2024-10-22 04:45:04] -rw-r--r-- 2 boinc boinc     17539 Oct 22 03:31 start_atlas.sh
[2024-10-22 04:45:04] -rw-r--r-- 2 boinc boinc    499657 Oct 22 03:31 input.tar.gz
[2024-10-22 04:45:04] -rw-r--r-- 2 boinc boinc 440118070 Oct 22 03:31 ATLAS.root_0
[2024-10-22 04:45:04] -rw------- 1 boinc boinc 156654857 Oct 22 04:44 HITS.pool.root.1
[2024-10-22 04:45:04] -rw------- 1 boinc boinc    778240 Oct 22 04:45 result.tar.gz
04:45:05 (909147): run_atlas exited; CPU time 31005.311785
04:45:05 (909147): called boinc_finish(0)

</stderr_txt>
]]>

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