Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
02:46:22 (676179): wrapper (7.7.26015): starting
02:46:22 (676179): wrapper: running run_atlas (--nthreads 12)
[2024-10-22 02:46:22] Arguments: --nthreads 12
[2024-10-22 02:46:22] Threads: 12
[2024-10-22 02:46:22] Checking for CVMFS
[2024-10-22 02:46:23] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-22 02:46:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-22 02:46:24] Running cvmfs_config stat atlas.cern.ch
[2024-10-22 02:46:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-22 02:46:25] 2.11.3.0 559175 18589 173796 138602 3 187 3227660 4096001 15221 130560 0 316479860 99.999 4298341 202 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.181:3128 1
[2024-10-22 02:46:25] CVMFS is ok
[2024-10-22 02:46:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-22 02:46:25] Checking for apptainer binary...
[2024-10-22 02:46:25] apptainer is not installed, using version from CVMFS
[2024-10-22 02:46:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-22 02:46:27] epyc7v12
[2024-10-22 02:46:27] apptainer works
[2024-10-22 02:46:27] Set ATHENA_PROC_NUMBER=12
[2024-10-22 02:46:27] Set ATHENA_CORE_NUMBER=12
[2024-10-22 02:46:27] Starting ATLAS job with PandaID=6374572277
[2024-10-22 02:46:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-22 04:15:37]  *** The last 200 lines of the pilot log: ***
[2024-10-22 04:15:37] 2024-10-22 04:14:33,110 | INFO     | job 6374572277 has finished - writing final server update
[2024-10-22 04:15:37] 2024-10-22 04:14:33,110 | INFO     | total number of processed events: 400 (read)
[2024-10-22 04:15:37] 2024-10-22 04:14:33,129 | INFO     | executing command: lscpu
[2024-10-22 04:15:37] 2024-10-22 04:14:33,330 | INFO     | found 64 cores (64 cores per socket, 1 sockets)
[2024-10-22 04:15:37] 2024-10-22 04:14:33,502 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-22 04:15:37] 2024-10-22 04:14:35,128 | INFO     | monitor loop #402: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:35,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:14:35,153 | INFO     | 5193s have passed since pilot start
[2024-10-22 04:15:37] 2024-10-22 04:14:37,636 | INFO     | monitor loop #403: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:37,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:14:40,140 | INFO     | monitor loop #404: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:40,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:14:42,645 | INFO     | monitor loop #405: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:42,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:14:45,153 | INFO     | monitor loop #406: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:45,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:14:47,665 | INFO     | monitor loop #407: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:47,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:14:50,169 | INFO     | monitor loop #408: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:50,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:14:52,681 | INFO     | monitor loop #409: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:52,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:14:55,193 | INFO     | monitor loop #410: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:55,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:14:57,704 | INFO     | monitor loop #411: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:14:57,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:15:00,213 | INFO     | monitor loop #412: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:15:00,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:15:02,725 | INFO     | monitor loop #413: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:15:02,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:15:05,241 | INFO     | monitor loop #414: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:15:05,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:15:07,749 | INFO     | monitor loop #415: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:15:07,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:15:10,257 | INFO     | monitor loop #416: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:15:10,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:15:12,769 | INFO     | monitor loop #417: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:15:12,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:15:15,280 | INFO     | monitor loop #418: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:15:15,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:15:17,781 | INFO     | monitor loop #419: job 0:6374572277 is in state 'finished'
[2024-10-22 04:15:37] 2024-10-22 04:15:17,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-22 04:15:37] 2024-10-22 04:15:18,121 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-22 04:15:37] 2024-10-22 04:15:18,122 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/4/PanDA_Pilot-6374572277/memory_monitor_summary.json (trf name=prmon)
[2024-10-22 04:15:37] 2024-10-22 04:15:18,123 | INFO     | extracted standard info from prmon json
[2024-10-22 04:15:37] 2024-10-22 04:15:18,123 | INFO     | extracted standard memory fields from prmon json
[2024-10-22 04:15:37] 2024-10-22 04:15:18,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-22 04:15:37] 2024-10-22 04:15:18,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-22 04:15:37] 2024-10-22 04:15:18,124 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-22 04:15:37] 2024-10-22 04:15:18,130 | INFO     | fitting pss+swap vs Time
[2024-10-22 04:15:37] 2024-10-22 04:15:18,130 | INFO     | model: linear, x: [1729565819.0, 1729565880.0, 1729565941.0, 1729566002.0, 1729566063.0, 1729566124.0, 1729566185.0, 1729566246.0, 1729566307.0, 1729566368.0, 1729
[2024-10-22 04:15:37] 2024-10-22 04:15:18,130 | INFO     | sum of square deviations: 130793150.0
[2024-10-22 04:15:37] 2024-10-22 04:15:18,131 | INFO     | sum of deviations: 17923330185.0
[2024-10-22 04:15:37] 2024-10-22 04:15:18,131 | INFO     | mean x: 1729568076.0
[2024-10-22 04:15:37] 2024-10-22 04:15:18,131 | INFO     | mean y: 2565617.1333333333
[2024-10-22 04:15:37] 2024-10-22 04:15:18,131 | INFO     | -- intersect: -237009997377.05386
[2024-10-22 04:15:37] 2024-10-22 04:15:18,131 | INFO     | intersect: -237009997377.05386
[2024-10-22 04:15:37] 2024-10-22 04:15:18,131 | INFO     | chi2: 1.1769171829288967
[2024-10-22 04:15:37] 2024-10-22 04:15:18,132 | INFO     | -- intersect: -237009997377.05386
[2024-10-22 04:15:37] 2024-10-22 04:15:18,132 | INFO     | current memory leak: 137.04 B/s (using 75 data points, chi2=1.18)
[2024-10-22 04:15:37] 2024-10-22 04:15:18,132 | INFO     | ..............................
[2024-10-22 04:15:37] 2024-10-22 04:15:18,132 | INFO     | . Timing measurements:
[2024-10-22 04:15:37] 2024-10-22 04:15:18,132 | INFO     | . get job = 0 s
[2024-10-22 04:15:37] 2024-10-22 04:15:18,133 | INFO     | . initial setup = 4 s
[2024-10-22 04:15:37] 2024-10-22 04:15:18,133 | INFO     | . payload setup = 65 s
[2024-10-22 04:15:37] 2024-10-22 04:15:18,133 | INFO     | . stage-in = 0 s
[2024-10-22 04:15:37] 2024-10-22 04:15:18,137 | INFO     | . payload execution = 5003 s
[2024-10-22 04:15:37] 2024-10-22 04:15:18,137 | INFO     | . stage-out = 2 s
[2024-10-22 04:15:37] 2024-10-22 04:15:18,137 | INFO     | . log creation = 1 s
[2024-10-22 04:15:37] 2024-10-22 04:15:18,137 | INFO     | ..............................
[2024-10-22 04:15:37] 2024-10-22 04:15:18,298 | INFO     | 
[2024-10-22 04:15:37] 2024-10-22 04:15:18,298 | INFO     | job summary report
[2024-10-22 04:15:37] 2024-10-22 04:15:18,298 | INFO     | --------------------------------------------------
[2024-10-22 04:15:37] 2024-10-22 04:15:18,298 | INFO     | PanDA job id: 6374572277
[2024-10-22 04:15:37] 2024-10-22 04:15:18,298 | INFO     | task id: 41079388
[2024-10-22 04:15:37] 2024-10-22 04:15:18,299 | INFO     | errors: (none)
[2024-10-22 04:15:37] 2024-10-22 04:15:18,299 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-22 04:15:37] 2024-10-22 04:15:18,299 | INFO     | pilot state: finished 
[2024-10-22 04:15:37] 2024-10-22 04:15:18,299 | INFO     | transexitcode: 0
[2024-10-22 04:15:37] 2024-10-22 04:15:18,299 | INFO     | exeerrorcode: 0
[2024-10-22 04:15:37] 2024-10-22 04:15:18,299 | INFO     | exeerrordiag: 
[2024-10-22 04:15:37] 2024-10-22 04:15:18,299 | INFO     | exitcode: 0
[2024-10-22 04:15:37] 2024-10-22 04:15:18,299 | INFO     | exitmsg: OK
[2024-10-22 04:15:37] 2024-10-22 04:15:18,299 | INFO     | cpuconsumptiontime: 31912 s
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | nevents: 400
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | neventsw: 0
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | pid: 708066
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | pgrp: 708066
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | corecount: 12
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | event service: False
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | sizes: {0: 2423961, 1: 2424160, 12: 2424160, 23: 2424188, 34: 2424216, 45: 2424244, 52: 2424606, 55: 2424634, 5072: 2450660, 5075: 2459730, 5078: 2459786, 5124: 24
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | --------------------------------------------------
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | 
[2024-10-22 04:15:37] 2024-10-22 04:15:18,300 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/4
[2024-10-22 04:15:37] 2024-10-22 04:15:18,510 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,510 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,510 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,510 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,512 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-22 04:15:37] 2024-10-22 04:15:18,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,512 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-22 04:15:37] 2024-10-22 04:15:18,512 | INFO     | job 6374572277 has completed (purged errors)
[2024-10-22 04:15:37] 2024-10-22 04:15:18,512 | INFO     | overall cleanup function is called
[2024-10-22 04:15:37] 2024-10-22 04:15:19,529 | INFO     | --- collectZombieJob: --- 10, [708066]
[2024-10-22 04:15:37] 2024-10-22 04:15:19,529 | INFO     | zombie collector waiting for pid 708066
[2024-10-22 04:15:37] 2024-10-22 04:15:19,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-22 04:15:37] 2024-10-22 04:15:19,529 | INFO     | collected zombie processes
[2024-10-22 04:15:37] 2024-10-22 04:15:19,530 | INFO     | will attempt to kill all subprocesses of pid=708066
[2024-10-22 04:15:37] 2024-10-22 04:15:19,860 | INFO     | process IDs to be killed: [708066] (in reverse order)
[2024-10-22 04:15:37] 2024-10-22 04:15:20,826 | WARNING  | found no corresponding commands to process id(s)
[2024-10-22 04:15:37] 2024-10-22 04:15:20,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-22 04:15:37] 2024-10-22 04:15:20,861 | INFO     | did not find any defunct processes belonging to 708066
[2024-10-22 04:15:37] 2024-10-22 04:15:20,887 | INFO     | did not find any defunct processes belonging to 708066
[2024-10-22 04:15:37] 2024-10-22 04:15:20,887 | INFO     | ready for new job
[2024-10-22 04:15:37] 2024-10-22 04:15:20,887 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-22 04:15:37] 2024-10-22 04:15:20,889 | INFO     | **************************************
[2024-10-22 04:15:37] 2024-10-22 04:15:20,889 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-10-22 04:15:37] 2024-10-22 04:15:20,889 | INFO     | **************************************
[2024-10-22 04:15:37] 2024-10-22 04:15:20,889 | INFO     | 
[2024-10-22 04:15:37] 2024-10-22 04:15:20,927 | INFO     | architecture information:
[2024-10-22 04:15:37] 2024-10-22 04:15:20,941 | INFO     | executing command: cat /etc/os-release
[2024-10-22 04:15:37] 2024-10-22 04:15:21,090 | INFO     | cat /etc/os-release:
[2024-10-22 04:15:37] NAME="CentOS Linux"
[2024-10-22 04:15:37] VERSION="7 (Core)"
[2024-10-22 04:15:37] ID="centos"
[2024-10-22 04:15:37] ID_LIKE="rhel fedora"
[2024-10-22 04:15:37] VERSION_ID="7"
[2024-10-22 04:15:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-22 04:15:37] ANSI_COLOR="0;31"
[2024-10-22 04:15:37] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-22 04:15:37] HOME_URL="https://www.centos.org/"
[2024-10-22 04:15:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-22 04:15:37] 
[2024-10-22 04:15:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-22 04:15:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-22 04:15:37] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-22 04:15:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-22 04:15:37] 
[2024-10-22 04:15:37] 2024-10-22 04:15:21,090 | INFO     | **************************************
[2024-10-22 04:15:37] 2024-10-22 04:15:21,593 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/4
[2024-10-22 04:15:37] 2024-10-22 04:15:21,753 | INFO     | sufficient remaining disk space (320070483968 B)
[2024-10-22 04:15:37] 2024-10-22 04:15:21,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-22 04:15:37] 2024-10-22 04:15:21,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-22 04:15:37] 2024-10-22 04:15:21,754 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-22 04:15:37] 2024-10-22 04:15:21,754 | INFO     | aborting loop
[2024-10-22 04:15:37] 2024-10-22 04:15:22,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-22 04:15:37] 2024-10-22 04:15:22,389 | INFO     | found 0 job(s) in 20 queues
[2024-10-22 04:15:37] 2024-10-22 04:15:22,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-22 04:15:37] 2024-10-22 04:15:22,389 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-22 04:15:37] 2024-10-22 04:15:22,761 | INFO     | [job] retrieve thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:22,762 | INFO     | [job] job monitor thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:22,837 | INFO     | all data control threads have been joined
[2024-10-22 04:15:37] 2024-10-22 04:15:22,965 | INFO     | all job control threads have been joined
[2024-10-22 04:15:37] 2024-10-22 04:15:23,244 | INFO     | all payload control threads have been joined
[2024-10-22 04:15:37] 2024-10-22 04:15:23,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-22 04:15:37] 2024-10-22 04:15:23,349 | INFO     | [job] validate thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:23,401 | INFO     | [payload] execute_payloads thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:23,537 | INFO     | [job] create_data_payload thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:23,845 | INFO     | [data] control thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:23,905 | INFO     | [payload] validate_pre thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:23,973 | INFO     | [job] control thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:23,974 | INFO     | [data] copytool_in thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:24,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-22 04:15:37] 2024-10-22 04:15:24,101 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:24,124 | INFO     | [payload] validate_post thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:24,213 | INFO     | [payload] failed_post thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:24,253 | INFO     | [payload] control thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:24,313 | INFO     | [data] copytool_out thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:24,333 | INFO     | [job] queue monitor thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:28,021 | INFO     | [data] queue_monitor thread has finished
[2024-10-22 04:15:37] 2024-10-22 04:15:29,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623576999744)>', '<ExcThread(monitor, started 140623293302528)>']
[2024-10-22 04:15:37] 2024-10-22 04:15:30,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-22 04:15:37] 2024-10-22 04:15:30,425 | INFO     | [monitor] control thread has ended
[2024-10-22 04:15:37] 2024-10-22 04:15:34,817 | INFO     | all workflow threads have been joined
[2024-10-22 04:15:37] 2024-10-22 04:15:34,817 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-22 04:15:37] 2024-10-22 04:15:34,818 | INFO     | traces error code: 0
[2024-10-22 04:15:37] 2024-10-22 04:15:34,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-22 04:15:37] 2024-10-22 04:15:35,161 [wrapper] ==== pilot stdout END ====
[2024-10-22 04:15:37] 2024-10-22 04:15:35,201 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-22 04:15:37] 2024-10-22 04:15:35,233 [wrapper] pilotpid: 686875
[2024-10-22 04:15:37] 2024-10-22 04:15:35,281 [wrapper] Pilot exit status: 0
[2024-10-22 04:15:37] 2024-10-22 04:15:35,497 [wrapper] pandaids: 6374572277
[2024-10-22 04:15:37] 2024-10-22 04:15:35,901 [wrapper] cleanup supervisor_pilot 1021894 686876
[2024-10-22 04:15:37] 2024-10-22 04:15:35,949 [wrapper] Test setup, not cleaning
[2024-10-22 04:15:37] 2024-10-22 04:15:35,997 [wrapper] ==== wrapper stdout END ====
[2024-10-22 04:15:37] 2024-10-22 04:15:36,053 [wrapper] ==== wrapper stderr END ====
[2024-10-22 04:15:37] 2024-10-22 04:15:36,169 [wrapper] apfmon messages muted
[2024-10-22 04:15:37]  *** Error codes and diagnostics ***
[2024-10-22 04:15:37]     "exeErrorCode": 0,
[2024-10-22 04:15:37]     "exeErrorDiag": "",
[2024-10-22 04:15:37]     "pilotErrorCode": 0,
[2024-10-22 04:15:37]     "pilotErrorDiag": "",
[2024-10-22 04:15:37]  *** Listing of results directory ***
[2024-10-22 04:15:37] total 588348
[2024-10-22 04:15:37] -rw-r--r-- 1 boinc boinc    486088 Oct 22 00:14 pilot3.tar.gz
[2024-10-22 04:15:37] -rwx------ 1 boinc boinc     33946 Oct 22 00:22 runpilot2-wrapper.sh
[2024-10-22 04:15:37] -rw-r--r-- 1 boinc boinc      5654 Oct 22 00:22 queuedata.json
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc       100 Oct 22 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-22 04:15:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 02:46 run_atlas
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc       105 Oct 22 02:46 job.xml
[2024-10-22 04:15:37] -rw-r--r-- 2 boinc boinc     17539 Oct 22 02:46 start_atlas.sh
[2024-10-22 04:15:37] drwxrwx--x 2 boinc boinc      4096 Oct 22 02:46 shared
[2024-10-22 04:15:37] -rw-r--r-- 2 boinc boinc    499663 Oct 22 02:46 input.tar.gz
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc      6957 Oct 22 02:46 init_data.xml
[2024-10-22 04:15:37] -rw-r--r-- 2 boinc boinc 441556908 Oct 22 02:46 EVNT.41079386._000025.pool.root.1
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc         0 Oct 22 02:46 boinc_lockfile
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc      2598 Oct 22 02:46 pandaJob.out
[2024-10-22 04:15:37] -rw------- 1 boinc boinc       460 Oct 22 02:46 setup.sh.local
[2024-10-22 04:15:37] -rw------- 1 boinc boinc   1023975 Oct 22 02:48 agis_schedconf.cvmfs.json
[2024-10-22 04:15:37] -rw------- 1 boinc boinc   1608777 Oct 22 02:48 agis_ddmendpoints.agis.ALL.json
[2024-10-22 04:15:37] drwx------ 4 boinc boinc      4096 Oct 22 02:48 pilot3
[2024-10-22 04:15:37] -rw------- 1 boinc boinc 155331150 Oct 22 04:13 HITS.41079388._000645.pool.root.1
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc       531 Oct 22 04:13 boinc_task_state.xml
[2024-10-22 04:15:37] -rw------- 1 boinc boinc      1022 Oct 22 04:14 memory_monitor_summary.json
[2024-10-22 04:15:37] -rw------- 1 boinc boinc        95 Oct 22 04:14 pilot_heartbeat.json
[2024-10-22 04:15:37] -rw------- 1 boinc boinc    375313 Oct 22 04:14 log.41079388._000645.job.log.tgz.1
[2024-10-22 04:15:37] -rw------- 1 boinc boinc      7650 Oct 22 04:15 heartbeat.json
[2024-10-22 04:15:37] -rw------- 1 boinc boinc      4239 Oct 22 04:15 pilotlog.txt
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc      8192 Oct 22 04:15 boinc_mmap_file
[2024-10-22 04:15:37] -rw------- 1 boinc boinc    488141 Oct 22 04:15 log.41079388._000645.job.log.1
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc        27 Oct 22 04:15 wrapper_checkpoint.txt
[2024-10-22 04:15:37] -rw------- 1 boinc boinc       357 Oct 22 04:15 output.list
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc       620 Oct 22 04:15 runtime_log
[2024-10-22 04:15:37] -rw------- 1 boinc boinc    880640 Oct 22 04:15 result.tar.gz
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc     11759 Oct 22 04:15 runtime_log.err
[2024-10-22 04:15:37] -rw------- 1 boinc boinc       640 Oct 22 04:15 8s9MDmZqHN6n7OlckoGmwREmGgkVDo1bjSoqOlfODmH19KDmQ5AhPn.diag
[2024-10-22 04:15:37] -rw-rw-r-- 1 boinc boinc     22279 Oct 22 04:15 stderr.txt
[2024-10-22 04:15:37] HITS file was successfully produced:
[2024-10-22 04:15:37] -rw------- 1 boinc boinc 155331150 Oct 22 04:13 shared/HITS.pool.root.1
[2024-10-22 04:15:37]  *** Contents of shared directory: ***
[2024-10-22 04:15:37] total 584276
[2024-10-22 04:15:37] -rw-r--r-- 2 boinc boinc     17539 Oct 22 02:46 start_atlas.sh
[2024-10-22 04:15:37] -rw-r--r-- 2 boinc boinc    499663 Oct 22 02:46 input.tar.gz
[2024-10-22 04:15:37] -rw-r--r-- 2 boinc boinc 441556908 Oct 22 02:46 ATLAS.root_0
[2024-10-22 04:15:37] -rw------- 1 boinc boinc 155331150 Oct 22 04:13 HITS.pool.root.1
[2024-10-22 04:15:37] -rw------- 1 boinc boinc    880640 Oct 22 04:15 result.tar.gz
04:15:39 (676179): run_atlas exited; CPU time 31828.784668
04:15:39 (676179): called boinc_finish(0)

</stderr_txt>
]]>

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