Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-10-21 18:53:57 (9340): Detected: vboxwrapper 26206
2024-10-21 18:53:57 (9340): Detected: BOINC client v8.0.2
2024-10-21 18:53:57 (9340): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2024-10-21 18:53:57 (9340): Successfully copied 'init_data.xml' to the shared directory.
2024-10-21 18:53:58 (9340): Create VM. (boinc_1ec3c320e6d3e7b5, slot#0)
2024-10-21 18:53:58 (9340): Setting Memory Size for VM. (4400MB)
2024-10-21 18:53:59 (9340): Setting CPU Count for VM. (4)
2024-10-21 18:53:59 (9340): Setting Chipset Options for VM.
2024-10-21 18:53:59 (9340): Setting Graphics Controller Options for VM.
2024-10-21 18:53:59 (9340): Setting Boot Options for VM.
2024-10-21 18:54:00 (9340): Setting Network Configuration for NAT.
2024-10-21 18:54:00 (9340): Enabling VM Network Access.
2024-10-21 18:54:00 (9340): Disabling USB Support for VM.
2024-10-21 18:54:00 (9340): Disabling COM Port Support for VM.
2024-10-21 18:54:01 (9340): Disabling LPT Port Support for VM.
2024-10-21 18:54:01 (9340): Disabling Audio Support for VM.
2024-10-21 18:54:01 (9340): Disabling Clipboard Support for VM.
2024-10-21 18:54:01 (9340): Disabling Drag and Drop Support for VM.
2024-10-21 18:54:02 (9340): Adding storage controller(s) to VM.
2024-10-21 18:54:02 (9340): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-10-21 18:54:03 (9340): Adding VirtualBox Guest Additions to VM.
2024-10-21 18:54:03 (9340): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-10-21 18:54:03 (9340): forwarding host port 24401 to guest port 80
2024-10-21 18:54:03 (9340): Enabling remote desktop for VM.
2024-10-21 18:54:04 (9340): Enabling shared directory for VM.
2024-10-21 18:54:05 (9340): Starting VM using VBoxManage interface. (boinc_1ec3c320e6d3e7b5, slot#0)
2024-10-21 18:54:12 (9340): Successfully started VM. (PID = '11168')
2024-10-21 18:54:12 (9340): Reporting VM Process ID to BOINC.
2024-10-21 18:54:12 (9340): Guest Log: BIOS: VirtualBox 7.0.22
2024-10-21 18:54:12 (9340): Guest Log: CPUID EDX: 0x178bfbff
2024-10-21 18:54:12 (9340): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-10-21 18:54:12 (9340): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-10-21 18:54:12 (9340): VM state change detected. (old = 'poweredoff', new = 'running')
2024-10-21 18:54:12 (9340): Detected: Web Application Enabled (http://localhost:24401)
2024-10-21 18:54:12 (9340): Detected: Remote Desktop Enabled (localhost:24402)
2024-10-21 18:54:12 (9340): Preference change detected
2024-10-21 18:54:12 (9340): Setting CPU throttle for VM. (60%)
2024-10-21 18:54:12 (9340): Setting checkpoint interval to 999 seconds. (Higher value of (Preference: 999 seconds) or (Vbox_job.xml: 900 seconds))
2024-10-21 18:54:14 (9340): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-10-21 18:54:14 (9340): Guest Log: BIOS: Booting from Hard Disk...
2024-10-21 18:54:18 (9340): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-10-21 18:54:18 (9340): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-10-21 18:54:18 (9340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-10-21 18:54:27 (9340): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-10-21 18:54:27 (9340): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-10-21 18:54:42 (9340): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-10-21 18:54:42 (9340): Guest Log: 00:00:00.000358 main     Log opened 2024-10-21T18:54:39.771676000Z
2024-10-21 18:54:42 (9340): Guest Log: 00:00:00.000586 main     OS Product: Linux
2024-10-21 18:54:42 (9340): Guest Log: 00:00:00.000632 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-10-21 18:54:42 (9340): Guest Log: 00:00:00.000673 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-10-21 18:54:42 (9340): Guest Log: 00:00:00.000715 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-10-21 18:54:42 (9340): Guest Log: 00:00:00.000717 main     Process ID: 1305
2024-10-21 18:54:42 (9340): Guest Log: 00:00:00.000718 main     Package type: LINUX_64BITS_GENERIC
2024-10-21 18:54:42 (9340): Guest Log: 00:00:00.001884 main     5.2.32 r132073 started. Verbose level = 0
2024-10-21 18:54:42 (9340): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-10-21 18:54:42 (9340): Guest Log: [INFO] Mounting shared directory
2024-10-21 18:54:42 (9340): Guest Log: [INFO] Checking for init_data.xml
2024-10-21 18:54:52 (9340): Guest Log: 00:00:10.008802 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 187 402 000ns (GuestNow=1 729 529 691 589 332 000 ns GuestLast=1 729 536 879 776 734 000 ns fSetTimeLastLoop=true )
2024-10-21 18:54:53 (9340): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-10-21 18:54:53 (9340): Guest Log: [INFO] Detected branch: prod
2024-10-21 18:54:53 (9340): Guest Log: This is the prod version of the ATLAS job wrapper
2024-10-21 18:54:53 (9340): Guest Log: Copying input files
2024-10-21 18:54:56 (9340): Guest Log: Copied input files into RunAtlas.
2024-10-21 18:54:56 (9340): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-10-21 18:54:56 (9340): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-10-21 18:54:56 (9340): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-10-21 18:54:56 (9340): Guest Log: Further information can be found at the LHC@home message board.
2024-10-21 18:55:09 (9340): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-10-21 18:55:10 (9340): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-10-21 18:55:10 (9340): Guest Log: 2.6.3.0 1583 0 32040 138587 4 1 3117529 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-10-21 18:55:11 (9340): Guest Log: copied the webapp to /var/www
2024-10-21 18:55:11 (9340): Guest Log: ATHENA_PROC_NUMBER=4
2024-10-21 18:55:11 (9340): Guest Log: ATHENA_CORE_NUMBER=4
2024-10-21 18:55:12 (9340): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-10-21 18:55:12 (9340): Guest Log:  *** Starting ATLAS job. (PandaID=6371142305 taskID=41690988) ***
2024-10-21 20:34:24 (9340): Status Report: Elapsed Time: '6000.000000'
2024-10-21 20:34:24 (9340): Status Report: CPU Time: '6791.156250'
2024-10-21 22:14:30 (9340): Status Report: Elapsed Time: '12000.000000'
2024-10-21 22:14:30 (9340): Status Report: CPU Time: '21178.468750'
2024-10-21 23:54:36 (9340): Status Report: Elapsed Time: '18000.000000'
2024-10-21 23:54:36 (9340): Status Report: CPU Time: '35575.984375'
2024-10-22 01:34:41 (9340): Status Report: Elapsed Time: '24000.000000'
2024-10-22 01:34:41 (9340): Status Report: CPU Time: '49967.921875'
2024-10-22 03:14:47 (9340): Status Report: Elapsed Time: '30000.000000'
2024-10-22 03:14:47 (9340): Status Report: CPU Time: '64349.046875'
2024-10-22 04:54:58 (9340): Status Report: Elapsed Time: '36000.000000'
2024-10-22 04:54:58 (9340): Status Report: CPU Time: '78749.796875'
2024-10-22 06:35:04 (9340): Status Report: Elapsed Time: '42000.000000'
2024-10-22 06:35:04 (9340): Status Report: CPU Time: '93146.328125'
2024-10-22 08:07:20 (9340): Guest Log:  *** Job finished ***
2024-10-22 08:07:20 (9340): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:10,778 | INFO     | [payload] control thread has finished
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:10,962 | INFO     | [payload] validate_post thread has finished
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:12,456 | INFO     | [data] queue_monitor thread has finished
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:13,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083950634816)>', '<ExcThread(monitor, started 140082640058112)>']
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:14,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:14,469 | INFO     | [monitor] control thread has ended
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:18,795 | INFO     | all workflow threads have been joined
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:18,795 | INFO     | end of generic workflow (traces error code: 0)
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:18,795 | INFO     | traces error code: 0
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:18,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:18,965 [wrapper] ==== pilot stdout END ====
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:18,972 [wrapper] ==== wrapper stdout RESUME ====
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:18,978 [wrapper] pilotpid: 5944
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:18,985 [wrapper] Pilot exit status: 0
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:19,237 [wrapper] pandaids: 6371142305
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:19,274 [wrapper] cleanup supervisor_pilot 28720 5945
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:19,283 [wrapper] Test setup, not cleaning
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:19,288 [wrapper] ==== wrapper stdout END ====
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:19,293 [wrapper] ==== wrapper stderr END ====
2024-10-22 08:07:20 (9340): Guest Log: 2024-10-22 06:07:19,303 [wrapper] apfmon messages muted
2024-10-22 08:07:20 (9340): Guest Log:  *** Error codes and diagnostics ***
2024-10-22 08:07:20 (9340): Guest Log:     "exeErrorCode": 0,
2024-10-22 08:07:20 (9340): Guest Log:     "exeErrorDiag": "",
2024-10-22 08:07:20 (9340): Guest Log:     "pilotErrorCode": 0,
2024-10-22 08:07:20 (9340): Guest Log:     "pilotErrorDiag": "",
2024-10-22 08:07:20 (9340): Guest Log:  *** Listing of results directory ***
2024-10-22 08:07:20 (9340): Guest Log: total 189868
2024-10-22 08:07:20 (9340): Guest Log: -rw-r--r--. 1 atlas atlas    486088 Oct 20 15:03 pilot3.tar.gz
2024-10-22 08:07:20 (9340): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Oct 20 15:05 queuedata.json
2024-10-22 08:07:20 (9340): Guest Log: -rwx------. 1 atlas atlas     33946 Oct 20 15:06 runpilot2-wrapper.sh
2024-10-22 08:07:20 (9340): Guest Log: -rwxr-xr-x. 1 atlas atlas      9162 Oct 21 16:54 init_data.xml
2024-10-22 08:07:20 (9340): Guest Log: -rwxr-xr-x. 1 atlas atlas    499663 Oct 21 16:54 input.tar.gz
2024-10-22 08:07:20 (9340): Guest Log: -rwxr-xr-x. 1 atlas atlas     17539 Oct 21 16:54 start_atlas.sh
2024-10-22 08:07:20 (9340): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 21 16:54 EVNT.41690986._001862.pool.root.1 -> /data/./ATLAS.root_0
2024-10-22 08:07:20 (9340): Guest Log: -rw-r--r--. 1 atlas atlas      2642 Oct 21 16:55 pandaJob.out
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas       424 Oct 21 16:55 setup.sh.local
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas   1024359 Oct 21 16:57 agis_schedconf.cvmfs.json
2024-10-22 08:07:20 (9340): Guest Log: drwx------. 4 atlas atlas      4096 Oct 21 16:57 pilot3
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas 183626930 Oct 22 06:05 HITS.41690988._053788.pool.root.1
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 06:06 pilot_heartbeat.json
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 22 06:06 memory_monitor_summary.json
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas   1608777 Oct 22 06:06 agis_ddmendpoints.agis.ALL.json
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas    527242 Oct 22 06:06 log.41690988._053788.job.log.tgz.1
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas      7745 Oct 22 06:07 heartbeat.json
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas      4398 Oct 22 06:07 pilotlog.txt
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas   2977015 Oct 22 06:07 log.41690988._053788.job.log.1
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 06:07 output.list
2024-10-22 08:07:20 (9340): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 06:07 runtime_log
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas   3522560 Oct 22 06:07 result.tar.gz
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas       652 Oct 22 06:07 YQYKDmygmM6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmMxSLDmfaKaFo.diag
2024-10-22 08:07:20 (9340): Guest Log: -rw-r--r--. 1 atlas atlas     10938 Oct 22 06:07 runtime_log.err
2024-10-22 08:07:20 (9340): Guest Log: Looking for outputfile HITS.41690988._053788.pool.root.1
2024-10-22 08:07:20 (9340): Guest Log: HITS file was successfully produced
2024-10-22 08:07:20 (9340): Guest Log: -rw-------. 1 atlas atlas 183626930 Oct 22 06:05 /home/atlas/RunAtlas/HITS.41690988._053788.pool.root.1
2024-10-22 08:07:22 (9340): Guest Log: Successfully finished the ATLAS job!
2024-10-22 08:07:22 (9340): Guest Log: Copying the results back to the shared directory!
2024-10-22 08:07:22 (9340): Guest Log:  *** Contents of shared directory: ***
2024-10-22 08:07:22 (9340): Guest Log: total 404092
2024-10-22 08:07:22 (9340): Guest Log: -rwxrwxrwx. 1 root root 226104509 Oct 21 16:53 ATLAS.root_0
2024-10-22 08:07:22 (9340): Guest Log: -rwxrwxrwx. 1 root root 183626930 Oct 22 06:07 HITS.pool.root.1
2024-10-22 08:07:22 (9340): Guest Log: -rwxrwxrwx. 1 root root      9162 Oct 21 16:53 init_data.xml
2024-10-22 08:07:22 (9340): Guest Log: -rwxrwxrwx. 1 root root    499663 Oct 20 17:26 input.tar.gz
2024-10-22 08:07:22 (9340): Guest Log: -rwxrwxrwx. 1 root root   3522560 Oct 22 06:07 result.tar.gz
2024-10-22 08:07:22 (9340): Guest Log: -rwxrwxrwx. 1 root root     17539 Oct 20 17:26 start_atlas.sh
2024-10-22 08:07:22 (9340): Guest Log:  *** Success! Shutting down the machine. ***
2024-10-22 08:07:22 (9340): VM Completion File Detected.
2024-10-22 08:07:22 (9340): Powering off VM.
2024-10-22 08:07:23 (9340): Successfully stopped VM.
2024-10-22 08:07:23 (9340): Deregistering VM. (boinc_1ec3c320e6d3e7b5, slot#0)
2024-10-22 08:07:23 (9340): Removing network bandwidth throttle group from VM.
2024-10-22 08:07:23 (9340): Removing VM from VirtualBox.
08:07:28 (9340): called boinc_finish(0)

</stderr_txt>
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