Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
08:55:02 (3378009): wrapper (7.7.26015): starting
08:55:02 (3378009): wrapper: running run_atlas (--nthreads 2)
[2024-10-11 08:55:02] Arguments: --nthreads 2
[2024-10-11 08:55:02] Threads: 2
[2024-10-11 08:55:02] Checking for CVMFS
[2024-10-11 08:55:02] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-11 08:55:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-11 08:55:02] Running cvmfs_config stat atlas.cern.ch
[2024-10-11 08:55:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-11 08:55:03] 2.11.0.0 3262932 723 47468 138200 3 56 5364081 6144000 0 130560 0 493579 99.992 124744 1366 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-11 08:55:03] CVMFS is ok
[2024-10-11 08:55:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-11 08:55:03] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-11 08:55:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-11 08:55:03] Further information can be found at the LHC@home message board.
[2024-10-11 08:55:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-11 08:55:03] Checking for apptainer binary...
[2024-10-11 08:55:03] apptainer is not installed, using version from CVMFS
[2024-10-11 08:55:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-11 08:55:03] mordor
[2024-10-11 08:55:03] apptainer works
[2024-10-11 08:55:03] Set ATHENA_PROC_NUMBER=2
[2024-10-11 08:55:03] Set ATHENA_CORE_NUMBER=2
[2024-10-11 08:55:03] Starting ATLAS job with PandaID=6363410214
[2024-10-11 08:55:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-11 13:43:48]  *** The last 200 lines of the pilot log: ***
[2024-10-11 13:43:48] 2024-10-11 11:43:30,340 | INFO     | current chi2=2.8123167134578186 (change=-0.03415731735281434 %)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,340 | INFO     | right removable region: 277
[2024-10-11 13:43:48] 2024-10-11 11:43:30,340 | INFO     | model: linear, x: [1728630047.0, 1728630108.0, 1728630169.0, 1728630230.0, 1728630291.0, 1728630352.0, 1728630413.0, 1728630474.0, 1728630535.0, 1728630596.0, 1728
[2024-10-11 13:43:48] 2024-10-11 11:43:30,340 | INFO     | sum of square deviations: 6662039329.5
[2024-10-11 13:43:48] 2024-10-11 11:43:30,341 | INFO     | sum of deviations: 31047173324.5
[2024-10-11 13:43:48] 2024-10-11 11:43:30,341 | INFO     | mean x: 1728638495.5
[2024-10-11 13:43:48] 2024-10-11 11:43:30,342 | INFO     | mean y: 2248223.809352518
[2024-10-11 13:43:48] 2024-10-11 11:43:30,342 | INFO     | -- intersect: -8053744293.007477
[2024-10-11 13:43:48] 2024-10-11 11:43:30,342 | INFO     | intersect: -8053744293.007477
[2024-10-11 13:43:48] 2024-10-11 11:43:30,342 | INFO     | chi2: 0.9928134017235659
[2024-10-11 13:43:48] 2024-10-11 11:43:30,342 | INFO     | current chi2=0.9928134017235659 (change=64.68560900714463 %)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,342 | INFO     | model: linear, x: [1728630352.0, 1728630413.0, 1728630474.0, 1728630535.0, 1728630596.0, 1728630657.0, 1728630718.0, 1728630779.0, 1728630840.0, 1728630901.0, 1728
[2024-10-11 13:43:48] 2024-10-11 11:43:30,342 | INFO     | sum of square deviations: 6309000152.0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,344 | INFO     | sum of deviations: -3750435122.999998
[2024-10-11 13:43:48] 2024-10-11 11:43:30,344 | INFO     | mean x: 1728638648.0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,344 | INFO     | mean y: 2263254.8315018313
[2024-10-11 13:43:48] 2024-10-11 11:43:30,344 | INFO     | -- intersect: 1029866194.1624233
[2024-10-11 13:43:48] 2024-10-11 11:43:30,344 | INFO     | intersect: 1029866194.1624233
[2024-10-11 13:43:48] 2024-10-11 11:43:30,344 | INFO     | chi2: 0.30417379809715994
[2024-10-11 13:43:48] 2024-10-11 11:43:30,344 | INFO     | current chi2=0.30417379809715994 (change=69.36244035695918 %)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,345 | INFO     | model: linear, x: [1728630657.0, 1728630718.0, 1728630779.0, 1728630840.0, 1728630901.0, 1728630962.0, 1728631023.0, 1728631084.0, 1728631145.0, 1728631206.0, 1728
[2024-10-11 13:43:48] 2024-10-11 11:43:30,345 | INFO     | sum of square deviations: 5968658887.0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,346 | INFO     | sum of deviations: -4998166302.500009
[2024-10-11 13:43:48] 2024-10-11 11:43:30,346 | INFO     | mean x: 1728638800.5
[2024-10-11 13:43:48] 2024-10-11 11:43:30,346 | INFO     | mean y: 2263737.220149254
[2024-10-11 13:43:48] 2024-10-11 11:43:30,346 | INFO     | -- intersect: 1449829156.0902886
[2024-10-11 13:43:48] 2024-10-11 11:43:30,346 | INFO     | intersect: 1449829156.0902886
[2024-10-11 13:43:48] 2024-10-11 11:43:30,347 | INFO     | chi2: 0.12434530601646475
[2024-10-11 13:43:48] 2024-10-11 11:43:30,347 | INFO     | current chi2=0.12434530601646475 (change=59.12030990363408 %)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,347 | INFO     | model: linear, x: [1728630962.0, 1728631023.0, 1728631084.0, 1728631145.0, 1728631206.0, 1728631267.0, 1728631328.0, 1728631389.0, 1728631450.0, 1728631511.0, 1728
[2024-10-11 13:43:48] 2024-10-11 11:43:30,347 | INFO     | sum of square deviations: 5640782972.0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,348 | INFO     | sum of deviations: 7435676374.0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,348 | INFO     | mean x: 1728638953.0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,349 | INFO     | mean y: 2257977.4600760457
[2024-10-11 13:43:48] 2024-10-11 11:43:30,349 | INFO     | -- intersect: -2276432744.342471
[2024-10-11 13:43:48] 2024-10-11 11:43:30,349 | INFO     | intersect: -2276432744.342471
[2024-10-11 13:43:48] 2024-10-11 11:43:30,349 | INFO     | chi2: 0.003467416521430806
[2024-10-11 13:43:48] 2024-10-11 11:43:30,349 | INFO     | current chi2=0.003467416521430806 (change=97.21146166870854 %)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,349 | INFO     | model: linear, x: [1728631267.0, 1728631328.0, 1728631389.0, 1728631450.0, 1728631511.0, 1728631572.0, 1728631633.0, 1728631694.0, 1728631755.0, 1728631816.0, 1728
[2024-10-11 13:43:48] 2024-10-11 11:43:30,349 | INFO     | sum of square deviations: 5325139844.5
[2024-10-11 13:43:48] 2024-10-11 11:43:30,351 | INFO     | sum of deviations: 6063238380.500001
[2024-10-11 13:43:48] 2024-10-11 11:43:30,351 | INFO     | mean x: 1728639105.5
[2024-10-11 13:43:48] 2024-10-11 11:43:30,351 | INFO     | mean y: 2258640.5620155036
[2024-10-11 13:43:48] 2024-10-11 11:43:30,351 | INFO     | -- intersect: -1965980931.8364646
[2024-10-11 13:43:48] 2024-10-11 11:43:30,351 | INFO     | intersect: -1965980931.8364646
[2024-10-11 13:43:48] 2024-10-11 11:43:30,351 | INFO     | chi2: 0.002859410922301813
[2024-10-11 13:43:48] 2024-10-11 11:43:30,351 | INFO     | current chi2=0.002859410922301813 (change=17.534830193348203 %)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,351 | INFO     | left removable region: 50
[2024-10-11 13:43:48] 2024-10-11 11:43:30,352 | INFO     | model: linear, x: [1728632792.0, 1728632853.0, 1728632914.0, 1728632975.0, 1728633036.0, 1728633097.0, 1728633158.0, 1728633219.0, 1728633280.0, 1728633341.0, 1728
[2024-10-11 13:43:48] 2024-10-11 11:43:30,352 | INFO     | sum of square deviations: 3627000098.0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,353 | INFO     | sum of deviations: 2334667396.0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,353 | INFO     | mean x: 1728639685.0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,353 | INFO     | mean y: 2260258.8546255506
[2024-10-11 13:43:48] 2024-10-11 11:43:30,353 | INFO     | -- intersect: -1110449584.805602
[2024-10-11 13:43:48] 2024-10-11 11:43:30,353 | INFO     | intersect: -1110449584.805602
[2024-10-11 13:43:48] 2024-10-11 11:43:30,353 | INFO     | chi2: 0.0022250326065217083
[2024-10-11 13:43:48] 2024-10-11 11:43:30,353 | INFO     | -- intersect: -1110449584.805602
[2024-10-11 13:43:48] 2024-10-11 11:43:30,353 | INFO     | current memory leak: 0.64 B/s (using 227 data points, chi2=0.00)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | ..............................
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | . Timing measurements:
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | . get job = 0 s
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | . initial setup = 9 s
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | . payload setup = 4 s
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | . stage-in = 0 s
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | . payload execution = 17236 s
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | . stage-out = 4 s
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | . log creation = 0 s
[2024-10-11 13:43:48] 2024-10-11 11:43:30,354 | INFO     | ..............................
[2024-10-11 13:43:48] 2024-10-11 11:43:30,423 | INFO     | 
[2024-10-11 13:43:48] 2024-10-11 11:43:30,423 | INFO     | job summary report
[2024-10-11 13:43:48] 2024-10-11 11:43:30,423 | INFO     | --------------------------------------------------
[2024-10-11 13:43:48] 2024-10-11 11:43:30,423 | INFO     | PanDA job id: 6363410214
[2024-10-11 13:43:48] 2024-10-11 11:43:30,423 | INFO     | task id: 41481167
[2024-10-11 13:43:48] 2024-10-11 11:43:30,423 | INFO     | errors: (none)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,423 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-11 13:43:48] 2024-10-11 11:43:30,423 | INFO     | pilot state: finished 
[2024-10-11 13:43:48] 2024-10-11 11:43:30,423 | INFO     | transexitcode: 0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | exeerrorcode: 0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | exeerrordiag: 
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | exitcode: 0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | exitmsg: OK
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | cpuconsumptiontime: 32591 s
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | nevents: 400
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | neventsw: 0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | pid: 3387934
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | pgrp: 3387934
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | corecount: 2
[2024-10-11 13:43:48] 2024-10-11 11:43:30,424 | INFO     | event service: False
[2024-10-11 13:43:48] 2024-10-11 11:43:30,425 | INFO     | sizes: {0: 2437128, 3: 2437334, 11: 2437362, 17245: 2469305, 17250: 2478343, 17251: 2478399, 17278: 2478697}
[2024-10-11 13:43:48] 2024-10-11 11:43:30,425 | INFO     | --------------------------------------------------
[2024-10-11 13:43:48] 2024-10-11 11:43:30,425 | INFO     | 
[2024-10-11 13:43:48] 2024-10-11 11:43:30,425 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | job 6363410214 has completed (purged errors)
[2024-10-11 13:43:48] 2024-10-11 11:43:30,441 | INFO     | overall cleanup function is called
[2024-10-11 13:43:48] 2024-10-11 11:43:31,445 | INFO     | --- collectZombieJob: --- 10, [3387934]
[2024-10-11 13:43:48] 2024-10-11 11:43:31,446 | INFO     | zombie collector waiting for pid 3387934
[2024-10-11 13:43:48] 2024-10-11 11:43:31,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-11 13:43:48] 2024-10-11 11:43:31,446 | INFO     | collected zombie processes
[2024-10-11 13:43:48] 2024-10-11 11:43:31,446 | INFO     | will  attempt to kill all subprocesses of pid=3387934
[2024-10-11 13:43:48] 2024-10-11 11:43:31,478 | INFO     | process IDs to be killed: [3387934] (in reverse order)
[2024-10-11 13:43:48] 2024-10-11 11:43:31,506 | WARNING  | found no corresponding commands to process id(s)
[2024-10-11 13:43:48] 2024-10-11 11:43:31,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-11 13:43:48] 2024-10-11 11:43:31,508 | INFO     | did not find any defunct processes belonging to 3387934
[2024-10-11 13:43:48] 2024-10-11 11:43:31,509 | INFO     | did not find any defunct processes belonging to 3387934
[2024-10-11 13:43:48] 2024-10-11 11:43:31,509 | INFO     | ready for new job
[2024-10-11 13:43:48] 2024-10-11 11:43:31,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-11 13:43:48] 2024-10-11 11:43:31,511 | INFO     | *************************************
[2024-10-11 13:43:48] 2024-10-11 11:43:31,511 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-11 13:43:48] 2024-10-11 11:43:31,511 | INFO     | *************************************
[2024-10-11 13:43:48] 2024-10-11 11:43:31,511 | INFO     | 
[2024-10-11 13:43:48] 2024-10-11 11:43:31,529 | INFO     | architecture information:
[2024-10-11 13:43:48] 2024-10-11 11:43:31,530 | INFO     | executing command: cat /etc/os-release
[2024-10-11 13:43:48] 2024-10-11 11:43:31,543 | INFO     | cat /etc/os-release:
[2024-10-11 13:43:48] NAME="CentOS Linux"
[2024-10-11 13:43:48] VERSION="7 (Core)"
[2024-10-11 13:43:48] ID="centos"
[2024-10-11 13:43:48] ID_LIKE="rhel fedora"
[2024-10-11 13:43:48] VERSION_ID="7"
[2024-10-11 13:43:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-11 13:43:48] ANSI_COLOR="0;31"
[2024-10-11 13:43:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-11 13:43:48] HOME_URL="https://www.centos.org/"
[2024-10-11 13:43:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-11 13:43:48] 
[2024-10-11 13:43:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-11 13:43:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-11 13:43:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-11 13:43:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-11 13:43:48] 
[2024-10-11 13:43:48] 2024-10-11 11:43:31,544 | INFO     | *************************************
[2024-10-11 13:43:48] 2024-10-11 11:43:32,045 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-10-11 13:43:48] 2024-10-11 11:43:32,061 | INFO     | sufficient remaining disk space (421265408000 B)
[2024-10-11 13:43:48] 2024-10-11 11:43:32,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-11 13:43:48] 2024-10-11 11:43:32,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-11 13:43:48] 2024-10-11 11:43:32,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-11 13:43:48] 2024-10-11 11:43:32,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-11 13:43:48] 2024-10-11 11:43:32,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-11 13:43:48] 2024-10-11 11:43:32,062 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-11 13:43:48] 2024-10-11 11:43:32,063 | INFO     | aborting loop
[2024-10-11 13:43:48] 2024-10-11 11:43:32,063 | INFO     | found 0 job(s) in 20 queues
[2024-10-11 13:43:48] 2024-10-11 11:43:32,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-11 13:43:48] 2024-10-11 11:43:32,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-11 13:43:48] 2024-10-11 11:43:32,250 | INFO     | all job control threads have been joined
[2024-10-11 13:43:48] 2024-10-11 11:43:32,684 | INFO     | all payload control threads have been joined
[2024-10-11 13:43:48] 2024-10-11 11:43:33,067 | INFO     | [job] retrieve thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:33,068 | INFO     | [job] job monitor thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:33,068 | INFO     | [job] queue monitor thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:33,092 | INFO     | all data control threads have been joined
[2024-10-11 13:43:48] 2024-10-11 11:43:33,101 | INFO     | [payload] failed_post thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:33,183 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-11 13:43:48] 2024-10-11 11:43:33,256 | INFO     | [job] control thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:33,689 | INFO     | [payload] control thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:33,705 | INFO     | [job] create_data_payload thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:33,872 | INFO     | [job] validate thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:33,889 | INFO     | [payload] validate_post thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:33,937 | INFO     | [data] copytool_in thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:34,096 | INFO     | [data] control thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:34,354 | INFO     | [payload] validate_pre thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:34,567 | INFO     | [payload] execute_payloads thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:35,189 | INFO     | [data] copytool_out thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:36,068 | INFO     | [data] queue_monitor thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:42,493 | INFO     | job.realtimelogging is not enabled
[2024-10-11 13:43:48] 2024-10-11 11:43:43,497 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-11 13:43:48] 2024-10-11 11:43:43,621 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057544816448)>', '<ExcThread(monitor, started 140056601818880)>']
[2024-10-11 13:43:48] 2024-10-11 11:43:44,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-11 13:43:48] 2024-10-11 11:43:44,115 | INFO     | [monitor] control thread has ended
[2024-10-11 13:43:48] 2024-10-11 11:43:48,645 | INFO     | all workflow threads have been joined
[2024-10-11 13:43:48] 2024-10-11 11:43:48,646 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-11 13:43:48] 2024-10-11 11:43:48,646 | INFO     | traces error code: 0
[2024-10-11 13:43:48] 2024-10-11 11:43:48,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-11 13:43:48] 2024-10-11 11:43:48,729 [wrapper] ==== pilot stdout END ====
[2024-10-11 13:43:48] 2024-10-11 11:43:48,731 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-11 13:43:48] 2024-10-11 11:43:48,732 [wrapper] pilotpid: 3381595
[2024-10-11 13:43:48] 2024-10-11 11:43:48,734 [wrapper] Pilot exit status: 0
[2024-10-11 13:43:48] 2024-10-11 11:43:48,741 [wrapper] pandaids: 6363410214
[2024-10-11 13:43:48] 2024-10-11 11:43:48,753 [wrapper] cleanup supervisor_pilot 3418686 3381596
[2024-10-11 13:43:48] 2024-10-11 11:43:48,755 [wrapper] Test setup, not cleaning
[2024-10-11 13:43:48] 2024-10-11 11:43:48,757 [wrapper] ==== wrapper stdout END ====
[2024-10-11 13:43:48] 2024-10-11 11:43:48,758 [wrapper] ==== wrapper stderr END ====
[2024-10-11 13:43:48] 2024-10-11 11:43:48,761 [wrapper] apfmon messages muted
[2024-10-11 13:43:48]  *** Error codes and diagnostics ***
[2024-10-11 13:43:48]     "exeErrorCode": 0,
[2024-10-11 13:43:48]     "exeErrorDiag": "",
[2024-10-11 13:43:48]     "pilotErrorCode": 0,
[2024-10-11 13:43:48]     "pilotErrorDiag": "",
[2024-10-11 13:43:48]  *** Listing of results directory ***
[2024-10-11 13:43:48] total 469404
[2024-10-11 13:43:48] -rw-r--r-- 1 root root       493994 Sep 25 06:31 pilot3.tar.gz
[2024-10-11 13:43:48] -rw-r--r-- 1 root root         5653 Oct 11 08:17 queuedata.json
[2024-10-11 13:43:48] -rwx------ 1 4871    1028     33946 Oct 11 08:18 runpilot2-wrapper.sh
[2024-10-11 13:43:48] -rw-r--r-- 1 root root          100 Oct 11 08:55 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-11 13:43:48] -rwxr-xr-x 1 root root         7986 Oct 11 08:55 run_atlas
[2024-10-11 13:43:48] -rw-r--r-- 1 root root          105 Oct 11 08:55 job.xml
[2024-10-11 13:43:48] -rw-r--r-- 1 root root         6134 Oct 11 08:55 init_data.xml
[2024-10-11 13:43:48] -rw-r--r-- 2 root root    312727202 Oct 11 08:55 EVNT.41239421._001273.pool.root.1
[2024-10-11 13:43:48] -rw-r--r-- 2 root root        17537 Oct 11 08:55 start_atlas.sh
[2024-10-11 13:43:48] drwxrwx--x 2 root root         4096 Oct 11 08:55 shared
[2024-10-11 13:43:48] -rw-r--r-- 2 root root       506309 Oct 11 08:55 input.tar.gz
[2024-10-11 13:43:48] -rw-r--r-- 1 root root            0 Oct 11 08:55 boinc_lockfile
[2024-10-11 13:43:48] -rw-r--r-- 1 root root         2459 Oct 11 08:55 pandaJob.out
[2024-10-11 13:43:48] -rw------- 1 root root          424 Oct 11 08:55 setup.sh.local
[2024-10-11 13:43:48] -rw------- 1 root root      1031953 Oct 11 08:55 agis_schedconf.cvmfs.json
[2024-10-11 13:43:48] drwxr-xr-x 6  503 dialout      4096 Oct 11 08:55 pilot3
[2024-10-11 13:43:48] -rw------- 1 root root    159786886 Oct 11 13:42 HITS.41481167._050589.pool.root.1
[2024-10-11 13:43:48] -rw-r--r-- 1 root root          530 Oct 11 13:42 boinc_task_state.xml
[2024-10-11 13:43:48] -rw------- 1 root root         1028 Oct 11 13:42 memory_monitor_summary.json
[2024-10-11 13:43:48] -rw------- 1 root root      1617228 Oct 11 13:43 agis_ddmendpoints.agis.ALL.json
[2024-10-11 13:43:48] -rw------- 1 root root       327362 Oct 11 13:43 log.41481167._050589.job.log.tgz.1
[2024-10-11 13:43:48] -rw------- 1 root root           95 Oct 11 13:43 pilot_heartbeat.json
[2024-10-11 13:43:48] -rw------- 1 root root         7683 Oct 11 13:43 heartbeat.json
[2024-10-11 13:43:48] -rw-r--r-- 1 root root         8192 Oct 11 13:43 boinc_mmap_file
[2024-10-11 13:43:48] -rw-r--r-- 1 root root           28 Oct 11 13:43 wrapper_checkpoint.txt
[2024-10-11 13:43:48] -rw------- 1 root root         4414 Oct 11 13:43 pilotlog.txt
[2024-10-11 13:43:48] -rw------- 1 root root      1806997 Oct 11 13:43 log.41481167._050589.job.log.1
[2024-10-11 13:43:48] -rw------- 1 root root          357 Oct 11 13:43 output.list
[2024-10-11 13:43:48] -rw-r--r-- 1 root root          620 Oct 11 13:43 runtime_log
[2024-10-11 13:43:48] -rw------- 1 root root      2150400 Oct 11 13:43 result.tar.gz
[2024-10-11 13:43:48] -rw-r--r-- 1 root root        11091 Oct 11 13:43 runtime_log.err
[2024-10-11 13:43:48] -rw------- 1 root root          643 Oct 11 13:43 7qFMDmj9NJ6n7OlckoGmwREmGgkVDo1bjSoqOlfODm4ZyKDmRGDLOm.diag
[2024-10-11 13:43:48] -rw-r--r-- 1 root root        21690 Oct 11 13:43 stderr.txt
[2024-10-11 13:43:48] HITS file was successfully produced:
[2024-10-11 13:43:48] -rw------- 1 root root 159786886 Oct 11 13:42 shared/HITS.pool.root.1
[2024-10-11 13:43:48]  *** Contents of shared directory: ***
[2024-10-11 13:43:48] total 464068
[2024-10-11 13:43:48] -rw-r--r-- 2 root root 312727202 Oct 11 08:55 ATLAS.root_0
[2024-10-11 13:43:48] -rw-r--r-- 2 root root     17537 Oct 11 08:55 start_atlas.sh
[2024-10-11 13:43:48] -rw-r--r-- 2 root root    506309 Oct 11 08:55 input.tar.gz
[2024-10-11 13:43:48] -rw------- 1 root root 159786886 Oct 11 13:42 HITS.pool.root.1
[2024-10-11 13:43:48] -rw------- 1 root root   2150400 Oct 11 13:43 result.tar.gz
13:43:50 (3378009): run_atlas exited; CPU time 32573.466224
13:43:50 (3378009): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN