Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
04:54:34 (3339209): wrapper (7.7.26015): starting
04:54:34 (3339209): wrapper: running run_atlas (--nthreads 2)
[2024-10-11 04:54:34] Arguments: --nthreads 2
[2024-10-11 04:54:34] Threads: 2
[2024-10-11 04:54:34] Checking for CVMFS
[2024-10-11 04:54:34] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-11 04:54:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-11 04:54:34] Running cvmfs_config stat atlas.cern.ch
[2024-10-11 04:54:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-11 04:54:35] 2.11.0.0 3262932 482 46460 138194 3 56 5229878 6144000 0 130560 0 328983 99.992 65526 1161 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-11 04:54:35] CVMFS is ok
[2024-10-11 04:54:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-11 04:54:35] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-11 04:54:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-11 04:54:35] Further information can be found at the LHC@home message board.
[2024-10-11 04:54:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-11 04:54:35] Checking for apptainer binary...
[2024-10-11 04:54:35] apptainer is not installed, using version from CVMFS
[2024-10-11 04:54:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-11 04:54:36] mordor
[2024-10-11 04:54:36] apptainer works
[2024-10-11 04:54:36] Set ATHENA_PROC_NUMBER=2
[2024-10-11 04:54:36] Set ATHENA_CORE_NUMBER=2
[2024-10-11 04:54:36] Starting ATLAS job with PandaID=6362247074
[2024-10-11 04:54:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-11 08:51:28]  *** The last 200 lines of the pilot log: ***
[2024-10-11 08:51:28] 2024-10-11 06:51:09,608 | INFO     | current chi2=2.687448523685756 (change=-0.05275783068813157 %)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,608 | INFO     | right removable region: 226
[2024-10-11 08:51:28] 2024-10-11 06:51:09,608 | INFO     | model: linear, x: [1728615620.0, 1728615681.0, 1728615742.0, 1728615803.0, 1728615864.0, 1728615925.0, 1728615986.0, 1728616047.0, 1728616108.0, 1728616169.0, 1728
[2024-10-11 08:51:28] 2024-10-11 06:51:09,608 | INFO     | sum of square deviations: 3627000098.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,609 | INFO     | sum of deviations: 14866587122.99999
[2024-10-11 08:51:28] 2024-10-11 06:51:09,609 | INFO     | mean x: 1728622513.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,609 | INFO     | mean y: 2258811.6211453746
[2024-10-11 08:51:28] 2024-10-11 06:51:09,609 | INFO     | -- intersect: -7083133109.505206
[2024-10-11 08:51:28] 2024-10-11 06:51:09,609 | INFO     | intersect: -7083133109.505206
[2024-10-11 08:51:28] 2024-10-11 06:51:09,610 | INFO     | chi2: 0.8937183181752603
[2024-10-11 08:51:28] 2024-10-11 06:51:09,610 | INFO     | current chi2=0.8937183181752603 (change=66.727183174246 %)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,610 | INFO     | model: linear, x: [1728615925.0, 1728615986.0, 1728616047.0, 1728616108.0, 1728616169.0, 1728616230.0, 1728616291.0, 1728616352.0, 1728616413.0, 1728616474.0, 1728
[2024-10-11 08:51:28] 2024-10-11 06:51:09,610 | INFO     | sum of square deviations: 3392567795.5
[2024-10-11 08:51:28] 2024-10-11 06:51:09,611 | INFO     | sum of deviations: -13593626008.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,611 | INFO     | mean x: 1728622665.5
[2024-10-11 08:51:28] 2024-10-11 06:51:09,611 | INFO     | mean y: 2277324.5315315314
[2024-10-11 08:51:28] 2024-10-11 06:51:09,611 | INFO     | -- intersect: 6928668023.319583
[2024-10-11 08:51:28] 2024-10-11 06:51:09,611 | INFO     | intersect: 6928668023.319583
[2024-10-11 08:51:28] 2024-10-11 06:51:09,612 | INFO     | chi2: 0.18931033085881852
[2024-10-11 08:51:28] 2024-10-11 06:51:09,612 | INFO     | current chi2=0.18931033085881852 (change=78.81767364404695 %)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,612 | INFO     | model: linear, x: [1728616230.0, 1728616291.0, 1728616352.0, 1728616413.0, 1728616474.0, 1728616535.0, 1728616596.0, 1728616657.0, 1728616718.0, 1728616779.0, 1728
[2024-10-11 08:51:28] 2024-10-11 06:51:09,612 | INFO     | sum of square deviations: 3168461268.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,613 | INFO     | sum of deviations: -6687880790.000003
[2024-10-11 08:51:28] 2024-10-11 06:51:09,613 | INFO     | mean x: 1728622818.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,613 | INFO     | mean y: 2272571.341013825
[2024-10-11 08:51:28] 2024-10-11 06:51:09,613 | INFO     | -- intersect: 3650991100.557976
[2024-10-11 08:51:28] 2024-10-11 06:51:09,613 | INFO     | intersect: 3650991100.557976
[2024-10-11 08:51:28] 2024-10-11 06:51:09,614 | INFO     | chi2: 0.12115705490568664
[2024-10-11 08:51:28] 2024-10-11 06:51:09,614 | INFO     | current chi2=0.12115705490568664 (change=36.0008223766501 %)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,614 | INFO     | model: linear, x: [1728616535.0, 1728616596.0, 1728616657.0, 1728616718.0, 1728616779.0, 1728616840.0, 1728616901.0, 1728616962.0, 1728617023.0, 1728617084.0, 1728
[2024-10-11 08:51:28] 2024-10-11 06:51:09,614 | INFO     | sum of square deviations: 2954447953.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,615 | INFO     | sum of deviations: 3490432261.0000005
[2024-10-11 08:51:28] 2024-10-11 06:51:09,615 | INFO     | mean x: 1728622970.5
[2024-10-11 08:51:28] 2024-10-11 06:51:09,615 | INFO     | mean y: 2265354.386792453
[2024-10-11 08:51:28] 2024-10-11 06:51:09,615 | INFO     | -- intersect: -2039957585.1685257
[2024-10-11 08:51:28] 2024-10-11 06:51:09,615 | INFO     | intersect: -2039957585.1685257
[2024-10-11 08:51:28] 2024-10-11 06:51:09,615 | INFO     | chi2: 0.0024707045813443258
[2024-10-11 08:51:28] 2024-10-11 06:51:09,615 | INFO     | current chi2=0.0024707045813443258 (change=97.96074229167453 %)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,616 | INFO     | model: linear, x: [1728616840.0, 1728616901.0, 1728616962.0, 1728617023.0, 1728617084.0, 1728617145.0, 1728617206.0, 1728617267.0, 1728617328.0, 1728617389.0, 1728
[2024-10-11 08:51:28] 2024-10-11 06:51:09,616 | INFO     | sum of square deviations: 2750295288.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,617 | INFO     | sum of deviations: 2579836766.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,617 | INFO     | mean x: 1728623123.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,617 | INFO     | mean y: 2266033.9855072466
[2024-10-11 08:51:28] 2024-10-11 06:51:09,617 | INFO     | -- intersect: -1619220032.1583622
[2024-10-11 08:51:28] 2024-10-11 06:51:09,617 | INFO     | intersect: -1619220032.1583622
[2024-10-11 08:51:28] 2024-10-11 06:51:09,617 | INFO     | chi2: 0.0020026462824398223
[2024-10-11 08:51:28] 2024-10-11 06:51:09,617 | INFO     | current chi2=0.0020026462824398223 (change=18.944324725776404 %)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,617 | INFO     | left removable region: 50
[2024-10-11 08:51:28] 2024-10-11 06:51:09,617 | INFO     | model: linear, x: [1728618365.0, 1728618426.0, 1728618487.0, 1728618548.0, 1728618609.0, 1728618670.0, 1728618731.0, 1728618792.0, 1728618853.0, 1728618914.0, 1728
[2024-10-11 08:51:28] 2024-10-11 06:51:09,618 | INFO     | sum of square deviations: 1690450300.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,618 | INFO     | sum of deviations: 40100424.0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,618 | INFO     | mean x: 1728623702.5
[2024-10-11 08:51:28] 2024-10-11 06:51:09,618 | INFO     | mean y: 2268203.625
[2024-10-11 08:51:28] 2024-10-11 06:51:09,618 | INFO     | -- intersect: -38737759.93790384
[2024-10-11 08:51:28] 2024-10-11 06:51:09,619 | INFO     | intersect: -38737759.93790384
[2024-10-11 08:51:28] 2024-10-11 06:51:09,620 | WARNING  | process 3349136 is no longer using CPU - aborting
[2024-10-11 08:51:28] 2024-10-11 06:51:09,620 | INFO     | chi2: 0.0009623977311105378
[2024-10-11 08:51:28] 2024-10-11 06:51:09,620 | INFO     | -- intersect: -38737759.93790384
[2024-10-11 08:51:28] 2024-10-11 06:51:09,621 | INFO     | current memory leak: 0.02 B/s (using 176 data points, chi2=0.00)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,621 | INFO     | ..............................
[2024-10-11 08:51:28] 2024-10-11 06:51:09,621 | INFO     | . Timing measurements:
[2024-10-11 08:51:28] 2024-10-11 06:51:09,621 | INFO     | . get job = 0 s
[2024-10-11 08:51:28] 2024-10-11 06:51:09,621 | INFO     | . initial setup = 12 s
[2024-10-11 08:51:28] 2024-10-11 06:51:09,621 | INFO     | . payload setup = 3 s
[2024-10-11 08:51:28] 2024-10-11 06:51:09,621 | INFO     | . stage-in = 0 s
[2024-10-11 08:51:28] 2024-10-11 06:51:09,621 | INFO     | . payload execution = 14131 s
[2024-10-11 08:51:28] 2024-10-11 06:51:09,621 | INFO     | . stage-out = 1 s
[2024-10-11 08:51:28] 2024-10-11 06:51:09,622 | INFO     | . log creation = 0 s
[2024-10-11 08:51:28] 2024-10-11 06:51:09,622 | INFO     | ..............................
[2024-10-11 08:51:28] 2024-10-11 06:51:09,888 | INFO     | 
[2024-10-11 08:51:28] 2024-10-11 06:51:09,889 | INFO     | job summary report
[2024-10-11 08:51:28] 2024-10-11 06:51:09,889 | INFO     | --------------------------------------------------
[2024-10-11 08:51:28] 2024-10-11 06:51:09,889 | INFO     | PanDA job id: 6362247074
[2024-10-11 08:51:28] 2024-10-11 06:51:09,889 | INFO     | task id: 41079494
[2024-10-11 08:51:28] 2024-10-11 06:51:09,889 | INFO     | errors: (none)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,889 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-11 08:51:28] 2024-10-11 06:51:09,890 | INFO     | pilot state: finished 
[2024-10-11 08:51:28] 2024-10-11 06:51:09,890 | INFO     | transexitcode: 0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,890 | INFO     | exeerrorcode: 0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,890 | INFO     | exeerrordiag: 
[2024-10-11 08:51:28] 2024-10-11 06:51:09,890 | INFO     | exitcode: 0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,890 | INFO     | exitmsg: OK
[2024-10-11 08:51:28] 2024-10-11 06:51:09,890 | INFO     | cpuconsumptiontime: 26650 s
[2024-10-11 08:51:28] 2024-10-11 06:51:09,890 | INFO     | nevents: 400
[2024-10-11 08:51:28] 2024-10-11 06:51:09,891 | INFO     | neventsw: 0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,891 | INFO     | pid: 3349136
[2024-10-11 08:51:28] 2024-10-11 06:51:09,891 | INFO     | pgrp: 3349136
[2024-10-11 08:51:28] 2024-10-11 06:51:09,891 | INFO     | corecount: 2
[2024-10-11 08:51:28] 2024-10-11 06:51:09,891 | INFO     | event service: False
[2024-10-11 08:51:28] 2024-10-11 06:51:09,891 | INFO     | sizes: {0: 2437318, 3: 2437524, 11: 2437552, 14139: 2468139, 14141: 2477177, 14142: 2477233, 14163: 2477531}
[2024-10-11 08:51:28] 2024-10-11 06:51:09,891 | INFO     | --------------------------------------------------
[2024-10-11 08:51:28] 2024-10-11 06:51:09,891 | INFO     | 
[2024-10-11 08:51:28] 2024-10-11 06:51:09,892 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-10-11 08:51:28] 2024-10-11 06:51:09,909 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,909 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,909 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,909 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,911 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,912 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-11 08:51:28] 2024-10-11 06:51:09,912 | INFO     | job 6362247074 has completed (purged errors)
[2024-10-11 08:51:28] 2024-10-11 06:51:09,912 | INFO     | overall cleanup function is called
[2024-10-11 08:51:28] 2024-10-11 06:51:10,919 | INFO     | --- collectZombieJob: --- 10, [3349136]
[2024-10-11 08:51:28] 2024-10-11 06:51:10,920 | INFO     | zombie collector waiting for pid 3349136
[2024-10-11 08:51:28] 2024-10-11 06:51:10,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-11 08:51:28] 2024-10-11 06:51:10,920 | INFO     | collected zombie processes
[2024-10-11 08:51:28] 2024-10-11 06:51:10,920 | INFO     | will  attempt to kill all subprocesses of pid=3349136
[2024-10-11 08:51:28] 2024-10-11 06:51:10,950 | INFO     | process IDs to be killed: [3349136] (in reverse order)
[2024-10-11 08:51:28] 2024-10-11 06:51:10,978 | WARNING  | found no corresponding commands to process id(s)
[2024-10-11 08:51:28] 2024-10-11 06:51:10,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-11 08:51:28] 2024-10-11 06:51:10,979 | INFO     | did not find any defunct processes belonging to 3349136
[2024-10-11 08:51:28] 2024-10-11 06:51:10,980 | INFO     | did not find any defunct processes belonging to 3349136
[2024-10-11 08:51:28] 2024-10-11 06:51:10,981 | INFO     | ready for new job
[2024-10-11 08:51:28] 2024-10-11 06:51:10,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-11 08:51:28] 2024-10-11 06:51:10,982 | INFO     | *************************************
[2024-10-11 08:51:28] 2024-10-11 06:51:10,982 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-11 08:51:28] 2024-10-11 06:51:10,982 | INFO     | *************************************
[2024-10-11 08:51:28] 2024-10-11 06:51:10,982 | INFO     | 
[2024-10-11 08:51:28] 2024-10-11 06:51:11,001 | INFO     | architecture information:
[2024-10-11 08:51:28] 2024-10-11 06:51:11,002 | INFO     | executing command: cat /etc/os-release
[2024-10-11 08:51:28] 2024-10-11 06:51:11,015 | INFO     | cat /etc/os-release:
[2024-10-11 08:51:28] NAME="CentOS Linux"
[2024-10-11 08:51:28] VERSION="7 (Core)"
[2024-10-11 08:51:28] ID="centos"
[2024-10-11 08:51:28] ID_LIKE="rhel fedora"
[2024-10-11 08:51:28] VERSION_ID="7"
[2024-10-11 08:51:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-11 08:51:28] ANSI_COLOR="0;31"
[2024-10-11 08:51:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-11 08:51:28] HOME_URL="https://www.centos.org/"
[2024-10-11 08:51:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-11 08:51:28] 
[2024-10-11 08:51:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-11 08:51:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-11 08:51:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-11 08:51:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-11 08:51:28] 
[2024-10-11 08:51:28] 2024-10-11 06:51:11,015 | INFO     | *************************************
[2024-10-11 08:51:28] 2024-10-11 06:51:11,518 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-10-11 08:51:28] 2024-10-11 06:51:11,532 | INFO     | sufficient remaining disk space (421188861952 B)
[2024-10-11 08:51:28] 2024-10-11 06:51:11,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-11 08:51:28] 2024-10-11 06:51:11,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-11 08:51:28] 2024-10-11 06:51:11,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-11 08:51:28] 2024-10-11 06:51:11,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-11 08:51:28] 2024-10-11 06:51:11,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-11 08:51:28] 2024-10-11 06:51:11,533 | INFO     | aborting loop
[2024-10-11 08:51:28] 2024-10-11 06:51:11,679 | INFO     | all payload control threads have been joined
[2024-10-11 08:51:28] 2024-10-11 06:51:11,724 | INFO     | found 0 job(s) in 20 queues
[2024-10-11 08:51:28] 2024-10-11 06:51:11,724 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-11 08:51:28] 2024-10-11 06:51:11,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-11 08:51:28] 2024-10-11 06:51:11,812 | INFO     | all data control threads have been joined
[2024-10-11 08:51:28] 2024-10-11 06:51:12,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-11 08:51:28] 2024-10-11 06:51:12,537 | INFO     | [job] retrieve thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:12,538 | INFO     | [job] job monitor thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:12,538 | INFO     | [job] queue monitor thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:12,582 | INFO     | all job control threads have been joined
[2024-10-11 08:51:28] 2024-10-11 06:51:12,684 | INFO     | [payload] control thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:12,817 | INFO     | [data] control thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:12,856 | INFO     | [payload] validate_pre thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:13,329 | INFO     | [payload] failed_post thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:13,464 | INFO     | [payload] execute_payloads thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:13,489 | INFO     | [data] copytool_in thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:13,537 | INFO     | [data] copytool_out thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:13,587 | INFO     | [job] control thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:13,733 | INFO     | [payload] validate_post thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:13,906 | INFO     | [job] validate thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:13,998 | INFO     | [job] create_data_payload thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:16,474 | INFO     | [data] queue_monitor thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:22,561 | INFO     | job.realtimelogging is not enabled
[2024-10-11 08:51:28] 2024-10-11 06:51:23,565 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-11 08:51:28] 2024-10-11 06:51:23,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193673959232)>', '<ExcThread(monitor, started 140193092855552)>']
[2024-10-11 08:51:28] 2024-10-11 06:51:23,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-11 08:51:28] 2024-10-11 06:51:23,779 | INFO     | [monitor] control thread has ended
[2024-10-11 08:51:28] 2024-10-11 06:51:28,783 | INFO     | all workflow threads have been joined
[2024-10-11 08:51:28] 2024-10-11 06:51:28,783 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-11 08:51:28] 2024-10-11 06:51:28,783 | INFO     | traces error code: 0
[2024-10-11 08:51:28] 2024-10-11 06:51:28,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-11 08:51:28] 2024-10-11 06:51:28,870 [wrapper] ==== pilot stdout END ====
[2024-10-11 08:51:28] 2024-10-11 06:51:28,871 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-11 08:51:28] 2024-10-11 06:51:28,872 [wrapper] pilotpid: 3342797
[2024-10-11 08:51:28] 2024-10-11 06:51:28,874 [wrapper] Pilot exit status: 0
[2024-10-11 08:51:28] 2024-10-11 06:51:28,881 [wrapper] pandaids: 6362247074
[2024-10-11 08:51:28] 2024-10-11 06:51:28,894 [wrapper] cleanup supervisor_pilot 3375437 3342798
[2024-10-11 08:51:28] 2024-10-11 06:51:28,896 [wrapper] Test setup, not cleaning
[2024-10-11 08:51:28] 2024-10-11 06:51:28,898 [wrapper] ==== wrapper stdout END ====
[2024-10-11 08:51:28] 2024-10-11 06:51:28,899 [wrapper] ==== wrapper stderr END ====
[2024-10-11 08:51:28] 2024-10-11 06:51:28,902 [wrapper] apfmon messages muted
[2024-10-11 08:51:28]  *** Error codes and diagnostics ***
[2024-10-11 08:51:28]     "exeErrorCode": 0,
[2024-10-11 08:51:28]     "exeErrorDiag": "",
[2024-10-11 08:51:28]     "pilotErrorCode": 0,
[2024-10-11 08:51:28]     "pilotErrorDiag": "",
[2024-10-11 08:51:28]  *** Listing of results directory ***
[2024-10-11 08:51:28] total 585152
[2024-10-11 08:51:28] -rw-r--r-- 1 root root    484599 Oct 11 02:24 pilot3.tar.gz
[2024-10-11 08:51:28] -rw-r--r-- 1 root root      5653 Oct 11 02:45 queuedata.json
[2024-10-11 08:51:28] -rwx------ 1 4871 1028     33946 Oct 11 02:46 runpilot2-wrapper.sh
[2024-10-11 08:51:28] -rw-r--r-- 1 root root       100 Oct 11 04:54 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-11 08:51:28] -rwxr-xr-x 1 root root      7986 Oct 11 04:54 run_atlas
[2024-10-11 08:51:28] -rw-r--r-- 1 root root       105 Oct 11 04:54 job.xml
[2024-10-11 08:51:28] -rw-r--r-- 2 root root     17537 Oct 11 04:54 start_atlas.sh
[2024-10-11 08:51:28] drwxrwx--x 2 root root      4096 Oct 11 04:54 shared
[2024-10-11 08:51:28] -rw-r--r-- 2 root root    498210 Oct 11 04:54 input.tar.gz
[2024-10-11 08:51:28] -rw-r--r-- 1 root root      6134 Oct 11 04:54 init_data.xml
[2024-10-11 08:51:28] -rw-r--r-- 2 root root 440794668 Oct 11 04:54 EVNT.41079492._000012.pool.root.1
[2024-10-11 08:51:28] -rw-r--r-- 1 root root         0 Oct 11 04:54 boinc_lockfile
[2024-10-11 08:51:28] -rw-r--r-- 1 root root      2595 Oct 11 04:54 pandaJob.out
[2024-10-11 08:51:28] -rw------- 1 root root       424 Oct 11 04:54 setup.sh.local
[2024-10-11 08:51:28] -rw------- 1 root root   1031969 Oct 11 04:54 agis_schedconf.cvmfs.json
[2024-10-11 08:51:28] drwxr-xr-x 4  320  320      4096 Oct 11 04:54 pilot3
[2024-10-11 08:51:28] -rw------- 1 root root 151020421 Oct 11 08:50 HITS.41079494._000300.pool.root.1
[2024-10-11 08:51:28] -rw------- 1 root root      1030 Oct 11 08:50 memory_monitor_summary.json
[2024-10-11 08:51:28] -rw-r--r-- 1 root root       531 Oct 11 08:50 boinc_task_state.xml
[2024-10-11 08:51:28] -rw------- 1 root root        95 Oct 11 08:50 pilot_heartbeat.json
[2024-10-11 08:51:28] -rw------- 1 root root   1617228 Oct 11 08:50 agis_ddmendpoints.agis.ALL.json
[2024-10-11 08:51:28] -rw------- 1 root root    321485 Oct 11 08:50 log.41079494._000300.job.log.tgz.1
[2024-10-11 08:51:28] -rw------- 1 root root      7682 Oct 11 08:51 heartbeat.json
[2024-10-11 08:51:28] -rw-r--r-- 1 root root      8192 Oct 11 08:51 boinc_mmap_file
[2024-10-11 08:51:28] -rw-r--r-- 1 root root        28 Oct 11 08:51 wrapper_checkpoint.txt
[2024-10-11 08:51:28] -rw------- 1 root root      4291 Oct 11 08:51 pilotlog.txt
[2024-10-11 08:51:28] -rw------- 1 root root   1430516 Oct 11 08:51 log.41079494._000300.job.log.1
[2024-10-11 08:51:28] -rw------- 1 root root       357 Oct 11 08:51 output.list
[2024-10-11 08:51:28] -rw-r--r-- 1 root root       620 Oct 11 08:51 runtime_log
[2024-10-11 08:51:28] -rw------- 1 root root   1771520 Oct 11 08:51 result.tar.gz
[2024-10-11 08:51:28] -rw-r--r-- 1 root root     11091 Oct 11 08:51 runtime_log.err
[2024-10-11 08:51:28] -rw------- 1 root root       641 Oct 11 08:51 j5WNDmPyIJ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmh71KDmgX193n.diag
[2024-10-11 08:51:28] -rw-r--r-- 1 root root     21644 Oct 11 08:51 stderr.txt
[2024-10-11 08:51:28] HITS file was successfully produced:
[2024-10-11 08:51:28] -rw------- 1 root root 151020421 Oct 11 08:50 shared/HITS.pool.root.1
[2024-10-11 08:51:28]  *** Contents of shared directory: ***
[2024-10-11 08:51:28] total 580196
[2024-10-11 08:51:28] -rw-r--r-- 2 root root     17537 Oct 11 04:54 start_atlas.sh
[2024-10-11 08:51:28] -rw-r--r-- 2 root root    498210 Oct 11 04:54 input.tar.gz
[2024-10-11 08:51:28] -rw-r--r-- 2 root root 440794668 Oct 11 04:54 ATLAS.root_0
[2024-10-11 08:51:28] -rw------- 1 root root 151020421 Oct 11 08:50 HITS.pool.root.1
[2024-10-11 08:51:28] -rw------- 1 root root   1771520 Oct 11 08:51 result.tar.gz
08:51:30 (3339209): run_atlas exited; CPU time 26634.574305
08:51:30 (3339209): called boinc_finish(0)

</stderr_txt>
]]>

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