Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
12:37:44 (1279585): wrapper (7.7.26015): starting
12:37:44 (1279585): wrapper: running run_atlas (--nthreads 4)
[2024-10-11 12:37:44] Arguments: --nthreads 4
[2024-10-11 12:37:44] Threads: 4
[2024-10-11 12:37:44] Checking for CVMFS
[2024-10-11 12:37:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-11 12:37:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-11 12:37:44] Running cvmfs_config stat atlas.cern.ch
[2024-10-11 12:37:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-11 12:37:44] 2.11.5.0 1131365 528 58152 138217 1 56 2758314 4096001 0 130560 0 571815 99.989 176570 5321 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-11 12:37:44] CVMFS is ok
[2024-10-11 12:37:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-11 12:37:44] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-11 12:37:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-11 12:37:44] Further information can be found at the LHC@home message board.
[2024-10-11 12:37:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-11 12:37:44] Checking for apptainer binary...
[2024-10-11 12:37:44] apptainer is not installed, using version from CVMFS
[2024-10-11 12:37:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-11 12:37:45] tower
[2024-10-11 12:37:45] apptainer works
[2024-10-11 12:37:45] Set ATHENA_PROC_NUMBER=4
[2024-10-11 12:37:45] Set ATHENA_CORE_NUMBER=4
[2024-10-11 12:37:45] Starting ATLAS job with PandaID=6361901314
[2024-10-11 12:37:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-11 13:54:45]  *** The last 200 lines of the pilot log: ***
[2024-10-11 13:54:45]  domain=
[2024-10-11 13:54:45]  filesize=224568
[2024-10-11 13:54:45]  filetype=log
[2024-10-11 13:54:45]  guid=d7b7570e-2005-4778-9fff-81ad36effcc2
[2024-10-11 13:54:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-10-11 13:54:45]  is_altstaged=None
[2024-10-11 13:54:45]  is_tar=False
[2024-10-11 13:54:45]  lfn=log.41079486._000151.job.log.tgz.1
[2024-10-11 13:54:45]  mtime=0
[2024-10-11 13:54:45]  protocol_id=None
[2024-10-11 13:54:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-11 13:54:45]  replicas=None
[2024-10-11 13:54:45]  scope=mc23_13p6TeV
[2024-10-11 13:54:45]  status=None
[2024-10-11 13:54:45]  status_code=0
[2024-10-11 13:54:45]  storage_token=
[2024-10-11 13:54:45]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6361901314/log.41079486._000151.job.log.tgz.1
[2024-10-11 13:54:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/35/log.41079486._000151.job.log.tgz.1
[2024-10-11 13:54:45]  workdir=None
[2024-10-11 13:54:45] ]
[2024-10-11 13:54:45] 2024-10-11 18:54:17,117 | INFO     | transferring file log.41079486._000151.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6361901314/log.41079486._000151.job.log.tgz.1 to /var/lib/boinc
[2024-10-11 13:54:45] 2024-10-11 18:54:17,117 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6361901314/log.41079486._000151.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.410794
[2024-10-11 13:54:45] 2024-10-11 18:54:17,128 | INFO     | adding to output.list: log.41079486._000151.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/35/log.41079486._000151.job.log.tg
[2024-10-11 13:54:45] 2024-10-11 18:54:17,129 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-11 13:54:45] 2024-10-11 18:54:17,129 | INFO     | summary of transferred files:
[2024-10-11 13:54:45] 2024-10-11 18:54:17,129 | INFO     |  -- lfn=log.41079486._000151.job.log.tgz.1, status_code=0, status=transferred
[2024-10-11 13:54:45] 2024-10-11 18:54:17,129 | INFO     | stage-out finished correctly
[2024-10-11 13:54:45] 2024-10-11 18:54:17,613 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-11 13:54:45] 2024-10-11 18:54:17,654 | INFO     | job 6361901314 has state=finished
[2024-10-11 13:54:45] 2024-10-11 18:54:17,654 | INFO     | preparing for final server update for job 6361901314 in state='finished'
[2024-10-11 13:54:45] 2024-10-11 18:54:17,654 | INFO     | this job has now completed (state=finished)
[2024-10-11 13:54:45] 2024-10-11 18:54:17,654 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-11 13:54:45] 2024-10-11 18:54:17,654 | INFO     | log transfer has been attempted: DONE
[2024-10-11 13:54:45] 2024-10-11 18:54:17,654 | INFO     | job 6361901314 has finished - writing final server update
[2024-10-11 13:54:45] 2024-10-11 18:54:17,654 | INFO     | total number of processed events: 400 (read)
[2024-10-11 13:54:45] 2024-10-11 18:54:17,656 | INFO     | executing command: lscpu
[2024-10-11 13:54:45] 2024-10-11 18:54:17,666 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-10-11 13:54:45] 2024-10-11 18:54:17,666 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-10-11 13:54:45] 2024-10-11 18:54:17,684 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-11 13:54:45] 2024-10-11 18:54:25,369 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-11 13:54:45] 2024-10-11 18:54:25,372 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6361901314/memory_monitor_summary.json (trf name=prmon)
[2024-10-11 13:54:45] 2024-10-11 18:54:25,373 | INFO     | extracted standard info from prmon json
[2024-10-11 13:54:45] 2024-10-11 18:54:25,373 | INFO     | extracted standard memory fields from prmon json
[2024-10-11 13:54:45] 2024-10-11 18:54:25,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-11 13:54:45] 2024-10-11 18:54:25,374 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-11 13:54:45] 2024-10-11 18:54:25,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | fitting pss+swap vs Time
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | model: linear, x: [1728668595.0, 1728668656.0, 1728668717.0, 1728668778.0, 1728668839.0, 1728668900.0, 1728668961.0, 1728669022.0, 1728669083.0, 1728669144.0, 1728
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | sum of square deviations: 97479037.0
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | sum of deviations: 7032205507.499998
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | mean x: 1728670638.5
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | mean y: 2499870.1029411764
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | -- intersect: -124705001956.29732
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | intersect: -124705001956.29732
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | chi2: 1.9428629086778761
[2024-10-11 13:54:45] 2024-10-11 18:54:25,375 | INFO     | -- intersect: -124705001956.29732
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | current memory leak: 72.14 B/s (using 68 data points, chi2=1.94)
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | ..............................
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | . Timing measurements:
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | . get job = 0 s
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | . initial setup = 3 s
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | . payload setup = 2 s
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | . stage-in = 0 s
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | . payload execution = 4565 s
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | . stage-out = 0 s
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | . log creation = 0 s
[2024-10-11 13:54:45] 2024-10-11 18:54:25,376 | INFO     | ..............................
[2024-10-11 13:54:45] 2024-10-11 18:54:25,418 | INFO     | 
[2024-10-11 13:54:45] 2024-10-11 18:54:25,419 | WARNING  | process 1289578 is no longer using CPU - aborting
[2024-10-11 13:54:45] 2024-10-11 18:54:25,419 | INFO     | job summary report
[2024-10-11 13:54:45] 2024-10-11 18:54:25,419 | INFO     | aborting job monitoring since job object (job id=6361901314) has expired
[2024-10-11 13:54:45] 2024-10-11 18:54:25,419 | INFO     | --------------------------------------------------
[2024-10-11 13:54:45] 2024-10-11 18:54:25,419 | INFO     | PanDA job id: 6361901314
[2024-10-11 13:54:45] 2024-10-11 18:54:25,419 | INFO     | task id: 41079486
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | errors: (none)
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | pilot state: finished 
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | transexitcode: 0
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | exeerrorcode: 0
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | exeerrordiag: 
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | exitcode: 0
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | exitmsg: OK
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | cpuconsumptiontime: 14913 s
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | nevents: 400
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | neventsw: 0
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | pid: 1289578
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | pgrp: 1289578
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | corecount: 4
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | event service: False
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | sizes: {0: 2437292, 2: 2437498, 11: 2437526, 4571: 2463570, 4572: 2472664, 4580: 2472778}
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | --------------------------------------------------
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | 
[2024-10-11 13:54:45] 2024-10-11 18:54:25,420 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-10-11 13:54:45] 2024-10-11 18:54:25,432 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-11 13:54:45] 2024-10-11 18:54:25,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,434 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-11 13:54:45] 2024-10-11 18:54:25,434 | INFO     | job 6361901314 has completed (purged errors)
[2024-10-11 13:54:45] 2024-10-11 18:54:25,434 | INFO     | overall cleanup function is called
[2024-10-11 13:54:45] 2024-10-11 18:54:26,440 | INFO     | --- collectZombieJob: --- 10, [1289578]
[2024-10-11 13:54:45] 2024-10-11 18:54:26,440 | INFO     | zombie collector waiting for pid 1289578
[2024-10-11 13:54:45] 2024-10-11 18:54:26,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-11 13:54:45] 2024-10-11 18:54:26,441 | INFO     | collected zombie processes
[2024-10-11 13:54:45] 2024-10-11 18:54:26,441 | INFO     | will  attempt to kill all subprocesses of pid=1289578
[2024-10-11 13:54:45] 2024-10-11 18:54:26,479 | INFO     | process IDs to be killed: [1289578] (in reverse order)
[2024-10-11 13:54:45] 2024-10-11 18:54:26,502 | WARNING  | found no corresponding commands to process id(s)
[2024-10-11 13:54:45] 2024-10-11 18:54:26,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-11 13:54:45] 2024-10-11 18:54:26,503 | INFO     | did not find any defunct processes belonging to 1289578
[2024-10-11 13:54:45] 2024-10-11 18:54:26,504 | INFO     | did not find any defunct processes belonging to 1289578
[2024-10-11 13:54:45] 2024-10-11 18:54:26,504 | INFO     | ready for new job
[2024-10-11 13:54:45] 2024-10-11 18:54:26,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-11 13:54:45] 2024-10-11 18:54:26,505 | INFO     | *************************************
[2024-10-11 13:54:45] 2024-10-11 18:54:26,505 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-11 13:54:45] 2024-10-11 18:54:26,505 | INFO     | *************************************
[2024-10-11 13:54:45] 2024-10-11 18:54:26,505 | INFO     | 
[2024-10-11 13:54:45] 2024-10-11 18:54:26,506 | INFO     | architecture information:
[2024-10-11 13:54:45] 2024-10-11 18:54:26,506 | INFO     | executing command: cat /etc/os-release
[2024-10-11 13:54:45] 2024-10-11 18:54:26,514 | INFO     | cat /etc/os-release:
[2024-10-11 13:54:45] NAME="CentOS Linux"
[2024-10-11 13:54:45] VERSION="7 (Core)"
[2024-10-11 13:54:45] ID="centos"
[2024-10-11 13:54:45] ID_LIKE="rhel fedora"
[2024-10-11 13:54:45] VERSION_ID="7"
[2024-10-11 13:54:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-11 13:54:45] ANSI_COLOR="0;31"
[2024-10-11 13:54:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-11 13:54:45] HOME_URL="https://www.centos.org/"
[2024-10-11 13:54:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-11 13:54:45] 
[2024-10-11 13:54:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-11 13:54:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-11 13:54:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-11 13:54:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-11 13:54:45] 
[2024-10-11 13:54:45] 2024-10-11 18:54:26,514 | INFO     | *************************************
[2024-10-11 13:54:45] 2024-10-11 18:54:27,017 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-10-11 13:54:45] 2024-10-11 18:54:27,036 | INFO     | sufficient remaining disk space (82839601152 B)
[2024-10-11 13:54:45] 2024-10-11 18:54:27,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-11 13:54:45] 2024-10-11 18:54:27,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-11 13:54:45] 2024-10-11 18:54:27,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-11 13:54:45] 2024-10-11 18:54:27,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-11 13:54:45] 2024-10-11 18:54:27,037 | INFO     | aborting loop
[2024-10-11 13:54:45] 2024-10-11 18:54:27,171 | INFO     | found 0 job(s) in 20 queues
[2024-10-11 13:54:45] 2024-10-11 18:54:27,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-11 13:54:45] 2024-10-11 18:54:27,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-11 13:54:45] 2024-10-11 18:54:27,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-11 13:54:45] 2024-10-11 18:54:27,750 | INFO     | all data control threads have been joined
[2024-10-11 13:54:45] 2024-10-11 18:54:27,880 | INFO     | all payload control threads have been joined
[2024-10-11 13:54:45] 2024-10-11 18:54:28,042 | INFO     | [job] retrieve thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:28,043 | INFO     | [job] queue monitor thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:28,043 | INFO     | [job] job monitor thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:28,078 | INFO     | [payload] validate_pre thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:28,163 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-11 13:54:45] 2024-10-11 18:54:28,187 | INFO     | all job control threads have been joined
[2024-10-11 13:54:45] 2024-10-11 18:54:28,248 | INFO     | [payload] execute_payloads thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:28,542 | INFO     | [data] copytool_in thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:28,756 | INFO     | [data] control thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:28,882 | INFO     | [payload] control thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:28,980 | INFO     | [payload] failed_post thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:28,984 | INFO     | [payload] validate_post thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:29,140 | INFO     | [job] validate thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:29,191 | INFO     | [job] control thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:29,342 | INFO     | [job] create_data_payload thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:29,682 | INFO     | [data] copytool_out thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:32,170 | INFO     | [data] queue_monitor thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:38,039 | INFO     | job.realtimelogging is not enabled
[2024-10-11 13:54:45] 2024-10-11 18:54:39,044 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-11 13:54:45] 2024-10-11 18:54:40,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692552439616)>', '<ExcThread(monitor, started 139692158723840)>']
[2024-10-11 13:54:45] 2024-10-11 18:54:41,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-11 13:54:45] 2024-10-11 18:54:41,238 | INFO     | [monitor] control thread has ended
[2024-10-11 13:54:45] 2024-10-11 18:54:45,547 | INFO     | all workflow threads have been joined
[2024-10-11 13:54:45] 2024-10-11 18:54:45,547 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-11 13:54:45] 2024-10-11 18:54:45,548 | INFO     | traces error code: 0
[2024-10-11 13:54:45] 2024-10-11 18:54:45,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-11 13:54:45] 2024-10-11 18:54:45,606 [wrapper] ==== pilot stdout END ====
[2024-10-11 13:54:45] 2024-10-11 18:54:45,608 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-11 13:54:45] 2024-10-11 18:54:45,609 [wrapper] pilotpid: 1283212
[2024-10-11 13:54:45] 2024-10-11 18:54:45,611 [wrapper] Pilot exit status: 0
[2024-10-11 13:54:45] 2024-10-11 18:54:45,617 [wrapper] pandaids: 6361901314
[2024-10-11 13:54:45] 2024-10-11 18:54:45,629 [wrapper] cleanup supervisor_pilot 1301591 1283213
[2024-10-11 13:54:45] 2024-10-11 18:54:45,630 [wrapper] Test setup, not cleaning
[2024-10-11 13:54:45] 2024-10-11 18:54:45,632 [wrapper] ==== wrapper stdout END ====
[2024-10-11 13:54:45] 2024-10-11 18:54:45,634 [wrapper] ==== wrapper stderr END ====
[2024-10-11 13:54:45] 2024-10-11 18:54:45,637 [wrapper] apfmon messages muted
[2024-10-11 13:54:45]  *** Error codes and diagnostics ***
[2024-10-11 13:54:45]     "exeErrorCode": 0,
[2024-10-11 13:54:45]     "exeErrorDiag": "",
[2024-10-11 13:54:45]     "pilotErrorCode": 0,
[2024-10-11 13:54:45]     "pilotErrorDiag": "",
[2024-10-11 13:54:45]  *** Listing of results directory ***
[2024-10-11 13:54:45] total 590200
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc    484599 Oct 10 15:17 pilot3.tar.gz
[2024-10-11 13:54:45] -rwx------ 1 boinc boinc     33946 Oct 10 16:00 runpilot2-wrapper.sh
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc      5653 Oct 10 16:00 queuedata.json
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc       100 Oct 11 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-11 13:54:45] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 12:37 run_atlas
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc       105 Oct 11 12:37 job.xml
[2024-10-11 13:54:45] -rw-r--r-- 2 boinc boinc     17537 Oct 11 12:37 start_atlas.sh
[2024-10-11 13:54:45] drwxrwx--x 2 boinc boinc      4096 Oct 11 12:37 shared
[2024-10-11 13:54:45] -rw-r--r-- 2 boinc boinc    498196 Oct 11 12:37 input.tar.gz
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc      6539 Oct 11 12:37 init_data.xml
[2024-10-11 13:54:45] -rw-r--r-- 2 boinc boinc 441433502 Oct 11 12:37 EVNT.41079484._000007.pool.root.1
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc         0 Oct 11 12:37 boinc_lockfile
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc      2573 Oct 11 12:37 pandaJob.out
[2024-10-11 13:54:45] -rw------- 1 boinc boinc       424 Oct 11 12:37 setup.sh.local
[2024-10-11 13:54:45] -rw------- 1 boinc boinc   1031004 Oct 11 12:37 agis_schedconf.cvmfs.json
[2024-10-11 13:54:45] -rw------- 1 boinc boinc   1617228 Oct 11 12:37 agis_ddmendpoints.agis.ALL.json
[2024-10-11 13:54:45] drwx------ 4 boinc boinc      4096 Oct 11 12:37 pilot3
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc       530 Oct 11 13:53 boinc_task_state.xml
[2024-10-11 13:54:45] -rw------- 1 boinc boinc 157712133 Oct 11 13:53 HITS.41079486._000151.pool.root.1
[2024-10-11 13:54:45] -rw------- 1 boinc boinc        95 Oct 11 13:54 pilot_heartbeat.json
[2024-10-11 13:54:45] -rw------- 1 boinc boinc      1014 Oct 11 13:54 memory_monitor_summary.json
[2024-10-11 13:54:45] -rw------- 1 boinc boinc    224568 Oct 11 13:54 log.41079486._000151.job.log.tgz.1
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc      8192 Oct 11 13:54 boinc_mmap_file
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc        27 Oct 11 13:54 wrapper_checkpoint.txt
[2024-10-11 13:54:45] -rw------- 1 boinc boinc      7652 Oct 11 13:54 heartbeat.json
[2024-10-11 13:54:45] -rw------- 1 boinc boinc      4290 Oct 11 13:54 pilotlog.txt
[2024-10-11 13:54:45] -rw------- 1 boinc boinc    448236 Oct 11 13:54 log.41079486._000151.job.log.1
[2024-10-11 13:54:45] -rw------- 1 boinc boinc       357 Oct 11 13:54 output.list
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc       620 Oct 11 13:54 runtime_log
[2024-10-11 13:54:45] -rw------- 1 boinc boinc    696320 Oct 11 13:54 result.tar.gz
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc     11060 Oct 11 13:54 runtime_log.err
[2024-10-11 13:54:45] -rw------- 1 boinc boinc       624 Oct 11 13:54 bAdKDm9RFJ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmye1KDmV4m3Hm.diag
[2024-10-11 13:54:45] -rw-r--r-- 1 boinc boinc     21217 Oct 11 13:54 stderr.txt
[2024-10-11 13:54:45] HITS file was successfully produced:
[2024-10-11 13:54:45] -rw------- 1 boinc boinc 157712133 Oct 11 13:53 shared/HITS.pool.root.1
[2024-10-11 13:54:45]  *** Contents of shared directory: ***
[2024-10-11 13:54:45] total 586300
[2024-10-11 13:54:45] -rw-r--r-- 2 boinc boinc     17537 Oct 11 12:37 start_atlas.sh
[2024-10-11 13:54:45] -rw-r--r-- 2 boinc boinc    498196 Oct 11 12:37 input.tar.gz
[2024-10-11 13:54:45] -rw-r--r-- 2 boinc boinc 441433502 Oct 11 12:37 ATLAS.root_0
[2024-10-11 13:54:45] -rw------- 1 boinc boinc 157712133 Oct 11 13:53 HITS.pool.root.1
[2024-10-11 13:54:45] -rw------- 1 boinc boinc    696320 Oct 11 13:54 result.tar.gz
13:54:46 (1279585): run_atlas exited; CPU time 14916.711501
13:54:46 (1279585): called boinc_finish(0)

</stderr_txt>
]]>

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