Name BgiMDmntCJ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmBG1KDmWKgWFo_0
Workunit 225964700
Created 10 Oct 2024, 18:17:18 UTC
Sent 10 Oct 2024, 20:08:28 UTC
Report deadline 18 Oct 2024, 20:08:28 UTC
Received 11 Oct 2024, 18:40:40 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10860686
Run time 1 hours 27 min 15 sec
CPU time 4 hours 49 min 7 sec
Validate state Valid
Credit 484.78
Device peak FLOPS 4.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.27 GB
Peak swap size 4.95 GB
Peak disk usage 743.05 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
11:10:27 (1254982): wrapper (7.7.26015): starting
11:10:27 (1254982): wrapper: running run_atlas (--nthreads 4)
[2024-10-11 11:10:27] Arguments: --nthreads 4
[2024-10-11 11:10:27] Threads: 4
[2024-10-11 11:10:27] Checking for CVMFS
[2024-10-11 11:10:27] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-11 11:10:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-11 11:10:27] Running cvmfs_config stat atlas.cern.ch
[2024-10-11 11:10:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-11 11:10:28] 2.11.5.0 1131365 440 57864 138215 0 56 2733358 4096001 0 130560 0 476765 99.989 173998 6236 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-11 11:10:28] CVMFS is ok
[2024-10-11 11:10:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-11 11:10:28] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-11 11:10:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-11 11:10:28] Further information can be found at the LHC@home message board.
[2024-10-11 11:10:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-11 11:10:28] Checking for apptainer binary...
[2024-10-11 11:10:28] apptainer is not installed, using version from CVMFS
[2024-10-11 11:10:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-11 11:10:28] tower
[2024-10-11 11:10:28] apptainer works
[2024-10-11 11:10:28] Set ATHENA_PROC_NUMBER=4
[2024-10-11 11:10:28] Set ATHENA_CORE_NUMBER=4
[2024-10-11 11:10:28] Starting ATLAS job with PandaID=6362858287
[2024-10-11 11:10:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-11 12:37:39]  *** The last 200 lines of the pilot log: ***
[2024-10-11 12:37:39]  protocol_id=None
[2024-10-11 12:37:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-11 12:37:39]  replicas=None
[2024-10-11 12:37:39]  scope=mc23_13p6TeV
[2024-10-11 12:37:39]  status=None
[2024-10-11 12:37:39]  status_code=0
[2024-10-11 12:37:39]  storage_token=
[2024-10-11 12:37:39]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6362858287/log.41481167._046490.job.log.tgz.1
[2024-10-11 12:37:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/7e/log.41481167._046490.job.log.tgz.1
[2024-10-11 12:37:39]  workdir=None
[2024-10-11 12:37:39] ]
[2024-10-11 12:37:39] 2024-10-11 17:37:14,392 | INFO     | transferring file log.41481167._046490.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6362858287/log.41481167._046490.job.log.tgz.1 to /var/lib/boinc
[2024-10-11 12:37:39] 2024-10-11 17:37:14,392 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6362858287/log.41481167._046490.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.414811
[2024-10-11 12:37:39] 2024-10-11 17:37:14,403 | INFO     | adding to output.list: log.41481167._046490.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/7e/log.41481167._046490.job.log.tg
[2024-10-11 12:37:39] 2024-10-11 17:37:14,404 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-11 12:37:39] 2024-10-11 17:37:14,404 | INFO     | summary of transferred files:
[2024-10-11 12:37:39] 2024-10-11 17:37:14,404 | INFO     |  -- lfn=log.41481167._046490.job.log.tgz.1, status_code=0, status=transferred
[2024-10-11 12:37:39] 2024-10-11 17:37:14,404 | INFO     | stage-out finished correctly
[2024-10-11 12:37:39] 2024-10-11 17:37:16,680 | INFO     | monitor loop #404: job 0:6362858287 is in state 'finished'
[2024-10-11 12:37:39] 2024-10-11 17:37:16,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-11 12:37:39] 2024-10-11 17:37:17,712 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-11 12:37:39] 2024-10-11 17:37:19,184 | INFO     | monitor loop #405: job 0:6362858287 is in state 'finished'
[2024-10-11 12:37:39] 2024-10-11 17:37:19,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-11 12:37:39] 2024-10-11 17:37:20,355 | INFO     | job 6362858287 has state=finished
[2024-10-11 12:37:39] 2024-10-11 17:37:20,356 | INFO     | preparing for final server update for job 6362858287 in state='finished'
[2024-10-11 12:37:39] 2024-10-11 17:37:20,356 | INFO     | this job has now completed (state=finished)
[2024-10-11 12:37:39] 2024-10-11 17:37:20,356 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-11 12:37:39] 2024-10-11 17:37:20,357 | INFO     | log transfer has been attempted: DONE
[2024-10-11 12:37:39] 2024-10-11 17:37:20,357 | INFO     | job 6362858287 has finished - writing final server update
[2024-10-11 12:37:39] 2024-10-11 17:37:20,357 | INFO     | total number of processed events: 400 (read)
[2024-10-11 12:37:39] 2024-10-11 17:37:20,359 | INFO     | executing command: lscpu
[2024-10-11 12:37:39] 2024-10-11 17:37:20,380 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-10-11 12:37:39] 2024-10-11 17:37:20,381 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-10-11 12:37:39] 2024-10-11 17:37:20,413 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-11 12:37:39] 2024-10-11 17:37:21,686 | INFO     | monitor loop #406: job 0:6362858287 is in state 'finished'
[2024-10-11 12:37:39] 2024-10-11 17:37:21,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-11 12:37:39] 2024-10-11 17:37:24,189 | INFO     | monitor loop #407: job 0:6362858287 is in state 'finished'
[2024-10-11 12:37:39] 2024-10-11 17:37:24,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-11 12:37:39] 2024-10-11 17:37:26,689 | INFO     | monitor loop #408: job 0:6362858287 is in state 'finished'
[2024-10-11 12:37:39] 2024-10-11 17:37:26,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-11 12:37:39] 2024-10-11 17:37:27,111 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-11 12:37:39] 2024-10-11 17:37:27,111 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6362858287/memory_monitor_summary.json (trf name=prmon)
[2024-10-11 12:37:39] 2024-10-11 17:37:27,111 | INFO     | extracted standard info from prmon json
[2024-10-11 12:37:39] 2024-10-11 17:37:27,111 | INFO     | extracted standard memory fields from prmon json
[2024-10-11 12:37:39] 2024-10-11 17:37:27,111 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-11 12:37:39] 2024-10-11 17:37:27,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-11 12:37:39] 2024-10-11 17:37:27,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | fitting pss+swap vs Time
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | model: linear, x: [1728663362.0, 1728663423.0, 1728663484.0, 1728663545.0, 1728663606.0, 1728663667.0, 1728663728.0, 1728663789.0, 1728663850.0, 1728663911.0, 1728
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | sum of square deviations: 147126479.5
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | sum of deviations: 20327667084.0
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | mean x: 1728665710.5
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | mean y: 2338595.9487179485
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | -- intersect: -238838019591.03775
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | intersect: -238838019591.03775
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | chi2: 2.381362457480572
[2024-10-11 12:37:39] 2024-10-11 17:37:27,113 | INFO     | -- intersect: -238838019591.03775
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | current memory leak: 138.16 B/s (using 78 data points, chi2=2.38)
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | ..............................
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | . Timing measurements:
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | . get job = 0 s
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | . initial setup = 3 s
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | . payload setup = 3 s
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | . stage-in = 0 s
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | . payload execution = 5175 s
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | . stage-out = 0 s
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | . log creation = 0 s
[2024-10-11 12:37:39] 2024-10-11 17:37:27,114 | INFO     | ..............................
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | 
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | job summary report
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | --------------------------------------------------
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | PanDA job id: 6362858287
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | task id: 41481167
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | errors: (none)
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | pilot state: finished 
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | transexitcode: 0
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | exeerrorcode: 0
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | exeerrordiag: 
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | exitcode: 0
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | exitmsg: OK
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | cpuconsumptiontime: 17343 s
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | nevents: 400
[2024-10-11 12:37:39] 2024-10-11 17:37:27,155 | INFO     | neventsw: 0
[2024-10-11 12:37:39] 2024-10-11 17:37:27,156 | INFO     | pid: 1264976
[2024-10-11 12:37:39] 2024-10-11 17:37:27,156 | INFO     | pgrp: 1264976
[2024-10-11 12:37:39] 2024-10-11 17:37:27,156 | INFO     | corecount: 4
[2024-10-11 12:37:39] 2024-10-11 17:37:27,156 | INFO     | event service: False
[2024-10-11 12:37:39] 2024-10-11 17:37:27,156 | INFO     | sizes: {0: 2437175, 2: 2437381, 11: 2437409, 5182: 2463753, 5183: 2463752, 5184: 2472846, 5187: 2473030, 5197: 2473200}
[2024-10-11 12:37:39] 2024-10-11 17:37:27,156 | INFO     | --------------------------------------------------
[2024-10-11 12:37:39] 2024-10-11 17:37:27,156 | INFO     | 
[2024-10-11 12:37:39] 2024-10-11 17:37:27,156 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-10-11 12:37:39] 2024-10-11 17:37:27,167 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,167 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,167 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,167 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | job 6362858287 has completed (purged errors)
[2024-10-11 12:37:39] 2024-10-11 17:37:27,168 | INFO     | overall cleanup function is called
[2024-10-11 12:37:39] 2024-10-11 17:37:28,175 | INFO     | --- collectZombieJob: --- 10, [1264976]
[2024-10-11 12:37:39] 2024-10-11 17:37:28,175 | INFO     | zombie collector waiting for pid 1264976
[2024-10-11 12:37:39] 2024-10-11 17:37:28,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-11 12:37:39] 2024-10-11 17:37:28,175 | INFO     | collected zombie processes
[2024-10-11 12:37:39] 2024-10-11 17:37:28,175 | INFO     | will  attempt to kill all subprocesses of pid=1264976
[2024-10-11 12:37:39] 2024-10-11 17:37:28,224 | INFO     | process IDs to be killed: [1264976] (in reverse order)
[2024-10-11 12:37:39] 2024-10-11 17:37:28,250 | WARNING  | found no corresponding commands to process id(s)
[2024-10-11 12:37:39] 2024-10-11 17:37:28,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-11 12:37:39] 2024-10-11 17:37:28,251 | INFO     | did not find any defunct processes belonging to 1264976
[2024-10-11 12:37:39] 2024-10-11 17:37:28,252 | INFO     | did not find any defunct processes belonging to 1264976
[2024-10-11 12:37:39] 2024-10-11 17:37:28,252 | INFO     | ready for new job
[2024-10-11 12:37:39] 2024-10-11 17:37:28,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-11 12:37:39] 2024-10-11 17:37:28,253 | INFO     | *************************************
[2024-10-11 12:37:39] 2024-10-11 17:37:28,253 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-11 12:37:39] 2024-10-11 17:37:28,253 | INFO     | *************************************
[2024-10-11 12:37:39] 2024-10-11 17:37:28,253 | INFO     | 
[2024-10-11 12:37:39] 2024-10-11 17:37:28,254 | INFO     | architecture information:
[2024-10-11 12:37:39] 2024-10-11 17:37:28,254 | INFO     | executing command: cat /etc/os-release
[2024-10-11 12:37:39] 2024-10-11 17:37:28,262 | INFO     | cat /etc/os-release:
[2024-10-11 12:37:39] NAME="CentOS Linux"
[2024-10-11 12:37:39] VERSION="7 (Core)"
[2024-10-11 12:37:39] ID="centos"
[2024-10-11 12:37:39] ID_LIKE="rhel fedora"
[2024-10-11 12:37:39] VERSION_ID="7"
[2024-10-11 12:37:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-11 12:37:39] ANSI_COLOR="0;31"
[2024-10-11 12:37:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-11 12:37:39] HOME_URL="https://www.centos.org/"
[2024-10-11 12:37:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-11 12:37:39] 
[2024-10-11 12:37:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-11 12:37:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-11 12:37:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-11 12:37:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-11 12:37:39] 
[2024-10-11 12:37:39] 2024-10-11 17:37:28,263 | INFO     | *************************************
[2024-10-11 12:37:39] 2024-10-11 17:37:28,766 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-10-11 12:37:39] 2024-10-11 17:37:28,784 | INFO     | sufficient remaining disk space (82670780416 B)
[2024-10-11 12:37:39] 2024-10-11 17:37:28,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-11 12:37:39] 2024-10-11 17:37:28,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-11 12:37:39] 2024-10-11 17:37:28,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-11 12:37:39] 2024-10-11 17:37:28,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-11 12:37:39] 2024-10-11 17:37:29,193 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-11 12:37:39] 2024-10-11 17:37:29,193 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-11 12:37:39] 2024-10-11 17:37:29,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-11 12:37:39] 2024-10-11 17:37:29,194 | INFO     | will abort loop
[2024-10-11 12:37:39] 2024-10-11 17:37:29,289 | INFO     | all job control threads have been joined
[2024-10-11 12:37:39] 2024-10-11 17:37:29,482 | INFO     | found 0 job(s) in 20 queues
[2024-10-11 12:37:39] 2024-10-11 17:37:29,482 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-11 12:37:39] 2024-10-11 17:37:29,482 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-11 12:37:39] 2024-10-11 17:37:29,791 | INFO     | [job] retrieve thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:29,791 | INFO     | [job] queue monitor thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:29,806 | INFO     | all data control threads have been joined
[2024-10-11 12:37:39] 2024-10-11 17:37:29,956 | INFO     | [payload] validate_post thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:29,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-11 12:37:39] 2024-10-11 17:37:30,008 | INFO     | all payload control threads have been joined
[2024-10-11 12:37:39] 2024-10-11 17:37:30,199 | INFO     | [job] job monitor thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:30,266 | INFO     | [payload] execute_payloads thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:30,295 | INFO     | [job] control thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:30,322 | INFO     | [data] copytool_in thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:30,795 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:30,811 | INFO     | [data] control thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:30,830 | INFO     | [job] create_data_payload thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:30,857 | INFO     | [payload] validate_pre thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:30,946 | INFO     | [job] validate thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:31,014 | INFO     | [payload] control thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:31,235 | INFO     | [payload] failed_post thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:31,967 | INFO     | [data] copytool_out thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:32,792 | INFO     | [data] queue_monitor thread has finished
[2024-10-11 12:37:39] 2024-10-11 17:37:34,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736709252928)>', '<ExcThread(monitor, started 139735888557824)>']
[2024-10-11 12:37:39] 2024-10-11 17:37:34,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-11 12:37:39] 2024-10-11 17:37:34,503 | INFO     | [monitor] control thread has ended
[2024-10-11 12:37:39] 2024-10-11 17:37:39,472 | INFO     | all workflow threads have been joined
[2024-10-11 12:37:39] 2024-10-11 17:37:39,473 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-11 12:37:39] 2024-10-11 17:37:39,473 | INFO     | traces error code: 0
[2024-10-11 12:37:39] 2024-10-11 17:37:39,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-11 12:37:39] 2024-10-11 17:37:39,533 [wrapper] ==== pilot stdout END ====
[2024-10-11 12:37:39] 2024-10-11 17:37:39,535 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-11 12:37:39] 2024-10-11 17:37:39,537 [wrapper] pilotpid: 1258611
[2024-10-11 12:37:39] 2024-10-11 17:37:39,538 [wrapper] Pilot exit status: 0
[2024-10-11 12:37:39] 2024-10-11 17:37:39,544 [wrapper] pandaids: 6362858287
[2024-10-11 12:37:39] 2024-10-11 17:37:39,555 [wrapper] cleanup supervisor_pilot 1276995 1258612
[2024-10-11 12:37:39] 2024-10-11 17:37:39,556 [wrapper] Test setup, not cleaning
[2024-10-11 12:37:39] 2024-10-11 17:37:39,558 [wrapper] ==== wrapper stdout END ====
[2024-10-11 12:37:39] 2024-10-11 17:37:39,559 [wrapper] ==== wrapper stderr END ====
[2024-10-11 12:37:39] 2024-10-11 17:37:39,562 [wrapper] apfmon messages muted
[2024-10-11 12:37:39]  *** Error codes and diagnostics ***
[2024-10-11 12:37:39]     "exeErrorCode": 0,
[2024-10-11 12:37:39]     "exeErrorDiag": "",
[2024-10-11 12:37:39]     "pilotErrorCode": 0,
[2024-10-11 12:37:39]     "pilotErrorDiag": "",
[2024-10-11 12:37:39]  *** Listing of results directory ***
[2024-10-11 12:37:39] total 462192
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc    484599 Oct 10 13:01 pilot3.tar.gz
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc      5653 Oct 10 13:16 queuedata.json
[2024-10-11 12:37:39] -rwx------ 1 boinc boinc     33942 Oct 10 13:17 runpilot2-wrapper.sh
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc       100 Oct 11 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-11 12:37:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 11:10 run_atlas
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc       105 Oct 11 11:10 job.xml
[2024-10-11 12:37:39] -rw-r--r-- 2 boinc boinc     17537 Oct 11 11:10 start_atlas.sh
[2024-10-11 12:37:39] drwxrwx--x 2 boinc boinc      4096 Oct 11 11:10 shared
[2024-10-11 12:37:39] -rw-r--r-- 2 boinc boinc    498195 Oct 11 11:10 input.tar.gz
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc      6539 Oct 11 11:10 init_data.xml
[2024-10-11 12:37:39] -rw-r--r-- 2 boinc boinc 310691370 Oct 11 11:10 EVNT.41239421._000842.pool.root.1
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc         0 Oct 11 11:10 boinc_lockfile
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc      2457 Oct 11 11:10 pandaJob.out
[2024-10-11 12:37:39] -rw------- 1 boinc boinc       424 Oct 11 11:10 setup.sh.local
[2024-10-11 12:37:39] -rw------- 1 boinc boinc   1030678 Oct 11 11:10 agis_schedconf.cvmfs.json
[2024-10-11 12:37:39] -rw------- 1 boinc boinc   1617228 Oct 11 11:10 agis_ddmendpoints.agis.ALL.json
[2024-10-11 12:37:39] drwx------ 4 boinc boinc      4096 Oct 11 11:10 pilot3
[2024-10-11 12:37:39] -rw------- 1 boinc boinc 157219450 Oct 11 12:36 HITS.41481167._046490.pool.root.1
[2024-10-11 12:37:39] -rw------- 1 boinc boinc        95 Oct 11 12:37 pilot_heartbeat.json
[2024-10-11 12:37:39] -rw------- 1 boinc boinc      1017 Oct 11 12:37 memory_monitor_summary.json
[2024-10-11 12:37:39] -rw------- 1 boinc boinc    247105 Oct 11 12:37 log.41481167._046490.job.log.tgz.1
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc      8192 Oct 11 12:37 boinc_mmap_file
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc        27 Oct 11 12:37 wrapper_checkpoint.txt
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc       529 Oct 11 12:37 boinc_task_state.xml
[2024-10-11 12:37:39] -rw------- 1 boinc boinc      7663 Oct 11 12:37 heartbeat.json
[2024-10-11 12:37:39] -rw------- 1 boinc boinc      4404 Oct 11 12:37 pilotlog.txt
[2024-10-11 12:37:39] -rw------- 1 boinc boinc    501400 Oct 11 12:37 log.41481167._046490.job.log.1
[2024-10-11 12:37:39] -rw------- 1 boinc boinc       357 Oct 11 12:37 output.list
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc       620 Oct 11 12:37 runtime_log
[2024-10-11 12:37:39] -rw------- 1 boinc boinc    768000 Oct 11 12:37 result.tar.gz
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc     11060 Oct 11 12:37 runtime_log.err
[2024-10-11 12:37:39] -rw------- 1 boinc boinc       626 Oct 11 12:37 BgiMDmntCJ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmBG1KDmWKgWFo.diag
[2024-10-11 12:37:39] -rw-r--r-- 1 boinc boinc     22007 Oct 11 12:37 stderr.txt
[2024-10-11 12:37:39] HITS file was successfully produced:
[2024-10-11 12:37:39] -rw------- 1 boinc boinc 157219450 Oct 11 12:36 shared/HITS.pool.root.1
[2024-10-11 12:37:39]  *** Contents of shared directory: ***
[2024-10-11 12:37:39] total 458216
[2024-10-11 12:37:39] -rw-r--r-- 2 boinc boinc     17537 Oct 11 11:10 start_atlas.sh
[2024-10-11 12:37:39] -rw-r--r-- 2 boinc boinc    498195 Oct 11 11:10 input.tar.gz
[2024-10-11 12:37:39] -rw-r--r-- 2 boinc boinc 310691370 Oct 11 11:10 ATLAS.root_0
[2024-10-11 12:37:39] -rw------- 1 boinc boinc 157219450 Oct 11 12:36 HITS.pool.root.1
[2024-10-11 12:37:39] -rw------- 1 boinc boinc    768000 Oct 11 12:37 result.tar.gz
12:37:40 (1254982): run_atlas exited; CPU time 17347.894376
12:37:40 (1254982): called boinc_finish(0)

</stderr_txt>
]]>


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