Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
08:11:35 (1205689): wrapper (7.7.26015): starting
08:11:35 (1205689): wrapper: running run_atlas (--nthreads 4)
[2024-10-11 08:11:35] Arguments: --nthreads 4
[2024-10-11 08:11:35] Threads: 4
[2024-10-11 08:11:35] Checking for CVMFS
[2024-10-11 08:11:35] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-11 08:11:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-11 08:11:35] Running cvmfs_config stat atlas.cern.ch
[2024-10-11 08:11:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-11 08:11:35] 2.11.5.0 1131365 261 56832 138208 2 56 2569065 4096001 0 130560 0 285186 99.987 113479 6893 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-11 08:11:35] CVMFS is ok
[2024-10-11 08:11:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-11 08:11:35] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-11 08:11:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-11 08:11:35] Further information can be found at the LHC@home message board.
[2024-10-11 08:11:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-11 08:11:35] Checking for apptainer binary...
[2024-10-11 08:11:35] apptainer is not installed, using version from CVMFS
[2024-10-11 08:11:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-11 08:11:36] tower
[2024-10-11 08:11:36] apptainer works
[2024-10-11 08:11:36] Set ATHENA_PROC_NUMBER=4
[2024-10-11 08:11:36] Set ATHENA_CORE_NUMBER=4
[2024-10-11 08:11:36] Starting ATLAS job with PandaID=6362652672
[2024-10-11 08:11:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-11 09:41:56]  *** The last 200 lines of the pilot log: ***
[2024-10-11 09:41:56]  is_tar=False
[2024-10-11 09:41:56]  lfn=log.41481167._045044.job.log.tgz.1
[2024-10-11 09:41:56]  mtime=0
[2024-10-11 09:41:56]  protocol_id=None
[2024-10-11 09:41:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-11 09:41:56]  replicas=None
[2024-10-11 09:41:56]  scope=mc23_13p6TeV
[2024-10-11 09:41:56]  status=None
[2024-10-11 09:41:56]  status_code=0
[2024-10-11 09:41:56]  storage_token=
[2024-10-11 09:41:56]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6362652672/log.41481167._045044.job.log.tgz.1
[2024-10-11 09:41:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/23/log.41481167._045044.job.log.tgz.1
[2024-10-11 09:41:56]  workdir=None
[2024-10-11 09:41:56] ]
[2024-10-11 09:41:56] 2024-10-11 14:41:26,616 | INFO     | transferring file log.41481167._045044.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6362652672/log.41481167._045044.job.log.tgz.1 to /var/lib/boinc
[2024-10-11 09:41:56] 2024-10-11 14:41:26,616 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6362652672/log.41481167._045044.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.414811
[2024-10-11 09:41:56] 2024-10-11 14:41:26,627 | INFO     | adding to output.list: log.41481167._045044.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/23/log.41481167._045044.job.log.tg
[2024-10-11 09:41:56] 2024-10-11 14:41:26,628 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-11 09:41:56] 2024-10-11 14:41:26,628 | INFO     | summary of transferred files:
[2024-10-11 09:41:56] 2024-10-11 14:41:26,628 | INFO     |  -- lfn=log.41481167._045044.job.log.tgz.1, status_code=0, status=transferred
[2024-10-11 09:41:56] 2024-10-11 14:41:26,628 | INFO     | stage-out finished correctly
[2024-10-11 09:41:56] 2024-10-11 14:41:28,873 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-11 09:41:56] 2024-10-11 14:41:28,914 | INFO     | job 6362652672 has state=finished
[2024-10-11 09:41:56] 2024-10-11 14:41:28,914 | INFO     | preparing for final server update for job 6362652672 in state='finished'
[2024-10-11 09:41:56] 2024-10-11 14:41:28,917 | INFO     | this job has now completed (state=finished)
[2024-10-11 09:41:56] 2024-10-11 14:41:28,917 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-11 09:41:56] 2024-10-11 14:41:28,917 | INFO     | log transfer has been attempted: DONE
[2024-10-11 09:41:56] 2024-10-11 14:41:28,917 | INFO     | job 6362652672 has finished - writing final server update
[2024-10-11 09:41:56] 2024-10-11 14:41:28,917 | INFO     | total number of processed events: 400 (read)
[2024-10-11 09:41:56] 2024-10-11 14:41:28,919 | INFO     | executing command: lscpu
[2024-10-11 09:41:56] 2024-10-11 14:41:28,937 | WARNING  | process 1215680 is no longer using CPU - aborting
[2024-10-11 09:41:56] 2024-10-11 14:41:28,949 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-10-11 09:41:56] 2024-10-11 14:41:28,949 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-10-11 09:41:56] 2024-10-11 14:41:28,966 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-11 09:41:56] 2024-10-11 14:41:31,440 | INFO     | monitor loop #417: job 0:6362652672 is in state 'finished'
[2024-10-11 09:41:56] 2024-10-11 14:41:31,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-11 09:41:56] 2024-10-11 14:41:33,942 | INFO     | monitor loop #418: job 0:6362652672 is in state 'finished'
[2024-10-11 09:41:56] 2024-10-11 14:41:33,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-11 09:41:56] 2024-10-11 14:41:36,445 | INFO     | monitor loop #419: job 0:6362652672 is in state 'finished'
[2024-10-11 09:41:56] 2024-10-11 14:41:36,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-11 09:41:56] 2024-10-11 14:41:37,026 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-11 09:41:56] 2024-10-11 14:41:37,026 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6362652672/memory_monitor_summary.json (trf name=prmon)
[2024-10-11 09:41:56] 2024-10-11 14:41:37,027 | INFO     | extracted standard info from prmon json
[2024-10-11 09:41:56] 2024-10-11 14:41:37,027 | INFO     | extracted standard memory fields from prmon json
[2024-10-11 09:41:56] 2024-10-11 14:41:37,027 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-11 09:41:56] 2024-10-11 14:41:37,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-11 09:41:56] 2024-10-11 14:41:37,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-11 09:41:56] 2024-10-11 14:41:37,028 | INFO     | fitting pss+swap vs Time
[2024-10-11 09:41:56] 2024-10-11 14:41:37,028 | INFO     | model: linear, x: [1728652627.0, 1728652688.0, 1728652749.0, 1728652810.0, 1728652871.0, 1728652932.0, 1728652993.0, 1728653054.0, 1728653115.0, 1728653176.0, 1728
[2024-10-11 09:41:56] 2024-10-11 14:41:37,028 | INFO     | sum of square deviations: 164765880.0
[2024-10-11 09:41:56] 2024-10-11 14:41:37,028 | INFO     | sum of deviations: 16044226344.0
[2024-10-11 09:41:56] 2024-10-11 14:41:37,028 | INFO     | mean x: 1728655067.0
[2024-10-11 09:41:56] 2024-10-11 14:41:37,028 | INFO     | mean y: 2320316.7283950616
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | -- intersect: -168327027759.7695
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | intersect: -168327027759.7695
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | chi2: 1.5919599139827554
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | -- intersect: -168327027759.7695
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | current memory leak: 97.38 B/s (using 81 data points, chi2=1.59)
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | ..............................
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | . Timing measurements:
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | . get job = 0 s
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | . initial setup = 3 s
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | . payload setup = 2 s
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | . stage-in = 0 s
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | . payload execution = 5362 s
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | . stage-out = 0 s
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | . log creation = 0 s
[2024-10-11 09:41:56] 2024-10-11 14:41:37,029 | INFO     | ..............................
[2024-10-11 09:41:56] 2024-10-11 14:41:37,490 | INFO     | 
[2024-10-11 09:41:56] 2024-10-11 14:41:37,490 | INFO     | job summary report
[2024-10-11 09:41:56] 2024-10-11 14:41:37,490 | INFO     | --------------------------------------------------
[2024-10-11 09:41:56] 2024-10-11 14:41:37,490 | INFO     | PanDA job id: 6362652672
[2024-10-11 09:41:56] 2024-10-11 14:41:37,490 | INFO     | task id: 41481167
[2024-10-11 09:41:56] 2024-10-11 14:41:37,490 | INFO     | errors: (none)
[2024-10-11 09:41:56] 2024-10-11 14:41:37,490 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | pilot state: finished 
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | transexitcode: 0
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | exeerrorcode: 0
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | exeerrordiag: 
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | exitcode: 0
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | exitmsg: OK
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | cpuconsumptiontime: 18013 s
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | nevents: 400
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | neventsw: 0
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | pid: 1215680
[2024-10-11 09:41:56] 2024-10-11 14:41:37,491 | INFO     | pgrp: 1215680
[2024-10-11 09:41:56] 2024-10-11 14:41:37,492 | INFO     | corecount: 4
[2024-10-11 09:41:56] 2024-10-11 14:41:37,492 | INFO     | event service: False
[2024-10-11 09:41:56] 2024-10-11 14:41:37,492 | INFO     | sizes: {0: 2437126, 2: 2437332, 11: 2437360, 5368: 2463760, 5369: 2472798, 5372: 2472854, 5380: 2473152}
[2024-10-11 09:41:56] 2024-10-11 14:41:37,492 | INFO     | --------------------------------------------------
[2024-10-11 09:41:56] 2024-10-11 14:41:37,492 | INFO     | 
[2024-10-11 09:41:56] 2024-10-11 14:41:37,492 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-10-11 09:41:56] 2024-10-11 14:41:37,506 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,506 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,507 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-11 09:41:56] 2024-10-11 14:41:37,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,508 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-11 09:41:56] 2024-10-11 14:41:37,508 | INFO     | job 6362652672 has completed (purged errors)
[2024-10-11 09:41:56] 2024-10-11 14:41:37,508 | INFO     | overall cleanup function is called
[2024-10-11 09:41:56] 2024-10-11 14:41:38,515 | INFO     | --- collectZombieJob: --- 10, [1215680]
[2024-10-11 09:41:56] 2024-10-11 14:41:38,515 | INFO     | zombie collector waiting for pid 1215680
[2024-10-11 09:41:56] 2024-10-11 14:41:38,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-11 09:41:56] 2024-10-11 14:41:38,516 | INFO     | collected zombie processes
[2024-10-11 09:41:56] 2024-10-11 14:41:38,516 | INFO     | will  attempt to kill all subprocesses of pid=1215680
[2024-10-11 09:41:56] 2024-10-11 14:41:38,564 | INFO     | process IDs to be killed: [1215680] (in reverse order)
[2024-10-11 09:41:56] 2024-10-11 14:41:38,590 | WARNING  | found no corresponding commands to process id(s)
[2024-10-11 09:41:56] 2024-10-11 14:41:38,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-11 09:41:56] 2024-10-11 14:41:38,591 | INFO     | did not find any defunct processes belonging to 1215680
[2024-10-11 09:41:56] 2024-10-11 14:41:38,592 | INFO     | did not find any defunct processes belonging to 1215680
[2024-10-11 09:41:56] 2024-10-11 14:41:38,592 | INFO     | ready for new job
[2024-10-11 09:41:56] 2024-10-11 14:41:38,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-11 09:41:56] 2024-10-11 14:41:38,593 | INFO     | *************************************
[2024-10-11 09:41:56] 2024-10-11 14:41:38,593 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-11 09:41:56] 2024-10-11 14:41:38,593 | INFO     | *************************************
[2024-10-11 09:41:56] 2024-10-11 14:41:38,593 | INFO     | 
[2024-10-11 09:41:56] 2024-10-11 14:41:38,594 | INFO     | architecture information:
[2024-10-11 09:41:56] 2024-10-11 14:41:38,594 | INFO     | executing command: cat /etc/os-release
[2024-10-11 09:41:56] 2024-10-11 14:41:38,602 | INFO     | cat /etc/os-release:
[2024-10-11 09:41:56] NAME="CentOS Linux"
[2024-10-11 09:41:56] VERSION="7 (Core)"
[2024-10-11 09:41:56] ID="centos"
[2024-10-11 09:41:56] ID_LIKE="rhel fedora"
[2024-10-11 09:41:56] VERSION_ID="7"
[2024-10-11 09:41:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-11 09:41:56] ANSI_COLOR="0;31"
[2024-10-11 09:41:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-11 09:41:56] HOME_URL="https://www.centos.org/"
[2024-10-11 09:41:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-11 09:41:56] 
[2024-10-11 09:41:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-11 09:41:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-11 09:41:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-11 09:41:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-11 09:41:56] 
[2024-10-11 09:41:56] 2024-10-11 14:41:38,602 | INFO     | *************************************
[2024-10-11 09:41:56] 2024-10-11 14:41:39,105 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-10-11 09:41:56] 2024-10-11 14:41:39,125 | INFO     | sufficient remaining disk space (82202066944 B)
[2024-10-11 09:41:56] 2024-10-11 14:41:39,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-11 09:41:56] 2024-10-11 14:41:39,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-11 09:41:56] 2024-10-11 14:41:39,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-11 09:41:56] 2024-10-11 14:41:39,426 | INFO     | found 0 job(s) in 20 queues
[2024-10-11 09:41:56] 2024-10-11 14:41:39,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-11 09:41:56] 2024-10-11 14:41:39,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-11 09:41:56] 2024-10-11 14:41:39,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-11 09:41:56] 2024-10-11 14:41:39,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-11 09:41:56] 2024-10-11 14:41:39,955 | INFO     | aborting loop
[2024-10-11 09:41:56] 2024-10-11 14:41:40,131 | INFO     | [job] retrieve thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:40,162 | INFO     | [job] validate thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:40,192 | INFO     | all data control threads have been joined
[2024-10-11 09:41:56] 2024-10-11 14:41:40,250 | INFO     | [payload] execute_payloads thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:40,526 | INFO     | all payload control threads have been joined
[2024-10-11 09:41:56] 2024-10-11 14:41:40,591 | INFO     | all job control threads have been joined
[2024-10-11 09:41:56] 2024-10-11 14:41:40,716 | INFO     | [data] copytool_in thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:40,958 | INFO     | [job] job monitor thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:40,958 [wrapper] supervise_pilot (15 min periods counter: 7)
[2024-10-11 09:41:56] 2024-10-11 14:41:41,193 | INFO     | [payload] validate_post thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:41,198 | INFO     | [data] control thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:41,365 | INFO     | [job] create_data_payload thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:41,441 | INFO     | [payload] failed_post thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:41,514 | INFO     | [payload] validate_pre thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:41,531 | INFO     | [payload] control thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:41,597 | INFO     | [job] control thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:41,691 | INFO     | [data] copytool_out thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:42,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-11 09:41:56] 2024-10-11 14:41:43,087 | INFO     | [job] queue monitor thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:43,430 | INFO     | [data] queue_monitor thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:50,090 | INFO     | job.realtimelogging is not enabled
[2024-10-11 09:41:56] 2024-10-11 14:41:51,095 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-11 09:41:56] 2024-10-11 14:41:51,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974188898112)>', '<ExcThread(monitor, started 139973521045248)>']
[2024-10-11 09:41:56] 2024-10-11 14:41:51,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-11 09:41:56] 2024-10-11 14:41:51,488 | INFO     | [monitor] control thread has ended
[2024-10-11 09:41:56] 2024-10-11 14:41:56,287 | INFO     | all workflow threads have been joined
[2024-10-11 09:41:56] 2024-10-11 14:41:56,287 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-11 09:41:56] 2024-10-11 14:41:56,287 | INFO     | traces error code: 0
[2024-10-11 09:41:56] 2024-10-11 14:41:56,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-11 09:41:56] 2024-10-11 14:41:56,345 [wrapper] ==== pilot stdout END ====
[2024-10-11 09:41:56] 2024-10-11 14:41:56,346 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-11 09:41:56] 2024-10-11 14:41:56,348 [wrapper] pilotpid: 1209314
[2024-10-11 09:41:56] 2024-10-11 14:41:56,349 [wrapper] Pilot exit status: 0
[2024-10-11 09:41:56] 2024-10-11 14:41:56,355 [wrapper] pandaids: 6362652672
[2024-10-11 09:41:56] 2024-10-11 14:41:56,367 [wrapper] cleanup supervisor_pilot 1230322 1209315
[2024-10-11 09:41:56] 2024-10-11 14:41:56,368 [wrapper] Test setup, not cleaning
[2024-10-11 09:41:56] 2024-10-11 14:41:56,369 [wrapper] ==== wrapper stdout END ====
[2024-10-11 09:41:56] 2024-10-11 14:41:56,371 [wrapper] ==== wrapper stderr END ====
[2024-10-11 09:41:56] 2024-10-11 14:41:56,373 [wrapper] apfmon messages muted
[2024-10-11 09:41:56]  *** Error codes and diagnostics ***
[2024-10-11 09:41:56]     "exeErrorCode": 0,
[2024-10-11 09:41:56]     "exeErrorDiag": "",
[2024-10-11 09:41:56]     "pilotErrorCode": 0,
[2024-10-11 09:41:56]     "pilotErrorDiag": "",
[2024-10-11 09:41:56]  *** Listing of results directory ***
[2024-10-11 09:41:56] total 471356
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc    484599 Oct 10 10:37 pilot3.tar.gz
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc      5653 Oct 10 10:53 queuedata.json
[2024-10-11 09:41:56] -rwx------ 1 boinc boinc     33942 Oct 10 10:54 runpilot2-wrapper.sh
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc       100 Oct 11 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-11 09:41:56] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 08:11 run_atlas
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc       105 Oct 11 08:11 job.xml
[2024-10-11 09:41:56] -rw-r--r-- 2 boinc boinc     17537 Oct 11 08:11 start_atlas.sh
[2024-10-11 09:41:56] drwxrwx--x 2 boinc boinc      4096 Oct 11 08:11 shared
[2024-10-11 09:41:56] -rw-r--r-- 2 boinc boinc    498201 Oct 11 08:11 input.tar.gz
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc      6539 Oct 11 08:11 init_data.xml
[2024-10-11 09:41:56] -rw-r--r-- 2 boinc boinc 311166670 Oct 11 08:11 EVNT.41239421._001184.pool.root.1
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc         0 Oct 11 08:11 boinc_lockfile
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc      2457 Oct 11 08:11 pandaJob.out
[2024-10-11 09:41:56] -rw------- 1 boinc boinc       424 Oct 11 08:11 setup.sh.local
[2024-10-11 09:41:56] -rw------- 1 boinc boinc   1030539 Oct 11 08:11 agis_schedconf.cvmfs.json
[2024-10-11 09:41:56] -rw------- 1 boinc boinc   1617228 Oct 11 08:11 agis_ddmendpoints.agis.ALL.json
[2024-10-11 09:41:56] drwx------ 4 boinc boinc      4096 Oct 11 08:11 pilot3
[2024-10-11 09:41:56] -rw------- 1 boinc boinc 166090141 Oct 11 09:41 HITS.41481167._045044.pool.root.1
[2024-10-11 09:41:56] -rw------- 1 boinc boinc        95 Oct 11 09:41 pilot_heartbeat.json
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc       529 Oct 11 09:41 boinc_task_state.xml
[2024-10-11 09:41:56] -rw------- 1 boinc boinc      1017 Oct 11 09:41 memory_monitor_summary.json
[2024-10-11 09:41:56] -rw------- 1 boinc boinc    254157 Oct 11 09:41 log.41481167._045044.job.log.tgz.1
[2024-10-11 09:41:56] -rw------- 1 boinc boinc      7664 Oct 11 09:41 heartbeat.json
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc      8192 Oct 11 09:41 boinc_mmap_file
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc        27 Oct 11 09:41 wrapper_checkpoint.txt
[2024-10-11 09:41:56] -rw------- 1 boinc boinc      4290 Oct 11 09:41 pilotlog.txt
[2024-10-11 09:41:56] -rw------- 1 boinc boinc    515004 Oct 11 09:41 log.41481167._045044.job.log.1
[2024-10-11 09:41:56] -rw------- 1 boinc boinc       357 Oct 11 09:41 output.list
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc       620 Oct 11 09:41 runtime_log
[2024-10-11 09:41:56] -rw------- 1 boinc boinc    788480 Oct 11 09:41 result.tar.gz
[2024-10-11 09:41:56] -rw------- 1 boinc boinc       626 Oct 11 09:41 x5jMDmafAJ6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmYr0KDmnfseEm.diag
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc     11060 Oct 11 09:41 runtime_log.err
[2024-10-11 09:41:56] -rw-r--r-- 1 boinc boinc     21677 Oct 11 09:41 stderr.txt
[2024-10-11 09:41:56] HITS file was successfully produced:
[2024-10-11 09:41:56] -rw------- 1 boinc boinc 166090141 Oct 11 09:41 shared/HITS.pool.root.1
[2024-10-11 09:41:56]  *** Contents of shared directory: ***
[2024-10-11 09:41:56] total 467360
[2024-10-11 09:41:56] -rw-r--r-- 2 boinc boinc     17537 Oct 11 08:11 start_atlas.sh
[2024-10-11 09:41:56] -rw-r--r-- 2 boinc boinc    498201 Oct 11 08:11 input.tar.gz
[2024-10-11 09:41:56] -rw-r--r-- 2 boinc boinc 311166670 Oct 11 08:11 ATLAS.root_0
[2024-10-11 09:41:56] -rw------- 1 boinc boinc 166090141 Oct 11 09:41 HITS.pool.root.1
[2024-10-11 09:41:56] -rw------- 1 boinc boinc    788480 Oct 11 09:41 result.tar.gz
09:41:58 (1205689): run_atlas exited; CPU time 18016.986259
09:41:58 (1205689): called boinc_finish(0)

</stderr_txt>
]]>

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