Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:22:29 (6804): wrapper (7.7.26015): starting
07:22:29 (6804): wrapper: running run_atlas (--nthreads 8)
[2024-10-11 07:22:29] Arguments: --nthreads 8
[2024-10-11 07:22:29] Threads: 8
[2024-10-11 07:22:29] Checking for CVMFS
[2024-10-11 07:22:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-11 07:22:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-11 07:22:30] Running cvmfs_config stat atlas.cern.ch
[2024-10-11 07:22:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-11 07:22:31] 2.11.2.0 21911 65390 82240 138198 1 59 16627880 25165824 3956 130560 0 43680806 99.938 23297879 8619 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-11 07:22:31] CVMFS is ok
[2024-10-11 07:22:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-11 07:22:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-11 07:22:31] Further information can be found at the LHC@home message board.
[2024-10-11 07:22:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-11 07:22:31] Checking for apptainer binary...
[2024-10-11 07:22:31] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-11 07:22:31] Running /usr/bin/apptainer --version
[2024-10-11 07:22:31] apptainer version 1.3.2-1.el7
[2024-10-11 07:22:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-11 07:22:36] cg-vwn401.simple-grid.lan
[2024-10-11 07:22:36] apptainer works
[2024-10-11 07:22:36] Set ATHENA_PROC_NUMBER=8
[2024-10-11 07:22:36] Set ATHENA_CORE_NUMBER=8
[2024-10-11 07:22:37] Starting ATLAS job with PandaID=6362158717
[2024-10-11 07:22:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-11 11:24:04]  *** The last 200 lines of the pilot log: ***
[2024-10-11 11:24:04] 2024-10-11 09:04:49,910 | INFO     | sum of square deviations: 2593916542.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,911 | INFO     | sum of deviations: 110370135097.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,912 | INFO     | mean x: 1728630925.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,912 | INFO     | mean y: 2397192.512315271
[2024-10-11 11:24:04] 2024-10-11 09:04:49,912 | INFO     | -- intersect: -73550173075.61086
[2024-10-11 11:24:04] 2024-10-11 09:04:49,912 | INFO     | intersect: -73550173075.61086
[2024-10-11 11:24:04] 2024-10-11 09:04:49,912 | INFO     | chi2: 6.1219826163511755
[2024-10-11 11:24:04] 2024-10-11 09:04:49,912 | INFO     | current chi2=6.1219826163511755 (change=10.593631445955788 %)
[2024-10-11 11:24:04] 2024-10-11 09:04:49,912 | INFO     | right removable region: 202
[2024-10-11 11:24:04] 2024-10-11 09:04:49,913 | INFO     | model: linear, x: [1728625069.0, 1728625130.0, 1728625191.0, 1728625252.0, 1728625313.0, 1728625374.0, 1728625435.0, 1728625496.0, 1728625557.0, 1728625618.0, 1728
[2024-10-11 11:24:04] 2024-10-11 09:04:49,913 | INFO     | sum of square deviations: 2593916542.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,923 | INFO     | sum of deviations: 37982072181.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,923 | INFO     | mean x: 1728631230.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,923 | INFO     | mean y: 2436388.8128078817
[2024-10-11 11:24:04] 2024-10-11 09:04:49,923 | INFO     | -- intersect: -25309479044.506023
[2024-10-11 11:24:04] 2024-10-11 09:04:49,923 | INFO     | intersect: -25309479044.506023
[2024-10-11 11:24:04] 2024-10-11 09:04:49,924 | INFO     | chi2: 3.0465387173343714
[2024-10-11 11:24:04] 2024-10-11 09:04:49,924 | INFO     | current chi2=3.0465387173343714 (change=55.50788356558486 %)
[2024-10-11 11:24:04] 2024-10-11 09:04:49,924 | INFO     | model: linear, x: [1728625374.0, 1728625435.0, 1728625496.0, 1728625557.0, 1728625618.0, 1728625679.0, 1728625740.0, 1728625801.0, 1728625862.0, 1728625923.0, 1728
[2024-10-11 11:24:04] 2024-10-11 09:04:49,925 | INFO     | sum of square deviations: 2406926989.5
[2024-10-11 11:24:04] 2024-10-11 09:04:49,926 | INFO     | sum of deviations: 247793681.5000038
[2024-10-11 11:24:04] 2024-10-11 09:04:49,926 | INFO     | mean x: 1728631382.5
[2024-10-11 11:24:04] 2024-10-11 09:04:49,926 | INFO     | mean y: 2467148.1363636362
[2024-10-11 11:24:04] 2024-10-11 09:04:49,926 | INFO     | -- intersect: -175495846.21067214
[2024-10-11 11:24:04] 2024-10-11 09:04:49,927 | INFO     | intersect: -175495846.21067214
[2024-10-11 11:24:04] 2024-10-11 09:04:49,927 | INFO     | chi2: 1.7181946982909748
[2024-10-11 11:24:04] 2024-10-11 09:04:49,927 | INFO     | current chi2=1.7181946982909748 (change=43.601744218292986 %)
[2024-10-11 11:24:04] 2024-10-11 09:04:49,927 | INFO     | model: linear, x: [1728625679.0, 1728625740.0, 1728625801.0, 1728625862.0, 1728625923.0, 1728625984.0, 1728626045.0, 1728626106.0, 1728626167.0, 1728626228.0, 1728
[2024-10-11 11:24:04] 2024-10-11 09:04:49,928 | INFO     | sum of square deviations: 2229146912.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,929 | INFO     | sum of deviations: -26460103041.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,929 | INFO     | mean x: 1728631535.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,929 | INFO     | mean y: 2489936.9430051814
[2024-10-11 11:24:04] 2024-10-11 09:04:49,929 | INFO     | -- intersect: 20521446444.38292
[2024-10-11 11:24:04] 2024-10-11 09:04:49,930 | INFO     | intersect: 20521446444.38292
[2024-10-11 11:24:04] 2024-10-11 09:04:49,930 | INFO     | chi2: 0.917225057855184
[2024-10-11 11:24:04] 2024-10-11 09:04:49,930 | INFO     | current chi2=0.917225057855184 (change=46.61693120299381 %)
[2024-10-11 11:24:04] 2024-10-11 09:04:49,930 | INFO     | model: linear, x: [1728625984.0, 1728626045.0, 1728626106.0, 1728626167.0, 1728626228.0, 1728626289.0, 1728626350.0, 1728626411.0, 1728626472.0, 1728626533.0, 1728
[2024-10-11 11:24:04] 2024-10-11 09:04:49,930 | INFO     | sum of square deviations: 2060343747.0
[2024-10-11 11:24:04] 2024-10-11 09:04:49,932 | INFO     | sum of deviations: -24289045574.999996
[2024-10-11 11:24:04] 2024-10-11 09:04:49,932 | INFO     | mean x: 1728631687.5
[2024-10-11 11:24:04] 2024-10-11 09:04:49,932 | INFO     | mean y: 2487918.3936170214
[2024-10-11 11:24:04] 2024-10-11 09:04:49,932 | INFO     | -- intersect: 20381035867.594955
[2024-10-11 11:24:04] 2024-10-11 09:04:49,932 | INFO     | intersect: 20381035867.594955
[2024-10-11 11:24:04] 2024-10-11 09:04:49,933 | INFO     | chi2: 0.8974723146206114
[2024-10-11 11:24:04] 2024-10-11 09:04:49,933 | INFO     | current chi2=0.8974723146206114 (change=2.153532883277521 %)
[2024-10-11 11:24:04] 2024-10-11 09:04:49,933 | INFO     | left removable region: 40
[2024-10-11 11:24:04] 2024-10-11 09:04:49,933 | INFO     | model: linear, x: [1728627204.0, 1728627265.0, 1728627326.0, 1728627387.0, 1728627448.0, 1728627509.0, 1728627570.0, 1728627631.0, 1728627692.0, 1728627753.0, 1728
[2024-10-11 11:24:04] 2024-10-11 09:04:49,933 | INFO     | sum of square deviations: 1318277740.5
[2024-10-11 11:24:04] 2024-10-11 09:04:49,934 | INFO     | sum of deviations: 3477352701.9999995
[2024-10-11 11:24:04] 2024-10-11 09:04:49,934 | INFO     | mean x: 1728632114.5
[2024-10-11 11:24:04] 2024-10-11 09:04:49,934 | INFO     | mean y: 2484209.037037037
[2024-10-11 11:24:04] 2024-10-11 09:04:49,934 | INFO     | -- intersect: -4557301160.501749
[2024-10-11 11:24:04] 2024-10-11 09:04:49,935 | INFO     | intersect: -4557301160.501749
[2024-10-11 11:24:04] 2024-10-11 09:04:49,935 | INFO     | chi2: 0.00037186779879194183
[2024-10-11 11:24:04] 2024-10-11 09:04:49,935 | INFO     | -- intersect: -4557301160.501749
[2024-10-11 11:24:04] 2024-10-11 09:04:49,935 | INFO     | current memory leak: 2.64 B/s (using 162 data points, chi2=0.00)
[2024-10-11 11:24:04] 2024-10-11 09:04:49,936 | INFO     | ..............................
[2024-10-11 11:24:04] 2024-10-11 09:04:49,936 | INFO     | . Timing measurements:
[2024-10-11 11:24:04] 2024-10-11 09:04:49,936 | INFO     | . get job = 0 s
[2024-10-11 11:24:04] 2024-10-11 09:04:49,936 | INFO     | . initial setup = 3 s
[2024-10-11 11:24:04] 2024-10-11 09:04:49,936 | INFO     | . payload setup = 116 s
[2024-10-11 11:24:04] 2024-10-11 09:04:49,936 | INFO     | . stage-in = 0 s
[2024-10-11 11:24:04] 2024-10-11 09:04:49,936 | INFO     | . payload execution = 12794 s
[2024-10-11 11:24:04] 2024-10-11 09:04:49,936 | INFO     | . stage-out = 3 s
[2024-10-11 11:24:04] 2024-10-11 09:04:49,937 | INFO     | . log creation = 1 s
[2024-10-11 11:24:04] 2024-10-11 09:04:49,937 | INFO     | ..............................
[2024-10-11 11:24:04] 2024-10-11 09:04:50,231 | INFO     | 
[2024-10-11 11:24:04] 2024-10-11 09:04:50,232 | INFO     | job summary report
[2024-10-11 11:24:04] 2024-10-11 09:04:50,232 | INFO     | --------------------------------------------------
[2024-10-11 11:24:04] 2024-10-11 09:04:50,232 | INFO     | PanDA job id: 6362158717
[2024-10-11 11:24:04] 2024-10-11 09:04:50,232 | INFO     | task id: 41481167
[2024-10-11 11:24:04] 2024-10-11 09:04:50,232 | INFO     | errors: (none)
[2024-10-11 11:24:04] 2024-10-11 09:04:50,232 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-11 11:24:04] 2024-10-11 09:04:50,232 | INFO     | pilot state: finished 
[2024-10-11 11:24:04] 2024-10-11 09:04:50,233 | INFO     | transexitcode: 0
[2024-10-11 11:24:04] 2024-10-11 09:04:50,233 | INFO     | exeerrorcode: 0
[2024-10-11 11:24:04] 2024-10-11 09:04:50,233 | INFO     | exeerrordiag: 
[2024-10-11 11:24:04] 2024-10-11 09:04:50,233 | INFO     | exitcode: 0
[2024-10-11 11:24:04] 2024-10-11 09:04:50,233 | INFO     | exitmsg: OK
[2024-10-11 11:24:04] 2024-10-11 09:04:50,233 | INFO     | cpuconsumptiontime: 45528 s
[2024-10-11 11:24:04] 2024-10-11 09:04:50,233 | INFO     | nevents: 400
[2024-10-11 11:24:04] 2024-10-11 09:04:50,233 | INFO     | neventsw: 0
[2024-10-11 11:24:04] 2024-10-11 09:04:50,233 | INFO     | pid: 20890
[2024-10-11 11:24:04] 2024-10-11 09:04:50,234 | INFO     | pgrp: 20890
[2024-10-11 11:24:04] 2024-10-11 09:04:50,234 | INFO     | corecount: 8
[2024-10-11 11:24:04] 2024-10-11 09:04:50,234 | INFO     | event service: False
[2024-10-11 11:24:04] 2024-10-11 09:04:50,234 | INFO     | sizes: {0: 2436940, 1: 2437195, 12: 2437195, 23: 2437223, 34: 2437251, 44: 2437279, 55: 2437435, 66: 2437463, 75: 2437697, 76: 2437725, 12914: 2467599, 12919: 2476
[2024-10-11 11:24:04] 2024-10-11 09:04:50,234 | INFO     | --------------------------------------------------
[2024-10-11 11:24:04] 2024-10-11 09:04:50,234 | INFO     | 
[2024-10-11 11:24:04] 2024-10-11 09:04:50,234 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-10-11 11:24:04] 2024-10-11 09:04:50,699 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,699 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,699 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,700 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,701 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-11 11:24:04] 2024-10-11 09:04:50,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,702 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-11 11:24:04] 2024-10-11 09:04:50,702 | INFO     | job 6362158717 has completed (purged errors)
[2024-10-11 11:24:04] 2024-10-11 09:04:50,702 | INFO     | overall cleanup function is called
[2024-10-11 11:24:04] 2024-10-11 09:04:51,711 | INFO     | --- collectZombieJob: --- 10, [20890]
[2024-10-11 11:24:04] 2024-10-11 09:04:51,712 | INFO     | zombie collector waiting for pid 20890
[2024-10-11 11:24:04] 2024-10-11 09:04:51,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-11 11:24:04] 2024-10-11 09:04:51,712 | INFO     | collected zombie processes
[2024-10-11 11:24:04] 2024-10-11 09:04:51,712 | INFO     | will  attempt to kill all subprocesses of pid=20890
[2024-10-11 11:24:04] 2024-10-11 09:04:52,712 | INFO     | process IDs to be killed: [20890] (in reverse order)
[2024-10-11 11:24:04] 2024-10-11 09:04:53,680 | WARNING  | found no corresponding commands to process id(s)
[2024-10-11 11:24:04] 2024-10-11 09:04:53,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-11 11:24:04] 2024-10-11 09:04:53,684 | INFO     | did not find any defunct processes belonging to 20890
[2024-10-11 11:24:04] 2024-10-11 09:04:53,687 | INFO     | did not find any defunct processes belonging to 20890
[2024-10-11 11:24:04] 2024-10-11 09:04:53,687 | INFO     | ready for new job
[2024-10-11 11:24:04] 2024-10-11 09:04:53,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-11 11:24:04] 2024-10-11 09:04:53,689 | INFO     | *************************************
[2024-10-11 11:24:04] 2024-10-11 09:04:53,690 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-11 11:24:04] 2024-10-11 09:04:53,690 | INFO     | *************************************
[2024-10-11 11:24:04] 2024-10-11 09:04:53,690 | INFO     | 
[2024-10-11 11:24:04] 2024-10-11 09:04:53,691 | INFO     | pilot is running in a VM
[2024-10-11 11:24:04] 2024-10-11 09:04:53,691 | INFO     | architecture information:
[2024-10-11 11:24:04] 2024-10-11 09:04:53,707 | INFO     | executing command: cat /etc/os-release
[2024-10-11 11:24:04] 2024-10-11 09:04:54,055 | INFO     | cat /etc/os-release:
[2024-10-11 11:24:04] NAME="CentOS Linux"
[2024-10-11 11:24:04] VERSION="7 (Core)"
[2024-10-11 11:24:04] ID="centos"
[2024-10-11 11:24:04] ID_LIKE="rhel fedora"
[2024-10-11 11:24:04] VERSION_ID="7"
[2024-10-11 11:24:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-11 11:24:04] ANSI_COLOR="0;31"
[2024-10-11 11:24:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-11 11:24:04] HOME_URL="https://www.centos.org/"
[2024-10-11 11:24:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-11 11:24:04] 
[2024-10-11 11:24:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-11 11:24:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-11 11:24:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-11 11:24:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-11 11:24:04] 
[2024-10-11 11:24:04] 2024-10-11 09:04:54,055 | INFO     | *************************************
[2024-10-11 11:24:04] 2024-10-11 09:04:54,559 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-10-11 11:24:04] 2024-10-11 09:04:54,849 | INFO     | sufficient remaining disk space (492579061760 B)
[2024-10-11 11:24:04] 2024-10-11 09:04:54,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-11 11:24:04] 2024-10-11 09:04:54,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-11 11:24:04] 2024-10-11 09:04:54,854 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-11 11:24:04] 2024-10-11 09:04:54,855 | INFO     | found 0 job(s) in 20 queues
[2024-10-11 11:24:04] 2024-10-11 09:04:54,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-11 11:24:04] 2024-10-11 09:04:54,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-11 11:24:04] 2024-10-11 09:04:54,902 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-11 11:24:04] 2024-10-11 09:04:54,903 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-11 11:24:04] 2024-10-11 09:04:54,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-11 11:24:04] 2024-10-11 09:04:54,903 | INFO     | will abort loop
[2024-10-11 11:24:04] 2024-10-11 09:04:54,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-11 11:24:04] 2024-10-11 09:04:55,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-11 11:24:04] 2024-10-11 09:04:55,261 | INFO     | all data control threads have been joined
[2024-10-11 11:24:04] 2024-10-11 09:04:55,380 | INFO     | all payload control threads have been joined
[2024-10-11 11:24:04] 2024-10-11 09:04:55,855 | INFO     | [job] retrieve thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:55,908 | INFO     | [job] job monitor thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,040 | INFO     | [payload] execute_payloads thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,142 | INFO     | [job] queue monitor thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,267 | INFO     | [data] control thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,386 | INFO     | [payload] control thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,432 | INFO     | all job control threads have been joined
[2024-10-11 11:24:04] 2024-10-11 09:04:56,506 | INFO     | [data] copytool_in thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,515 | INFO     | [job] validate thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-11 11:24:04] 2024-10-11 09:04:56,534 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,622 | INFO     | [payload] failed_post thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,635 | INFO     | [job] create_data_payload thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:56,917 | INFO     | [data] copytool_out thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:57,277 | INFO     | [payload] validate_pre thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:57,405 | INFO     | [payload] validate_post thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:04:57,438 | INFO     | [job] control thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:05:00,540 | INFO     | [data] queue_monitor thread has finished
[2024-10-11 11:24:04] 2024-10-11 09:05:02,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536645031744)>', '<ExcThread(monitor, started 140536186906368)>']
[2024-10-11 11:24:04] 2024-10-11 09:05:02,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-11 11:24:04] 2024-10-11 09:05:02,903 | INFO     | [monitor] control thread has ended
[2024-10-11 11:24:04] 2024-10-11 09:05:07,028 | INFO     | all workflow threads have been joined
[2024-10-11 11:24:04] 2024-10-11 09:05:07,029 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-11 11:24:04] 2024-10-11 09:05:07,029 | INFO     | traces error code: 0
[2024-10-11 11:24:04] 2024-10-11 09:05:07,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-11 11:24:04] 2024-10-11 09:05:07,418 [wrapper] ==== pilot stdout END ====
[2024-10-11 11:24:04] 2024-10-11 09:05:07,513 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-11 11:24:04] 2024-10-11 09:05:07,622 [wrapper] pilotpid: 11290
[2024-10-11 11:24:04] 2024-10-11 09:05:07,688 [wrapper] Pilot exit status: 0
[2024-10-11 11:24:04] 2024-10-11 09:05:08,102 [wrapper] pandaids: 6362158717
[2024-10-11 11:24:04] 2024-10-11 09:05:08,769 [wrapper] cleanup supervisor_pilot  6445 11291
[2024-10-11 11:24:04] 2024-10-11 09:05:08,865 [wrapper] Test setup, not cleaning
[2024-10-11 11:24:04] 2024-10-11 09:05:08,956 [wrapper] ==== wrapper stdout END ====
[2024-10-11 11:24:04] 2024-10-11 09:05:09,078 [wrapper] ==== wrapper stderr END ====
[2024-10-11 11:24:04] 2024-10-11 09:05:09,100 [wrapper] apfmon messages muted
[2024-10-11 11:24:04]  *** Error codes and diagnostics ***
[2024-10-11 11:24:04]     "exeErrorCode": 0,
[2024-10-11 11:24:04]     "exeErrorDiag": "",
[2024-10-11 11:24:04]     "pilotErrorCode": 0,
[2024-10-11 11:24:04]     "pilotErrorDiag": "",
[2024-10-11 11:24:04]  *** Listing of results directory ***
[2024-10-11 11:24:04] total 464048
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc    484599 Oct 10 07:19 pilot3.tar.gz
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc      5653 Oct 10 07:58 queuedata.json
[2024-10-11 11:24:04] -rwx------. 1 boinc boinc     33942 Oct 10 08:01 runpilot2-wrapper.sh
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc       100 Oct 11 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-11 11:24:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 07:22 run_atlas
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc       105 Oct 11 07:22 job.xml
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc      6346 Oct 11 07:22 init_data.xml
[2024-10-11 11:24:04] -rw-r--r--. 2 boinc boinc 308581693 Oct 11 07:22 EVNT.41239421._000655.pool.root.1
[2024-10-11 11:24:04] -rw-r--r--. 2 boinc boinc     17537 Oct 11 07:22 start_atlas.sh
[2024-10-11 11:24:04] drwxrwx--x. 2 boinc boinc        68 Oct 11 07:22 shared
[2024-10-11 11:24:04] -rw-r--r--. 2 boinc boinc    498208 Oct 11 07:22 input.tar.gz
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc         0 Oct 11 07:22 boinc_lockfile
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc      2456 Oct 11 07:22 pandaJob.out
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc       424 Oct 11 07:22 setup.sh.local
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc   1031969 Oct 11 07:25 agis_schedconf.cvmfs.json
[2024-10-11 11:24:04] drwx------. 4 boinc boinc      4096 Oct 11 07:25 pilot3
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc 159815855 Oct 11 11:02 HITS.41481167._037151.pool.root.1
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc       531 Oct 11 11:02 boinc_task_state.xml
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc      1027 Oct 11 11:03 memory_monitor_summary.json
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc   1617228 Oct 11 11:03 agis_ddmendpoints.agis.ALL.json
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc    383411 Oct 11 11:03 log.41481167._037151.job.log.tgz.1
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc        95 Oct 11 11:04 pilot_heartbeat.json
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc      7693 Oct 11 11:04 heartbeat.json
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc      4583 Oct 11 11:05 pilotlog.txt
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc   1078098 Oct 11 11:05 log.41481167._037151.job.log.1
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc       357 Oct 11 11:05 output.list
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc       620 Oct 11 11:05 runtime_log
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc   1484800 Oct 11 11:05 result.tar.gz
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc     10999 Oct 11 11:05 runtime_log.err
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc       644 Oct 11 11:05 Ia9MDmPQ1I6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmuIzKDmCXMMlm.diag
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc      8192 Oct 11 11:24 boinc_mmap_file
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc        28 Oct 11 11:24 wrapper_checkpoint.txt
[2024-10-11 11:24:04] -rw-r--r--. 1 boinc boinc     21499 Oct 11 11:24 stderr.txt
[2024-10-11 11:24:04] HITS file was successfully produced:
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc 159815855 Oct 11 11:02 shared/HITS.pool.root.1
[2024-10-11 11:24:04]  *** Contents of shared directory: ***
[2024-10-11 11:24:04] total 459384
[2024-10-11 11:24:04] -rw-r--r--. 2 boinc boinc 308581693 Oct 11 07:22 ATLAS.root_0
[2024-10-11 11:24:04] -rw-r--r--. 2 boinc boinc     17537 Oct 11 07:22 start_atlas.sh
[2024-10-11 11:24:04] -rw-r--r--. 2 boinc boinc    498208 Oct 11 07:22 input.tar.gz
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc 159815855 Oct 11 11:02 HITS.pool.root.1
[2024-10-11 11:24:04] -rw-------. 1 boinc boinc   1484800 Oct 11 11:05 result.tar.gz
11:24:06 (6804): run_atlas exited; CPU time 45487.054928
11:24:06 (6804): called boinc_finish(0)

</stderr_txt>
]]>

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