Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
20:58:50 (3054389): wrapper (7.7.26015): starting
20:58:50 (3054389): wrapper: running run_atlas (--nthreads 2)
[2024-10-09 20:58:50] Arguments: --nthreads 2
[2024-10-09 20:58:50] Threads: 2
[2024-10-09 20:58:50] Checking for CVMFS
[2024-10-09 20:58:56] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-09 20:59:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-09 20:59:15] Running cvmfs_config stat atlas.cern.ch
[2024-10-09 20:59:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-09 20:59:15] 2.11.0.0 3054600 0 25104 138153 3 1 4560108 6144001 0 130560 0 0 0.000 1237 261 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-09 20:59:15] CVMFS is ok
[2024-10-09 20:59:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-09 20:59:15] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-09 20:59:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-09 20:59:15] Further information can be found at the LHC@home message board.
[2024-10-09 20:59:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-09 20:59:15] Checking for apptainer binary...
[2024-10-09 20:59:15] apptainer is not installed, using version from CVMFS
[2024-10-09 20:59:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-09 20:59:15] mordor
[2024-10-09 20:59:15] apptainer works
[2024-10-09 20:59:15] Set ATHENA_PROC_NUMBER=2
[2024-10-09 20:59:15] Set ATHENA_CORE_NUMBER=2
[2024-10-09 20:59:15] Starting ATLAS job with PandaID=6361455230
[2024-10-09 20:59:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-10 01:46:53]  *** The last 200 lines of the pilot log: ***
[2024-10-10 01:46:53] 2024-10-09 23:46:39,144 | INFO     | intersect: -23765044778.422203
[2024-10-10 01:46:53] 2024-10-09 23:46:39,144 | INFO     | chi2: 4.154398352214792
[2024-10-10 01:46:53] 2024-10-09 23:46:39,144 | INFO     | model: linear, x: [1728500423.0, 1728500484.0, 1728500545.0, 1728500606.0, 1728500667.0, 1728500728.0, 1728500789.0, 1728500850.0, 1728500911.0, 1728500972.0, 1728
[2024-10-10 01:46:53] 2024-10-09 23:46:39,144 | INFO     | sum of square deviations: 6590397078.389888
[2024-10-10 01:46:53] 2024-10-09 23:46:39,146 | INFO     | sum of deviations: 109045351599.01796
[2024-10-10 01:46:53] 2024-10-09 23:46:39,146 | INFO     | mean x: 1728508841.0469315
[2024-10-10 01:46:53] 2024-10-09 23:46:39,146 | INFO     | mean y: 2219639.844765343
[2024-10-10 01:46:53] 2024-10-09 23:46:39,146 | INFO     | -- intersect: -28597855905.227406
[2024-10-10 01:46:53] 2024-10-09 23:46:39,146 | INFO     | intersect: -28597855905.227406
[2024-10-10 01:46:53] 2024-10-09 23:46:39,146 | INFO     | chi2: 3.5123140692757393
[2024-10-10 01:46:53] 2024-10-09 23:46:39,146 | INFO     | current chi2=3.5123140692757393 (change=15.455529982981647 %)
[2024-10-10 01:46:53] 2024-10-09 23:46:39,146 | INFO     | right removable region: 276
[2024-10-10 01:46:53] 2024-10-09 23:46:39,147 | INFO     | model: linear, x: [1728500728.0, 1728500789.0, 1728500850.0, 1728500911.0, 1728500972.0, 1728501033.0, 1728501094.0, 1728501155.0, 1728501216.0, 1728501277.0, 1728
[2024-10-10 01:46:53] 2024-10-09 23:46:39,147 | INFO     | sum of square deviations: 6590389148.389888
[2024-10-10 01:46:53] 2024-10-09 23:46:39,148 | INFO     | sum of deviations: 31839134446.277977
[2024-10-10 01:46:53] 2024-10-09 23:46:39,148 | INFO     | mean x: 1728509146.0469315
[2024-10-10 01:46:53] 2024-10-09 23:46:39,148 | INFO     | mean y: 2240788.2093862817
[2024-10-10 01:46:53] 2024-10-09 23:46:39,148 | INFO     | -- intersect: -8348439854.989798
[2024-10-10 01:46:53] 2024-10-09 23:46:39,148 | INFO     | intersect: -8348439854.989798
[2024-10-10 01:46:53] 2024-10-09 23:46:39,149 | INFO     | chi2: 1.618227665917617
[2024-10-10 01:46:53] 2024-10-09 23:46:39,149 | INFO     | current chi2=1.618227665917617 (change=61.04784547069474 %)
[2024-10-10 01:46:53] 2024-10-09 23:46:39,149 | INFO     | model: linear, x: [1728501033.0, 1728501094.0, 1728501155.0, 1728501216.0, 1728501277.0, 1728501338.0, 1728501399.0, 1728501460.0, 1728501521.0, 1728501582.0, 1728
[2024-10-10 01:46:53] 2024-10-09 23:46:39,149 | INFO     | sum of square deviations: 6239904193.378671
[2024-10-10 01:46:53] 2024-10-09 23:46:39,150 | INFO     | sum of deviations: -2665123929.9742565
[2024-10-10 01:46:53] 2024-10-09 23:46:39,150 | INFO     | mean x: 1728509298.547794
[2024-10-10 01:46:53] 2024-10-09 23:46:39,151 | INFO     | mean y: 2255800.9595588236
[2024-10-10 01:46:53] 2024-10-09 23:46:39,151 | INFO     | -- intersect: 740518978.0818976
[2024-10-10 01:46:53] 2024-10-09 23:46:39,151 | INFO     | intersect: 740518978.0818976
[2024-10-10 01:46:53] 2024-10-09 23:46:39,151 | INFO     | chi2: 0.9519727036067509
[2024-10-10 01:46:53] 2024-10-09 23:46:39,151 | INFO     | current chi2=0.9519727036067509 (change=41.171892950740386 %)
[2024-10-10 01:46:53] 2024-10-09 23:46:39,151 | INFO     | model: linear, x: [1728501338.0, 1728501399.0, 1728501460.0, 1728501521.0, 1728501582.0, 1728501643.0, 1728501704.0, 1728501765.0, 1728501826.0, 1728501887.0, 1728
[2024-10-10 01:46:53] 2024-10-09 23:46:39,151 | INFO     | sum of square deviations: 5902070638.367078
[2024-10-10 01:46:53] 2024-10-09 23:46:39,153 | INFO     | sum of deviations: -13399950191.745317
[2024-10-10 01:46:53] 2024-10-09 23:46:39,153 | INFO     | mean x: 1728509451.0486891
[2024-10-10 01:46:53] 2024-10-09 23:46:39,153 | INFO     | mean y: 2260558.4419475654
[2024-10-10 01:46:53] 2024-10-09 23:46:39,153 | INFO     | -- intersect: 3926635912.312953
[2024-10-10 01:46:53] 2024-10-09 23:46:39,153 | INFO     | intersect: 3926635912.312953
[2024-10-10 01:46:53] 2024-10-09 23:46:39,153 | INFO     | chi2: 0.667162807389917
[2024-10-10 01:46:53] 2024-10-09 23:46:39,153 | INFO     | current chi2=0.667162807389917 (change=29.917863730522015 %)
[2024-10-10 01:46:53] 2024-10-09 23:46:39,154 | INFO     | model: linear, x: [1728501643.0, 1728501704.0, 1728501765.0, 1728501826.0, 1728501887.0, 1728501948.0, 1728502009.0, 1728502070.0, 1728502131.0, 1728502192.0, 1728
[2024-10-10 01:46:53] 2024-10-09 23:46:39,154 | INFO     | sum of square deviations: 5576655920.854947
[2024-10-10 01:46:53] 2024-10-09 23:46:39,155 | INFO     | sum of deviations: -14333130507.83206
[2024-10-10 01:46:53] 2024-10-09 23:46:39,155 | INFO     | mean x: 1728509603.5496182
[2024-10-10 01:46:53] 2024-10-09 23:46:39,155 | INFO     | mean y: 2260994.679389313
[2024-10-10 01:46:53] 2024-10-09 23:46:39,155 | INFO     | -- intersect: 4444879309.907905
[2024-10-10 01:46:53] 2024-10-09 23:46:39,155 | INFO     | intersect: 4444879309.907905
[2024-10-10 01:46:53] 2024-10-09 23:46:39,156 | INFO     | chi2: 0.6662859571071343
[2024-10-10 01:46:53] 2024-10-09 23:46:39,156 | INFO     | current chi2=0.6662859571071343 (change=0.13142973095473356 %)
[2024-10-10 01:46:53] 2024-10-09 23:46:39,156 | INFO     | left removable region: 40
[2024-10-10 01:46:53] 2024-10-09 23:46:39,156 | INFO     | model: linear, x: [1728502863.0, 1728502924.0, 1728502985.0, 1728503046.0, 1728503107.0, 1728503168.0, 1728503229.0, 1728503290.0, 1728503351.0, 1728503412.0, 1728
[2024-10-10 01:46:53] 2024-10-09 23:46:39,156 | INFO     | sum of square deviations: 4075703188.2838874
[2024-10-10 01:46:53] 2024-10-09 23:46:39,157 | INFO     | sum of deviations: -2199491393.169492
[2024-10-10 01:46:53] 2024-10-09 23:46:39,157 | INFO     | mean x: 1728510030.5550847
[2024-10-10 01:46:53] 2024-10-09 23:46:39,157 | INFO     | mean y: 2269001.474576271
[2024-10-10 01:46:53] 2024-10-09 23:46:39,157 | INFO     | -- intersect: 935075626.3882626
[2024-10-10 01:46:53] 2024-10-09 23:46:39,157 | INFO     | intersect: 935075626.3882626
[2024-10-10 01:46:53] 2024-10-09 23:46:39,158 | INFO     | chi2: 0.002703020080080242
[2024-10-10 01:46:53] 2024-10-09 23:46:39,158 | INFO     | -- intersect: 935075626.3882626
[2024-10-10 01:46:53] 2024-10-09 23:46:39,158 | INFO     | current memory leak: -0.54 B/s (using 236 data points, chi2=0.00)
[2024-10-10 01:46:53] 2024-10-09 23:46:39,158 | INFO     | ..............................
[2024-10-10 01:46:53] 2024-10-09 23:46:39,158 | INFO     | . Timing measurements:
[2024-10-10 01:46:53] 2024-10-09 23:46:39,158 | INFO     | . get job = 0 s
[2024-10-10 01:46:53] 2024-10-09 23:46:39,158 | INFO     | . initial setup = 23 s
[2024-10-10 01:46:53] 2024-10-09 23:46:39,158 | INFO     | . payload setup = 3 s
[2024-10-10 01:46:53] 2024-10-09 23:46:39,159 | INFO     | . stage-in = 0 s
[2024-10-10 01:46:53] 2024-10-09 23:46:39,159 | INFO     | . payload execution = 17152 s
[2024-10-10 01:46:53] 2024-10-09 23:46:39,159 | INFO     | . stage-out = 1 s
[2024-10-10 01:46:53] 2024-10-09 23:46:39,159 | INFO     | . log creation = 0 s
[2024-10-10 01:46:53] 2024-10-09 23:46:39,159 | INFO     | ..............................
[2024-10-10 01:46:53] 2024-10-09 23:46:39,443 | INFO     | 
[2024-10-10 01:46:53] 2024-10-09 23:46:39,443 | INFO     | job summary report
[2024-10-10 01:46:53] 2024-10-09 23:46:39,443 | INFO     | --------------------------------------------------
[2024-10-10 01:46:53] 2024-10-09 23:46:39,444 | INFO     | PanDA job id: 6361455230
[2024-10-10 01:46:53] 2024-10-09 23:46:39,444 | INFO     | task id: 41481167
[2024-10-10 01:46:53] 2024-10-09 23:46:39,444 | INFO     | errors: (none)
[2024-10-10 01:46:53] 2024-10-09 23:46:39,444 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-10 01:46:53] 2024-10-09 23:46:39,444 | INFO     | pilot state: finished 
[2024-10-10 01:46:53] 2024-10-09 23:46:39,444 | INFO     | transexitcode: 0
[2024-10-10 01:46:53] 2024-10-09 23:46:39,444 | INFO     | exeerrorcode: 0
[2024-10-10 01:46:53] 2024-10-09 23:46:39,445 | INFO     | exeerrordiag: 
[2024-10-10 01:46:53] 2024-10-09 23:46:39,445 | INFO     | exitcode: 0
[2024-10-10 01:46:53] 2024-10-09 23:46:39,445 | INFO     | exitmsg: OK
[2024-10-10 01:46:53] 2024-10-09 23:46:39,445 | INFO     | cpuconsumptiontime: 32467 s
[2024-10-10 01:46:53] 2024-10-09 23:46:39,445 | INFO     | nevents: 400
[2024-10-10 01:46:53] 2024-10-09 23:46:39,445 | INFO     | neventsw: 0
[2024-10-10 01:46:53] 2024-10-09 23:46:39,445 | INFO     | pid: 3064892
[2024-10-10 01:46:53] 2024-10-09 23:46:39,446 | INFO     | pgrp: 3064892
[2024-10-10 01:46:53] 2024-10-09 23:46:39,446 | INFO     | corecount: 2
[2024-10-10 01:46:53] 2024-10-09 23:46:39,446 | INFO     | event service: False
[2024-10-10 01:46:53] 2024-10-09 23:46:39,446 | INFO     | sizes: {0: 2436895, 1: 2437150, 3: 2437356, 12: 2437384, 17159: 2469297, 17161: 2478335, 17164: 2478519, 17184: 2478689}
[2024-10-10 01:46:53] 2024-10-09 23:46:39,446 | INFO     | --------------------------------------------------
[2024-10-10 01:46:53] 2024-10-09 23:46:39,446 | INFO     | 
[2024-10-10 01:46:53] 2024-10-09 23:46:39,446 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-10-10 01:46:53] 2024-10-09 23:46:39,465 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,465 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,467 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-10 01:46:53] 2024-10-09 23:46:39,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,467 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-10 01:46:53] 2024-10-09 23:46:39,467 | INFO     | job 6361455230 has completed (purged errors)
[2024-10-10 01:46:53] 2024-10-09 23:46:39,468 | INFO     | overall cleanup function is called
[2024-10-10 01:46:53] 2024-10-09 23:46:40,473 | INFO     | --- collectZombieJob: --- 10, [3064892]
[2024-10-10 01:46:53] 2024-10-09 23:46:40,474 | INFO     | zombie collector waiting for pid 3064892
[2024-10-10 01:46:53] 2024-10-09 23:46:40,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-10 01:46:53] 2024-10-09 23:46:40,474 | INFO     | collected zombie processes
[2024-10-10 01:46:53] 2024-10-09 23:46:40,474 | INFO     | will  attempt to kill all subprocesses of pid=3064892
[2024-10-10 01:46:53] 2024-10-09 23:46:40,506 | INFO     | process IDs to be killed: [3064892] (in reverse order)
[2024-10-10 01:46:53] 2024-10-09 23:46:40,534 | WARNING  | found no corresponding commands to process id(s)
[2024-10-10 01:46:53] 2024-10-09 23:46:40,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-10 01:46:53] 2024-10-09 23:46:40,536 | INFO     | did not find any defunct processes belonging to 3064892
[2024-10-10 01:46:53] 2024-10-09 23:46:40,537 | INFO     | did not find any defunct processes belonging to 3064892
[2024-10-10 01:46:53] 2024-10-09 23:46:40,537 | INFO     | ready for new job
[2024-10-10 01:46:53] 2024-10-09 23:46:40,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-10 01:46:53] 2024-10-09 23:46:40,539 | INFO     | *************************************
[2024-10-10 01:46:53] 2024-10-09 23:46:40,539 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-10 01:46:53] 2024-10-09 23:46:40,539 | INFO     | *************************************
[2024-10-10 01:46:53] 2024-10-09 23:46:40,539 | INFO     | 
[2024-10-10 01:46:53] 2024-10-09 23:46:40,557 | INFO     | architecture information:
[2024-10-10 01:46:53] 2024-10-09 23:46:40,558 | INFO     | executing command: cat /etc/os-release
[2024-10-10 01:46:53] 2024-10-09 23:46:40,571 | INFO     | cat /etc/os-release:
[2024-10-10 01:46:53] NAME="CentOS Linux"
[2024-10-10 01:46:53] VERSION="7 (Core)"
[2024-10-10 01:46:53] ID="centos"
[2024-10-10 01:46:53] ID_LIKE="rhel fedora"
[2024-10-10 01:46:53] VERSION_ID="7"
[2024-10-10 01:46:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-10 01:46:53] ANSI_COLOR="0;31"
[2024-10-10 01:46:53] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-10 01:46:53] HOME_URL="https://www.centos.org/"
[2024-10-10 01:46:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-10 01:46:53] 
[2024-10-10 01:46:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-10 01:46:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-10 01:46:53] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-10 01:46:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-10 01:46:53] 
[2024-10-10 01:46:53] 2024-10-09 23:46:40,571 | INFO     | *************************************
[2024-10-10 01:46:53] 2024-10-09 23:46:41,073 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-10-10 01:46:53] 2024-10-09 23:46:41,088 | INFO     | sufficient remaining disk space (422078054400 B)
[2024-10-10 01:46:53] 2024-10-09 23:46:41,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-10 01:46:53] 2024-10-09 23:46:41,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-10 01:46:53] 2024-10-09 23:46:41,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-10 01:46:53] 2024-10-09 23:46:41,089 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-10 01:46:53] 2024-10-09 23:46:41,089 | INFO     | found 0 job(s) in 20 queues
[2024-10-10 01:46:53] 2024-10-09 23:46:41,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-10 01:46:53] 2024-10-09 23:46:41,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-10 01:46:53] 2024-10-09 23:46:41,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-10 01:46:53] 2024-10-09 23:46:41,491 | INFO     | aborting loop
[2024-10-10 01:46:53] 2024-10-09 23:46:42,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-10 01:46:53] 2024-10-09 23:46:42,093 | INFO     | [job] retrieve thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:42,094 | INFO     | [job] queue monitor thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:42,113 | INFO     | all payload control threads have been joined
[2024-10-10 01:46:53] 2024-10-09 23:46:42,121 | INFO     | all data control threads have been joined
[2024-10-10 01:46:53] 2024-10-09 23:46:42,132 | INFO     | all job control threads have been joined
[2024-10-10 01:46:53] 2024-10-09 23:46:42,493 | INFO     | [job] job monitor thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:42,613 | INFO     | [job] create_data_payload thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:42,800 | INFO     | [payload] execute_payloads thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:42,873 | INFO     | [payload] validate_pre thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:43,048 | INFO     | [job] validate thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:43,077 | INFO     | [payload] validate_post thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:43,119 | INFO     | [payload] control thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:43,125 | INFO     | [data] control thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:43,137 | INFO     | [job] control thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:43,249 | INFO     | [payload] failed_post thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:43,326 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:43,520 | INFO     | [data] copytool_in thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:43,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-10 01:46:53] 2024-10-09 23:46:44,089 | INFO     | [data] copytool_out thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:47,637 | INFO     | [data] queue_monitor thread has finished
[2024-10-10 01:46:53] 2024-10-09 23:46:48,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978263234368)>', '<ExcThread(monitor, started 139977614685952)>']
[2024-10-10 01:46:53] 2024-10-09 23:46:49,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-10 01:46:53] 2024-10-09 23:46:49,125 | INFO     | [monitor] control thread has ended
[2024-10-10 01:46:53] 2024-10-09 23:46:53,771 | INFO     | all workflow threads have been joined
[2024-10-10 01:46:53] 2024-10-09 23:46:53,772 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-10 01:46:53] 2024-10-09 23:46:53,772 | INFO     | traces error code: 0
[2024-10-10 01:46:53] 2024-10-09 23:46:53,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-10 01:46:53] 2024-10-09 23:46:53,858 [wrapper] ==== pilot stdout END ====
[2024-10-10 01:46:53] 2024-10-09 23:46:53,859 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-10 01:46:53] 2024-10-09 23:46:53,861 [wrapper] pilotpid: 3058552
[2024-10-10 01:46:53] 2024-10-09 23:46:53,862 [wrapper] Pilot exit status: 0
[2024-10-10 01:46:53] 2024-10-09 23:46:53,868 [wrapper] pandaids: 6361455230
[2024-10-10 01:46:53] 2024-10-09 23:46:53,881 [wrapper] cleanup supervisor_pilot 3095881 3058553
[2024-10-10 01:46:53] 2024-10-09 23:46:53,882 [wrapper] Test setup, not cleaning
[2024-10-10 01:46:53] 2024-10-09 23:46:53,884 [wrapper] ==== wrapper stdout END ====
[2024-10-10 01:46:53] 2024-10-09 23:46:53,887 [wrapper] ==== wrapper stderr END ====
[2024-10-10 01:46:53] 2024-10-09 23:46:53,890 [wrapper] apfmon messages muted
[2024-10-10 01:46:53]  *** Error codes and diagnostics ***
[2024-10-10 01:46:53]     "exeErrorCode": 0,
[2024-10-10 01:46:53]     "exeErrorDiag": "",
[2024-10-10 01:46:53]     "pilotErrorCode": 0,
[2024-10-10 01:46:53]     "pilotErrorDiag": "",
[2024-10-10 01:46:53]  *** Listing of results directory ***
[2024-10-10 01:46:53] total 472320
[2024-10-10 01:46:53] -rw-r--r-- 1 root root    484599 Oct  9 18:14 pilot3.tar.gz
[2024-10-10 01:46:53] -rw-r--r-- 1 root root      5653 Oct  9 18:23 queuedata.json
[2024-10-10 01:46:53] -rwx------ 1 4871 1028     33942 Oct  9 18:25 runpilot2-wrapper.sh
[2024-10-10 01:46:53] -rw-r--r-- 1 root root       100 Oct  9 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-10 01:46:53] -rwxr-xr-x 1 root root      7986 Oct  9 20:58 run_atlas
[2024-10-10 01:46:53] -rw-r--r-- 1 root root       105 Oct  9 20:58 job.xml
[2024-10-10 01:46:53] -rw-r--r-- 2 root root     17537 Oct  9 20:58 start_atlas.sh
[2024-10-10 01:46:53] drwxrwx--x 2 root root      4096 Oct  9 20:58 shared
[2024-10-10 01:46:53] -rw-r--r-- 2 root root    498200 Oct  9 20:58 input.tar.gz
[2024-10-10 01:46:53] -rw-r--r-- 1 root root      6134 Oct  9 20:58 init_data.xml
[2024-10-10 01:46:53] -rw-r--r-- 2 root root 310957549 Oct  9 20:58 EVNT.41239421._000548.pool.root.1
[2024-10-10 01:46:53] -rw-r--r-- 1 root root         0 Oct  9 20:58 boinc_lockfile
[2024-10-10 01:46:53] -rw-r--r-- 1 root root      2455 Oct  9 20:59 pandaJob.out
[2024-10-10 01:46:53] -rw------- 1 root root       424 Oct  9 20:59 setup.sh.local
[2024-10-10 01:46:53] -rw------- 1 root root   1024649 Oct  9 20:59 agis_schedconf.cvmfs.json
[2024-10-10 01:46:53] drwxr-xr-x 4  320  320      4096 Oct  9 21:00 pilot3
[2024-10-10 01:46:53] -rw------- 1 root root 164646443 Oct 10 01:45 HITS.41481167._025803.pool.root.1
[2024-10-10 01:46:53] -rw------- 1 root root        95 Oct 10 01:45 pilot_heartbeat.json
[2024-10-10 01:46:53] -rw-r--r-- 1 root root       530 Oct 10 01:46 boinc_task_state.xml
[2024-10-10 01:46:53] -rw------- 1 root root      1030 Oct 10 01:46 memory_monitor_summary.json
[2024-10-10 01:46:53] -rw------- 1 root root   1617228 Oct 10 01:46 agis_ddmendpoints.agis.ALL.json
[2024-10-10 01:46:53] -rw------- 1 root root    324753 Oct 10 01:46 log.41481167._025803.job.log.tgz.1
[2024-10-10 01:46:53] -rw-r--r-- 1 root root      8192 Oct 10 01:46 boinc_mmap_file
[2024-10-10 01:46:53] -rw-r--r-- 1 root root        28 Oct 10 01:46 wrapper_checkpoint.txt
[2024-10-10 01:46:53] -rw------- 1 root root      7686 Oct 10 01:46 heartbeat.json
[2024-10-10 01:46:53] -rw------- 1 root root      4342 Oct 10 01:46 pilotlog.txt
[2024-10-10 01:46:53] -rw------- 1 root root   1769293 Oct 10 01:46 log.41481167._025803.job.log.1
[2024-10-10 01:46:53] -rw------- 1 root root       357 Oct 10 01:46 output.list
[2024-10-10 01:46:53] -rw-r--r-- 1 root root       620 Oct 10 01:46 runtime_log
[2024-10-10 01:46:53] -rw------- 1 root root   2109440 Oct 10 01:46 result.tar.gz
[2024-10-10 01:46:53] -rw-r--r-- 1 root root     11091 Oct 10 01:46 runtime_log.err
[2024-10-10 01:46:53] -rw------- 1 root root       643 Oct 10 01:46 inWLDmegoI6n9Rq4apOajLDm4fhM0noT9bVorHsSDmaQhKDmLFlRJo.diag
[2024-10-10 01:46:53] -rw-r--r-- 1 root root     21711 Oct 10 01:46 stderr.txt
[2024-10-10 01:46:53] HITS file was successfully produced:
[2024-10-10 01:46:53] -rw------- 1 root root 164646443 Oct 10 01:45 shared/HITS.pool.root.1
[2024-10-10 01:46:53]  *** Contents of shared directory: ***
[2024-10-10 01:46:53] total 467036
[2024-10-10 01:46:53] -rw-r--r-- 2 root root     17537 Oct  9 20:58 start_atlas.sh
[2024-10-10 01:46:53] -rw-r--r-- 2 root root    498200 Oct  9 20:58 input.tar.gz
[2024-10-10 01:46:53] -rw-r--r-- 2 root root 310957549 Oct  9 20:58 ATLAS.root_0
[2024-10-10 01:46:53] -rw------- 1 root root 164646443 Oct 10 01:45 HITS.pool.root.1
[2024-10-10 01:46:53] -rw------- 1 root root   2109440 Oct 10 01:46 result.tar.gz
01:46:55 (3054389): run_atlas exited; CPU time 32451.981634
01:46:55 (3054389): called boinc_finish(0)

</stderr_txt>
]]>

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