Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:50:38 (5453): wrapper (7.7.26015): starting
21:50:38 (5453): wrapper: running run_atlas (--nthreads 8)
[2024-10-09 21:50:38] Arguments: --nthreads 8
[2024-10-09 21:50:38] Threads: 8
[2024-10-09 21:50:38] Checking for CVMFS
[2024-10-09 21:50:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-09 21:50:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-09 21:50:39] Running cvmfs_config stat atlas.cern.ch
[2024-10-09 21:50:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-09 21:50:40] 2.11.2.0 19225 63363 71712 138154 3 59 18657414 25165825 4649 130560 0 45183308 99.944 23963711 8973 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-09 21:50:40] CVMFS is ok
[2024-10-09 21:50:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-09 21:50:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-09 21:50:40] Further information can be found at the LHC@home message board.
[2024-10-09 21:50:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-09 21:50:40] Checking for apptainer binary...
[2024-10-09 21:50:40] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-09 21:50:40] Running /usr/bin/apptainer --version
[2024-10-09 21:50:40] apptainer version 1.3.2-1.el7
[2024-10-09 21:50:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-09 21:50:47] cg-vwn484.simple-grid.lan
[2024-10-09 21:50:47] apptainer works
[2024-10-09 21:50:47] Set ATHENA_PROC_NUMBER=8
[2024-10-09 21:50:47] Set ATHENA_CORE_NUMBER=8
[2024-10-09 21:50:47] Starting ATLAS job with PandaID=6360844781
[2024-10-09 21:50:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-10 01:21:46]  *** The last 200 lines of the pilot log: ***
[2024-10-10 01:21:46] 2024-10-09 22:56:46,116 | INFO     | sum of square deviations: 1418361477.5
[2024-10-10 01:21:46] 2024-10-09 22:56:46,117 | INFO     | sum of deviations: 115767797109.49998
[2024-10-10 01:21:46] 2024-10-09 22:56:46,118 | INFO     | mean x: 1728509121.5
[2024-10-10 01:21:46] 2024-10-09 22:56:46,118 | INFO     | mean y: 2346490.9698795183
[2024-10-10 01:21:46] 2024-10-09 22:56:46,118 | INFO     | -- intersect: -141079949139.64594
[2024-10-10 01:21:46] 2024-10-09 22:56:46,118 | INFO     | intersect: -141079949139.64594
[2024-10-10 01:21:46] 2024-10-09 22:56:46,118 | INFO     | chi2: 7.393492978553194
[2024-10-10 01:21:46] 2024-10-09 22:56:46,118 | INFO     | current chi2=7.393492978553194 (change=9.979496824689118 %)
[2024-10-10 01:21:46] 2024-10-09 22:56:46,118 | INFO     | right removable region: 165
[2024-10-10 01:21:46] 2024-10-09 22:56:46,118 | INFO     | model: linear, x: [1728504394.0, 1728504455.0, 1728504516.0, 1728504577.0, 1728504638.0, 1728504699.0, 1728504760.0, 1728504821.0, 1728504882.0, 1728504943.0, 1728
[2024-10-10 01:21:46] 2024-10-09 22:56:46,119 | INFO     | sum of square deviations: 1418361477.5
[2024-10-10 01:21:46] 2024-10-09 22:56:46,120 | INFO     | sum of deviations: 55311454638.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,120 | INFO     | mean x: 1728509426.5
[2024-10-10 01:21:46] 2024-10-09 22:56:46,120 | INFO     | mean y: 2397394.7831325303
[2024-10-10 01:21:46] 2024-10-09 22:56:46,120 | INFO     | -- intersect: -67403811989.672
[2024-10-10 01:21:46] 2024-10-09 22:56:46,120 | INFO     | intersect: -67403811989.672
[2024-10-10 01:21:46] 2024-10-09 22:56:46,120 | INFO     | chi2: 4.041949851017356
[2024-10-10 01:21:46] 2024-10-09 22:56:46,120 | INFO     | current chi2=4.041949851017356 (change=50.78667681792302 %)
[2024-10-10 01:21:46] 2024-10-09 22:56:46,121 | INFO     | model: linear, x: [1728504699.0, 1728504760.0, 1728504821.0, 1728504882.0, 1728504943.0, 1728505004.0, 1728505065.0, 1728505126.0, 1728505187.0, 1728505248.0, 1728
[2024-10-10 01:21:46] 2024-10-09 22:56:46,121 | INFO     | sum of square deviations: 1294014960.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,122 | INFO     | sum of deviations: 22638668614.999985
[2024-10-10 01:21:46] 2024-10-09 22:56:46,122 | INFO     | mean x: 1728509579.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,122 | INFO     | mean y: 2437414.0683229812
[2024-10-10 01:21:46] 2024-10-09 22:56:46,122 | INFO     | -- intersect: -30237673223.31885
[2024-10-10 01:21:46] 2024-10-09 22:56:46,122 | INFO     | intersect: -30237673223.31885
[2024-10-10 01:21:46] 2024-10-09 22:56:46,122 | INFO     | chi2: 2.529839179161172
[2024-10-10 01:21:46] 2024-10-09 22:56:46,122 | INFO     | current chi2=2.529839179161172 (change=37.41042634350317 %)
[2024-10-10 01:21:46] 2024-10-09 22:56:46,123 | INFO     | model: linear, x: [1728505004.0, 1728505065.0, 1728505126.0, 1728505187.0, 1728505248.0, 1728505309.0, 1728505370.0, 1728505431.0, 1728505492.0, 1728505553.0, 1728
[2024-10-10 01:21:46] 2024-10-09 22:56:46,123 | INFO     | sum of square deviations: 1177156955.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,124 | INFO     | sum of deviations: -8752153577.500002
[2024-10-10 01:21:46] 2024-10-09 22:56:46,124 | INFO     | mean x: 1728509731.5
[2024-10-10 01:21:46] 2024-10-09 22:56:46,124 | INFO     | mean y: 2478455.185897436
[2024-10-10 01:21:46] 2024-10-09 22:56:46,124 | INFO     | -- intersect: 12853935999.59746
[2024-10-10 01:21:46] 2024-10-09 22:56:46,124 | INFO     | intersect: 12853935999.59746
[2024-10-10 01:21:46] 2024-10-09 22:56:46,124 | INFO     | chi2: 1.0854654889363176
[2024-10-10 01:21:46] 2024-10-09 22:56:46,124 | INFO     | current chi2=1.0854654889363176 (change=57.09349835841229 %)
[2024-10-10 01:21:46] 2024-10-09 22:56:46,125 | INFO     | model: linear, x: [1728505309.0, 1728505370.0, 1728505431.0, 1728505492.0, 1728505553.0, 1728505614.0, 1728505675.0, 1728505736.0, 1728505797.0, 1728505858.0, 1728
[2024-10-10 01:21:46] 2024-10-09 22:56:46,125 | INFO     | sum of square deviations: 1067554900.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,126 | INFO     | sum of deviations: -18111239770.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,126 | INFO     | mean x: 1728509884.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,126 | INFO     | mean y: 2491328.761589404
[2024-10-10 01:21:46] 2024-10-09 22:56:46,126 | INFO     | -- intersect: 29326938206.330967
[2024-10-10 01:21:46] 2024-10-09 22:56:46,126 | INFO     | intersect: 29326938206.330967
[2024-10-10 01:21:46] 2024-10-09 22:56:46,126 | INFO     | chi2: 0.8893159127433145
[2024-10-10 01:21:46] 2024-10-09 22:56:46,126 | INFO     | current chi2=0.8893159127433145 (change=18.07054928897061 %)
[2024-10-10 01:21:46] 2024-10-09 22:56:46,126 | INFO     | left removable region: 40
[2024-10-10 01:21:46] 2024-10-09 22:56:46,126 | INFO     | model: linear, x: [1728506529.0, 1728506590.0, 1728506651.0, 1728506712.0, 1728506773.0, 1728506834.0, 1728506895.0, 1728506956.0, 1728507017.0, 1728507078.0, 1728
[2024-10-10 01:21:46] 2024-10-09 22:56:46,127 | INFO     | sum of square deviations: 605592750.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,127 | INFO     | sum of deviations: -5279009601.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,127 | INFO     | mean x: 1728510311.0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,127 | INFO     | mean y: 2503633.304
[2024-10-10 01:21:46] 2024-10-09 22:56:46,128 | INFO     | -- intersect: 15070092416.68441
[2024-10-10 01:21:46] 2024-10-09 22:56:46,128 | INFO     | intersect: 15070092416.68441
[2024-10-10 01:21:46] 2024-10-09 22:56:46,128 | INFO     | chi2: 0.010540296764633698
[2024-10-10 01:21:46] 2024-10-09 22:56:46,128 | INFO     | -- intersect: 15070092416.68441
[2024-10-10 01:21:46] 2024-10-09 22:56:46,128 | INFO     | current memory leak: -8.72 B/s (using 125 data points, chi2=0.01)
[2024-10-10 01:21:46] 2024-10-09 22:56:46,129 | INFO     | ..............................
[2024-10-10 01:21:46] 2024-10-09 22:56:46,129 | INFO     | . Timing measurements:
[2024-10-10 01:21:46] 2024-10-09 22:56:46,129 | INFO     | . get job = 0 s
[2024-10-10 01:21:46] 2024-10-09 22:56:46,129 | INFO     | . initial setup = 3 s
[2024-10-10 01:21:46] 2024-10-09 22:56:46,129 | INFO     | . payload setup = 123 s
[2024-10-10 01:21:46] 2024-10-09 22:56:46,129 | INFO     | . stage-in = 0 s
[2024-10-10 01:21:46] 2024-10-09 22:56:46,130 | INFO     | . payload execution = 10570 s
[2024-10-10 01:21:46] 2024-10-09 22:56:46,130 | INFO     | . stage-out = 4 s
[2024-10-10 01:21:46] 2024-10-09 22:56:46,130 | INFO     | . log creation = 1 s
[2024-10-10 01:21:46] 2024-10-09 22:56:46,130 | INFO     | ..............................
[2024-10-10 01:21:46] 2024-10-09 22:56:46,246 | INFO     | 
[2024-10-10 01:21:46] 2024-10-09 22:56:46,246 | INFO     | job summary report
[2024-10-10 01:21:46] 2024-10-09 22:56:46,246 | INFO     | --------------------------------------------------
[2024-10-10 01:21:46] 2024-10-09 22:56:46,246 | INFO     | PanDA job id: 6360844781
[2024-10-10 01:21:46] 2024-10-09 22:56:46,246 | INFO     | task id: 41481167
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | errors: (none)
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | pilot state: finished 
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | transexitcode: 0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | exeerrorcode: 0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | exeerrordiag: 
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | exitcode: 0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | exitmsg: OK
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | cpuconsumptiontime: 36274 s
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | nevents: 400
[2024-10-10 01:21:46] 2024-10-09 22:56:46,247 | INFO     | neventsw: 0
[2024-10-10 01:21:46] 2024-10-09 22:56:46,248 | INFO     | pid: 16838
[2024-10-10 01:21:46] 2024-10-09 22:56:46,248 | INFO     | pgrp: 16838
[2024-10-10 01:21:46] 2024-10-09 22:56:46,248 | INFO     | corecount: 8
[2024-10-10 01:21:46] 2024-10-09 22:56:46,248 | INFO     | event service: False
[2024-10-10 01:21:46] 2024-10-09 22:56:46,248 | INFO     | sizes: {0: 2436944, 1: 2437143, 12: 2437143, 23: 2437171, 33: 2437199, 44: 2437227, 55: 2437383, 66: 2437411, 76: 2437439, 87: 2437495, 96: 2437729, 98: 2438037, 1
[2024-10-10 01:21:46] 2024-10-09 22:56:46,248 | INFO     | --------------------------------------------------
[2024-10-10 01:21:46] 2024-10-09 22:56:46,248 | INFO     | 
[2024-10-10 01:21:46] 2024-10-09 22:56:46,248 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-10-10 01:21:46] 2024-10-09 22:56:46,596 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,596 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,596 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,598 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-10 01:21:46] 2024-10-09 22:56:46,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,598 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-10 01:21:46] 2024-10-09 22:56:46,598 | INFO     | job 6360844781 has completed (purged errors)
[2024-10-10 01:21:46] 2024-10-09 22:56:46,598 | INFO     | overall cleanup function is called
[2024-10-10 01:21:46] 2024-10-09 22:56:47,607 | INFO     | --- collectZombieJob: --- 10, [16838]
[2024-10-10 01:21:46] 2024-10-09 22:56:47,608 | INFO     | zombie collector waiting for pid 16838
[2024-10-10 01:21:46] 2024-10-09 22:56:47,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-10 01:21:46] 2024-10-09 22:56:47,608 | INFO     | collected zombie processes
[2024-10-10 01:21:46] 2024-10-09 22:56:47,608 | INFO     | will  attempt to kill all subprocesses of pid=16838
[2024-10-10 01:21:46] 2024-10-09 22:56:48,393 | INFO     | process IDs to be killed: [16838] (in reverse order)
[2024-10-10 01:21:46] 2024-10-09 22:56:49,165 | WARNING  | found no corresponding commands to process id(s)
[2024-10-10 01:21:46] 2024-10-09 22:56:49,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-10 01:21:46] 2024-10-09 22:56:49,169 | INFO     | did not find any defunct processes belonging to 16838
[2024-10-10 01:21:46] 2024-10-09 22:56:49,172 | INFO     | did not find any defunct processes belonging to 16838
[2024-10-10 01:21:46] 2024-10-09 22:56:49,172 | INFO     | ready for new job
[2024-10-10 01:21:46] 2024-10-09 22:56:49,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-10 01:21:46] 2024-10-09 22:56:49,178 | INFO     | *************************************
[2024-10-10 01:21:46] 2024-10-09 22:56:49,178 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-10 01:21:46] 2024-10-09 22:56:49,179 | INFO     | *************************************
[2024-10-10 01:21:46] 2024-10-09 22:56:49,179 | INFO     | 
[2024-10-10 01:21:46] 2024-10-09 22:56:49,179 | INFO     | pilot is running in a VM
[2024-10-10 01:21:46] 2024-10-09 22:56:49,179 | INFO     | architecture information:
[2024-10-10 01:21:46] 2024-10-09 22:56:49,189 | INFO     | executing command: cat /etc/os-release
[2024-10-10 01:21:46] 2024-10-09 22:56:49,360 | INFO     | cat /etc/os-release:
[2024-10-10 01:21:46] NAME="CentOS Linux"
[2024-10-10 01:21:46] VERSION="7 (Core)"
[2024-10-10 01:21:46] ID="centos"
[2024-10-10 01:21:46] ID_LIKE="rhel fedora"
[2024-10-10 01:21:46] VERSION_ID="7"
[2024-10-10 01:21:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-10 01:21:46] ANSI_COLOR="0;31"
[2024-10-10 01:21:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-10 01:21:46] HOME_URL="https://www.centos.org/"
[2024-10-10 01:21:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-10 01:21:46] 
[2024-10-10 01:21:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-10 01:21:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-10 01:21:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-10 01:21:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-10 01:21:46] 
[2024-10-10 01:21:46] 2024-10-09 22:56:49,360 | INFO     | *************************************
[2024-10-10 01:21:46] 2024-10-09 22:56:49,863 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-10-10 01:21:46] 2024-10-09 22:56:50,097 | INFO     | sufficient remaining disk space (485443502080 B)
[2024-10-10 01:21:46] 2024-10-09 22:56:50,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-10 01:21:46] 2024-10-09 22:56:50,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-10 01:21:46] 2024-10-09 22:56:50,098 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-10 01:21:46] 2024-10-09 22:56:50,099 | INFO     | found 0 job(s) in 20 queues
[2024-10-10 01:21:46] 2024-10-09 22:56:50,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-10 01:21:46] 2024-10-09 22:56:50,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-10 01:21:46] 2024-10-09 22:56:50,133 | INFO     | all data control threads have been joined
[2024-10-10 01:21:46] 2024-10-09 22:56:50,291 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-10 01:21:46] 2024-10-09 22:56:50,292 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-10 01:21:46] 2024-10-09 22:56:50,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-10 01:21:46] 2024-10-09 22:56:50,292 | INFO     | will abort loop
[2024-10-10 01:21:46] 2024-10-09 22:56:50,598 | INFO     | all payload control threads have been joined
[2024-10-10 01:21:46] 2024-10-09 22:56:50,624 | INFO     | all job control threads have been joined
[2024-10-10 01:21:46] 2024-10-09 22:56:51,103 | INFO     | [job] retrieve thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,139 | INFO     | [data] control thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,195 | INFO     | [payload] execute_payloads thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-10 01:21:46] 2024-10-09 22:56:51,297 | INFO     | [job] job monitor thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-10 01:21:46] 2024-10-09 22:56:51,546 | INFO     | [job] validate thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,605 | INFO     | [payload] control thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,630 | INFO     | [job] control thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,632 | INFO     | [payload] failed_post thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,759 | INFO     | [payload] validate_post thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,899 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:51,976 | INFO     | [job] create_data_payload thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:52,028 | INFO     | [data] copytool_in thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:52,086 | INFO     | [payload] validate_pre thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:52,270 | INFO     | [job] queue monitor thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:52,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-10 01:21:46] 2024-10-09 22:56:53,372 | INFO     | [data] copytool_out thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:56,416 | INFO     | [data] queue_monitor thread has finished
[2024-10-10 01:21:46] 2024-10-09 22:56:57,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871290189632)>', '<ExcThread(monitor, started 139870626371328)>']
[2024-10-10 01:21:46] 2024-10-09 22:56:58,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-10 01:21:46] 2024-10-09 22:56:58,147 | INFO     | [monitor] control thread has ended
[2024-10-10 01:21:46] 2024-10-09 22:57:02,329 | INFO     | all workflow threads have been joined
[2024-10-10 01:21:46] 2024-10-09 22:57:02,330 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-10 01:21:46] 2024-10-09 22:57:02,330 | INFO     | traces error code: 0
[2024-10-10 01:21:46] 2024-10-09 22:57:02,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-10 01:21:46] 2024-10-09 22:57:02,602 [wrapper] ==== pilot stdout END ====
[2024-10-10 01:21:46] 2024-10-09 22:57:02,616 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-10 01:21:46] 2024-10-09 22:57:02,627 [wrapper] pilotpid: 9564
[2024-10-10 01:21:46] 2024-10-09 22:57:02,639 [wrapper] Pilot exit status: 0
[2024-10-10 01:21:46] 2024-10-09 22:57:02,997 [wrapper] pandaids: 6360844781
[2024-10-10 01:21:46] 2024-10-09 22:57:03,602 [wrapper] cleanup supervisor_pilot 25584 9565
[2024-10-10 01:21:46] 2024-10-09 22:57:03,669 [wrapper] Test setup, not cleaning
[2024-10-10 01:21:46] 2024-10-09 22:57:03,736 [wrapper] ==== wrapper stdout END ====
[2024-10-10 01:21:46] 2024-10-09 22:57:03,782 [wrapper] ==== wrapper stderr END ====
[2024-10-10 01:21:46] 2024-10-09 22:57:03,947 [wrapper] apfmon messages muted
[2024-10-10 01:21:46]  *** Error codes and diagnostics ***
[2024-10-10 01:21:46]     "exeErrorCode": 0,
[2024-10-10 01:21:46]     "exeErrorDiag": "",
[2024-10-10 01:21:46]     "pilotErrorCode": 0,
[2024-10-10 01:21:46]     "pilotErrorDiag": "",
[2024-10-10 01:21:46]  *** Listing of results directory ***
[2024-10-10 01:21:46] total 460468
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc    484599 Oct  8 20:08 pilot3.tar.gz
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc      5653 Oct  8 20:10 queuedata.json
[2024-10-10 01:21:46] -rwx------. 1 boinc boinc     33942 Oct  8 20:11 runpilot2-wrapper.sh
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc       100 Oct  9 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-10 01:21:46] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 21:50 run_atlas
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc       105 Oct  9 21:50 job.xml
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc      6347 Oct  9 21:50 init_data.xml
[2024-10-10 01:21:46] -rw-r--r--. 2 boinc boinc 311055319 Oct  9 21:50 EVNT.41239421._000215.pool.root.1
[2024-10-10 01:21:46] -rw-r--r--. 2 boinc boinc     17537 Oct  9 21:50 start_atlas.sh
[2024-10-10 01:21:46] drwxrwx--x. 2 boinc boinc        68 Oct  9 21:50 shared
[2024-10-10 01:21:46] -rw-r--r--. 2 boinc boinc    498192 Oct  9 21:50 input.tar.gz
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc         0 Oct  9 21:50 boinc_lockfile
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc      2456 Oct  9 21:50 pandaJob.out
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc       424 Oct  9 21:50 setup.sh.local
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc   1024651 Oct  9 21:53 agis_schedconf.cvmfs.json
[2024-10-10 01:21:46] drwx------. 4 boinc boinc      4096 Oct  9 21:53 pilot3
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc 154106948 Oct 10 00:54 HITS.41481167._004381.pool.root.1
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc       530 Oct 10 00:54 boinc_task_state.xml
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc      1016 Oct 10 00:55 memory_monitor_summary.json
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc   1617228 Oct 10 00:55 agis_ddmendpoints.agis.ALL.json
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc    356723 Oct 10 00:55 log.41481167._004381.job.log.tgz.1
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc        95 Oct 10 00:55 pilot_heartbeat.json
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc      7697 Oct 10 00:56 heartbeat.json
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc      4583 Oct 10 00:57 pilotlog.txt
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc    893116 Oct 10 00:57 log.41481167._004381.job.log.1
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc       357 Oct 10 00:57 output.list
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc       620 Oct 10 00:57 runtime_log
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc   1269760 Oct 10 00:57 result.tar.gz
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc     10999 Oct 10 00:57 runtime_log.err
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc       644 Oct 10 00:57 BPdLDmPrTI6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmLKuKDmNHzqym.diag
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc      8192 Oct 10 01:21 boinc_mmap_file
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc        27 Oct 10 01:21 wrapper_checkpoint.txt
[2024-10-10 01:21:46] -rw-r--r--. 1 boinc boinc     21472 Oct 10 01:21 stderr.txt
[2024-10-10 01:21:46] HITS file was successfully produced:
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc 154106948 Oct 10 00:54 shared/HITS.pool.root.1
[2024-10-10 01:21:46]  *** Contents of shared directory: ***
[2024-10-10 01:21:46] total 456012
[2024-10-10 01:21:46] -rw-r--r--. 2 boinc boinc 311055319 Oct  9 21:50 ATLAS.root_0
[2024-10-10 01:21:46] -rw-r--r--. 2 boinc boinc     17537 Oct  9 21:50 start_atlas.sh
[2024-10-10 01:21:46] -rw-r--r--. 2 boinc boinc    498192 Oct  9 21:50 input.tar.gz
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc 154106948 Oct 10 00:54 HITS.pool.root.1
[2024-10-10 01:21:46] -rw-------. 1 boinc boinc   1269760 Oct 10 00:57 result.tar.gz
01:21:48 (5453): run_atlas exited; CPU time 36242.390113
01:21:48 (5453): called boinc_finish(0)

</stderr_txt>
]]>

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