Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:25:15 (2888374): wrapper (7.7.26015): starting
22:25:15 (2888374): wrapper: running run_atlas (--nthreads 2)
[2024-10-08 22:25:15] Arguments: --nthreads 2
[2024-10-08 22:25:15] Threads: 2
[2024-10-08 22:25:15] Checking for CVMFS
[2024-10-08 22:25:27] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-08 22:25:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-08 22:25:47] Running cvmfs_config stat atlas.cern.ch
[2024-10-08 22:25:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-08 22:25:47] 2.11.0.0 2888585 0 25640 138118 3 1 3740110 6144001 0 130560 0 0 0.000 1237 107 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-08 22:25:47] CVMFS is ok
[2024-10-08 22:25:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-08 22:25:47] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-08 22:25:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-08 22:25:47] Further information can be found at the LHC@home message board.
[2024-10-08 22:25:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-08 22:25:47] Checking for apptainer binary...
[2024-10-08 22:25:47] apptainer is not installed, using version from CVMFS
[2024-10-08 22:25:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-08 22:25:48] mordor
[2024-10-08 22:25:48] apptainer works
[2024-10-08 22:25:48] Set ATHENA_PROC_NUMBER=2
[2024-10-08 22:25:48] Set ATHENA_CORE_NUMBER=2
[2024-10-08 22:25:48] Starting ATLAS job with PandaID=6360829886
[2024-10-08 22:25:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-09 02:25:40]  *** The last 200 lines of the pilot log: ***
[2024-10-09 02:25:40] 2024-10-09 00:25:20,873 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-09 02:25:40] 2024-10-09 00:25:20,876 | INFO     | fitting pss+swap vs Time
[2024-10-09 02:25:40] 2024-10-09 00:25:20,877 | INFO     | model: linear, x: [1728419278.0, 1728419339.0, 1728419400.0, 1728419461.0, 1728419522.0, 1728419583.0, 1728419644.0, 1728419705.0, 1728419766.0, 1728419827.0, 1728
[2024-10-09 02:25:40] 2024-10-09 00:25:20,877 | INFO     | sum of square deviations: 3922181170.480674
[2024-10-09 02:25:40] 2024-10-09 00:25:20,878 | INFO     | sum of deviations: -1898828228.6480663
[2024-10-09 02:25:40] 2024-10-09 00:25:20,878 | INFO     | mean x: 1728426354.0472102
[2024-10-09 02:25:40] 2024-10-09 00:25:20,878 | INFO     | mean y: 2266121.69527897
[2024-10-09 02:25:40] 2024-10-09 00:25:20,878 | INFO     | -- intersect: 839041530.4665887
[2024-10-09 02:25:40] 2024-10-09 00:25:20,878 | INFO     | intersect: 839041530.4665887
[2024-10-09 02:25:40] 2024-10-09 00:25:20,878 | INFO     | chi2: 3.5069861894081815
[2024-10-09 02:25:40] 2024-10-09 00:25:20,879 | INFO     | model: linear, x: [1728419278.0, 1728419339.0, 1728419400.0, 1728419461.0, 1728419522.0, 1728419583.0, 1728419644.0, 1728419705.0, 1728419766.0, 1728419827.0, 1728
[2024-10-09 02:25:40] 2024-10-09 00:25:20,879 | INFO     | sum of square deviations: 3675054310.4693055
[2024-10-09 02:25:40] 2024-10-09 00:25:20,880 | INFO     | sum of deviations: -1420082250.833334
[2024-10-09 02:25:40] 2024-10-09 00:25:20,880 | INFO     | mean x: 1728426201.5482457
[2024-10-09 02:25:40] 2024-10-09 00:25:20,880 | INFO     | mean y: 2266417.1666666665
[2024-10-09 02:25:40] 2024-10-09 00:25:20,880 | INFO     | -- intersect: 670149709.0412025
[2024-10-09 02:25:40] 2024-10-09 00:25:20,880 | INFO     | intersect: 670149709.0412025
[2024-10-09 02:25:40] 2024-10-09 00:25:20,880 | INFO     | chi2: 3.508094170835542
[2024-10-09 02:25:40] 2024-10-09 00:25:20,880 | INFO     | current chi2=3.508094170835542 (change=-0.03159354977521132 %)
[2024-10-09 02:25:40] 2024-10-09 00:25:20,880 | INFO     | right removable region: 227
[2024-10-09 02:25:40] 2024-10-09 00:25:20,881 | INFO     | model: linear, x: [1728419583.0, 1728419644.0, 1728419705.0, 1728419766.0, 1728419827.0, 1728419888.0, 1728419949.0, 1728420010.0, 1728420071.0, 1728420132.0, 1728
[2024-10-09 02:25:40] 2024-10-09 00:25:20,881 | INFO     | sum of square deviations: 3675047600.4693055
[2024-10-09 02:25:40] 2024-10-09 00:25:20,882 | INFO     | sum of deviations: -46976962010.67981
[2024-10-09 02:25:40] 2024-10-09 00:25:20,882 | INFO     | mean x: 1728426506.5482457
[2024-10-09 02:25:40] 2024-10-09 00:25:20,882 | INFO     | mean y: 2293827.9254385964
[2024-10-09 02:25:40] 2024-10-09 00:25:20,882 | INFO     | -- intersect: 22096218904.16123
[2024-10-09 02:25:40] 2024-10-09 00:25:20,882 | INFO     | intersect: 22096218904.16123
[2024-10-09 02:25:40] 2024-10-09 00:25:20,882 | INFO     | chi2: 1.4222479962207835
[2024-10-09 02:25:40] 2024-10-09 00:25:20,882 | INFO     | current chi2=1.4222479962207835 (change=59.44529235626121 %)
[2024-10-09 02:25:40] 2024-10-09 00:25:20,882 | INFO     | model: linear, x: [1728419888.0, 1728419949.0, 1728420010.0, 1728420071.0, 1728420132.0, 1728420193.0, 1728420254.0, 1728420315.0, 1728420376.0, 1728420437.0, 1728
[2024-10-09 02:25:40] 2024-10-09 00:25:20,883 | INFO     | sum of square deviations: 3438518880.45742
[2024-10-09 02:25:40] 2024-10-09 00:25:20,884 | INFO     | sum of deviations: -76782229273.31847
[2024-10-09 02:25:40] 2024-10-09 00:25:20,884 | INFO     | mean x: 1728426659.0493274
[2024-10-09 02:25:40] 2024-10-09 00:25:20,884 | INFO     | mean y: 2313044.2107623317
[2024-10-09 02:25:40] 2024-10-09 00:25:20,884 | INFO     | -- intersect: 38598131950.863625
[2024-10-09 02:25:40] 2024-10-09 00:25:20,884 | INFO     | intersect: 38598131950.863625
[2024-10-09 02:25:40] 2024-10-09 00:25:20,884 | INFO     | chi2: 0.5421856440207019
[2024-10-09 02:25:40] 2024-10-09 00:25:20,884 | INFO     | current chi2=0.5421856440207019 (change=61.87826275998244 %)
[2024-10-09 02:25:40] 2024-10-09 00:25:20,884 | INFO     | model: linear, x: [1728420193.0, 1728420254.0, 1728420315.0, 1728420376.0, 1728420437.0, 1728420498.0, 1728420559.0, 1728420620.0, 1728420681.0, 1728420742.0, 1728
[2024-10-09 02:25:40] 2024-10-09 00:25:20,884 | INFO     | sum of square deviations: 3212362447.9449534
[2024-10-09 02:25:40] 2024-10-09 00:25:20,885 | INFO     | sum of deviations: -71875471184.86235
[2024-10-09 02:25:40] 2024-10-09 00:25:20,885 | INFO     | mean x: 1728426811.5504587
[2024-10-09 02:25:40] 2024-10-09 00:25:20,886 | INFO     | mean y: 2309682.623853211
[2024-10-09 02:25:40] 2024-10-09 00:25:20,886 | INFO     | -- intersect: 38675246968.45634
[2024-10-09 02:25:40] 2024-10-09 00:25:20,886 | INFO     | intersect: 38675246968.45634
[2024-10-09 02:25:40] 2024-10-09 00:25:20,886 | INFO     | chi2: 0.5104095482046832
[2024-10-09 02:25:40] 2024-10-09 00:25:20,886 | INFO     | current chi2=0.5104095482046832 (change=5.860740904236375 %)
[2024-10-09 02:25:40] 2024-10-09 00:25:20,886 | INFO     | left removable region: 30
[2024-10-09 02:25:40] 2024-10-09 00:25:20,886 | INFO     | model: linear, x: [1728421108.0, 1728421169.0, 1728421230.0, 1728421291.0, 1728421352.0, 1728421413.0, 1728421474.0, 1728421535.0, 1728421596.0, 1728421657.0, 1728
[2024-10-09 02:25:40] 2024-10-09 00:25:20,886 | INFO     | sum of square deviations: 2370530392.3857813
[2024-10-09 02:25:40] 2024-10-09 00:25:20,887 | INFO     | sum of deviations: -35335895259.16245
[2024-10-09 02:25:40] 2024-10-09 00:25:20,887 | INFO     | mean x: 1728427086.0558376
[2024-10-09 02:25:40] 2024-10-09 00:25:20,887 | INFO     | mean y: 2284370.923857868
[2024-10-09 02:25:40] 2024-10-09 00:25:20,887 | INFO     | -- intersect: 25766779385.26535
[2024-10-09 02:25:40] 2024-10-09 00:25:20,887 | INFO     | intersect: 25766779385.26535
[2024-10-09 02:25:40] 2024-10-09 00:25:20,888 | INFO     | chi2: 0.3556704247014563
[2024-10-09 02:25:40] 2024-10-09 00:25:20,888 | INFO     | -- intersect: 25766779385.26535
[2024-10-09 02:25:40] 2024-10-09 00:25:20,888 | INFO     | current memory leak: -14.91 B/s (using 197 data points, chi2=0.36)
[2024-10-09 02:25:40] 2024-10-09 00:25:20,888 | INFO     | ..............................
[2024-10-09 02:25:40] 2024-10-09 00:25:20,888 | INFO     | . Timing measurements:
[2024-10-09 02:25:40] 2024-10-09 00:25:20,888 | INFO     | . get job = 0 s
[2024-10-09 02:25:40] 2024-10-09 00:25:20,888 | INFO     | . initial setup = 48 s
[2024-10-09 02:25:40] 2024-10-09 00:25:20,888 | INFO     | . payload setup = 3 s
[2024-10-09 02:25:40] 2024-10-09 00:25:20,888 | INFO     | . stage-in = 0 s
[2024-10-09 02:25:40] 2024-10-09 00:25:20,889 | INFO     | . payload execution = 14201 s
[2024-10-09 02:25:40] 2024-10-09 00:25:20,889 | INFO     | . stage-out = 1 s
[2024-10-09 02:25:40] 2024-10-09 00:25:20,889 | INFO     | . log creation = 0 s
[2024-10-09 02:25:40] 2024-10-09 00:25:20,889 | INFO     | ..............................
[2024-10-09 02:25:40] 2024-10-09 00:25:20,954 | INFO     | 
[2024-10-09 02:25:40] 2024-10-09 00:25:20,954 | INFO     | job summary report
[2024-10-09 02:25:40] 2024-10-09 00:25:20,954 | INFO     | --------------------------------------------------
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | PanDA job id: 6360829886
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | task id: 41481171
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | errors: (none)
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | pilot state: finished 
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | transexitcode: 0
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | exeerrorcode: 0
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | exeerrordiag: 
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | exitcode: 0
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | exitmsg: OK
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | cpuconsumptiontime: 26704 s
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | nevents: 400
[2024-10-09 02:25:40] 2024-10-09 00:25:20,955 | INFO     | neventsw: 0
[2024-10-09 02:25:40] 2024-10-09 00:25:20,956 | INFO     | pid: 2898880
[2024-10-09 02:25:40] 2024-10-09 00:25:20,956 | INFO     | pgrp: 2898880
[2024-10-09 02:25:40] 2024-10-09 00:25:20,956 | INFO     | corecount: 2
[2024-10-09 02:25:40] 2024-10-09 00:25:20,956 | INFO     | event service: False
[2024-10-09 02:25:40] 2024-10-09 00:25:20,956 | INFO     | sizes: {0: 2435128, 1: 2435327, 3: 2435533, 11: 2435561, 14208: 2466099, 14210: 2475137, 14212: 2475321, 14250: 2475491}
[2024-10-09 02:25:40] 2024-10-09 00:25:20,956 | INFO     | --------------------------------------------------
[2024-10-09 02:25:40] 2024-10-09 00:25:20,956 | INFO     | 
[2024-10-09 02:25:40] 2024-10-09 00:25:20,957 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-10-09 02:25:40] 2024-10-09 00:25:20,971 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | job 6360829886 has completed (purged errors)
[2024-10-09 02:25:40] 2024-10-09 00:25:20,973 | INFO     | overall cleanup function is called
[2024-10-09 02:25:40] 2024-10-09 00:25:21,978 | INFO     | --- collectZombieJob: --- 10, [2898880]
[2024-10-09 02:25:40] 2024-10-09 00:25:21,978 | INFO     | zombie collector waiting for pid 2898880
[2024-10-09 02:25:40] 2024-10-09 00:25:21,978 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-09 02:25:40] 2024-10-09 00:25:21,978 | INFO     | collected zombie processes
[2024-10-09 02:25:40] 2024-10-09 00:25:21,978 | INFO     | will  attempt to kill all subprocesses of pid=2898880
[2024-10-09 02:25:40] 2024-10-09 00:25:22,010 | INFO     | process IDs to be killed: [2898880] (in reverse order)
[2024-10-09 02:25:40] 2024-10-09 00:25:22,037 | WARNING  | found no corresponding commands to process id(s)
[2024-10-09 02:25:40] 2024-10-09 00:25:22,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-09 02:25:40] 2024-10-09 00:25:22,039 | INFO     | did not find any defunct processes belonging to 2898880
[2024-10-09 02:25:40] 2024-10-09 00:25:22,040 | INFO     | did not find any defunct processes belonging to 2898880
[2024-10-09 02:25:40] 2024-10-09 00:25:22,040 | INFO     | ready for new job
[2024-10-09 02:25:40] 2024-10-09 00:25:22,040 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-09 02:25:40] 2024-10-09 00:25:22,041 | INFO     | *************************************
[2024-10-09 02:25:40] 2024-10-09 00:25:22,041 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-09 02:25:40] 2024-10-09 00:25:22,041 | INFO     | *************************************
[2024-10-09 02:25:40] 2024-10-09 00:25:22,041 | INFO     | 
[2024-10-09 02:25:40] 2024-10-09 00:25:22,061 | INFO     | architecture information:
[2024-10-09 02:25:40] 2024-10-09 00:25:22,062 | INFO     | executing command: cat /etc/os-release
[2024-10-09 02:25:40] 2024-10-09 00:25:22,076 | INFO     | cat /etc/os-release:
[2024-10-09 02:25:40] NAME="CentOS Linux"
[2024-10-09 02:25:40] VERSION="7 (Core)"
[2024-10-09 02:25:40] ID="centos"
[2024-10-09 02:25:40] ID_LIKE="rhel fedora"
[2024-10-09 02:25:40] VERSION_ID="7"
[2024-10-09 02:25:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-09 02:25:40] ANSI_COLOR="0;31"
[2024-10-09 02:25:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-09 02:25:40] HOME_URL="https://www.centos.org/"
[2024-10-09 02:25:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-09 02:25:40] 
[2024-10-09 02:25:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-09 02:25:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-09 02:25:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-09 02:25:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-09 02:25:40] 
[2024-10-09 02:25:40] 2024-10-09 00:25:22,076 | INFO     | *************************************
[2024-10-09 02:25:40] 2024-10-09 00:25:22,579 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-10-09 02:25:40] 2024-10-09 00:25:22,593 | INFO     | sufficient remaining disk space (422885457920 B)
[2024-10-09 02:25:40] 2024-10-09 00:25:22,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-09 02:25:40] 2024-10-09 00:25:22,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-09 02:25:40] 2024-10-09 00:25:22,594 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-09 02:25:40] 2024-10-09 00:25:22,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-09 02:25:40] 2024-10-09 00:25:22,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-09 02:25:40] 2024-10-09 00:25:22,595 | INFO     | found 0 job(s) in 20 queues
[2024-10-09 02:25:40] 2024-10-09 00:25:22,595 | INFO     | aborting loop
[2024-10-09 02:25:40] 2024-10-09 00:25:22,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-09 02:25:40] 2024-10-09 00:25:22,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-09 02:25:40] 2024-10-09 00:25:22,837 | INFO     | all job control threads have been joined
[2024-10-09 02:25:40] 2024-10-09 00:25:23,333 | INFO     | all data control threads have been joined
[2024-10-09 02:25:40] 2024-10-09 00:25:23,599 | INFO     | [job] retrieve thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:23,600 | INFO     | [job] queue monitor thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:23,600 | INFO     | [job] job monitor thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:23,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-09 02:25:40] 2024-10-09 00:25:23,662 | INFO     | [data] copytool_in thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:23,842 | INFO     | [job] control thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:23,925 | INFO     | all payload control threads have been joined
[2024-10-09 02:25:40] 2024-10-09 00:25:24,010 | INFO     | [payload] failed_post thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:24,338 | INFO     | [data] control thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:24,449 | INFO     | [job] validate thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:24,461 | INFO     | [job] create_data_payload thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:24,463 | INFO     | [payload] validate_pre thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:24,733 | INFO     | [payload] validate_post thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:24,840 | INFO     | [payload] execute_payloads thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:24,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-09 02:25:40] 2024-10-09 00:25:24,931 | INFO     | [payload] control thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:25,611 | INFO     | [data] copytool_out thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:28,926 | INFO     | [data] queue_monitor thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:33,304 | INFO     | job.realtimelogging is not enabled
[2024-10-09 02:25:40] 2024-10-09 00:25:34,309 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-09 02:25:40] 2024-10-09 00:25:35,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140575209027392)>', '<ExcThread(monitor, started 140574480922368)>']
[2024-10-09 02:25:40] 2024-10-09 00:25:36,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-09 02:25:40] 2024-10-09 00:25:36,662 | INFO     | [monitor] control thread has ended
[2024-10-09 02:25:40] 2024-10-09 00:25:40,743 | INFO     | all workflow threads have been joined
[2024-10-09 02:25:40] 2024-10-09 00:25:40,743 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-09 02:25:40] 2024-10-09 00:25:40,744 | INFO     | traces error code: 0
[2024-10-09 02:25:40] 2024-10-09 00:25:40,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-09 02:25:40] 2024-10-09 00:25:40,827 [wrapper] ==== pilot stdout END ====
[2024-10-09 02:25:40] 2024-10-09 00:25:40,829 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-09 02:25:40] 2024-10-09 00:25:40,831 [wrapper] pilotpid: 2892540
[2024-10-09 02:25:40] 2024-10-09 00:25:40,832 [wrapper] Pilot exit status: 0
[2024-10-09 02:25:40] 2024-10-09 00:25:40,838 [wrapper] pandaids: 6360829886
[2024-10-09 02:25:40] 2024-10-09 00:25:40,850 [wrapper] cleanup supervisor_pilot 2924249 2892541
[2024-10-09 02:25:40] 2024-10-09 00:25:40,852 [wrapper] Test setup, not cleaning
[2024-10-09 02:25:40] 2024-10-09 00:25:40,854 [wrapper] ==== wrapper stdout END ====
[2024-10-09 02:25:40] 2024-10-09 00:25:40,855 [wrapper] ==== wrapper stderr END ====
[2024-10-09 02:25:40] 2024-10-09 00:25:40,858 [wrapper] apfmon messages muted
[2024-10-09 02:25:40]  *** Error codes and diagnostics ***
[2024-10-09 02:25:40]     "exeErrorCode": 0,
[2024-10-09 02:25:40]     "exeErrorDiag": "",
[2024-10-09 02:25:40]     "pilotErrorCode": 0,
[2024-10-09 02:25:40]     "pilotErrorDiag": "",
[2024-10-09 02:25:40]  *** Listing of results directory ***
[2024-10-09 02:25:40] total 447664
[2024-10-09 02:25:40] -rw-r--r-- 1 root root    484599 Oct  8 19:28 pilot3.tar.gz
[2024-10-09 02:25:40] -rwx------ 1 4871 1028     33942 Oct  8 19:50 runpilot2-wrapper.sh
[2024-10-09 02:25:40] -rw-r--r-- 1 root root      5653 Oct  8 19:50 queuedata.json
[2024-10-09 02:25:40] -rw-r--r-- 1 root root       100 Oct  8 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-09 02:25:40] -rwxr-xr-x 1 root root      7986 Oct  8 22:25 run_atlas
[2024-10-09 02:25:40] -rw-r--r-- 1 root root       105 Oct  8 22:25 job.xml
[2024-10-09 02:25:40] -rw-r--r-- 2 root root     17537 Oct  8 22:25 start_atlas.sh
[2024-10-09 02:25:40] drwxrwx--x 2 root root      4096 Oct  8 22:25 shared
[2024-10-09 02:25:40] -rw-r--r-- 2 root root    498188 Oct  8 22:25 input.tar.gz
[2024-10-09 02:25:40] -rw-r--r-- 1 root root      6134 Oct  8 22:25 init_data.xml
[2024-10-09 02:25:40] -rw-r--r-- 2 root root 301493334 Oct  8 22:25 EVNT.41239437._000184.pool.root.1
[2024-10-09 02:25:40] -rw-r--r-- 1 root root         0 Oct  8 22:25 boinc_lockfile
[2024-10-09 02:25:40] -rw-r--r-- 1 root root      2433 Oct  8 22:25 pandaJob.out
[2024-10-09 02:25:40] -rw------- 1 root root       424 Oct  8 22:25 setup.sh.local
[2024-10-09 02:25:40] -rw------- 1 root root   1023916 Oct  8 22:26 agis_schedconf.cvmfs.json
[2024-10-09 02:25:40] drwxr-xr-x 4  320  320      4096 Oct  8 22:27 pilot3
[2024-10-09 02:25:40] -rw------- 1 root root 149664757 Oct  9 02:24 HITS.41481171._005967.pool.root.1
[2024-10-09 02:25:40] -rw------- 1 root root      1031 Oct  9 02:24 memory_monitor_summary.json
[2024-10-09 02:25:40] -rw------- 1 root root   1615815 Oct  9 02:24 agis_ddmendpoints.agis.ALL.json
[2024-10-09 02:25:40] -rw------- 1 root root    303331 Oct  9 02:24 log.41481171._005967.job.log.tgz.1
[2024-10-09 02:25:40] -rw-r--r-- 1 root root       530 Oct  9 02:24 boinc_task_state.xml
[2024-10-09 02:25:40] -rw------- 1 root root        95 Oct  9 02:24 pilot_heartbeat.json
[2024-10-09 02:25:40] -rw-r--r-- 1 root root      8192 Oct  9 02:25 boinc_mmap_file
[2024-10-09 02:25:40] -rw-r--r-- 1 root root        28 Oct  9 02:25 wrapper_checkpoint.txt
[2024-10-09 02:25:40] -rw------- 1 root root      7696 Oct  9 02:25 heartbeat.json
[2024-10-09 02:25:40] -rw------- 1 root root      4414 Oct  9 02:25 pilotlog.txt
[2024-10-09 02:25:40] -rw------- 1 root root   1388519 Oct  9 02:25 log.41481171._005967.job.log.1
[2024-10-09 02:25:40] -rw------- 1 root root       357 Oct  9 02:25 output.list
[2024-10-09 02:25:40] -rw-r--r-- 1 root root       620 Oct  9 02:25 runtime_log
[2024-10-09 02:25:40] -rw------- 1 root root   1710080 Oct  9 02:25 result.tar.gz
[2024-10-09 02:25:40] -rw-r--r-- 1 root root     11091 Oct  9 02:25 runtime_log.err
[2024-10-09 02:25:40] -rw------- 1 root root       642 Oct  9 02:25 j8MODmNXTI6n9Rq4apOajLDm4fhM0noT9bVorHsSDmA7eKDmIrPjjn.diag
[2024-10-09 02:25:40] -rw-r--r-- 1 root root     21693 Oct  9 02:25 stderr.txt
[2024-10-09 02:25:40] HITS file was successfully produced:
[2024-10-09 02:25:40] -rw------- 1 root root 149664757 Oct  9 02:24 shared/HITS.pool.root.1
[2024-10-09 02:25:40]  *** Contents of shared directory: ***
[2024-10-09 02:25:40] total 442776
[2024-10-09 02:25:40] -rw-r--r-- 2 root root     17537 Oct  8 22:25 start_atlas.sh
[2024-10-09 02:25:40] -rw-r--r-- 2 root root    498188 Oct  8 22:25 input.tar.gz
[2024-10-09 02:25:40] -rw-r--r-- 2 root root 301493334 Oct  8 22:25 ATLAS.root_0
[2024-10-09 02:25:40] -rw------- 1 root root 149664757 Oct  9 02:24 HITS.pool.root.1
[2024-10-09 02:25:40] -rw------- 1 root root   1710080 Oct  9 02:25 result.tar.gz
02:25:42 (2888374): run_atlas exited; CPU time 26688.609131
02:25:42 (2888374): called boinc_finish(0)

</stderr_txt>
]]>

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