Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:31:32 (22056): wrapper (7.7.26015): starting
11:31:32 (22056): wrapper: running run_atlas (--nthreads 8)
[2024-10-08 11:31:32] Arguments: --nthreads 8
[2024-10-08 11:31:32] Threads: 8
[2024-10-08 11:31:32] Checking for CVMFS
[2024-10-08 11:31:32] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-08 11:31:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-08 11:31:33] Running cvmfs_config stat atlas.cern.ch
[2024-10-08 11:31:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-08 11:31:34] 2.11.2.0 14821 61286 78148 138103 3 59 19349921 25165824 4520 130560 0 41583443 99.952 21401001 8644 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-08 11:31:34] CVMFS is ok
[2024-10-08 11:31:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-08 11:31:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-08 11:31:34] Further information can be found at the LHC@home message board.
[2024-10-08 11:31:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-08 11:31:34] Checking for apptainer binary...
[2024-10-08 11:31:34] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-08 11:31:34] Running /usr/bin/apptainer --version
[2024-10-08 11:31:34] apptainer version 1.3.2-1.el7
[2024-10-08 11:31:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-08 11:31:48] cg-vwn356.simple-grid.lan
[2024-10-08 11:31:48] apptainer works
[2024-10-08 11:31:48] Set ATHENA_PROC_NUMBER=8
[2024-10-08 11:31:48] Set ATHENA_CORE_NUMBER=8
[2024-10-08 11:31:48] Starting ATLAS job with PandaID=6360046786
[2024-10-08 11:31:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-08 14:35:49]  *** The last 200 lines of the pilot log: ***
[2024-10-08 14:35:49] 2024-10-08 12:25:09,059 | INFO     | right removable region: 152
[2024-10-08 14:35:49] 2024-10-08 12:25:09,064 | INFO     | model: linear, x: [1728380872.0, 1728380933.0, 1728380994.0, 1728381055.0, 1728381116.0, 1728381177.0, 1728381238.0, 1728381299.0, 1728381360.0, 1728381421.0, 1728
[2024-10-08 14:35:49] 2024-10-08 12:25:09,065 | INFO     | sum of square deviations: 1110539892.0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,066 | INFO     | sum of deviations: 40825656598.99999
[2024-10-08 14:35:49] 2024-10-08 12:25:09,066 | INFO     | mean x: 1728385508.0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,066 | INFO     | mean y: 2420943.8758169934
[2024-10-08 14:35:49] 2024-10-08 12:25:09,066 | INFO     | -- intersect: -63536470120.37797
[2024-10-08 14:35:49] 2024-10-08 12:25:09,066 | INFO     | intersect: -63536470120.37797
[2024-10-08 14:35:49] 2024-10-08 12:25:09,066 | INFO     | chi2: 2.6701113760184136
[2024-10-08 14:35:49] 2024-10-08 12:25:09,067 | INFO     | current chi2=2.6701113760184136 (change=61.22092704267471 %)
[2024-10-08 14:35:49] 2024-10-08 12:25:09,067 | INFO     | model: linear, x: [1728381177.0, 1728381238.0, 1728381299.0, 1728381360.0, 1728381421.0, 1728381482.0, 1728381543.0, 1728381604.0, 1728381665.0, 1728381726.0, 1728
[2024-10-08 14:35:49] 2024-10-08 12:25:09,067 | INFO     | sum of square deviations: 1005179777.0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,068 | INFO     | sum of deviations: 11653539948.5
[2024-10-08 14:35:49] 2024-10-08 12:25:09,068 | INFO     | mean x: 1728385660.5
[2024-10-08 14:35:49] 2024-10-08 12:25:09,068 | INFO     | mean y: 2463129.614864865
[2024-10-08 14:35:49] 2024-10-08 12:25:09,068 | INFO     | -- intersect: -20035555742.158863
[2024-10-08 14:35:49] 2024-10-08 12:25:09,068 | INFO     | intersect: -20035555742.158863
[2024-10-08 14:35:49] 2024-10-08 12:25:09,069 | INFO     | chi2: 1.2131674057367592
[2024-10-08 14:35:49] 2024-10-08 12:25:09,069 | INFO     | current chi2=1.2131674057367592 (change=54.56491378476518 %)
[2024-10-08 14:35:49] 2024-10-08 12:25:09,069 | INFO     | model: linear, x: [1728381482.0, 1728381543.0, 1728381604.0, 1728381665.0, 1728381726.0, 1728381787.0, 1728381848.0, 1728381909.0, 1728381970.0, 1728382031.0, 1728
[2024-10-08 14:35:49] 2024-10-08 12:25:09,074 | INFO     | sum of square deviations: 906703512.0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,075 | INFO     | sum of deviations: -12111875191.0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,075 | INFO     | mean x: 1728385813.0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,076 | INFO     | mean y: 2499810.874125874
[2024-10-08 14:35:49] 2024-10-08 12:25:09,076 | INFO     | -- intersect: 23090524696.511787
[2024-10-08 14:35:49] 2024-10-08 12:25:09,076 | INFO     | intersect: 23090524696.511787
[2024-10-08 14:35:49] 2024-10-08 12:25:09,076 | INFO     | chi2: 0.1485880471356133
[2024-10-08 14:35:49] 2024-10-08 12:25:09,076 | INFO     | current chi2=0.1485880471356133 (change=87.75205742975137 %)
[2024-10-08 14:35:49] 2024-10-08 12:25:09,076 | INFO     | model: linear, x: [1728381787.0, 1728381848.0, 1728381909.0, 1728381970.0, 1728382031.0, 1728382092.0, 1728382153.0, 1728382214.0, 1728382275.0, 1728382336.0, 1728
[2024-10-08 14:35:49] 2024-10-08 12:25:09,076 | INFO     | sum of square deviations: 814878534.5
[2024-10-08 14:35:49] 2024-10-08 12:25:09,077 | INFO     | sum of deviations: -12223547494.5
[2024-10-08 14:35:49] 2024-10-08 12:25:09,077 | INFO     | mean x: 1728385965.5
[2024-10-08 14:35:49] 2024-10-08 12:25:09,077 | INFO     | mean y: 2499840.9782608696
[2024-10-08 14:35:49] 2024-10-08 12:25:09,078 | INFO     | -- intersect: 25929072997.160088
[2024-10-08 14:35:49] 2024-10-08 12:25:09,078 | INFO     | intersect: 25929072997.160088
[2024-10-08 14:35:49] 2024-10-08 12:25:09,078 | INFO     | chi2: 0.1020535350451224
[2024-10-08 14:35:49] 2024-10-08 12:25:09,078 | INFO     | current chi2=0.1020535350451224 (change=31.317803139319672 %)
[2024-10-08 14:35:49] 2024-10-08 12:25:09,078 | INFO     | model: linear, x: [1728382092.0, 1728382153.0, 1728382214.0, 1728382275.0, 1728382336.0, 1728382397.0, 1728382458.0, 1728382519.0, 1728382580.0, 1728382641.0, 1728
[2024-10-08 14:35:49] 2024-10-08 12:25:09,078 | INFO     | sum of square deviations: 729472282.0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,079 | INFO     | sum of deviations: -7477808037.0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,079 | INFO     | mean x: 1728386118.0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,079 | INFO     | mean y: 2491356.751879699
[2024-10-08 14:35:49] 2024-10-08 12:25:09,079 | INFO     | -- intersect: 17720148248.092995
[2024-10-08 14:35:49] 2024-10-08 12:25:09,079 | INFO     | intersect: 17720148248.092995
[2024-10-08 14:35:49] 2024-10-08 12:25:09,080 | INFO     | chi2: 0.07886626881390255
[2024-10-08 14:35:49] 2024-10-08 12:25:09,080 | INFO     | current chi2=0.07886626881390255 (change=22.720688921719116 %)
[2024-10-08 14:35:49] 2024-10-08 12:25:09,080 | INFO     | left removable region: 50
[2024-10-08 14:35:49] 2024-10-08 12:25:09,080 | INFO     | model: linear, x: [1728383617.0, 1728383678.0, 1728383739.0, 1728383800.0, 1728383861.0, 1728383922.0, 1728383983.0, 1728384044.0, 1728384105.0, 1728384166.0, 1728
[2024-10-08 14:35:49] 2024-10-08 12:25:09,080 | INFO     | sum of square deviations: 329031285.5
[2024-10-08 14:35:49] 2024-10-08 12:25:09,081 | INFO     | sum of deviations: 447096236.5
[2024-10-08 14:35:49] 2024-10-08 12:25:09,081 | INFO     | mean x: 1728386697.5
[2024-10-08 14:35:49] 2024-10-08 12:25:09,081 | INFO     | mean y: 2475357.4607843137
[2024-10-08 14:35:49] 2024-10-08 12:25:09,081 | INFO     | -- intersect: -2346101272.5536704
[2024-10-08 14:35:49] 2024-10-08 12:25:09,081 | INFO     | intersect: -2346101272.5536704
[2024-10-08 14:35:49] 2024-10-08 12:25:09,081 | INFO     | chi2: 2.5023634191108558e-05
[2024-10-08 14:35:49] 2024-10-08 12:25:09,082 | INFO     | -- intersect: -2346101272.5536704
[2024-10-08 14:35:49] 2024-10-08 12:25:09,082 | INFO     | current memory leak: 1.36 B/s (using 102 data points, chi2=0.00)
[2024-10-08 14:35:49] 2024-10-08 12:25:09,082 | INFO     | ..............................
[2024-10-08 14:35:49] 2024-10-08 12:25:09,083 | INFO     | . Timing measurements:
[2024-10-08 14:35:49] 2024-10-08 12:25:09,083 | INFO     | . get job = 0 s
[2024-10-08 14:35:49] 2024-10-08 12:25:09,083 | INFO     | . initial setup = 4 s
[2024-10-08 14:35:49] 2024-10-08 12:25:09,083 | INFO     | . payload setup = 122 s
[2024-10-08 14:35:49] 2024-10-08 12:25:09,083 | INFO     | . stage-in = 0 s
[2024-10-08 14:35:49] 2024-10-08 12:25:09,083 | INFO     | . payload execution = 9796 s
[2024-10-08 14:35:49] 2024-10-08 12:25:09,083 | INFO     | . stage-out = 3 s
[2024-10-08 14:35:49] 2024-10-08 12:25:09,083 | INFO     | . log creation = 2 s
[2024-10-08 14:35:49] 2024-10-08 12:25:09,083 | INFO     | ..............................
[2024-10-08 14:35:49] 2024-10-08 12:25:09,215 | INFO     | 
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | job summary report
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | --------------------------------------------------
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | PanDA job id: 6360046786
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | task id: 41481171
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | errors: (none)
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | pilot state: finished 
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | transexitcode: 0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | exeerrorcode: 0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | exeerrordiag: 
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | exitcode: 0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,216 | INFO     | exitmsg: OK
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | cpuconsumptiontime: 32891 s
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | nevents: 400
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | neventsw: 0
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | pid: 8838
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | pgrp: 8838
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | corecount: 8
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | event service: False
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | sizes: {0: 2435117, 1: 2435316, 12: 2435316, 23: 2435344, 33: 2435372, 44: 2435400, 55: 2435556, 66: 2435584, 76: 2435612, 87: 2435668, 92: 2435902, 98: 2436210, 9
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | --------------------------------------------------
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | 
[2024-10-08 14:35:49] 2024-10-08 12:25:09,217 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-10-08 14:35:49] 2024-10-08 12:25:09,774 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,774 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,774 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,776 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-08 14:35:49] 2024-10-08 12:25:09,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,776 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-08 14:35:49] 2024-10-08 12:25:09,776 | INFO     | job 6360046786 has completed (purged errors)
[2024-10-08 14:35:49] 2024-10-08 12:25:09,776 | INFO     | overall cleanup function is called
[2024-10-08 14:35:49] 2024-10-08 12:25:10,785 | INFO     | --- collectZombieJob: --- 10, [8838]
[2024-10-08 14:35:49] 2024-10-08 12:25:10,786 | INFO     | zombie collector waiting for pid 8838
[2024-10-08 14:35:49] 2024-10-08 12:25:10,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-08 14:35:49] 2024-10-08 12:25:10,786 | INFO     | collected zombie processes
[2024-10-08 14:35:49] 2024-10-08 12:25:10,786 | INFO     | will  attempt to kill all subprocesses of pid=8838
[2024-10-08 14:35:49] 2024-10-08 12:25:11,515 | INFO     | process IDs to be killed: [8838] (in reverse order)
[2024-10-08 14:35:49] 2024-10-08 12:25:12,257 | WARNING  | found no corresponding commands to process id(s)
[2024-10-08 14:35:49] 2024-10-08 12:25:12,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-08 14:35:49] 2024-10-08 12:25:12,261 | INFO     | did not find any defunct processes belonging to 8838
[2024-10-08 14:35:49] 2024-10-08 12:25:12,263 | INFO     | did not find any defunct processes belonging to 8838
[2024-10-08 14:35:49] 2024-10-08 12:25:12,264 | INFO     | ready for new job
[2024-10-08 14:35:49] 2024-10-08 12:25:12,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-08 14:35:49] 2024-10-08 12:25:12,266 | INFO     | *************************************
[2024-10-08 14:35:49] 2024-10-08 12:25:12,266 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-08 14:35:49] 2024-10-08 12:25:12,266 | INFO     | *************************************
[2024-10-08 14:35:49] 2024-10-08 12:25:12,266 | INFO     | 
[2024-10-08 14:35:49] 2024-10-08 12:25:12,267 | INFO     | pilot is running in a VM
[2024-10-08 14:35:49] 2024-10-08 12:25:12,267 | INFO     | architecture information:
[2024-10-08 14:35:49] 2024-10-08 12:25:12,269 | INFO     | executing command: cat /etc/os-release
[2024-10-08 14:35:49] 2024-10-08 12:25:12,413 | INFO     | cat /etc/os-release:
[2024-10-08 14:35:49] NAME="CentOS Linux"
[2024-10-08 14:35:49] VERSION="7 (Core)"
[2024-10-08 14:35:49] ID="centos"
[2024-10-08 14:35:49] ID_LIKE="rhel fedora"
[2024-10-08 14:35:49] VERSION_ID="7"
[2024-10-08 14:35:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-08 14:35:49] ANSI_COLOR="0;31"
[2024-10-08 14:35:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-08 14:35:49] HOME_URL="https://www.centos.org/"
[2024-10-08 14:35:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-08 14:35:49] 
[2024-10-08 14:35:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-08 14:35:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-08 14:35:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-08 14:35:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-08 14:35:49] 
[2024-10-08 14:35:49] 2024-10-08 12:25:12,413 | INFO     | *************************************
[2024-10-08 14:35:49] 2024-10-08 12:25:12,916 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-10-08 14:35:49] 2024-10-08 12:25:13,158 | INFO     | sufficient remaining disk space (488973008896 B)
[2024-10-08 14:35:49] 2024-10-08 12:25:13,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-08 14:35:49] 2024-10-08 12:25:13,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-08 14:35:49] 2024-10-08 12:25:13,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-08 14:35:49] 2024-10-08 12:25:13,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-08 14:35:49] 2024-10-08 12:25:13,362 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-08 14:35:49] 2024-10-08 12:25:13,363 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-08 14:35:49] 2024-10-08 12:25:13,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-08 14:35:49] 2024-10-08 12:25:13,363 | INFO     | will abort loop
[2024-10-08 14:35:49] 2024-10-08 12:25:13,432 | INFO     | found 0 job(s) in 20 queues
[2024-10-08 14:35:49] 2024-10-08 12:25:13,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-08 14:35:49] 2024-10-08 12:25:13,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-08 14:35:49] 2024-10-08 12:25:13,726 | INFO     | all job control threads have been joined
[2024-10-08 14:35:49] 2024-10-08 12:25:13,750 | INFO     | all data control threads have been joined
[2024-10-08 14:35:49] 2024-10-08 12:25:13,795 | INFO     | all payload control threads have been joined
[2024-10-08 14:35:49] 2024-10-08 12:25:14,164 | INFO     | [job] retrieve thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:14,209 | INFO     | [payload] execute_payloads thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:14,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-08 14:35:49] 2024-10-08 12:25:14,368 | INFO     | [job] job monitor thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:14,454 | INFO     | [payload] validate_post thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:14,488 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:14,732 | INFO     | [job] control thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:14,756 | INFO     | [data] control thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:14,801 | INFO     | [payload] control thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:14,827 | INFO     | [job] validate thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:14,908 | INFO     | [job] create_data_payload thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:15,170 | INFO     | [data] copytool_out thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:15,235 | INFO     | [job] queue monitor thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:15,341 | INFO     | [payload] validate_pre thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:15,638 | INFO     | [data] copytool_in thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:15,748 | INFO     | [payload] failed_post thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:17,168 | INFO     | [data] queue_monitor thread has finished
[2024-10-08 14:35:49] 2024-10-08 12:25:19,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761923172160)>', '<ExcThread(monitor, started 139761155028736)>']
[2024-10-08 14:35:49] 2024-10-08 12:25:19,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-08 14:35:49] 2024-10-08 12:25:19,469 | INFO     | [monitor] control thread has ended
[2024-10-08 14:35:49] 2024-10-08 12:25:24,096 | INFO     | all workflow threads have been joined
[2024-10-08 14:35:49] 2024-10-08 12:25:24,097 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-08 14:35:49] 2024-10-08 12:25:24,097 | INFO     | traces error code: 0
[2024-10-08 14:35:49] 2024-10-08 12:25:24,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-08 14:35:49] 2024-10-08 12:25:24,394 [wrapper] ==== pilot stdout END ====
[2024-10-08 14:35:49] 2024-10-08 12:25:24,400 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-08 14:35:49] 2024-10-08 12:25:24,408 [wrapper] pilotpid: 32132
[2024-10-08 14:35:49] 2024-10-08 12:25:24,414 [wrapper] Pilot exit status: 0
[2024-10-08 14:35:49] 2024-10-08 12:25:24,923 [wrapper] pandaids: 6360046786
[2024-10-08 14:35:49] 2024-10-08 12:25:25,684 [wrapper] cleanup supervisor_pilot  2746 32133
[2024-10-08 14:35:49] 2024-10-08 12:25:25,774 [wrapper] Test setup, not cleaning
[2024-10-08 14:35:49] 2024-10-08 12:25:25,835 [wrapper] ==== wrapper stdout END ====
[2024-10-08 14:35:49] 2024-10-08 12:25:25,930 [wrapper] ==== wrapper stderr END ====
[2024-10-08 14:35:49] 2024-10-08 12:25:26,067 [wrapper] apfmon messages muted
[2024-10-08 14:35:49]  *** Error codes and diagnostics ***
[2024-10-08 14:35:49]     "exeErrorCode": 0,
[2024-10-08 14:35:49]     "exeErrorDiag": "",
[2024-10-08 14:35:49]     "pilotErrorCode": 0,
[2024-10-08 14:35:49]     "pilotErrorDiag": "",
[2024-10-08 14:35:49]  *** Listing of results directory ***
[2024-10-08 14:35:49] total 430908
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc    484599 Oct  7 22:00 pilot3.tar.gz
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc      5653 Oct  7 22:39 queuedata.json
[2024-10-08 14:35:49] -rwx------. 1 boinc boinc     33942 Oct  7 22:39 runpilot2-wrapper.sh
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc       100 Oct  8 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-08 14:35:49] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 11:31 run_atlas
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc       105 Oct  8 11:31 job.xml
[2024-10-08 14:35:49] -rw-r--r--. 2 boinc boinc 297031143 Oct  8 11:31 EVNT.41239437._000049.pool.root.1
[2024-10-08 14:35:49] -rw-r--r--. 2 boinc boinc    498182 Oct  8 11:31 input.tar.gz
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc      6347 Oct  8 11:31 init_data.xml
[2024-10-08 14:35:49] -rw-r--r--. 2 boinc boinc     17537 Oct  8 11:31 start_atlas.sh
[2024-10-08 14:35:49] drwxrwx--x. 2 boinc boinc        68 Oct  8 11:31 shared
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc         0 Oct  8 11:31 boinc_lockfile
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc      2430 Oct  8 11:31 pandaJob.out
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc       424 Oct  8 11:31 setup.sh.local
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc   1024632 Oct  8 11:34 agis_schedconf.cvmfs.json
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc   1615815 Oct  8 11:34 agis_ddmendpoints.agis.ALL.json
[2024-10-08 14:35:49] drwx------. 4 boinc boinc      4096 Oct  8 11:34 pilot3
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc 137982570 Oct  8 14:22 HITS.41481171._001296.pool.root.1
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc       530 Oct  8 14:22 boinc_task_state.xml
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc      1017 Oct  8 14:23 memory_monitor_summary.json
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc    345126 Oct  8 14:23 log.41481171._001296.job.log.tgz.1
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc        95 Oct  8 14:24 pilot_heartbeat.json
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc      7691 Oct  8 14:25 heartbeat.json
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc      4460 Oct  8 14:25 pilotlog.txt
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc    840624 Oct  8 14:25 log.41481171._001296.job.log.1
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc       357 Oct  8 14:25 output.list
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc       620 Oct  8 14:25 runtime_log
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc   1208320 Oct  8 14:25 result.tar.gz
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc     10999 Oct  8 14:25 runtime_log.err
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc       644 Oct  8 14:25 2QAMDm8g9H6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmGItKDm989Kgm.diag
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc        27 Oct  8 14:35 wrapper_checkpoint.txt
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc      8192 Oct  8 14:35 boinc_mmap_file
[2024-10-08 14:35:49] -rw-r--r--. 1 boinc boinc     21559 Oct  8 14:35 stderr.txt
[2024-10-08 14:35:49] HITS file was successfully produced:
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc 137982570 Oct  8 14:22 shared/HITS.pool.root.1
[2024-10-08 14:35:49]  *** Contents of shared directory: ***
[2024-10-08 14:35:49] total 426512
[2024-10-08 14:35:49] -rw-r--r--. 2 boinc boinc 297031143 Oct  8 11:31 ATLAS.root_0
[2024-10-08 14:35:49] -rw-r--r--. 2 boinc boinc    498182 Oct  8 11:31 input.tar.gz
[2024-10-08 14:35:49] -rw-r--r--. 2 boinc boinc     17537 Oct  8 11:31 start_atlas.sh
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc 137982570 Oct  8 14:22 HITS.pool.root.1
[2024-10-08 14:35:49] -rw-------. 1 boinc boinc   1208320 Oct  8 14:25 result.tar.gz
14:35:51 (22056): run_atlas exited; CPU time 32864.010699
14:35:51 (22056): called boinc_finish(0)

</stderr_txt>
]]>

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