Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:48:44 (8687): wrapper (7.7.26015): starting
12:48:44 (8687): wrapper: running run_atlas (--nthreads 8)
[2024-10-08 12:48:44] Arguments: --nthreads 8
[2024-10-08 12:48:44] Threads: 8
[2024-10-08 12:48:44] Checking for CVMFS
[2024-10-08 12:48:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-08 12:48:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-08 12:48:45] Running cvmfs_config stat atlas.cern.ch
[2024-10-08 12:48:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-08 12:48:46] 2.11.2.0 7849 61381 95132 138104 0 245 20306543 25165825 4344 130560 0 41986503 99.922 23177741 8089 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-08 12:48:46] CVMFS is ok
[2024-10-08 12:48:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-08 12:48:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-08 12:48:46] Further information can be found at the LHC@home message board.
[2024-10-08 12:48:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-08 12:48:46] Checking for apptainer binary...
[2024-10-08 12:48:46] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-08 12:48:46] Running /usr/bin/apptainer --version
[2024-10-08 12:48:46] apptainer version 1.3.2-1.el7
[2024-10-08 12:48:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-08 12:48:53] cg-vwn278.simple-grid.lan
[2024-10-08 12:48:53] apptainer works
[2024-10-08 12:48:53] Set ATHENA_PROC_NUMBER=8
[2024-10-08 12:48:53] Set ATHENA_CORE_NUMBER=8
[2024-10-08 12:48:53] Starting ATLAS job with PandaID=6360003317
[2024-10-08 12:48:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-08 16:07:46]  *** The last 200 lines of the pilot log: ***
[2024-10-08 16:07:46] 2024-10-08 13:56:14,197 | INFO     | sum of square deviations: 1470248962.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,198 | INFO     | sum of deviations: 117450380910.5
[2024-10-08 16:07:46] 2024-10-08 13:56:14,199 | INFO     | mean x: 1728390266.5
[2024-10-08 16:07:46] 2024-10-08 13:56:14,199 | INFO     | mean y: 2357121.5178571427
[2024-10-08 16:07:46] 2024-10-08 13:56:14,199 | INFO     | -- intersect: -138069561586.9176
[2024-10-08 16:07:46] 2024-10-08 13:56:14,199 | INFO     | intersect: -138069561586.9176
[2024-10-08 16:07:46] 2024-10-08 13:56:14,199 | INFO     | chi2: 6.454601843561973
[2024-10-08 16:07:46] 2024-10-08 13:56:14,199 | INFO     | current chi2=6.454601843561973 (change=10.56168678314839 %)
[2024-10-08 16:07:46] 2024-10-08 13:56:14,199 | INFO     | right removable region: 167
[2024-10-08 16:07:46] 2024-10-08 13:56:14,200 | INFO     | model: linear, x: [1728385478.0, 1728385539.0, 1728385600.0, 1728385661.0, 1728385722.0, 1728385783.0, 1728385844.0, 1728385905.0, 1728385966.0, 1728386027.0, 1728
[2024-10-08 16:07:46] 2024-10-08 13:56:14,207 | INFO     | sum of square deviations: 1470248962.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,208 | INFO     | sum of deviations: 59813350896.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,209 | INFO     | mean x: 1728390571.5
[2024-10-08 16:07:46] 2024-10-08 13:56:14,209 | INFO     | mean y: 2404894.0714285714
[2024-10-08 16:07:46] 2024-10-08 13:56:14,209 | INFO     | -- intersect: -70312782812.53107
[2024-10-08 16:07:46] 2024-10-08 13:56:14,209 | INFO     | intersect: -70312782812.53107
[2024-10-08 16:07:46] 2024-10-08 13:56:14,209 | INFO     | chi2: 3.5275131067262233
[2024-10-08 16:07:46] 2024-10-08 13:56:14,209 | INFO     | current chi2=3.5275131067262233 (change=51.12094754061184 %)
[2024-10-08 16:07:46] 2024-10-08 13:56:14,209 | INFO     | model: linear, x: [1728385783.0, 1728385844.0, 1728385905.0, 1728385966.0, 1728386027.0, 1728386088.0, 1728386149.0, 1728386210.0, 1728386271.0, 1728386332.0, 1728
[2024-10-08 16:07:46] 2024-10-08 13:56:14,210 | INFO     | sum of square deviations: 1342841922.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,211 | INFO     | sum of deviations: 29319380380.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,211 | INFO     | mean x: 1728390724.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,211 | INFO     | mean y: 2441374.7239263803
[2024-10-08 16:07:46] 2024-10-08 13:56:14,211 | INFO     | -- intersect: -37734945470.29266
[2024-10-08 16:07:46] 2024-10-08 13:56:14,211 | INFO     | intersect: -37734945470.29266
[2024-10-08 16:07:46] 2024-10-08 13:56:14,211 | INFO     | chi2: 2.3089427984973163
[2024-10-08 16:07:46] 2024-10-08 13:56:14,211 | INFO     | current chi2=2.3089427984973163 (change=34.54474218409992 %)
[2024-10-08 16:07:46] 2024-10-08 13:56:14,212 | INFO     | model: linear, x: [1728386088.0, 1728386149.0, 1728386210.0, 1728386271.0, 1728386332.0, 1728386393.0, 1728386454.0, 1728386515.0, 1728386576.0, 1728386637.0, 1728
[2024-10-08 16:07:46] 2024-10-08 13:56:14,212 | INFO     | sum of square deviations: 1223016419.5
[2024-10-08 16:07:46] 2024-10-08 13:56:14,213 | INFO     | sum of deviations: -2575073642.000004
[2024-10-08 16:07:46] 2024-10-08 13:56:14,213 | INFO     | mean x: 1728390876.5
[2024-10-08 16:07:46] 2024-10-08 13:56:14,213 | INFO     | mean y: 2481854.810126582
[2024-10-08 16:07:46] 2024-10-08 13:56:14,213 | INFO     | -- intersect: 3641626610.501964
[2024-10-08 16:07:46] 2024-10-08 13:56:14,213 | INFO     | intersect: 3641626610.501964
[2024-10-08 16:07:46] 2024-10-08 13:56:14,213 | INFO     | chi2: 0.861691528106101
[2024-10-08 16:07:46] 2024-10-08 13:56:14,214 | INFO     | current chi2=0.861691528106101 (change=62.68025658033197 %)
[2024-10-08 16:07:46] 2024-10-08 13:56:14,214 | INFO     | model: linear, x: [1728386393.0, 1728386454.0, 1728386515.0, 1728386576.0, 1728386637.0, 1728386698.0, 1728386759.0, 1728386820.0, 1728386881.0, 1728386942.0, 1728
[2024-10-08 16:07:46] 2024-10-08 13:56:14,214 | INFO     | sum of square deviations: 1110539892.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,215 | INFO     | sum of deviations: -7248834228.000001
[2024-10-08 16:07:46] 2024-10-08 13:56:14,215 | INFO     | mean x: 1728391029.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,215 | INFO     | mean y: 2488096.431372549
[2024-10-08 16:07:46] 2024-10-08 13:56:14,215 | INFO     | -- intersect: 11284226051.670301
[2024-10-08 16:07:46] 2024-10-08 13:56:14,215 | INFO     | intersect: 11284226051.670301
[2024-10-08 16:07:46] 2024-10-08 13:56:14,216 | INFO     | chi2: 0.8025631545292357
[2024-10-08 16:07:46] 2024-10-08 13:56:14,216 | INFO     | current chi2=0.8025631545292357 (change=6.861895660831512 %)
[2024-10-08 16:07:46] 2024-10-08 13:56:14,216 | INFO     | left removable region: 40
[2024-10-08 16:07:46] 2024-10-08 13:56:14,216 | INFO     | model: linear, x: [1728387613.0, 1728387674.0, 1728387735.0, 1728387796.0, 1728387857.0, 1728387918.0, 1728387979.0, 1728388040.0, 1728388101.0, 1728388162.0, 1728
[2024-10-08 16:07:46] 2024-10-08 13:56:14,216 | INFO     | sum of square deviations: 635130048.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,217 | INFO     | sum of deviations: 889889472.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,217 | INFO     | mean x: 1728391456.0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,217 | INFO     | mean y: 2505496.070866142
[2024-10-08 16:07:46] 2024-10-08 13:56:14,217 | INFO     | -- intersect: -2419167616.4397097
[2024-10-08 16:07:46] 2024-10-08 13:56:14,217 | INFO     | intersect: -2419167616.4397097
[2024-10-08 16:07:46] 2024-10-08 13:56:14,218 | INFO     | chi2: 6.50499564068984e-05
[2024-10-08 16:07:46] 2024-10-08 13:56:14,218 | INFO     | -- intersect: -2419167616.4397097
[2024-10-08 16:07:46] 2024-10-08 13:56:14,218 | INFO     | current memory leak: 1.40 B/s (using 127 data points, chi2=0.00)
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | ..............................
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | . Timing measurements:
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | . get job = 0 s
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | . initial setup = 5 s
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | . payload setup = 122 s
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | . stage-in = 0 s
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | . payload execution = 10670 s
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | . stage-out = 3 s
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | . log creation = 1 s
[2024-10-08 16:07:46] 2024-10-08 13:56:14,219 | INFO     | ..............................
[2024-10-08 16:07:46] 2024-10-08 13:56:14,371 | INFO     | 
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | job summary report
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | --------------------------------------------------
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | PanDA job id: 6360003317
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | task id: 41081555
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | errors: (none)
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | pilot state: finished 
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | transexitcode: 0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | exeerrorcode: 0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | exeerrordiag: 
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | exitcode: 0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,372 | INFO     | exitmsg: OK
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | cpuconsumptiontime: 35933 s
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | nevents: 400
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | neventsw: 0
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | pid: 25187
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | pgrp: 25187
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | corecount: 8
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | event service: False
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | sizes: {0: 2435253, 1: 2435508, 2: 2435508, 12: 2435536, 23: 2435564, 34: 2435592, 44: 2435748, 55: 2435776, 66: 2435804, 77: 2435832, 86: 2436094, 87: 2436402, 10
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | --------------------------------------------------
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | 
[2024-10-08 16:07:46] 2024-10-08 13:56:14,373 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2024-10-08 16:07:46] 2024-10-08 13:56:14,723 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,724 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,724 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,724 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,725 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-08 16:07:46] 2024-10-08 13:56:14,726 | INFO     | job 6360003317 has completed (purged errors)
[2024-10-08 16:07:46] 2024-10-08 13:56:14,726 | INFO     | overall cleanup function is called
[2024-10-08 16:07:46] 2024-10-08 13:56:15,738 | INFO     | --- collectZombieJob: --- 10, [25187]
[2024-10-08 16:07:46] 2024-10-08 13:56:15,738 | INFO     | zombie collector waiting for pid 25187
[2024-10-08 16:07:46] 2024-10-08 13:56:15,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-08 16:07:46] 2024-10-08 13:56:15,738 | INFO     | collected zombie processes
[2024-10-08 16:07:46] 2024-10-08 13:56:15,738 | INFO     | will  attempt to kill all subprocesses of pid=25187
[2024-10-08 16:07:46] 2024-10-08 13:56:16,382 | INFO     | process IDs to be killed: [25187] (in reverse order)
[2024-10-08 16:07:46] 2024-10-08 13:56:16,960 | WARNING  | found no corresponding commands to process id(s)
[2024-10-08 16:07:46] 2024-10-08 13:56:16,961 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-08 16:07:46] 2024-10-08 13:56:16,964 | INFO     | did not find any defunct processes belonging to 25187
[2024-10-08 16:07:46] 2024-10-08 13:56:16,967 | INFO     | did not find any defunct processes belonging to 25187
[2024-10-08 16:07:46] 2024-10-08 13:56:16,967 | INFO     | ready for new job
[2024-10-08 16:07:46] 2024-10-08 13:56:16,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-08 16:07:46] 2024-10-08 13:56:16,969 | INFO     | *************************************
[2024-10-08 16:07:46] 2024-10-08 13:56:16,969 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-08 16:07:46] 2024-10-08 13:56:16,970 | INFO     | *************************************
[2024-10-08 16:07:46] 2024-10-08 13:56:16,970 | INFO     | 
[2024-10-08 16:07:46] 2024-10-08 13:56:16,971 | INFO     | pilot is running in a VM
[2024-10-08 16:07:46] 2024-10-08 13:56:16,971 | INFO     | architecture information:
[2024-10-08 16:07:46] 2024-10-08 13:56:16,982 | INFO     | executing command: cat /etc/os-release
[2024-10-08 16:07:46] 2024-10-08 13:56:17,159 | INFO     | cat /etc/os-release:
[2024-10-08 16:07:46] NAME="CentOS Linux"
[2024-10-08 16:07:46] VERSION="7 (Core)"
[2024-10-08 16:07:46] ID="centos"
[2024-10-08 16:07:46] ID_LIKE="rhel fedora"
[2024-10-08 16:07:46] VERSION_ID="7"
[2024-10-08 16:07:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-08 16:07:46] ANSI_COLOR="0;31"
[2024-10-08 16:07:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-08 16:07:46] HOME_URL="https://www.centos.org/"
[2024-10-08 16:07:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-08 16:07:46] 
[2024-10-08 16:07:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-08 16:07:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-08 16:07:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-08 16:07:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-08 16:07:46] 
[2024-10-08 16:07:46] 2024-10-08 13:56:17,160 | INFO     | *************************************
[2024-10-08 16:07:46] 2024-10-08 13:56:17,662 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2024-10-08 16:07:46] 2024-10-08 13:56:17,846 | INFO     | sufficient remaining disk space (489376710656 B)
[2024-10-08 16:07:46] 2024-10-08 13:56:17,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-08 16:07:46] 2024-10-08 13:56:17,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-08 16:07:46] 2024-10-08 13:56:17,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-08 16:07:46] 2024-10-08 13:56:17,915 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-08 16:07:46] 2024-10-08 13:56:17,915 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-08 16:07:46] 2024-10-08 13:56:17,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-08 16:07:46] 2024-10-08 13:56:17,915 | INFO     | will abort loop
[2024-10-08 16:07:46] 2024-10-08 13:56:18,003 | INFO     | all payload control threads have been joined
[2024-10-08 16:07:46] 2024-10-08 13:56:18,392 | INFO     | found 0 job(s) in 20 queues
[2024-10-08 16:07:46] 2024-10-08 13:56:18,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-08 16:07:46] 2024-10-08 13:56:18,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-08 16:07:46] 2024-10-08 13:56:18,642 | INFO     | all data control threads have been joined
[2024-10-08 16:07:46] 2024-10-08 13:56:18,852 | INFO     | [job] retrieve thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:18,881 | INFO     | [data] copytool_in thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:18,920 | INFO     | [job] job monitor thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:19,009 | INFO     | [payload] control thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:19,049 | INFO     | [payload] execute_payloads thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:19,078 | INFO     | [job] create_data_payload thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:19,098 | INFO     | all job control threads have been joined
[2024-10-08 16:07:46] 2024-10-08 13:56:19,314 | INFO     | [payload] failed_post thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:19,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-08 16:07:46] 2024-10-08 13:56:19,401 | INFO     | [payload] validate_post thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:19,617 | INFO     | [payload] validate_pre thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:19,648 | INFO     | [data] control thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:19,854 | INFO     | [data] copytool_out thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:19,979 | INFO     | [job] validate thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:20,104 | INFO     | [job] control thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:20,393 | INFO     | [job] queue monitor thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:20,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-08 16:07:46] 2024-10-08 13:56:24,955 | INFO     | [data] queue_monitor thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:28,114 | INFO     | job.realtimelogging is not enabled
[2024-10-08 16:07:46] 2024-10-08 13:56:29,120 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-08 16:07:46] 2024-10-08 13:56:29,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334574745408)>', '<ExcThread(monitor, started 140334122116864)>']
[2024-10-08 16:07:46] 2024-10-08 13:56:30,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-08 16:07:46] 2024-10-08 13:56:30,461 | INFO     | [monitor] control thread has ended
[2024-10-08 16:07:46] 2024-10-08 13:56:34,544 | INFO     | all workflow threads have been joined
[2024-10-08 16:07:46] 2024-10-08 13:56:34,544 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-08 16:07:46] 2024-10-08 13:56:34,544 | INFO     | traces error code: 0
[2024-10-08 16:07:46] 2024-10-08 13:56:34,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-08 16:07:46] 2024-10-08 13:56:34,925 [wrapper] ==== pilot stdout END ====
[2024-10-08 16:07:46] 2024-10-08 13:56:35,042 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-08 16:07:46] 2024-10-08 13:56:35,153 [wrapper] pilotpid: 17546
[2024-10-08 16:07:46] 2024-10-08 13:56:35,266 [wrapper] Pilot exit status: 0
[2024-10-08 16:07:46] 2024-10-08 13:56:35,731 [wrapper] pandaids: 6360003317
[2024-10-08 16:07:46] 2024-10-08 13:56:36,551 [wrapper] cleanup supervisor_pilot 25677 17547
[2024-10-08 16:07:46] 2024-10-08 13:56:36,620 [wrapper] Test setup, not cleaning
[2024-10-08 16:07:46] 2024-10-08 13:56:36,727 [wrapper] ==== wrapper stdout END ====
[2024-10-08 16:07:46] 2024-10-08 13:56:36,829 [wrapper] ==== wrapper stderr END ====
[2024-10-08 16:07:46] 2024-10-08 13:56:37,091 [wrapper] apfmon messages muted
[2024-10-08 16:07:46]  *** Error codes and diagnostics ***
[2024-10-08 16:07:46]     "exeErrorCode": 0,
[2024-10-08 16:07:46]     "exeErrorDiag": "",
[2024-10-08 16:07:46]     "pilotErrorCode": 0,
[2024-10-08 16:07:46]     "pilotErrorDiag": "",
[2024-10-08 16:07:46]  *** Listing of results directory ***
[2024-10-08 16:07:46] total 583528
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc    484599 Oct  7 21:02 pilot3.tar.gz
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc      5653 Oct  7 21:24 queuedata.json
[2024-10-08 16:07:46] -rwx------. 1 boinc boinc     33942 Oct  7 21:26 runpilot2-wrapper.sh
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc       100 Oct  8 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-08 16:07:46] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 12:48 run_atlas
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc       105 Oct  8 12:48 job.xml
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc      6346 Oct  8 12:48 init_data.xml
[2024-10-08 16:07:46] -rw-r--r--. 2 boinc boinc 437370385 Oct  8 12:48 EVNT.41081552._000040.pool.root.1
[2024-10-08 16:07:46] -rw-r--r--. 2 boinc boinc     17537 Oct  8 12:48 start_atlas.sh
[2024-10-08 16:07:46] drwxrwx--x. 2 boinc boinc        68 Oct  8 12:48 shared
[2024-10-08 16:07:46] -rw-r--r--. 2 boinc boinc    498211 Oct  8 12:48 input.tar.gz
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc         0 Oct  8 12:48 boinc_lockfile
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc      2564 Oct  8 12:48 pandaJob.out
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc       424 Oct  8 12:49 setup.sh.local
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc   1024640 Oct  8 12:51 agis_schedconf.cvmfs.json
[2024-10-08 16:07:46] drwx------. 4 boinc boinc      4096 Oct  8 12:51 pilot3
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc 153771867 Oct  8 15:53 HITS.41081555._001360.pool.root.1
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc       530 Oct  8 15:53 boinc_task_state.xml
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc      1020 Oct  8 15:54 memory_monitor_summary.json
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc   1615815 Oct  8 15:54 agis_ddmendpoints.agis.ALL.json
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc    343918 Oct  8 15:54 log.41081555._001360.job.log.tgz.1
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc        95 Oct  8 15:55 pilot_heartbeat.json
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc      7694 Oct  8 15:56 heartbeat.json
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc      4532 Oct  8 15:56 pilotlog.txt
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc    924481 Oct  8 15:56 log.41081555._001360.job.log.1
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc       357 Oct  8 15:56 output.list
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc       620 Oct  8 15:56 runtime_log
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc   1290240 Oct  8 15:56 result.tar.gz
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc     10999 Oct  8 15:56 runtime_log.err
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc       644 Oct  8 15:56 4S4MDm2X8H6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmnBtKDmYMk2Fn.diag
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc      8192 Oct  8 16:07 boinc_mmap_file
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc        27 Oct  8 16:07 wrapper_checkpoint.txt
[2024-10-08 16:07:46] -rw-r--r--. 1 boinc boinc     21431 Oct  8 16:07 stderr.txt
[2024-10-08 16:07:46] HITS file was successfully produced:
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc 153771867 Oct  8 15:53 shared/HITS.pool.root.1
[2024-10-08 16:07:46]  *** Contents of shared directory: ***
[2024-10-08 16:07:46] total 579056
[2024-10-08 16:07:46] -rw-r--r--. 2 boinc boinc 437370385 Oct  8 12:48 ATLAS.root_0
[2024-10-08 16:07:46] -rw-r--r--. 2 boinc boinc     17537 Oct  8 12:48 start_atlas.sh
[2024-10-08 16:07:46] -rw-r--r--. 2 boinc boinc    498211 Oct  8 12:48 input.tar.gz
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc 153771867 Oct  8 15:53 HITS.pool.root.1
[2024-10-08 16:07:46] -rw-------. 1 boinc boinc   1290240 Oct  8 15:56 result.tar.gz
16:07:48 (8687): run_atlas exited; CPU time 35897.267249
16:07:48 (8687): called boinc_finish(0)

</stderr_txt>
]]>

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