Name 22mKDmXdxG6n9Rq4apOajLDm4fhM0noT9bVorHsSDmwrdKDmF7WZfn_0
Workunit 225831791
Created 4 Oct 2024, 13:35:13 UTC
Sent 4 Oct 2024, 13:35:23 UTC
Report deadline 12 Oct 2024, 13:35:23 UTC
Received 5 Oct 2024, 3:10:39 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10837655
Run time 1 hours 30 min 30 sec
CPU time 6 hours 42 min 53 sec
Validate state Valid
Credit 311.58
Device peak FLOPS 30.41 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.64 GB
Peak swap size 3.02 GB
Peak disk usage 999.10 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:36:18 (1494458): wrapper (7.7.26015): starting
10:36:18 (1494458): wrapper: running run_atlas (--nthreads 6)
[2024-10-05 10:36:18] Arguments: --nthreads 6
[2024-10-05 10:36:18] Threads: 6
[2024-10-05 10:36:18] Checking for CVMFS
[2024-10-05 10:36:18] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-05 10:36:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-05 10:36:18] Running cvmfs_config stat atlas.cern.ch
[2024-10-05 10:36:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-05 10:36:19] 2.11.5.0 59890 2875 79984 137988 0 56 12046315 20971521 928 130560 0 4788102 99.995 554625 963 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-05 10:36:19] CVMFS is ok
[2024-10-05 10:36:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-05 10:36:19] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-05 10:36:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-05 10:36:19] Further information can be found at the LHC@home message board.
[2024-10-05 10:36:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-05 10:36:19] Checking for apptainer binary...
[2024-10-05 10:36:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-05 10:36:19] Running /usr/bin/apptainer --version
[2024-10-05 10:36:19] apptainer version 1.3.4-1.el9
[2024-10-05 10:36:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-05 10:36:19] testio005
[2024-10-05 10:36:19] apptainer works
[2024-10-05 10:36:19] Set ATHENA_PROC_NUMBER=6
[2024-10-05 10:36:19] Set ATHENA_CORE_NUMBER=6
[2024-10-05 10:36:19] Starting ATLAS job with PandaID=6356581011
[2024-10-05 10:36:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 12:06:43]  *** The last 200 lines of the pilot log: ***
[2024-10-05 12:06:43]  replicas=None
[2024-10-05 12:06:43]  scope=mc23_13p6TeV
[2024-10-05 12:06:43]  status=None
[2024-10-05 12:06:43]  status_code=0
[2024-10-05 12:06:43]  storage_token=
[2024-10-05 12:06:43]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6356581011/log.41079470._001117.job.log.tgz.1
[2024-10-05 12:06:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/75/log.41079470._001117.job.log.tgz.1
[2024-10-05 12:06:43]  workdir=None
[2024-10-05 12:06:43] ]
[2024-10-05 12:06:43] 2024-10-05 03:06:07,691 | INFO     | transferring file log.41079470._001117.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6356581011/log.41079470._001117.job.log.tgz.1 to /var/lib/boinc/slots/
[2024-10-05 12:06:43] 2024-10-05 03:06:07,691 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6356581011/log.41079470._001117.job.log.tgz.1 /var/lib/boinc/slots/2/log.41079470._001117.job
[2024-10-05 12:06:43] 2024-10-05 03:06:07,709 | INFO     | adding to output.list: log.41079470._001117.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/75/log.41079470._001117.job.log.tg
[2024-10-05 12:06:43] 2024-10-05 03:06:07,710 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-05 12:06:43] 2024-10-05 03:06:07,710 | INFO     | summary of transferred files:
[2024-10-05 12:06:43] 2024-10-05 03:06:07,710 | INFO     |  -- lfn=log.41079470._001117.job.log.tgz.1, status_code=0, status=transferred
[2024-10-05 12:06:43] 2024-10-05 03:06:07,710 | INFO     | stage-out finished correctly
[2024-10-05 12:06:43] 2024-10-05 03:06:09,004 | WARNING  | process 1504830 is no longer using CPU - aborting
[2024-10-05 12:06:43] 2024-10-05 03:06:09,861 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-05 12:06:43] 2024-10-05 03:06:09,940 | INFO     | job 6356581011 has state=finished
[2024-10-05 12:06:43] 2024-10-05 03:06:09,940 | INFO     | preparing for final server update for job 6356581011 in state='finished'
[2024-10-05 12:06:43] 2024-10-05 03:06:09,940 | INFO     | this job has now completed (state=finished)
[2024-10-05 12:06:43] 2024-10-05 03:06:09,941 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-05 12:06:43] 2024-10-05 03:06:09,941 | INFO     | log transfer has been attempted: DONE
[2024-10-05 12:06:43] 2024-10-05 03:06:09,941 | INFO     | job 6356581011 has finished - writing final server update
[2024-10-05 12:06:43] 2024-10-05 03:06:09,941 | INFO     | total number of processed events: 400 (read)
[2024-10-05 12:06:43] 2024-10-05 03:06:09,954 | INFO     | executing command: lscpu
[2024-10-05 12:06:43] 2024-10-05 03:06:09,991 | INFO     | found 8 cores (8 cores per socket, 1 sockets)
[2024-10-05 12:06:43] 2024-10-05 03:06:09,991 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-10-05 12:06:43] 2024-10-05 03:06:10,025 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-05 12:06:43] 2024-10-05 03:06:11,508 | INFO     | monitor loop #423: job 0:6356581011 is in state 'finished'
[2024-10-05 12:06:43] 2024-10-05 03:06:11,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-05 12:06:43] 2024-10-05 03:06:14,011 | INFO     | monitor loop #424: job 0:6356581011 is in state 'finished'
[2024-10-05 12:06:43] 2024-10-05 03:06:14,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-05 12:06:43] 2024-10-05 03:06:16,514 | INFO     | monitor loop #425: job 0:6356581011 is in state 'finished'
[2024-10-05 12:06:43] 2024-10-05 03:06:16,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-05 12:06:43] 2024-10-05 03:06:19,017 | INFO     | monitor loop #426: job 0:6356581011 is in state 'finished'
[2024-10-05 12:06:43] 2024-10-05 03:06:19,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-05 12:06:43] 2024-10-05 03:06:21,520 | INFO     | monitor loop #427: job 0:6356581011 is in state 'finished'
[2024-10-05 12:06:43] 2024-10-05 03:06:21,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-05 12:06:43] 2024-10-05 03:06:23,840 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-05 12:06:43] 2024-10-05 03:06:23,840 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6356581011/memory_monitor_summary.json (trf name=prmon)
[2024-10-05 12:06:43] 2024-10-05 03:06:23,841 | INFO     | extracted standard info from prmon json
[2024-10-05 12:06:43] 2024-10-05 03:06:23,841 | INFO     | extracted standard memory fields from prmon json
[2024-10-05 12:06:43] 2024-10-05 03:06:23,841 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-05 12:06:43] 2024-10-05 03:06:23,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-05 12:06:43] 2024-10-05 03:06:23,842 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-05 12:06:43] 2024-10-05 03:06:23,843 | INFO     | fitting pss+swap vs Time
[2024-10-05 12:06:43] 2024-10-05 03:06:23,843 | INFO     | model: linear, x: [1728092521.0, 1728092582.0, 1728092643.0, 1728092704.0, 1728092765.0, 1728092826.0, 1728092887.0, 1728092948.0, 1728093009.0, 1728093070.0, 1728
[2024-10-05 12:06:43] 2024-10-05 03:06:23,843 | INFO     | sum of square deviations: 164765880.0
[2024-10-05 12:06:43] 2024-10-05 03:06:23,843 | INFO     | sum of deviations: 22397119289.999996
[2024-10-05 12:06:43] 2024-10-05 03:06:23,844 | INFO     | mean x: 1728094961.0
[2024-10-05 12:06:43] 2024-10-05 03:06:23,844 | INFO     | mean y: 2383282.5061728396
[2024-10-05 12:06:43] 2024-10-05 03:06:23,844 | INFO     | -- intersect: -234902737765.40067
[2024-10-05 12:06:43] 2024-10-05 03:06:23,844 | INFO     | intersect: -234902737765.40067
[2024-10-05 12:06:43] 2024-10-05 03:06:23,844 | INFO     | chi2: 2.5234446998166637
[2024-10-05 12:06:43] 2024-10-05 03:06:23,844 | INFO     | -- intersect: -234902737765.40067
[2024-10-05 12:06:43] 2024-10-05 03:06:23,844 | INFO     | current memory leak: 135.93 B/s (using 81 data points, chi2=2.52)
[2024-10-05 12:06:43] 2024-10-05 03:06:23,844 | INFO     | ..............................
[2024-10-05 12:06:43] 2024-10-05 03:06:23,844 | INFO     | . Timing measurements:
[2024-10-05 12:06:43] 2024-10-05 03:06:23,845 | INFO     | . get job = 0 s
[2024-10-05 12:06:43] 2024-10-05 03:06:23,845 | INFO     | . initial setup = 6 s
[2024-10-05 12:06:43] 2024-10-05 03:06:23,845 | INFO     | . payload setup = 4 s
[2024-10-05 12:06:43] 2024-10-05 03:06:23,845 | INFO     | . stage-in = 0 s
[2024-10-05 12:06:43] 2024-10-05 03:06:23,845 | INFO     | . payload execution = 5351 s
[2024-10-05 12:06:43] 2024-10-05 03:06:23,845 | INFO     | . stage-out = 0 s
[2024-10-05 12:06:43] 2024-10-05 03:06:23,845 | INFO     | . log creation = 0 s
[2024-10-05 12:06:43] 2024-10-05 03:06:23,845 | INFO     | ..............................
[2024-10-05 12:06:43] 2024-10-05 03:06:23,910 | INFO     | 
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | job summary report
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | --------------------------------------------------
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | PanDA job id: 6356581011
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | task id: 41079470
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | errors: (none)
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | pilot state: finished 
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | transexitcode: 0
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | exeerrorcode: 0
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | exeerrordiag: 
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | exitcode: 0
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | exitmsg: OK
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | cpuconsumptiontime: 24215 s
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | nevents: 400
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | neventsw: 0
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | pid: 1504830
[2024-10-05 12:06:43] 2024-10-05 03:06:23,911 | INFO     | pgrp: 1504830
[2024-10-05 12:06:43] 2024-10-05 03:06:23,912 | INFO     | corecount: 6
[2024-10-05 12:06:43] 2024-10-05 03:06:23,912 | INFO     | event service: False
[2024-10-05 12:06:43] 2024-10-05 03:06:23,912 | INFO     | sizes: {0: 2435365, 1: 2435564, 4: 2435770, 11: 2435798, 5359: 2462257, 5360: 2462256, 5361: 2471464, 5363: 2471520, 5377: 2471690}
[2024-10-05 12:06:43] 2024-10-05 03:06:23,912 | INFO     | --------------------------------------------------
[2024-10-05 12:06:43] 2024-10-05 03:06:23,912 | INFO     | 
[2024-10-05 12:06:43] 2024-10-05 03:06:23,912 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-10-05 12:06:43] 2024-10-05 03:06:23,928 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,928 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,928 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,928 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 12:06:43] 2024-10-05 03:06:23,929 | INFO     | job 6356581011 has completed (purged errors)
[2024-10-05 12:06:43] 2024-10-05 03:06:23,930 | INFO     | overall cleanup function is called
[2024-10-05 12:06:43] 2024-10-05 03:06:24,936 | INFO     | --- collectZombieJob: --- 10, [1504830]
[2024-10-05 12:06:43] 2024-10-05 03:06:24,936 | INFO     | zombie collector waiting for pid 1504830
[2024-10-05 12:06:43] 2024-10-05 03:06:24,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 12:06:43] 2024-10-05 03:06:24,936 | INFO     | collected zombie processes
[2024-10-05 12:06:43] 2024-10-05 03:06:24,936 | INFO     | will  attempt to kill all subprocesses of pid=1504830
[2024-10-05 12:06:43] 2024-10-05 03:06:25,017 | INFO     | process IDs to be killed: [1504830] (in reverse order)
[2024-10-05 12:06:43] 2024-10-05 03:06:25,069 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 12:06:43] 2024-10-05 03:06:25,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 12:06:43] 2024-10-05 03:06:25,073 | INFO     | did not find any defunct processes belonging to 1504830
[2024-10-05 12:06:43] 2024-10-05 03:06:25,077 | INFO     | did not find any defunct processes belonging to 1504830
[2024-10-05 12:06:43] 2024-10-05 03:06:25,077 | INFO     | ready for new job
[2024-10-05 12:06:43] 2024-10-05 03:06:25,078 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 12:06:43] 2024-10-05 03:06:25,079 | INFO     | *************************************
[2024-10-05 12:06:43] 2024-10-05 03:06:25,079 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 12:06:43] 2024-10-05 03:06:25,079 | INFO     | *************************************
[2024-10-05 12:06:43] 2024-10-05 03:06:25,079 | INFO     | 
[2024-10-05 12:06:43] 2024-10-05 03:06:25,092 | INFO     | architecture information:
[2024-10-05 12:06:43] 2024-10-05 03:06:25,092 | INFO     | executing command: cat /etc/os-release
[2024-10-05 12:06:43] 2024-10-05 03:06:25,107 | INFO     | cat /etc/os-release:
[2024-10-05 12:06:43] NAME="CentOS Linux"
[2024-10-05 12:06:43] VERSION="7 (Core)"
[2024-10-05 12:06:43] ID="centos"
[2024-10-05 12:06:43] ID_LIKE="rhel fedora"
[2024-10-05 12:06:43] VERSION_ID="7"
[2024-10-05 12:06:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 12:06:43] ANSI_COLOR="0;31"
[2024-10-05 12:06:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 12:06:43] HOME_URL="https://www.centos.org/"
[2024-10-05 12:06:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 12:06:43] 
[2024-10-05 12:06:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 12:06:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 12:06:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 12:06:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 12:06:43] 
[2024-10-05 12:06:43] 2024-10-05 03:06:25,107 | INFO     | *************************************
[2024-10-05 12:06:43] 2024-10-05 03:06:25,610 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-10-05 12:06:43] 2024-10-05 03:06:25,627 | INFO     | sufficient remaining disk space (106417881088 B)
[2024-10-05 12:06:43] 2024-10-05 03:06:25,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 12:06:43] 2024-10-05 03:06:25,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 12:06:43] 2024-10-05 03:06:25,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 12:06:43] 2024-10-05 03:06:25,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 12:06:43] 2024-10-05 03:06:25,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 12:06:43] 2024-10-05 03:06:25,628 | INFO     | aborting loop
[2024-10-05 12:06:43] 2024-10-05 03:06:25,628 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-05 12:06:43] 2024-10-05 03:06:25,628 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 12:06:43] 2024-10-05 03:06:25,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 12:06:43] 2024-10-05 03:06:25,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 12:06:43] 2024-10-05 03:06:25,745 [wrapper] supervise_pilot (15 min periods counter: 7)
[2024-10-05 12:06:43] 2024-10-05 03:06:25,800 | INFO     | all job control threads have been joined
[2024-10-05 12:06:43] 2024-10-05 03:06:25,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 12:06:43] 2024-10-05 03:06:26,108 | INFO     | all data control threads have been joined
[2024-10-05 12:06:43] 2024-10-05 03:06:26,303 | INFO     | all payload control threads have been joined
[2024-10-05 12:06:43] 2024-10-05 03:06:26,633 | INFO     | [job] retrieve thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:26,633 | INFO     | [job] queue monitor thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:26,633 | INFO     | [job] job monitor thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:26,639 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:26,723 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:26,805 | INFO     | [job] control thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:26,832 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:26,985 | INFO     | [payload] validate_post thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:27,114 | INFO     | [data] control thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:27,245 | INFO     | [payload] failed_post thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:27,308 | INFO     | [payload] control thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:27,718 | INFO     | [data] copytool_in thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:27,737 | INFO     | [job] validate thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:27,823 | INFO     | [data] copytool_out thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:29,633 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:35,955 | INFO     | job.realtimelogging is not enabled
[2024-10-05 12:06:43] 2024-10-05 03:06:36,960 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 12:06:43] 2024-10-05 03:06:38,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554755794752)>', '<ExcThread(monitor, started 140554104973056)>']
[2024-10-05 12:06:43] 2024-10-05 03:06:39,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 12:06:43] 2024-10-05 03:06:39,683 | INFO     | [monitor] control thread has ended
[2024-10-05 12:06:43] 2024-10-05 03:06:43,728 | INFO     | all workflow threads have been joined
[2024-10-05 12:06:43] 2024-10-05 03:06:43,728 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 12:06:43] 2024-10-05 03:06:43,728 | INFO     | traces error code: 0
[2024-10-05 12:06:43] 2024-10-05 03:06:43,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 12:06:43] 2024-10-05 03:06:43,829 [wrapper] ==== pilot stdout END ====
[2024-10-05 12:06:43] 2024-10-05 03:06:43,831 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 12:06:43] 2024-10-05 03:06:43,833 [wrapper] pilotpid: 1498216
[2024-10-05 12:06:43] 2024-10-05 03:06:43,836 [wrapper] Pilot exit status: 0
[2024-10-05 12:06:43] 2024-10-05 03:06:43,845 [wrapper] pandaids: 6356581011
[2024-10-05 12:06:43] 2024-10-05 03:06:43,876 [wrapper] cleanup supervisor_pilot 1572874 1498217
[2024-10-05 12:06:43] 2024-10-05 03:06:43,879 [wrapper] Test setup, not cleaning
[2024-10-05 12:06:43] 2024-10-05 03:06:43,881 [wrapper] ==== wrapper stdout END ====
[2024-10-05 12:06:43] 2024-10-05 03:06:43,884 [wrapper] ==== wrapper stderr END ====
[2024-10-05 12:06:43] 2024-10-05 03:06:43,888 [wrapper] apfmon messages muted
[2024-10-05 12:06:43]  *** Error codes and diagnostics ***
[2024-10-05 12:06:43]     "exeErrorCode": 0,
[2024-10-05 12:06:43]     "exeErrorDiag": "",
[2024-10-05 12:06:43]     "pilotErrorCode": 0,
[2024-10-05 12:06:43]     "pilotErrorDiag": "",
[2024-10-05 12:06:43]  *** Listing of results directory ***
[2024-10-05 12:06:43] total 589748
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc    484599 Oct  4 21:55 pilot3.tar.gz
[2024-10-05 12:06:43] -rwx------. 1 boinc boinc     33814 Oct  4 22:34 runpilot2-wrapper.sh
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc      5653 Oct  4 22:34 queuedata.json
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc       100 Oct  5 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 12:06:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 10:36 run_atlas
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc       105 Oct  5 10:36 job.xml
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc      9352 Oct  5 10:36 init_data.xml
[2024-10-05 12:06:43] -rw-r--r--. 2 boinc boinc 442230735 Oct  5 10:36 EVNT.41079467._000012.pool.root.1
[2024-10-05 12:06:43] -rw-r--r--. 2 boinc boinc     17537 Oct  5 10:36 start_atlas.sh
[2024-10-05 12:06:43] drwxrwx--x. 2 boinc boinc        68 Oct  5 10:36 shared
[2024-10-05 12:06:43] -rw-r--r--. 2 boinc boinc    498172 Oct  5 10:36 input.tar.gz
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc         0 Oct  5 10:36 boinc_lockfile
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc      2570 Oct  5 10:36 pandaJob.out
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc       424 Oct  5 10:36 setup.sh.local
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc   1024498 Oct  5 10:36 agis_schedconf.cvmfs.json
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc   1615815 Oct  5 10:36 agis_ddmendpoints.agis.ALL.json
[2024-10-05 12:06:43] drwx------. 4 boinc boinc      4096 Oct  5 10:36 pilot3
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc        95 Oct  5 12:05 pilot_heartbeat.json
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc 156232980 Oct  5 12:05 HITS.41079470._001117.pool.root.1
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc       530 Oct  5 12:05 boinc_task_state.xml
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc      1015 Oct  5 12:06 memory_monitor_summary.json
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc    278823 Oct  5 12:06 log.41079470._001117.job.log.tgz.1
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc      7660 Oct  5 12:06 heartbeat.json
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc      8192 Oct  5 12:06 boinc_mmap_file
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc        27 Oct  5 12:06 wrapper_checkpoint.txt
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc      4407 Oct  5 12:06 pilotlog.txt
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc    509878 Oct  5 12:06 log.41079470._001117.job.log.1
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc       357 Oct  5 12:06 output.list
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc       620 Oct  5 12:06 runtime_log
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc    808960 Oct  5 12:06 result.tar.gz
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc     10957 Oct  5 12:06 runtime_log.err
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc       631 Oct  5 12:06 22mKDmXdxG6n9Rq4apOajLDm4fhM0noT9bVorHsSDmwrdKDmF7WZfn.diag
[2024-10-05 12:06:43] -rw-r--r--. 1 boinc boinc     22012 Oct  5 12:06 stderr.txt
[2024-10-05 12:06:43] HITS file was successfully produced:
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc 156232980 Oct  5 12:05 shared/HITS.pool.root.1
[2024-10-05 12:06:43]  *** Contents of shared directory: ***
[2024-10-05 12:06:43] total 585740
[2024-10-05 12:06:43] -rw-r--r--. 2 boinc boinc 442230735 Oct  5 10:36 ATLAS.root_0
[2024-10-05 12:06:43] -rw-r--r--. 2 boinc boinc     17537 Oct  5 10:36 start_atlas.sh
[2024-10-05 12:06:43] -rw-r--r--. 2 boinc boinc    498172 Oct  5 10:36 input.tar.gz
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc 156232980 Oct  5 12:05 HITS.pool.root.1
[2024-10-05 12:06:43] -rw-------. 1 boinc boinc    808960 Oct  5 12:06 result.tar.gz
12:06:45 (1494458): run_atlas exited; CPU time 24173.392465
12:06:45 (1494458): called boinc_finish(0)

</stderr_txt>
]]>


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