Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:17:00 (1100970): wrapper (7.7.26015): starting
02:17:00 (1100970): wrapper: running run_atlas (--nthreads 4)
[2024-10-05 02:17:00] Arguments: --nthreads 4
[2024-10-05 02:17:00] Threads: 4
[2024-10-05 02:17:00] Checking for CVMFS
[2024-10-05 02:17:00] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-05 02:17:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-05 02:17:00] Running cvmfs_config stat atlas.cern.ch
[2024-10-05 02:17:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-05 02:17:01] 2.11.5.0 604793 312 54388 137975 1 187 3596262 4096001 2810 130560 0 1546989 99.997 113681 931 http://s1ihep-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2024-10-05 02:17:01] CVMFS is ok
[2024-10-05 02:17:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-05 02:17:01] Checking for apptainer binary...
[2024-10-05 02:17:01] apptainer is not installed, using version from CVMFS
[2024-10-05 02:17:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-05 02:17:01] Zen
[2024-10-05 02:17:01] apptainer works
[2024-10-05 02:17:01] Set ATHENA_PROC_NUMBER=4
[2024-10-05 02:17:01] Set ATHENA_CORE_NUMBER=4
[2024-10-05 02:17:01] Starting ATLAS job with PandaID=6356483787
[2024-10-05 02:17:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 03:29:58]  *** The last 200 lines of the pilot log: ***
[2024-10-05 03:29:58]  direct_access_wan=False
[2024-10-05 03:29:58]  domain=
[2024-10-05 03:29:58]  filesize=224884
[2024-10-05 03:29:58]  filetype=log
[2024-10-05 03:29:58]  guid=f222485e-da11-46dd-846e-393096aa3480
[2024-10-05 03:29:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-10-05 03:29:58]  is_altstaged=None
[2024-10-05 03:29:58]  is_tar=False
[2024-10-05 03:29:58]  lfn=log.41079412._001679.job.log.tgz.1
[2024-10-05 03:29:58]  mtime=0
[2024-10-05 03:29:58]  protocol_id=None
[2024-10-05 03:29:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-05 03:29:58]  replicas=None
[2024-10-05 03:29:58]  scope=mc23_13p6TeV
[2024-10-05 03:29:58]  status=None
[2024-10-05 03:29:58]  status_code=0
[2024-10-05 03:29:58]  storage_token=
[2024-10-05 03:29:58]  surl=/home/michael/Boinc/BOINC/slots/16/PanDA_Pilot-6356483787/log.41079412._001679.job.log.tgz.1
[2024-10-05 03:29:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/35/log.41079412._001679.job.log.tgz.1
[2024-10-05 03:29:58]  workdir=None
[2024-10-05 03:29:58] ]
[2024-10-05 03:29:58] 2024-10-04 17:29:41,080 | INFO     | transferring file log.41079412._001679.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/16/PanDA_Pilot-6356483787/log.41079412._001679.job.log.tgz.1 to /home/mic
[2024-10-05 03:29:58] 2024-10-04 17:29:41,080 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/16/PanDA_Pilot-6356483787/log.41079412._001679.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/16/
[2024-10-05 03:29:58] 2024-10-04 17:29:41,096 | INFO     | adding to output.list: log.41079412._001679.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/35/log.41079412._001679.job.log.tg
[2024-10-05 03:29:58] 2024-10-04 17:29:41,096 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-05 03:29:58] 2024-10-04 17:29:41,096 | INFO     | summary of transferred files:
[2024-10-05 03:29:58] 2024-10-04 17:29:41,096 | INFO     |  -- lfn=log.41079412._001679.job.log.tgz.1, status_code=0, status=transferred
[2024-10-05 03:29:58] 2024-10-04 17:29:41,096 | INFO     | stage-out finished correctly
[2024-10-05 03:29:58] 2024-10-04 17:29:42,107 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-05 03:29:58] 2024-10-04 17:29:42,167 | INFO     | job 6356483787 has state=finished
[2024-10-05 03:29:58] 2024-10-04 17:29:42,167 | INFO     | preparing for final server update for job 6356483787 in state='finished'
[2024-10-05 03:29:58] 2024-10-04 17:29:42,168 | INFO     | this job has now completed (state=finished)
[2024-10-05 03:29:58] 2024-10-04 17:29:42,168 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-05 03:29:58] 2024-10-04 17:29:42,168 | INFO     | log transfer has been attempted: DONE
[2024-10-05 03:29:58] 2024-10-04 17:29:42,168 | INFO     | job 6356483787 has finished - writing final server update
[2024-10-05 03:29:58] 2024-10-04 17:29:42,168 | INFO     | total number of processed events: 400 (read)
[2024-10-05 03:29:58] 2024-10-04 17:29:42,170 | INFO     | executing command: lscpu
[2024-10-05 03:29:58] 2024-10-04 17:29:42,206 | INFO     | found 12 cores (12 cores per socket, 1 sockets)
[2024-10-05 03:29:58] 2024-10-04 17:29:42,206 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-10-05 03:29:58] 2024-10-04 17:29:42,226 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-05 03:29:58] 2024-10-04 17:29:43,379 | INFO     | monitor loop #345: job 0:6356483787 is in state 'finished'
[2024-10-05 03:29:58] 2024-10-04 17:29:43,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-05 03:29:58] 2024-10-04 17:29:44,613 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-05 03:29:58] 2024-10-04 17:29:44,614 | INFO     | using path: /home/michael/Boinc/BOINC/slots/16/PanDA_Pilot-6356483787/memory_monitor_summary.json (trf name=prmon)
[2024-10-05 03:29:58] 2024-10-04 17:29:44,614 | INFO     | extracted standard info from prmon json
[2024-10-05 03:29:58] 2024-10-04 17:29:44,614 | INFO     | extracted standard memory fields from prmon json
[2024-10-05 03:29:58] 2024-10-04 17:29:44,614 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-05 03:29:58] 2024-10-04 17:29:44,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-05 03:29:58] 2024-10-04 17:29:44,615 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-05 03:29:58] 2024-10-04 17:29:44,616 | INFO     | fitting pss+swap vs Time
[2024-10-05 03:29:58] 2024-10-04 17:29:44,616 | INFO     | model: linear, x: [1728058955.0, 1728059016.0, 1728059077.0, 1728059138.0, 1728059199.0, 1728059260.0, 1728059321.0, 1728059382.0, 1728059443.0, 1728059504.0, 1728
[2024-10-05 03:29:58] 2024-10-04 17:29:44,616 | INFO     | sum of square deviations: 81266640.0
[2024-10-05 03:29:58] 2024-10-04 17:29:44,616 | INFO     | sum of deviations: 511005814.5
[2024-10-05 03:29:58] 2024-10-04 17:29:44,616 | INFO     | mean x: 1728060876.5
[2024-10-05 03:29:58] 2024-10-04 17:29:44,616 | INFO     | mean y: 2366730.046875
[2024-10-05 03:29:58] 2024-10-04 17:29:44,616 | INFO     | -- intersect: -10863705199.363108
[2024-10-05 03:29:58] 2024-10-04 17:29:44,616 | INFO     | intersect: -10863705199.363108
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | chi2: 0.05172571098439726
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | -- intersect: -10863705199.363108
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | current memory leak: 6.29 B/s (using 64 data points, chi2=0.05)
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | ..............................
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | . Timing measurements:
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | . get job = 0 s
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | . initial setup = 5 s
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | . payload setup = 3 s
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | . stage-in = 0 s
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | . payload execution = 4328 s
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | . stage-out = 0 s
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | . log creation = 0 s
[2024-10-05 03:29:58] 2024-10-04 17:29:44,617 | INFO     | ..............................
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | 
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | job summary report
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | --------------------------------------------------
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | PanDA job id: 6356483787
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | task id: 41079412
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | errors: (none)
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | pilot state: finished 
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | transexitcode: 0
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | exeerrorcode: 0
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | exeerrordiag: 
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | exitcode: 0
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | exitmsg: OK
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | cpuconsumptiontime: 15905 s
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | nevents: 400
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | neventsw: 0
[2024-10-05 03:29:58] 2024-10-04 17:29:44,678 | INFO     | pid: 1117654
[2024-10-05 03:29:58] 2024-10-04 17:29:44,679 | INFO     | pgrp: 1117654
[2024-10-05 03:29:58] 2024-10-04 17:29:44,679 | INFO     | corecount: 4
[2024-10-05 03:29:58] 2024-10-04 17:29:44,679 | INFO     | event service: False
[2024-10-05 03:29:58] 2024-10-04 17:29:44,679 | INFO     | sizes: {0: 2435502, 2: 2435708, 11: 2435736, 4335: 2461774, 4337: 2470822, 4338: 2470878, 4340: 2471176}
[2024-10-05 03:29:58] 2024-10-04 17:29:44,679 | INFO     | --------------------------------------------------
[2024-10-05 03:29:58] 2024-10-04 17:29:44,679 | INFO     | 
[2024-10-05 03:29:58] 2024-10-04 17:29:44,679 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/16
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,697 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 03:29:58] 2024-10-04 17:29:44,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,697 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 03:29:58] 2024-10-04 17:29:44,697 | INFO     | job 6356483787 has completed (purged errors)
[2024-10-05 03:29:58] 2024-10-04 17:29:44,697 | INFO     | overall cleanup function is called
[2024-10-05 03:29:58] 2024-10-04 17:29:45,703 | INFO     | --- collectZombieJob: --- 10, [1117654]
[2024-10-05 03:29:58] 2024-10-04 17:29:45,704 | INFO     | zombie collector waiting for pid 1117654
[2024-10-05 03:29:58] 2024-10-04 17:29:45,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 03:29:58] 2024-10-04 17:29:45,704 | INFO     | collected zombie processes
[2024-10-05 03:29:58] 2024-10-04 17:29:45,704 | INFO     | will  attempt to kill all subprocesses of pid=1117654
[2024-10-05 03:29:58] 2024-10-04 17:29:45,777 | INFO     | process IDs to be killed: [1117654] (in reverse order)
[2024-10-05 03:29:58] 2024-10-04 17:29:45,834 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 03:29:58] 2024-10-04 17:29:45,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 03:29:58] 2024-10-04 17:29:45,837 | INFO     | did not find any defunct processes belonging to 1117654
[2024-10-05 03:29:58] 2024-10-04 17:29:45,840 | INFO     | did not find any defunct processes belonging to 1117654
[2024-10-05 03:29:58] 2024-10-04 17:29:45,840 | INFO     | ready for new job
[2024-10-05 03:29:58] 2024-10-04 17:29:45,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 03:29:58] 2024-10-04 17:29:45,841 | INFO     | *************************************
[2024-10-05 03:29:58] 2024-10-04 17:29:45,841 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 03:29:58] 2024-10-04 17:29:45,841 | INFO     | *************************************
[2024-10-05 03:29:58] 2024-10-04 17:29:45,841 | INFO     | 
[2024-10-05 03:29:58] 2024-10-04 17:29:45,842 | INFO     | architecture information:
[2024-10-05 03:29:58] 2024-10-04 17:29:45,843 | INFO     | executing command: cat /etc/os-release
[2024-10-05 03:29:58] 2024-10-04 17:29:45,855 | INFO     | cat /etc/os-release:
[2024-10-05 03:29:58] NAME="CentOS Linux"
[2024-10-05 03:29:58] VERSION="7 (Core)"
[2024-10-05 03:29:58] ID="centos"
[2024-10-05 03:29:58] ID_LIKE="rhel fedora"
[2024-10-05 03:29:58] VERSION_ID="7"
[2024-10-05 03:29:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 03:29:58] ANSI_COLOR="0;31"
[2024-10-05 03:29:58] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 03:29:58] HOME_URL="https://www.centos.org/"
[2024-10-05 03:29:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 03:29:58] 
[2024-10-05 03:29:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 03:29:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 03:29:58] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 03:29:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 03:29:58] 
[2024-10-05 03:29:58] 2024-10-04 17:29:45,855 | INFO     | *************************************
[2024-10-05 03:29:58] 2024-10-04 17:29:46,358 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/16
[2024-10-05 03:29:58] 2024-10-04 17:29:46,372 | INFO     | sufficient remaining disk space (386933981184 B)
[2024-10-05 03:29:58] 2024-10-04 17:29:46,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 03:29:58] 2024-10-04 17:29:46,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 03:29:58] 2024-10-04 17:29:46,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 03:29:58] 2024-10-04 17:29:46,431 | INFO     | all payload control threads have been joined
[2024-10-05 03:29:58] 2024-10-04 17:29:46,577 | INFO     | all data control threads have been joined
[2024-10-05 03:29:58] 2024-10-04 17:29:46,620 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 03:29:58] 2024-10-04 17:29:46,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 03:29:58] 2024-10-04 17:29:46,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 03:29:58] 2024-10-04 17:29:46,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 03:29:58] 2024-10-04 17:29:46,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 03:29:58] 2024-10-04 17:29:46,885 | INFO     | aborting loop
[2024-10-05 03:29:58] 2024-10-04 17:29:47,377 | INFO     | [job] retrieve thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:47,377 | INFO     | [job] queue monitor thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:47,423 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:47,435 | INFO     | [payload] control thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:47,574 | INFO     | [payload] failed_post thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:47,581 | INFO     | [data] control thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:47,668 | INFO     | [data] copytool_in thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:47,890 | INFO     | [job] job monitor thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:48,053 | INFO     | all job control threads have been joined
[2024-10-05 03:29:58] 2024-10-04 17:29:48,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 03:29:58] 2024-10-04 17:29:48,196 | INFO     | [payload] validate_post thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:48,293 | INFO     | [job] validate thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:48,445 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:48,513 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:48,551 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:48,669 | INFO     | [data] copytool_out thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:49,056 | INFO     | [job] control thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:52,179 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 03:29:58] 2024-10-04 17:29:53,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128370340734784)>', '<ExcThread(monitor, started 128369972741888)>']
[2024-10-05 03:29:58] 2024-10-04 17:29:53,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 03:29:58] 2024-10-04 17:29:53,652 | INFO     | [monitor] control thread has ended
[2024-10-05 03:29:58] 2024-10-04 17:29:58,546 | INFO     | all workflow threads have been joined
[2024-10-05 03:29:58] 2024-10-04 17:29:58,546 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 03:29:58] 2024-10-04 17:29:58,546 | INFO     | traces error code: 0
[2024-10-05 03:29:58] 2024-10-04 17:29:58,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 03:29:58] 2024-10-04 17:29:58,614 [wrapper] ==== pilot stdout END ====
[2024-10-05 03:29:58] 2024-10-04 17:29:58,616 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 03:29:58] 2024-10-04 17:29:58,618 [wrapper] pilotpid: 1104805
[2024-10-05 03:29:58] 2024-10-04 17:29:58,620 [wrapper] Pilot exit status: 0
[2024-10-05 03:29:58] 2024-10-04 17:29:58,626 [wrapper] pandaids: 6356483787
[2024-10-05 03:29:58] 2024-10-04 17:29:58,656 [wrapper] cleanup supervisor_pilot 1157570 1104806
[2024-10-05 03:29:58] 2024-10-04 17:29:58,658 [wrapper] Test setup, not cleaning
[2024-10-05 03:29:58] 2024-10-04 17:29:58,660 [wrapper] ==== wrapper stdout END ====
[2024-10-05 03:29:58] 2024-10-04 17:29:58,662 [wrapper] ==== wrapper stderr END ====
[2024-10-05 03:29:58] 2024-10-04 17:29:58,666 [wrapper] apfmon messages muted
[2024-10-05 03:29:58]  *** Error codes and diagnostics ***
[2024-10-05 03:29:58]     "exeErrorCode": 0,
[2024-10-05 03:29:58]     "exeErrorDiag": "",
[2024-10-05 03:29:58]     "pilotErrorCode": 0,
[2024-10-05 03:29:58]     "pilotErrorDiag": "",
[2024-10-05 03:29:58]  *** Listing of results directory ***
[2024-10-05 03:29:58] total 597464
[2024-10-05 03:29:58] -rw-r--r-- 1 michael michael    484599 Oct  4 22:05 pilot3.tar.gz
[2024-10-05 03:29:58] -rw-r--r-- 1 michael michael      5653 Oct  4 22:23 queuedata.json
[2024-10-05 03:29:58] -rwx------ 1 michael michael     33814 Oct  4 22:25 runpilot2-wrapper.sh
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael       100 Oct  5 02:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 03:29:58] -rwxr-xr-x 1 michael michael      7986 Oct  5 02:16 run_atlas
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael       105 Oct  5 02:16 job.xml
[2024-10-05 03:29:58] -rw-r--r-- 2 michael michael     17537 Oct  5 02:17 start_atlas.sh
[2024-10-05 03:29:58] drwxrwx--x 2 michael michael      4096 Oct  5 02:17 shared
[2024-10-05 03:29:58] -rw-r--r-- 2 michael michael    498189 Oct  5 02:17 input.tar.gz
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael      9873 Oct  5 02:17 init_data.xml
[2024-10-05 03:29:58] -rw-r--r-- 2 michael michael 446113610 Oct  5 02:17 EVNT.41079410._000031.pool.root.1
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael         0 Oct  5 02:17 boinc_lockfile
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael      2575 Oct  5 02:17 pandaJob.out
[2024-10-05 03:29:58] -rw------- 1 michael michael       460 Oct  5 02:17 setup.sh.local
[2024-10-05 03:29:58] -rw------- 1 michael michael   1024566 Oct  5 02:17 agis_schedconf.cvmfs.json
[2024-10-05 03:29:58] -rw------- 1 michael michael   1615815 Oct  5 02:17 agis_ddmendpoints.agis.ALL.json
[2024-10-05 03:29:58] drwx------ 4 michael michael      4096 Oct  5 02:17 pilot3
[2024-10-05 03:29:58] -rw------- 1 michael michael        95 Oct  5 03:29 pilot_heartbeat.json
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael       530 Oct  5 03:29 boinc_task_state.xml
[2024-10-05 03:29:58] -rw------- 1 michael michael 160480767 Oct  5 03:29 HITS.41079412._001679.pool.root.1
[2024-10-05 03:29:58] -rw------- 1 michael michael      1015 Oct  5 03:29 memory_monitor_summary.json
[2024-10-05 03:29:58] -rw------- 1 michael michael    224884 Oct  5 03:29 log.41079412._001679.job.log.tgz.1
[2024-10-05 03:29:58] -rw------- 1 michael michael      7622 Oct  5 03:29 heartbeat.json
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael      8192 Oct  5 03:29 boinc_mmap_file
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael        27 Oct  5 03:29 wrapper_checkpoint.txt
[2024-10-05 03:29:58] -rw------- 1 michael michael      4224 Oct  5 03:29 pilotlog.txt
[2024-10-05 03:29:58] -rw------- 1 michael michael    442387 Oct  5 03:29 log.41079412._001679.job.log.1
[2024-10-05 03:29:58] -rw------- 1 michael michael       357 Oct  5 03:29 output.list
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael       620 Oct  5 03:29 runtime_log
[2024-10-05 03:29:58] -rw------- 1 michael michael    686080 Oct  5 03:29 result.tar.gz
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael     11518 Oct  5 03:29 runtime_log.err
[2024-10-05 03:29:58] -rw------- 1 michael michael       627 Oct  5 03:29 MX2NDmEYwG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmTEsKDm6JGqzm.diag
[2024-10-05 03:29:58] -rw-rw-r-- 1 michael michael     20843 Oct  5 03:29 stderr.txt
[2024-10-05 03:29:58] HITS file was successfully produced:
[2024-10-05 03:29:58] -rw------- 1 michael michael 160480767 Oct  5 03:29 shared/HITS.pool.root.1
[2024-10-05 03:29:58]  *** Contents of shared directory: ***
[2024-10-05 03:29:58] total 593568
[2024-10-05 03:29:58] -rw-r--r-- 2 michael michael     17537 Oct  5 02:17 start_atlas.sh
[2024-10-05 03:29:58] -rw-r--r-- 2 michael michael    498189 Oct  5 02:17 input.tar.gz
[2024-10-05 03:29:58] -rw-r--r-- 2 michael michael 446113610 Oct  5 02:17 ATLAS.root_0
[2024-10-05 03:29:58] -rw------- 1 michael michael 160480767 Oct  5 03:29 HITS.pool.root.1
[2024-10-05 03:29:58] -rw------- 1 michael michael    686080 Oct  5 03:29 result.tar.gz
03:29:59 (1100970): run_atlas exited; CPU time 15861.891723
03:29:59 (1100970): called boinc_finish(0)

</stderr_txt>
]]>

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