Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:33 (16387): wrapper (7.7.26015): starting
03:32:33 (16387): wrapper: running run_atlas (--nthreads 8)
[2024-10-05 03:32:33] Arguments: --nthreads 8
[2024-10-05 03:32:33] Threads: 8
[2024-10-05 03:32:33] Checking for CVMFS
[2024-10-05 03:32:34] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-05 03:32:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-05 03:32:35] Running cvmfs_config stat atlas.cern.ch
[2024-10-05 03:32:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-05 03:32:35] 2.11.2.0 21441 56481 68780 137988 2 16 14553401 25165825 4518 130560 0 37071484 99.952 19957454 8536 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-05 03:32:35] CVMFS is ok
[2024-10-05 03:32:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-05 03:32:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-05 03:32:36] Further information can be found at the LHC@home message board.
[2024-10-05 03:32:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-05 03:32:36] Checking for apptainer binary...
[2024-10-05 03:32:36] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-05 03:32:36] Running /usr/bin/apptainer --version
[2024-10-05 03:32:36] apptainer version 1.3.2-1.el7
[2024-10-05 03:32:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-05 03:52:04] cg-vwn327.simple-grid.lan
[2024-10-05 03:52:04] apptainer works
[2024-10-05 03:52:04] Set ATHENA_PROC_NUMBER=8
[2024-10-05 03:52:04] Set ATHENA_CORE_NUMBER=8
[2024-10-05 03:52:04] Starting ATLAS job with PandaID=6355404966
[2024-10-05 03:52:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 11:14:08]  *** The last 200 lines of the pilot log: ***
[2024-10-05 11:14:08] 2024-10-05 08:37:05,624 | INFO     | right removable region: 381
[2024-10-05 11:14:08] 2024-10-05 08:37:05,625 | INFO     | model: linear, x: [1728094071.0, 1728094132.0, 1728094193.0, 1728094254.0, 1728094315.0, 1728094376.0, 1728094437.0, 1728094498.0, 1728094559.0, 1728094620.0, 1728
[2024-10-05 11:14:08] 2024-10-05 08:37:05,625 | INFO     | sum of square deviations: 17284846875.5
[2024-10-05 11:14:08] 2024-10-05 08:37:05,630 | INFO     | sum of deviations: 186151175820.0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,630 | INFO     | mean x: 1728105691.5
[2024-10-05 11:14:08] 2024-10-05 08:37:05,630 | INFO     | mean y: 2488295.9633507854
[2024-10-05 11:14:08] 2024-10-05 08:37:05,630 | INFO     | -- intersect: -18608547643.841793
[2024-10-05 11:14:08] 2024-10-05 08:37:05,631 | INFO     | intersect: -18608547643.841793
[2024-10-05 11:14:08] 2024-10-05 08:37:05,631 | INFO     | chi2: 4.816160959794256
[2024-10-05 11:14:08] 2024-10-05 08:37:05,631 | INFO     | current chi2=4.816160959794256 (change=43.499279067593335 %)
[2024-10-05 11:14:08] 2024-10-05 08:37:05,632 | INFO     | model: linear, x: [1728094376.0, 1728094437.0, 1728094498.0, 1728094559.0, 1728094620.0, 1728094681.0, 1728094742.0, 1728094803.0, 1728094864.0, 1728094925.0, 1728
[2024-10-05 11:14:08] 2024-10-05 08:37:05,632 | INFO     | sum of square deviations: 16614964548.0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,642 | INFO     | sum of deviations: 105032432088.99997
[2024-10-05 11:14:08] 2024-10-05 08:37:05,642 | INFO     | mean x: 1728105844.0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,642 | INFO     | mean y: 2506762.925729443
[2024-10-05 11:14:08] 2024-10-05 08:37:05,642 | INFO     | -- intersect: -10921811443.000422
[2024-10-05 11:14:08] 2024-10-05 08:37:05,642 | INFO     | intersect: -10921811443.000422
[2024-10-05 11:14:08] 2024-10-05 08:37:05,643 | INFO     | chi2: 3.195141488488737
[2024-10-05 11:14:08] 2024-10-05 08:37:05,643 | INFO     | current chi2=3.195141488488737 (change=33.65791726725777 %)
[2024-10-05 11:14:08] 2024-10-05 08:37:05,643 | INFO     | model: linear, x: [1728094681.0, 1728094742.0, 1728094803.0, 1728094864.0, 1728094925.0, 1728094986.0, 1728095047.0, 1728095108.0, 1728095169.0, 1728095230.0, 1728
[2024-10-05 11:14:08] 2024-10-05 08:37:05,644 | INFO     | sum of square deviations: 15962617433.0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,648 | INFO     | sum of deviations: 18171734567.999992
[2024-10-05 11:14:08] 2024-10-05 08:37:05,648 | INFO     | mean x: 1728105996.5
[2024-10-05 11:14:08] 2024-10-05 08:37:05,648 | INFO     | mean y: 2527069.3387096776
[2024-10-05 11:14:08] 2024-10-05 08:37:05,648 | INFO     | -- intersect: -1964736984.0393667
[2024-10-05 11:14:08] 2024-10-05 08:37:05,648 | INFO     | intersect: -1964736984.0393667
[2024-10-05 11:14:08] 2024-10-05 08:37:05,649 | INFO     | chi2: 1.3471252849295552
[2024-10-05 11:14:08] 2024-10-05 08:37:05,649 | INFO     | current chi2=1.3471252849295552 (change=57.838321408210035 %)
[2024-10-05 11:14:08] 2024-10-05 08:37:05,650 | INFO     | model: linear, x: [1728094986.0, 1728095047.0, 1728095108.0, 1728095169.0, 1728095230.0, 1728095291.0, 1728095352.0, 1728095413.0, 1728095474.0, 1728095535.0, 1728
[2024-10-05 11:14:08] 2024-10-05 08:37:05,659 | INFO     | sum of square deviations: 15327572968.0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,663 | INFO     | sum of deviations: -22076623643.000004
[2024-10-05 11:14:08] 2024-10-05 08:37:05,664 | INFO     | mean x: 1728106149.0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,664 | INFO     | mean y: 2536695.6403269754
[2024-10-05 11:14:08] 2024-10-05 08:37:05,664 | INFO     | -- intersect: 2491564093.929408
[2024-10-05 11:14:08] 2024-10-05 08:37:05,664 | INFO     | intersect: 2491564093.929408
[2024-10-05 11:14:08] 2024-10-05 08:37:05,664 | INFO     | chi2: 0.8232274766205396
[2024-10-05 11:14:08] 2024-10-05 08:37:05,665 | INFO     | current chi2=0.8232274766205396 (change=38.890058272227556 %)
[2024-10-05 11:14:08] 2024-10-05 08:37:05,665 | INFO     | model: linear, x: [1728095291.0, 1728095352.0, 1728095413.0, 1728095474.0, 1728095535.0, 1728095596.0, 1728095657.0, 1728095718.0, 1728095779.0, 1728095840.0, 1728
[2024-10-05 11:14:08] 2024-10-05 08:37:05,665 | INFO     | sum of square deviations: 14709598590.5
[2024-10-05 11:14:08] 2024-10-05 08:37:05,669 | INFO     | sum of deviations: -28314720597.500004
[2024-10-05 11:14:08] 2024-10-05 08:37:05,669 | INFO     | mean x: 1728106301.5
[2024-10-05 11:14:08] 2024-10-05 08:37:05,669 | INFO     | mean y: 2538224.76519337
[2024-10-05 11:14:08] 2024-10-05 08:37:05,670 | INFO     | -- intersect: 3328995217.3681693
[2024-10-05 11:14:08] 2024-10-05 08:37:05,670 | INFO     | intersect: 3328995217.3681693
[2024-10-05 11:14:08] 2024-10-05 08:37:05,670 | INFO     | chi2: 0.8013797538341126
[2024-10-05 11:14:08] 2024-10-05 08:37:05,670 | INFO     | current chi2=0.8013797538341126 (change=2.653910784916322 %)
[2024-10-05 11:14:08] 2024-10-05 08:37:05,670 | INFO     | left removable region: 50
[2024-10-05 11:14:08] 2024-10-05 08:37:05,671 | INFO     | model: linear, x: [1728096816.0, 1728096877.0, 1728096938.0, 1728096999.0, 1728097060.0, 1728097121.0, 1728097182.0, 1728097243.0, 1728097304.0, 1728097365.0, 1728
[2024-10-05 11:14:08] 2024-10-05 08:37:05,671 | INFO     | sum of square deviations: 11244973630.0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,675 | INFO     | sum of deviations: 576089978.0000032
[2024-10-05 11:14:08] 2024-10-05 08:37:05,675 | INFO     | mean x: 1728106881.0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,675 | INFO     | mean y: 2543071.2960725077
[2024-10-05 11:14:08] 2024-10-05 08:37:05,675 | INFO     | -- intersect: -85989377.76196446
[2024-10-05 11:14:08] 2024-10-05 08:37:05,675 | INFO     | intersect: -85989377.76196446
[2024-10-05 11:14:08] 2024-10-05 08:37:05,676 | INFO     | chi2: 0.012962867274226443
[2024-10-05 11:14:08] 2024-10-05 08:37:05,676 | INFO     | -- intersect: -85989377.76196446
[2024-10-05 11:14:08] 2024-10-05 08:37:05,676 | INFO     | current memory leak: 0.05 B/s (using 331 data points, chi2=0.01)
[2024-10-05 11:14:08] 2024-10-05 08:37:05,677 | INFO     | ..............................
[2024-10-05 11:14:08] 2024-10-05 08:37:05,678 | INFO     | . Timing measurements:
[2024-10-05 11:14:08] 2024-10-05 08:37:05,678 | INFO     | . get job = 0 s
[2024-10-05 11:14:08] 2024-10-05 08:37:05,678 | INFO     | . initial setup = 4 s
[2024-10-05 11:14:08] 2024-10-05 08:37:05,678 | INFO     | . payload setup = 114 s
[2024-10-05 11:14:08] 2024-10-05 08:37:05,678 | INFO     | . stage-in = 0 s
[2024-10-05 11:14:08] 2024-10-05 08:37:05,678 | INFO     | . payload execution = 23721 s
[2024-10-05 11:14:08] 2024-10-05 08:37:05,678 | INFO     | . stage-out = 3 s
[2024-10-05 11:14:08] 2024-10-05 08:37:05,678 | INFO     | . log creation = 1 s
[2024-10-05 11:14:08] 2024-10-05 08:37:05,678 | INFO     | ..............................
[2024-10-05 11:14:08] 2024-10-05 08:37:05,875 | INFO     | 
[2024-10-05 11:14:08] 2024-10-05 08:37:05,875 | INFO     | job summary report
[2024-10-05 11:14:08] 2024-10-05 08:37:05,875 | INFO     | --------------------------------------------------
[2024-10-05 11:14:08] 2024-10-05 08:37:05,875 | INFO     | PanDA job id: 6355404966
[2024-10-05 11:14:08] 2024-10-05 08:37:05,875 | INFO     | task id: 41481139
[2024-10-05 11:14:08] 2024-10-05 08:37:05,875 | INFO     | errors: (none)
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | pilot state: finished 
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | transexitcode: 0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | exeerrorcode: 0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | exeerrordiag: 
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | exitcode: 0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | exitmsg: OK
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | cpuconsumptiontime: 87350 s
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | nevents: 400
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | neventsw: 0
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | pid: 13168
[2024-10-05 11:14:08] 2024-10-05 08:37:05,876 | INFO     | pgrp: 13168
[2024-10-05 11:14:08] 2024-10-05 08:37:05,877 | INFO     | corecount: 8
[2024-10-05 11:14:08] 2024-10-05 08:37:05,877 | INFO     | event service: False
[2024-10-05 11:14:08] 2024-10-05 08:37:05,877 | INFO     | sizes: {0: 2435316, 1: 2435515, 12: 2435515, 23: 2435543, 33: 2435571, 44: 2435599, 55: 2435755, 66: 2435783, 76: 2435811, 87: 2435867, 91: 2436101, 98: 2436409, 2
[2024-10-05 11:14:08] 2024-10-05 08:37:05,877 | INFO     | --------------------------------------------------
[2024-10-05 11:14:08] 2024-10-05 08:37:05,877 | INFO     | 
[2024-10-05 11:14:08] 2024-10-05 08:37:05,877 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2024-10-05 11:14:08] 2024-10-05 08:37:06,213 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,214 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,214 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,214 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,215 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 11:14:08] 2024-10-05 08:37:06,216 | INFO     | job 6355404966 has completed (purged errors)
[2024-10-05 11:14:08] 2024-10-05 08:37:06,216 | INFO     | overall cleanup function is called
[2024-10-05 11:14:08] 2024-10-05 08:37:07,225 | INFO     | --- collectZombieJob: --- 10, [13168]
[2024-10-05 11:14:08] 2024-10-05 08:37:07,225 | INFO     | zombie collector waiting for pid 13168
[2024-10-05 11:14:08] 2024-10-05 08:37:07,225 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 11:14:08] 2024-10-05 08:37:07,225 | INFO     | collected zombie processes
[2024-10-05 11:14:08] 2024-10-05 08:37:07,225 | INFO     | will  attempt to kill all subprocesses of pid=13168
[2024-10-05 11:14:08] 2024-10-05 08:37:07,917 | INFO     | process IDs to be killed: [13168] (in reverse order)
[2024-10-05 11:14:08] 2024-10-05 08:37:08,417 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 11:14:08] 2024-10-05 08:37:08,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 11:14:08] 2024-10-05 08:37:08,422 | INFO     | did not find any defunct processes belonging to 13168
[2024-10-05 11:14:08] 2024-10-05 08:37:08,427 | INFO     | did not find any defunct processes belonging to 13168
[2024-10-05 11:14:08] 2024-10-05 08:37:08,428 | INFO     | ready for new job
[2024-10-05 11:14:08] 2024-10-05 08:37:08,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 11:14:08] 2024-10-05 08:37:08,430 | INFO     | *************************************
[2024-10-05 11:14:08] 2024-10-05 08:37:08,431 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 11:14:08] 2024-10-05 08:37:08,431 | INFO     | *************************************
[2024-10-05 11:14:08] 2024-10-05 08:37:08,431 | INFO     | 
[2024-10-05 11:14:08] 2024-10-05 08:37:08,431 | INFO     | pilot is running in a VM
[2024-10-05 11:14:08] 2024-10-05 08:37:08,432 | INFO     | architecture information:
[2024-10-05 11:14:08] 2024-10-05 08:37:08,439 | INFO     | executing command: cat /etc/os-release
[2024-10-05 11:14:08] 2024-10-05 08:37:08,537 | INFO     | cat /etc/os-release:
[2024-10-05 11:14:08] NAME="CentOS Linux"
[2024-10-05 11:14:08] VERSION="7 (Core)"
[2024-10-05 11:14:08] ID="centos"
[2024-10-05 11:14:08] ID_LIKE="rhel fedora"
[2024-10-05 11:14:08] VERSION_ID="7"
[2024-10-05 11:14:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 11:14:08] ANSI_COLOR="0;31"
[2024-10-05 11:14:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 11:14:08] HOME_URL="https://www.centos.org/"
[2024-10-05 11:14:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 11:14:08] 
[2024-10-05 11:14:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 11:14:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 11:14:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 11:14:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 11:14:08] 
[2024-10-05 11:14:08] 2024-10-05 08:37:08,538 | INFO     | *************************************
[2024-10-05 11:14:08] 2024-10-05 08:37:09,042 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2024-10-05 11:14:08] 2024-10-05 08:37:09,322 | INFO     | sufficient remaining disk space (487146389504 B)
[2024-10-05 11:14:08] 2024-10-05 08:37:09,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 11:14:08] 2024-10-05 08:37:09,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 11:14:08] 2024-10-05 08:37:09,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 11:14:08] 2024-10-05 08:37:09,524 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-05 11:14:08] 2024-10-05 08:37:09,524 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-05 11:14:08] 2024-10-05 08:37:09,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 11:14:08] 2024-10-05 08:37:09,524 | INFO     | will abort loop
[2024-10-05 11:14:08] 2024-10-05 08:37:09,587 | INFO     | all payload control threads have been joined
[2024-10-05 11:14:08] 2024-10-05 08:37:10,148 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 11:14:08] 2024-10-05 08:37:10,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 11:14:08] 2024-10-05 08:37:10,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 11:14:08] 2024-10-05 08:37:10,214 | INFO     | all job control threads have been joined
[2024-10-05 11:14:08] 2024-10-05 08:37:10,328 | INFO     | [job] retrieve thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:10,341 | INFO     | all data control threads have been joined
[2024-10-05 11:14:08] 2024-10-05 08:37:10,396 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:10,423 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:10,530 | INFO     | [job] job monitor thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:10,593 | INFO     | [payload] control thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:10,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 11:14:08] 2024-10-05 08:37:10,737 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:10,749 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:10,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 11:14:08] 2024-10-05 08:37:11,066 | INFO     | [data] copytool_in thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:11,220 | INFO     | [job] control thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:11,346 | INFO     | [payload] failed_post thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:11,347 | INFO     | [data] control thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:11,508 | INFO     | [job] validate thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:11,830 | INFO     | [job] queue monitor thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:11,923 | INFO     | [payload] validate_post thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:12,712 | INFO     | [data] copytool_out thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:13,402 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 11:14:08] 2024-10-05 08:37:15,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814268426048)>', '<ExcThread(monitor, started 139813600622336)>']
[2024-10-05 11:14:08] 2024-10-05 08:37:16,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 11:14:08] 2024-10-05 08:37:16,182 | INFO     | [monitor] control thread has ended
[2024-10-05 11:14:08] 2024-10-05 08:37:20,333 | INFO     | all workflow threads have been joined
[2024-10-05 11:14:08] 2024-10-05 08:37:20,333 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 11:14:08] 2024-10-05 08:37:20,333 | INFO     | traces error code: 0
[2024-10-05 11:14:08] 2024-10-05 08:37:20,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 11:14:08] 2024-10-05 08:37:20,714 [wrapper] ==== pilot stdout END ====
[2024-10-05 11:14:08] 2024-10-05 08:37:20,820 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 11:14:08] 2024-10-05 08:37:20,940 [wrapper] pilotpid: 1440
[2024-10-05 11:14:08] 2024-10-05 08:37:21,038 [wrapper] Pilot exit status: 0
[2024-10-05 11:14:08] 2024-10-05 08:37:21,320 [wrapper] pandaids: 6355404966
[2024-10-05 11:14:08] 2024-10-05 08:37:21,831 [wrapper] cleanup supervisor_pilot 16260 1441
[2024-10-05 11:14:08] 2024-10-05 08:37:21,862 [wrapper] Test setup, not cleaning
[2024-10-05 11:14:08] 2024-10-05 08:37:21,875 [wrapper] ==== wrapper stdout END ====
[2024-10-05 11:14:08] 2024-10-05 08:37:21,883 [wrapper] ==== wrapper stderr END ====
[2024-10-05 11:14:08] 2024-10-05 08:37:21,900 [wrapper] apfmon messages muted
[2024-10-05 11:14:08]  *** Error codes and diagnostics ***
[2024-10-05 11:14:08]     "exeErrorCode": 0,
[2024-10-05 11:14:08]     "exeErrorDiag": "",
[2024-10-05 11:14:08]     "pilotErrorCode": 0,
[2024-10-05 11:14:08]     "pilotErrorDiag": "",
[2024-10-05 11:14:08]  *** Listing of results directory ***
[2024-10-05 11:14:08] total 808488
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc      5653 Oct  3 20:37 queuedata.json
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc    484599 Oct  3 20:37 pilot3.tar.gz
[2024-10-05 11:14:08] -rwx------. 1 boinc boinc     33814 Oct  3 20:38 runpilot2-wrapper.sh
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc       100 Oct  5 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 11:14:08] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 03:32 run_atlas
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc       105 Oct  5 03:32 job.xml
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc      6345 Oct  5 03:32 init_data.xml
[2024-10-05 11:14:08] -rw-r--r--. 2 boinc boinc 588796905 Oct  5 03:32 EVNT.41481137._000032.pool.root.1
[2024-10-05 11:14:08] -rw-r--r--. 2 boinc boinc     17537 Oct  5 03:32 start_atlas.sh
[2024-10-05 11:14:08] drwxrwx--x. 2 boinc boinc        68 Oct  5 03:32 shared
[2024-10-05 11:14:08] -rw-r--r--. 2 boinc boinc    498160 Oct  5 03:32 input.tar.gz
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc         0 Oct  5 03:32 boinc_lockfile
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc      2534 Oct  5 03:52 pandaJob.out
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc       424 Oct  5 03:52 setup.sh.local
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc   1024498 Oct  5 03:55 agis_schedconf.cvmfs.json
[2024-10-05 11:14:08] drwx------. 4 boinc boinc      4096 Oct  5 03:55 pilot3
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc 229644930 Oct  5 10:34 HITS.41481139._003043.pool.root.1
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc       532 Oct  5 10:34 boinc_task_state.xml
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc      1018 Oct  5 10:35 memory_monitor_summary.json
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc   1615815 Oct  5 10:35 agis_ddmendpoints.agis.ALL.json
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc    509746 Oct  5 10:35 log.41481139._003043.job.log.tgz.1
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc        95 Oct  5 10:36 pilot_heartbeat.json
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc      7692 Oct  5 10:37 heartbeat.json
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc      4460 Oct  5 10:37 pilotlog.txt
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc   2284029 Oct  5 10:37 log.41481139._003043.job.log.1
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc       357 Oct  5 10:37 output.list
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc       620 Oct  5 10:37 runtime_log
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc   2816000 Oct  5 10:37 result.tar.gz
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc     10999 Oct  5 10:37 runtime_log.err
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc       646 Oct  5 10:37 2EwLDmbtfG6n9Rq4apOajLDm4fhM0noT9bVorHsSDmvpcKDm8VStUn.diag
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc      8192 Oct  5 11:14 boinc_mmap_file
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc        28 Oct  5 11:14 wrapper_checkpoint.txt
[2024-10-05 11:14:08] -rw-r--r--. 1 boinc boinc     21591 Oct  5 11:14 stderr.txt
[2024-10-05 11:14:08] HITS file was successfully produced:
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc 229644930 Oct  5 10:34 shared/HITS.pool.root.1
[2024-10-05 11:14:08]  *** Contents of shared directory: ***
[2024-10-05 11:14:08] total 802524
[2024-10-05 11:14:08] -rw-r--r--. 2 boinc boinc 588796905 Oct  5 03:32 ATLAS.root_0
[2024-10-05 11:14:08] -rw-r--r--. 2 boinc boinc     17537 Oct  5 03:32 start_atlas.sh
[2024-10-05 11:14:08] -rw-r--r--. 2 boinc boinc    498160 Oct  5 03:32 input.tar.gz
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc 229644930 Oct  5 10:34 HITS.pool.root.1
[2024-10-05 11:14:08] -rw-------. 1 boinc boinc   2816000 Oct  5 10:37 result.tar.gz
11:14:10 (16387): run_atlas exited; CPU time 87278.401028
11:14:10 (16387): called boinc_finish(0)

</stderr_txt>
]]>

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