Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:07:13 (32093): wrapper (7.7.26015): starting
11:07:13 (32093): wrapper: running run_atlas (--nthreads 8)
[2024-10-05 11:07:13] Arguments: --nthreads 8
[2024-10-05 11:07:13] Threads: 8
[2024-10-05 11:07:13] Checking for CVMFS
[2024-10-05 11:07:14] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-05 11:07:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-05 11:07:14] Running cvmfs_config stat atlas.cern.ch
[2024-10-05 11:07:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-05 11:07:15] 2.11.2.0 12639 56938 73040 137998 0 16 13635707 25165825 4465 130560 0 38415319 99.939 21460267 8947 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-05 11:07:15] CVMFS is ok
[2024-10-05 11:07:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-05 11:07:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-05 11:07:15] Further information can be found at the LHC@home message board.
[2024-10-05 11:07:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-05 11:07:15] Checking for apptainer binary...
[2024-10-05 11:07:15] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-05 11:07:15] Running /usr/bin/apptainer --version
[2024-10-05 11:07:15] apptainer version 1.3.2-1.el7
[2024-10-05 11:07:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-05 12:29:10] cg-vwn379.simple-grid.lan
[2024-10-05 12:29:10] apptainer works
[2024-10-05 12:29:10] Set ATHENA_PROC_NUMBER=8
[2024-10-05 12:29:10] Set ATHENA_CORE_NUMBER=8
[2024-10-05 12:29:10] Starting ATLAS job with PandaID=6355370573
[2024-10-05 12:29:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 19:30:33]  *** The last 200 lines of the pilot log: ***
[2024-10-05 19:30:33] 2024-10-05 16:47:34,445 | INFO     | chi2: 5.214167647226513
[2024-10-05 19:30:33] 2024-10-05 16:47:34,445 | INFO     | model: linear, x: [1728124222.0, 1728124283.0, 1728124344.0, 1728124405.0, 1728124466.0, 1728124527.0, 1728124588.0, 1728124649.0, 1728124710.0, 1728124771.0, 1728
[2024-10-05 19:30:33] 2024-10-05 16:47:34,446 | INFO     | sum of square deviations: 15078347830.0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,450 | INFO     | sum of deviations: 137402906565.00002
[2024-10-05 19:30:33] 2024-10-05 16:47:34,450 | INFO     | mean x: 1728135324.0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,450 | INFO     | mean y: 2506278.3671232876
[2024-10-05 19:30:33] 2024-10-05 16:47:34,450 | INFO     | -- intersect: -15745294417.86128
[2024-10-05 19:30:33] 2024-10-05 16:47:34,450 | INFO     | intersect: -15745294417.86128
[2024-10-05 19:30:33] 2024-10-05 16:47:34,451 | INFO     | chi2: 4.46247603073596
[2024-10-05 19:30:33] 2024-10-05 16:47:34,451 | INFO     | current chi2=4.46247603073596 (change=14.41633003285554 %)
[2024-10-05 19:30:33] 2024-10-05 16:47:34,451 | INFO     | right removable region: 364
[2024-10-05 19:30:33] 2024-10-05 16:47:34,452 | INFO     | model: linear, x: [1728124527.0, 1728124588.0, 1728124649.0, 1728124710.0, 1728124771.0, 1728124832.0, 1728124893.0, 1728124954.0, 1728125015.0, 1728125076.0, 1728
[2024-10-05 19:30:33] 2024-10-05 16:47:34,452 | INFO     | sum of square deviations: 15078347830.0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,461 | INFO     | sum of deviations: 18839942720.000015
[2024-10-05 19:30:33] 2024-10-05 16:47:34,462 | INFO     | mean x: 1728135629.0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,462 | INFO     | mean y: 2523845.397260274
[2024-10-05 19:30:33] 2024-10-05 16:47:34,462 | INFO     | -- intersect: -2156729716.7187157
[2024-10-05 19:30:33] 2024-10-05 16:47:34,462 | INFO     | intersect: -2156729716.7187157
[2024-10-05 19:30:33] 2024-10-05 16:47:34,462 | INFO     | chi2: 2.6217710989708056
[2024-10-05 19:30:33] 2024-10-05 16:47:34,463 | INFO     | current chi2=2.6217710989708056 (change=49.718319847936584 %)
[2024-10-05 19:30:33] 2024-10-05 16:47:34,463 | INFO     | model: linear, x: [1728124832.0, 1728124893.0, 1728124954.0, 1728125015.0, 1728125076.0, 1728125137.0, 1728125198.0, 1728125259.0, 1728125320.0, 1728125381.0, 1728
[2024-10-05 19:30:33] 2024-10-05 16:47:34,463 | INFO     | sum of square deviations: 14467136370.0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,468 | INFO     | sum of deviations: -50986326284.5
[2024-10-05 19:30:33] 2024-10-05 16:47:34,468 | INFO     | mean x: 1728135781.5
[2024-10-05 19:30:33] 2024-10-05 16:47:34,468 | INFO     | mean y: 2541267.191666667
[2024-10-05 19:30:33] 2024-10-05 16:47:34,468 | INFO     | -- intersect: 6092986021.842057
[2024-10-05 19:30:33] 2024-10-05 16:47:34,468 | INFO     | intersect: 6092986021.842057
[2024-10-05 19:30:33] 2024-10-05 16:47:34,469 | INFO     | chi2: 1.3242716379601136
[2024-10-05 19:30:33] 2024-10-05 16:47:34,469 | INFO     | current chi2=1.3242716379601136 (change=49.489425736672224 %)
[2024-10-05 19:30:33] 2024-10-05 16:47:34,469 | INFO     | model: linear, x: [1728125137.0, 1728125198.0, 1728125259.0, 1728125320.0, 1728125381.0, 1728125442.0, 1728125503.0, 1728125564.0, 1728125625.0, 1728125686.0, 1728
[2024-10-05 19:30:33] 2024-10-05 16:47:34,470 | INFO     | sum of square deviations: 13872669410.0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,474 | INFO     | sum of deviations: -77873602778.99998
[2024-10-05 19:30:33] 2024-10-05 16:47:34,474 | INFO     | mean x: 1728135934.0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,474 | INFO     | mean y: 2548122.867605634
[2024-10-05 19:30:33] 2024-10-05 16:47:34,474 | INFO     | -- intersect: 9703361087.921326
[2024-10-05 19:30:33] 2024-10-05 16:47:34,474 | INFO     | intersect: 9703361087.921326
[2024-10-05 19:30:33] 2024-10-05 16:47:34,475 | INFO     | chi2: 0.9806771831688267
[2024-10-05 19:30:33] 2024-10-05 16:47:34,475 | INFO     | current chi2=0.9806771831688267 (change=25.945919624205967 %)
[2024-10-05 19:30:33] 2024-10-05 16:47:34,475 | INFO     | model: linear, x: [1728125442.0, 1728125503.0, 1728125564.0, 1728125625.0, 1728125686.0, 1728125747.0, 1728125808.0, 1728125869.0, 1728125930.0, 1728125991.0, 1728
[2024-10-05 19:30:33] 2024-10-05 16:47:34,476 | INFO     | sum of square deviations: 13294714387.5
[2024-10-05 19:30:33] 2024-10-05 16:47:34,479 | INFO     | sum of deviations: -71851023216.5
[2024-10-05 19:30:33] 2024-10-05 16:47:34,479 | INFO     | mean x: 1728136086.5
[2024-10-05 19:30:33] 2024-10-05 16:47:34,480 | INFO     | mean y: 2546523.431428571
[2024-10-05 19:30:33] 2024-10-05 16:47:34,484 | INFO     | -- intersect: 9342224116.590475
[2024-10-05 19:30:33] 2024-10-05 16:47:34,484 | INFO     | intersect: 9342224116.590475
[2024-10-05 19:30:33] 2024-10-05 16:47:34,485 | INFO     | chi2: 0.9672216018172985
[2024-10-05 19:30:33] 2024-10-05 16:47:34,485 | INFO     | current chi2=0.9672216018172985 (change=1.3720704001748671 %)
[2024-10-05 19:30:33] 2024-10-05 16:47:34,485 | INFO     | left removable region: 40
[2024-10-05 19:30:33] 2024-10-05 16:47:34,486 | INFO     | model: linear, x: [1728126662.0, 1728126723.0, 1728126784.0, 1728126845.0, 1728126906.0, 1728126967.0, 1728127028.0, 1728127089.0, 1728127150.0, 1728127211.0, 1728
[2024-10-05 19:30:33] 2024-10-05 16:47:34,486 | INFO     | sum of square deviations: 10546523325.0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,489 | INFO     | sum of deviations: -2792531291.5
[2024-10-05 19:30:33] 2024-10-05 16:47:34,489 | INFO     | mean x: 1728136513.5
[2024-10-05 19:30:33] 2024-10-05 16:47:34,490 | INFO     | mean y: 2539936.8302469137
[2024-10-05 19:30:33] 2024-10-05 16:47:34,490 | INFO     | -- intersect: 460119666.3030836
[2024-10-05 19:30:33] 2024-10-05 16:47:34,490 | INFO     | intersect: 460119666.3030836
[2024-10-05 19:30:33] 2024-10-05 16:47:34,490 | INFO     | chi2: 0.06659055098017476
[2024-10-05 19:30:33] 2024-10-05 16:47:34,491 | INFO     | -- intersect: 460119666.3030836
[2024-10-05 19:30:33] 2024-10-05 16:47:34,491 | INFO     | current memory leak: -0.26 B/s (using 324 data points, chi2=0.07)
[2024-10-05 19:30:33] 2024-10-05 16:47:34,492 | INFO     | ..............................
[2024-10-05 19:30:33] 2024-10-05 16:47:34,492 | INFO     | . Timing measurements:
[2024-10-05 19:30:33] 2024-10-05 16:47:34,492 | INFO     | . get job = 0 s
[2024-10-05 19:30:33] 2024-10-05 16:47:34,492 | INFO     | . initial setup = 2 s
[2024-10-05 19:30:33] 2024-10-05 16:47:34,492 | INFO     | . payload setup = 9 s
[2024-10-05 19:30:33] 2024-10-05 16:47:34,492 | INFO     | . stage-in = 0 s
[2024-10-05 19:30:33] 2024-10-05 16:47:34,492 | INFO     | . payload execution = 22558 s
[2024-10-05 19:30:33] 2024-10-05 16:47:34,492 | INFO     | . stage-out = 4 s
[2024-10-05 19:30:33] 2024-10-05 16:47:34,493 | INFO     | . log creation = 2 s
[2024-10-05 19:30:33] 2024-10-05 16:47:34,493 | INFO     | ..............................
[2024-10-05 19:30:33] 2024-10-05 16:47:34,640 | INFO     | 
[2024-10-05 19:30:33] 2024-10-05 16:47:34,641 | INFO     | job summary report
[2024-10-05 19:30:33] 2024-10-05 16:47:34,641 | INFO     | --------------------------------------------------
[2024-10-05 19:30:33] 2024-10-05 16:47:34,641 | INFO     | PanDA job id: 6355370573
[2024-10-05 19:30:33] 2024-10-05 16:47:34,641 | INFO     | task id: 41481139
[2024-10-05 19:30:33] 2024-10-05 16:47:34,641 | INFO     | errors: (none)
[2024-10-05 19:30:33] 2024-10-05 16:47:34,641 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 19:30:33] 2024-10-05 16:47:34,641 | INFO     | pilot state: finished 
[2024-10-05 19:30:33] 2024-10-05 16:47:34,641 | INFO     | transexitcode: 0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | exeerrorcode: 0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | exeerrordiag: 
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | exitcode: 0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | exitmsg: OK
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | cpuconsumptiontime: 84752 s
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | nevents: 400
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | neventsw: 0
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | pid: 10373
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | pgrp: 10373
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | corecount: 8
[2024-10-05 19:30:33] 2024-10-05 16:47:34,642 | INFO     | event service: False
[2024-10-05 19:30:33] 2024-10-05 16:47:34,643 | INFO     | sizes: {0: 2435312, 1: 2435511, 10: 2435717, 12: 2435745, 22572: 2469899, 22577: 2479107, 22661: 2479221}
[2024-10-05 19:30:33] 2024-10-05 16:47:34,643 | INFO     | --------------------------------------------------
[2024-10-05 19:30:33] 2024-10-05 16:47:34,643 | INFO     | 
[2024-10-05 19:30:33] 2024-10-05 16:47:34,643 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-10-05 19:30:33] 2024-10-05 16:47:35,027 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 19:30:33] 2024-10-05 16:47:35,029 | INFO     | job 6355370573 has completed (purged errors)
[2024-10-05 19:30:33] 2024-10-05 16:47:35,030 | INFO     | overall cleanup function is called
[2024-10-05 19:30:33] 2024-10-05 16:47:36,039 | INFO     | --- collectZombieJob: --- 10, [10373]
[2024-10-05 19:30:33] 2024-10-05 16:47:36,039 | INFO     | zombie collector waiting for pid 10373
[2024-10-05 19:30:33] 2024-10-05 16:47:36,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 19:30:33] 2024-10-05 16:47:36,039 | INFO     | collected zombie processes
[2024-10-05 19:30:33] 2024-10-05 16:47:36,040 | INFO     | will  attempt to kill all subprocesses of pid=10373
[2024-10-05 19:30:33] 2024-10-05 16:47:36,890 | INFO     | process IDs to be killed: [10373] (in reverse order)
[2024-10-05 19:30:33] 2024-10-05 16:47:36,949 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 19:30:33] 2024-10-05 16:47:36,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 19:30:33] 2024-10-05 16:47:36,953 | INFO     | did not find any defunct processes belonging to 10373
[2024-10-05 19:30:33] 2024-10-05 16:47:36,956 | INFO     | did not find any defunct processes belonging to 10373
[2024-10-05 19:30:33] 2024-10-05 16:47:36,957 | INFO     | ready for new job
[2024-10-05 19:30:33] 2024-10-05 16:47:36,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 19:30:33] 2024-10-05 16:47:36,959 | INFO     | *************************************
[2024-10-05 19:30:33] 2024-10-05 16:47:36,960 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 19:30:33] 2024-10-05 16:47:36,960 | INFO     | *************************************
[2024-10-05 19:30:33] 2024-10-05 16:47:36,960 | INFO     | 
[2024-10-05 19:30:33] 2024-10-05 16:47:36,961 | INFO     | pilot is running in a VM
[2024-10-05 19:30:33] 2024-10-05 16:47:36,961 | INFO     | architecture information:
[2024-10-05 19:30:33] 2024-10-05 16:47:36,962 | INFO     | executing command: cat /etc/os-release
[2024-10-05 19:30:33] 2024-10-05 16:47:37,135 | INFO     | cat /etc/os-release:
[2024-10-05 19:30:33] NAME="CentOS Linux"
[2024-10-05 19:30:33] VERSION="7 (Core)"
[2024-10-05 19:30:33] ID="centos"
[2024-10-05 19:30:33] ID_LIKE="rhel fedora"
[2024-10-05 19:30:33] VERSION_ID="7"
[2024-10-05 19:30:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 19:30:33] ANSI_COLOR="0;31"
[2024-10-05 19:30:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 19:30:33] HOME_URL="https://www.centos.org/"
[2024-10-05 19:30:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 19:30:33] 
[2024-10-05 19:30:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 19:30:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 19:30:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 19:30:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 19:30:33] 
[2024-10-05 19:30:33] 2024-10-05 16:47:37,136 | INFO     | *************************************
[2024-10-05 19:30:33] 2024-10-05 16:47:37,639 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-10-05 19:30:33] 2024-10-05 16:47:37,901 | INFO     | sufficient remaining disk space (489585377280 B)
[2024-10-05 19:30:33] 2024-10-05 16:47:37,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 19:30:33] 2024-10-05 16:47:37,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 19:30:33] 2024-10-05 16:47:37,904 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-05 19:30:33] 2024-10-05 16:47:37,904 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 19:30:33] 2024-10-05 16:47:37,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 19:30:33] 2024-10-05 16:47:37,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 19:30:33] 2024-10-05 16:47:37,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 19:30:33] 2024-10-05 16:47:38,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 19:30:33] 2024-10-05 16:47:38,051 | INFO     | aborting loop
[2024-10-05 19:30:33] 2024-10-05 16:47:38,173 | INFO     | all payload control threads have been joined
[2024-10-05 19:30:33] 2024-10-05 16:47:38,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 19:30:33] 2024-10-05 16:47:38,864 | INFO     | all data control threads have been joined
[2024-10-05 19:30:33] 2024-10-05 16:47:38,907 | INFO     | [job] retrieve thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,034 | INFO     | [data] copytool_in thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,057 | INFO     | [job] job monitor thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,093 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,179 | INFO     | [payload] control thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,364 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,486 | INFO     | all job control threads have been joined
[2024-10-05 19:30:33] 2024-10-05 16:47:39,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 19:30:33] 2024-10-05 16:47:39,691 | INFO     | [job] validate thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,716 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,829 | INFO     | [payload] failed_post thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,870 | INFO     | [data] control thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,892 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:39,936 | INFO     | [payload] validate_post thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:40,492 | INFO     | [job] control thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:40,567 | INFO     | [data] copytool_out thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:40,661 | INFO     | [job] queue monitor thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:41,918 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 19:30:33] 2024-10-05 16:47:42,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713386780480)>', '<ExcThread(monitor, started 139713088296704)>']
[2024-10-05 19:30:33] 2024-10-05 16:47:42,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 19:30:33] 2024-10-05 16:47:42,935 | INFO     | [monitor] control thread has ended
[2024-10-05 19:30:33] 2024-10-05 16:47:47,919 | INFO     | all workflow threads have been joined
[2024-10-05 19:30:33] 2024-10-05 16:47:47,919 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 19:30:33] 2024-10-05 16:47:47,920 | INFO     | traces error code: 0
[2024-10-05 19:30:33] 2024-10-05 16:47:47,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 19:30:33] 2024-10-05 16:47:48,208 [wrapper] ==== pilot stdout END ====
[2024-10-05 19:30:33] 2024-10-05 16:47:48,323 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 19:30:33] 2024-10-05 16:47:48,450 [wrapper] pilotpid: 1471
[2024-10-05 19:30:33] 2024-10-05 16:47:48,546 [wrapper] Pilot exit status: 0
[2024-10-05 19:30:33] 2024-10-05 16:47:48,894 [wrapper] pandaids: 6355370573
[2024-10-05 19:30:33] 2024-10-05 16:47:49,017 [wrapper] cleanup supervisor_pilot 22354 1472
[2024-10-05 19:30:33] 2024-10-05 16:47:49,151 [wrapper] Test setup, not cleaning
[2024-10-05 19:30:33] 2024-10-05 16:47:49,225 [wrapper] ==== wrapper stdout END ====
[2024-10-05 19:30:33] 2024-10-05 16:47:49,305 [wrapper] ==== wrapper stderr END ====
[2024-10-05 19:30:33] 2024-10-05 16:47:49,476 [wrapper] apfmon messages muted
[2024-10-05 19:30:33]  *** Error codes and diagnostics ***
[2024-10-05 19:30:33]     "exeErrorCode": 0,
[2024-10-05 19:30:33]     "exeErrorDiag": "",
[2024-10-05 19:30:33]     "pilotErrorCode": 0,
[2024-10-05 19:30:33]     "pilotErrorDiag": "",
[2024-10-05 19:30:33]  *** Listing of results directory ***
[2024-10-05 19:30:33] total 800796
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc    484599 Oct  3 20:05 pilot3.tar.gz
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc      5653 Oct  3 20:12 queuedata.json
[2024-10-05 19:30:33] -rwx------. 1 boinc boinc     33814 Oct  3 20:13 runpilot2-wrapper.sh
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc       100 Oct  5 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 19:30:33] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 11:07 run_atlas
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc       105 Oct  5 11:07 job.xml
[2024-10-05 19:30:33] -rw-r--r--. 2 boinc boinc 586789182 Oct  5 11:07 EVNT.41481137._000020.pool.root.1
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc      6347 Oct  5 11:07 init_data.xml
[2024-10-05 19:30:33] -rw-r--r--. 2 boinc boinc     17537 Oct  5 11:07 start_atlas.sh
[2024-10-05 19:30:33] drwxrwx--x. 2 boinc boinc        68 Oct  5 11:07 shared
[2024-10-05 19:30:33] -rw-r--r--. 2 boinc boinc    498172 Oct  5 11:07 input.tar.gz
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc         0 Oct  5 11:07 boinc_lockfile
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc      2532 Oct  5 12:29 pandaJob.out
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc       424 Oct  5 12:29 setup.sh.local
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc   1024464 Oct  5 12:29 agis_schedconf.cvmfs.json
[2024-10-05 19:30:33] drwx------. 4 boinc boinc      4096 Oct  5 12:29 pilot3
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc 224308689 Oct  5 18:44 HITS.41481139._002884.pool.root.1
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc       532 Oct  5 18:45 boinc_task_state.xml
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc      1015 Oct  5 18:46 memory_monitor_summary.json
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc   1615815 Oct  5 18:46 agis_ddmendpoints.agis.ALL.json
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc    490022 Oct  5 18:46 log.41481139._002884.job.log.tgz.1
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc        95 Oct  5 18:47 pilot_heartbeat.json
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc      7683 Oct  5 18:47 heartbeat.json
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc      4397 Oct  5 18:47 pilotlog.txt
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc   2036943 Oct  5 18:47 log.41481139._002884.job.log.1
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc       357 Oct  5 18:47 output.list
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc       620 Oct  5 18:47 runtime_log
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc   2549760 Oct  5 18:47 result.tar.gz
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc       646 Oct  5 18:47 sHkMDmRVfG6n9Rq4apOajLDm4fhM0noT9bVorHsSDmZpcKDmKhb5Dn.diag
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc     10999 Oct  5 18:47 runtime_log.err
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc      8192 Oct  5 19:30 boinc_mmap_file
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc        28 Oct  5 19:30 wrapper_checkpoint.txt
[2024-10-05 19:30:33] -rw-r--r--. 1 boinc boinc     21508 Oct  5 19:30 stderr.txt
[2024-10-05 19:30:33] HITS file was successfully produced:
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc 224308689 Oct  5 18:44 shared/HITS.pool.root.1
[2024-10-05 19:30:33]  *** Contents of shared directory: ***
[2024-10-05 19:30:33] total 795092
[2024-10-05 19:30:33] -rw-r--r--. 2 boinc boinc 586789182 Oct  5 11:07 ATLAS.root_0
[2024-10-05 19:30:33] -rw-r--r--. 2 boinc boinc     17537 Oct  5 11:07 start_atlas.sh
[2024-10-05 19:30:33] -rw-r--r--. 2 boinc boinc    498172 Oct  5 11:07 input.tar.gz
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc 224308689 Oct  5 18:44 HITS.pool.root.1
[2024-10-05 19:30:33] -rw-------. 1 boinc boinc   2549760 Oct  5 18:47 result.tar.gz
19:30:35 (32093): run_atlas exited; CPU time 84675.248307
19:30:35 (32093): called boinc_finish(0)

</stderr_txt>
]]>

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