Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:49:05 (28375): wrapper (7.7.26015): starting
09:49:05 (28375): wrapper: running run_atlas (--nthreads 8)
[2024-10-05 09:49:05] Arguments: --nthreads 8
[2024-10-05 09:49:05] Threads: 8
[2024-10-05 09:49:05] Checking for CVMFS
[2024-10-05 09:49:05] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-05 09:49:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-05 09:49:05] Running cvmfs_config stat atlas.cern.ch
[2024-10-05 09:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-05 09:49:06] 2.11.2.0 25732 56857 86392 137997 2 100 25030413 25165825 4221 130560 0 39224106 99.930 20839296 6911 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-05 09:49:06] CVMFS is ok
[2024-10-05 09:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-05 09:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-05 09:49:06] Further information can be found at the LHC@home message board.
[2024-10-05 09:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-05 09:49:06] Checking for apptainer binary...
[2024-10-05 09:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-05 09:49:06] Running /usr/bin/apptainer --version
[2024-10-05 09:49:06] apptainer version 1.3.2-1.el7
[2024-10-05 09:49:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-05 09:49:08] cg-vwn345.simple-grid.lan
[2024-10-05 09:49:08] apptainer works
[2024-10-05 09:49:08] Set ATHENA_PROC_NUMBER=8
[2024-10-05 09:49:08] Set ATHENA_CORE_NUMBER=8
[2024-10-05 09:49:08] Starting ATLAS job with PandaID=6355216566
[2024-10-05 09:49:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 16:11:09]  *** The last 200 lines of the pilot log: ***
[2024-10-05 16:11:09] 2024-10-05 14:09:22,353 | INFO     | model: linear, x: [1728114766.0, 1728114827.0, 1728114888.0, 1728114949.0, 1728115010.0, 1728115071.0, 1728115132.0, 1728115193.0, 1728115254.0, 1728115315.0, 1728
[2024-10-05 16:11:09] 2024-10-05 14:09:22,354 | INFO     | sum of square deviations: 14954754815.0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,358 | INFO     | sum of deviations: 220386555685.49997
[2024-10-05 16:11:09] 2024-10-05 14:09:22,358 | INFO     | mean x: 1728125837.5
[2024-10-05 16:11:09] 2024-10-05 14:09:22,358 | INFO     | mean y: 2495731.909340659
[2024-10-05 16:11:09] 2024-10-05 14:09:22,358 | INFO     | -- intersect: -25464702214.77562
[2024-10-05 16:11:09] 2024-10-05 14:09:22,358 | INFO     | intersect: -25464702214.77562
[2024-10-05 16:11:09] 2024-10-05 14:09:22,359 | INFO     | chi2: 4.251691156940032
[2024-10-05 16:11:09] 2024-10-05 14:09:22,359 | INFO     | current chi2=4.251691156940032 (change=15.477330869445026 %)
[2024-10-05 16:11:09] 2024-10-05 14:09:22,359 | INFO     | right removable region: 363
[2024-10-05 16:11:09] 2024-10-05 14:09:22,360 | INFO     | model: linear, x: [1728115071.0, 1728115132.0, 1728115193.0, 1728115254.0, 1728115315.0, 1728115376.0, 1728115437.0, 1728115498.0, 1728115559.0, 1728115620.0, 1728
[2024-10-05 16:11:09] 2024-10-05 14:09:22,360 | INFO     | sum of square deviations: 14954754815.0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,364 | INFO     | sum of deviations: 101150970643.50002
[2024-10-05 16:11:09] 2024-10-05 14:09:22,364 | INFO     | mean x: 1728126142.5
[2024-10-05 16:11:09] 2024-10-05 14:09:22,364 | INFO     | mean y: 2514048.4203296704
[2024-10-05 16:11:09] 2024-10-05 14:09:22,364 | INFO     | -- intersect: -11686185557.202888
[2024-10-05 16:11:09] 2024-10-05 14:09:22,364 | INFO     | intersect: -11686185557.202888
[2024-10-05 16:11:09] 2024-10-05 14:09:22,365 | INFO     | chi2: 2.381998648477133
[2024-10-05 16:11:09] 2024-10-05 14:09:22,365 | INFO     | current chi2=2.381998648477133 (change=52.646399702380464 %)
[2024-10-05 16:11:09] 2024-10-05 14:09:22,366 | INFO     | model: linear, x: [1728115376.0, 1728115437.0, 1728115498.0, 1728115559.0, 1728115620.0, 1728115681.0, 1728115742.0, 1728115803.0, 1728115864.0, 1728115925.0, 1728
[2024-10-05 16:11:09] 2024-10-05 14:09:22,366 | INFO     | sum of square deviations: 14346910860.0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,370 | INFO     | sum of deviations: 31785038688.00001
[2024-10-05 16:11:09] 2024-10-05 14:09:22,370 | INFO     | mean x: 1728126295.0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,370 | INFO     | mean y: 2531451.5515320334
[2024-10-05 16:11:09] 2024-10-05 14:09:22,370 | INFO     | -- intersect: -3826067030.7509584
[2024-10-05 16:11:09] 2024-10-05 14:09:22,371 | INFO     | intersect: -3826067030.7509584
[2024-10-05 16:11:09] 2024-10-05 14:09:22,371 | INFO     | chi2: 1.161622147880033
[2024-10-05 16:11:09] 2024-10-05 14:09:22,371 | INFO     | current chi2=1.161622147880033 (change=51.233299455367664 %)
[2024-10-05 16:11:09] 2024-10-05 14:09:22,372 | INFO     | model: linear, x: [1728115681.0, 1728115742.0, 1728115803.0, 1728115864.0, 1728115925.0, 1728115986.0, 1728116047.0, 1728116108.0, 1728116169.0, 1728116230.0, 1728
[2024-10-05 16:11:09] 2024-10-05 14:09:22,372 | INFO     | sum of square deviations: 13755764892.5
[2024-10-05 16:11:09] 2024-10-05 14:09:22,376 | INFO     | sum of deviations: 4015514862.499996
[2024-10-05 16:11:09] 2024-10-05 14:09:22,376 | INFO     | mean x: 1728126447.5
[2024-10-05 16:11:09] 2024-10-05 14:09:22,376 | INFO     | mean y: 2538574.7994350283
[2024-10-05 16:11:09] 2024-10-05 14:09:22,376 | INFO     | -- intersect: -501927551.8351562
[2024-10-05 16:11:09] 2024-10-05 14:09:22,376 | INFO     | intersect: -501927551.8351562
[2024-10-05 16:11:09] 2024-10-05 14:09:22,377 | INFO     | chi2: 0.8486297356017061
[2024-10-05 16:11:09] 2024-10-05 14:09:22,377 | INFO     | current chi2=0.8486297356017061 (change=26.944425332242496 %)
[2024-10-05 16:11:09] 2024-10-05 14:09:22,378 | INFO     | model: linear, x: [1728115986.0, 1728116047.0, 1728116108.0, 1728116169.0, 1728116230.0, 1728116291.0, 1728116352.0, 1728116413.0, 1728116474.0, 1728116535.0, 1728
[2024-10-05 16:11:09] 2024-10-05 14:09:22,378 | INFO     | sum of square deviations: 13181084350.0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,381 | INFO     | sum of deviations: 3973892823.999996
[2024-10-05 16:11:09] 2024-10-05 14:09:22,382 | INFO     | mean x: 1728126600.0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,382 | INFO     | mean y: 2538571.6103151864
[2024-10-05 16:11:09] 2024-10-05 14:09:22,382 | INFO     | -- intersect: -518464838.45461714
[2024-10-05 16:11:09] 2024-10-05 14:09:22,382 | INFO     | intersect: -518464838.45461714
[2024-10-05 16:11:09] 2024-10-05 14:09:22,383 | INFO     | chi2: 0.833113023046574
[2024-10-05 16:11:09] 2024-10-05 14:09:22,383 | INFO     | current chi2=0.833113023046574 (change=1.8284431836612751 %)
[2024-10-05 16:11:09] 2024-10-05 14:09:22,383 | INFO     | left removable region: 40
[2024-10-05 16:11:09] 2024-10-05 14:09:22,383 | INFO     | model: linear, x: [1728117206.0, 1728117267.0, 1728117328.0, 1728117389.0, 1728117450.0, 1728117511.0, 1728117572.0, 1728117633.0, 1728117694.0, 1728117755.0, 1728
[2024-10-05 16:11:09] 2024-10-05 14:09:22,384 | INFO     | sum of square deviations: 10449170802.0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,387 | INFO     | sum of deviations: 23257928780.999996
[2024-10-05 16:11:09] 2024-10-05 14:09:22,387 | INFO     | mean x: 1728127027.0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,387 | INFO     | mean y: 2546188.464396285
[2024-10-05 16:11:09] 2024-10-05 14:09:22,387 | INFO     | -- intersect: -3843946139.0219407
[2024-10-05 16:11:09] 2024-10-05 14:09:22,387 | INFO     | intersect: -3843946139.0219407
[2024-10-05 16:11:09] 2024-10-05 14:09:22,388 | INFO     | chi2: 0.0022474993970077544
[2024-10-05 16:11:09] 2024-10-05 14:09:22,388 | INFO     | -- intersect: -3843946139.0219407
[2024-10-05 16:11:09] 2024-10-05 14:09:22,388 | INFO     | current memory leak: 2.23 B/s (using 323 data points, chi2=0.00)
[2024-10-05 16:11:09] 2024-10-05 14:09:22,389 | INFO     | ..............................
[2024-10-05 16:11:09] 2024-10-05 14:09:22,389 | INFO     | . Timing measurements:
[2024-10-05 16:11:09] 2024-10-05 14:09:22,389 | INFO     | . get job = 0 s
[2024-10-05 16:11:09] 2024-10-05 14:09:22,389 | INFO     | . initial setup = 2 s
[2024-10-05 16:11:09] 2024-10-05 14:09:22,390 | INFO     | . payload setup = 30 s
[2024-10-05 16:11:09] 2024-10-05 14:09:22,390 | INFO     | . stage-in = 0 s
[2024-10-05 16:11:09] 2024-10-05 14:09:22,390 | INFO     | . payload execution = 22595 s
[2024-10-05 16:11:09] 2024-10-05 14:09:22,390 | INFO     | . stage-out = 3 s
[2024-10-05 16:11:09] 2024-10-05 14:09:22,390 | INFO     | . log creation = 1 s
[2024-10-05 16:11:09] 2024-10-05 14:09:22,390 | INFO     | ..............................
[2024-10-05 16:11:09] 2024-10-05 14:09:22,513 | INFO     | 
[2024-10-05 16:11:09] 2024-10-05 14:09:22,513 | INFO     | job summary report
[2024-10-05 16:11:09] 2024-10-05 14:09:22,513 | INFO     | --------------------------------------------------
[2024-10-05 16:11:09] 2024-10-05 14:09:22,514 | INFO     | PanDA job id: 6355216566
[2024-10-05 16:11:09] 2024-10-05 14:09:22,514 | INFO     | task id: 41481181
[2024-10-05 16:11:09] 2024-10-05 14:09:22,514 | INFO     | errors: (none)
[2024-10-05 16:11:09] 2024-10-05 14:09:22,514 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 16:11:09] 2024-10-05 14:09:22,514 | INFO     | pilot state: finished 
[2024-10-05 16:11:09] 2024-10-05 14:09:22,514 | INFO     | transexitcode: 0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,514 | INFO     | exeerrorcode: 0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,514 | INFO     | exeerrordiag: 
[2024-10-05 16:11:09] 2024-10-05 14:09:22,514 | INFO     | exitcode: 0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | exitmsg: OK
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | cpuconsumptiontime: 83751 s
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | nevents: 400
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | neventsw: 0
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | pid: 15865
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | pgrp: 15865
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | corecount: 8
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | event service: False
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | sizes: {0: 2435264, 1: 2435463, 2: 2435463, 12: 2435491, 23: 2435519, 24: 2435753, 34: 2435909, 22630: 2469994, 22635: 2479018, 22638: 2479074, 22726: 2479244}
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | --------------------------------------------------
[2024-10-05 16:11:09] 2024-10-05 14:09:22,515 | INFO     | 
[2024-10-05 16:11:09] 2024-10-05 14:09:22,516 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-05 16:11:09] 2024-10-05 14:09:22,568 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,569 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,569 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,569 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,571 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 16:11:09] 2024-10-05 14:09:22,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,571 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 16:11:09] 2024-10-05 14:09:22,571 | INFO     | job 6355216566 has completed (purged errors)
[2024-10-05 16:11:09] 2024-10-05 14:09:22,572 | INFO     | overall cleanup function is called
[2024-10-05 16:11:09] 2024-10-05 14:09:23,582 | INFO     | --- collectZombieJob: --- 10, [15865]
[2024-10-05 16:11:09] 2024-10-05 14:09:23,582 | INFO     | zombie collector waiting for pid 15865
[2024-10-05 16:11:09] 2024-10-05 14:09:23,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 16:11:09] 2024-10-05 14:09:23,583 | INFO     | collected zombie processes
[2024-10-05 16:11:09] 2024-10-05 14:09:23,583 | INFO     | will  attempt to kill all subprocesses of pid=15865
[2024-10-05 16:11:09] 2024-10-05 14:09:24,014 | INFO     | process IDs to be killed: [15865] (in reverse order)
[2024-10-05 16:11:09] 2024-10-05 14:09:24,867 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 16:11:09] 2024-10-05 14:09:24,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 16:11:09] 2024-10-05 14:09:24,870 | INFO     | did not find any defunct processes belonging to 15865
[2024-10-05 16:11:09] 2024-10-05 14:09:24,874 | INFO     | did not find any defunct processes belonging to 15865
[2024-10-05 16:11:09] 2024-10-05 14:09:24,874 | INFO     | ready for new job
[2024-10-05 16:11:09] 2024-10-05 14:09:24,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 16:11:09] 2024-10-05 14:09:24,884 | INFO     | *************************************
[2024-10-05 16:11:09] 2024-10-05 14:09:24,884 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 16:11:09] 2024-10-05 14:09:24,884 | INFO     | *************************************
[2024-10-05 16:11:09] 2024-10-05 14:09:24,885 | INFO     | 
[2024-10-05 16:11:09] 2024-10-05 14:09:24,885 | INFO     | pilot is running in a VM
[2024-10-05 16:11:09] 2024-10-05 14:09:24,885 | INFO     | architecture information:
[2024-10-05 16:11:09] 2024-10-05 14:09:24,903 | INFO     | executing command: cat /etc/os-release
[2024-10-05 16:11:09] 2024-10-05 14:09:25,241 | INFO     | cat /etc/os-release:
[2024-10-05 16:11:09] NAME="CentOS Linux"
[2024-10-05 16:11:09] VERSION="7 (Core)"
[2024-10-05 16:11:09] ID="centos"
[2024-10-05 16:11:09] ID_LIKE="rhel fedora"
[2024-10-05 16:11:09] VERSION_ID="7"
[2024-10-05 16:11:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 16:11:09] ANSI_COLOR="0;31"
[2024-10-05 16:11:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 16:11:09] HOME_URL="https://www.centos.org/"
[2024-10-05 16:11:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 16:11:09] 
[2024-10-05 16:11:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 16:11:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 16:11:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 16:11:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 16:11:09] 
[2024-10-05 16:11:09] 2024-10-05 14:09:25,241 | INFO     | *************************************
[2024-10-05 16:11:09] 2024-10-05 14:09:25,745 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-05 16:11:09] 2024-10-05 14:09:25,961 | INFO     | sufficient remaining disk space (487126466560 B)
[2024-10-05 16:11:09] 2024-10-05 14:09:25,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 16:11:09] 2024-10-05 14:09:25,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 16:11:09] 2024-10-05 14:09:26,024 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-05 16:11:09] 2024-10-05 14:09:26,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-05 16:11:09] 2024-10-05 14:09:26,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 16:11:09] 2024-10-05 14:09:26,025 | INFO     | will abort loop
[2024-10-05 16:11:09] 2024-10-05 14:09:26,154 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 16:11:09] 2024-10-05 14:09:26,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 16:11:09] 2024-10-05 14:09:26,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 16:11:09] 2024-10-05 14:09:26,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 16:11:09] 2024-10-05 14:09:26,489 | INFO     | all data control threads have been joined
[2024-10-05 16:11:09] 2024-10-05 14:09:26,568 | INFO     | all payload control threads have been joined
[2024-10-05 16:11:09] 2024-10-05 14:09:26,765 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 16:11:09] 2024-10-05 14:09:26,968 | INFO     | [job] retrieve thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:26,975 | INFO     | all job control threads have been joined
[2024-10-05 16:11:09] 2024-10-05 14:09:27,030 | INFO     | [job] job monitor thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:27,188 | INFO     | [job] validate thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:27,262 | INFO     | [payload] failed_post thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:27,283 | INFO     | [payload] validate_post thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:27,495 | INFO     | [data] control thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:27,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 16:11:09] 2024-10-05 14:09:27,574 | INFO     | [payload] control thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:27,720 | INFO     | [data] copytool_in thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:27,981 | INFO     | [job] control thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:28,330 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:28,368 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:28,462 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:28,468 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:28,536 | INFO     | [job] queue monitor thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:28,771 | INFO     | [data] copytool_out thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:30,335 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 16:11:09] 2024-10-05 14:09:30,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729687848768)>', '<ExcThread(monitor, started 139729395750656)>']
[2024-10-05 16:11:09] 2024-10-05 14:09:31,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 16:11:09] 2024-10-05 14:09:31,183 | INFO     | [monitor] control thread has ended
[2024-10-05 16:11:09] 2024-10-05 14:09:35,743 | INFO     | all workflow threads have been joined
[2024-10-05 16:11:09] 2024-10-05 14:09:35,743 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 16:11:09] 2024-10-05 14:09:35,744 | INFO     | traces error code: 0
[2024-10-05 16:11:09] 2024-10-05 14:09:35,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 16:11:09] 2024-10-05 14:09:36,116 [wrapper] ==== pilot stdout END ====
[2024-10-05 16:11:09] 2024-10-05 14:09:36,200 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 16:11:09] 2024-10-05 14:09:36,243 [wrapper] pilotpid: 32591
[2024-10-05 16:11:09] 2024-10-05 14:09:36,274 [wrapper] Pilot exit status: 0
[2024-10-05 16:11:09] 2024-10-05 14:09:36,751 [wrapper] pandaids: 6355216566
[2024-10-05 16:11:09] 2024-10-05 14:09:37,637 [wrapper] cleanup supervisor_pilot 19504 32592
[2024-10-05 16:11:09] 2024-10-05 14:09:37,712 [wrapper] Test setup, not cleaning
[2024-10-05 16:11:09] 2024-10-05 14:09:37,763 [wrapper] ==== wrapper stdout END ====
[2024-10-05 16:11:09] 2024-10-05 14:09:37,804 [wrapper] ==== wrapper stderr END ====
[2024-10-05 16:11:09] 2024-10-05 14:09:37,955 [wrapper] apfmon messages muted
[2024-10-05 16:11:09]  *** Error codes and diagnostics ***
[2024-10-05 16:11:09]     "exeErrorCode": 0,
[2024-10-05 16:11:09]     "exeErrorDiag": "",
[2024-10-05 16:11:09]     "pilotErrorCode": 0,
[2024-10-05 16:11:09]     "pilotErrorDiag": "",
[2024-10-05 16:11:09]  *** Listing of results directory ***
[2024-10-05 16:11:09] total 879560
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc    484599 Oct  3 18:10 pilot3.tar.gz
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc      5653 Oct  3 18:16 queuedata.json
[2024-10-05 16:11:09] -rwx------. 1 boinc boinc     33814 Oct  3 18:16 runpilot2-wrapper.sh
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc       100 Oct  5 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 16:11:09] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 09:49 run_atlas
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc       105 Oct  5 09:49 job.xml
[2024-10-05 16:11:09] -rw-r--r--. 2 boinc boinc 638056322 Oct  5 09:49 EVNT.41466530._000163.pool.root.1
[2024-10-05 16:11:09] -rw-r--r--. 2 boinc boinc     17537 Oct  5 09:49 start_atlas.sh
[2024-10-05 16:11:09] drwxrwx--x. 2 boinc boinc        68 Oct  5 09:49 shared
[2024-10-05 16:11:09] -rw-r--r--. 2 boinc boinc    498166 Oct  5 09:49 input.tar.gz
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc      6346 Oct  5 09:49 init_data.xml
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc         0 Oct  5 09:49 boinc_lockfile
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc      2535 Oct  5 09:49 pandaJob.out
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc       424 Oct  5 09:49 setup.sh.local
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc   1024464 Oct  5 09:49 agis_schedconf.cvmfs.json
[2024-10-05 16:11:09] drwx------. 4 boinc boinc      4096 Oct  5 09:49 pilot3
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc 253385221 Oct  5 16:06 HITS.41481181._010093.pool.root.1
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc       532 Oct  5 16:07 boinc_task_state.xml
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc      1017 Oct  5 16:07 memory_monitor_summary.json
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc   1615815 Oct  5 16:07 agis_ddmendpoints.agis.ALL.json
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc    506838 Oct  5 16:07 log.41481181._010093.job.log.tgz.1
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc      7693 Oct  5 16:09 heartbeat.json
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc        95 Oct  5 16:09 pilot_heartbeat.json
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc      4460 Oct  5 16:09 pilotlog.txt
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc   2180931 Oct  5 16:09 log.41481181._010093.job.log.1
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc       357 Oct  5 16:09 output.list
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc       620 Oct  5 16:09 runtime_log
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc   2703360 Oct  5 16:09 result.tar.gz
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc       645 Oct  5 16:09 t7pLDmFgdG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmLbqKDmwmCEfm.diag
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc     10999 Oct  5 16:09 runtime_log.err
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc        28 Oct  5 16:11 wrapper_checkpoint.txt
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc      8192 Oct  5 16:11 boinc_mmap_file
[2024-10-05 16:11:09] -rw-r--r--. 1 boinc boinc     21594 Oct  5 16:11 stderr.txt
[2024-10-05 16:11:09] HITS file was successfully produced:
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc 253385221 Oct  5 16:06 shared/HITS.pool.root.1
[2024-10-05 16:11:09]  *** Contents of shared directory: ***
[2024-10-05 16:11:09] total 873700
[2024-10-05 16:11:09] -rw-r--r--. 2 boinc boinc 638056322 Oct  5 09:49 ATLAS.root_0
[2024-10-05 16:11:09] -rw-r--r--. 2 boinc boinc     17537 Oct  5 09:49 start_atlas.sh
[2024-10-05 16:11:09] -rw-r--r--. 2 boinc boinc    498166 Oct  5 09:49 input.tar.gz
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc 253385221 Oct  5 16:06 HITS.pool.root.1
[2024-10-05 16:11:09] -rw-------. 1 boinc boinc   2703360 Oct  5 16:09 result.tar.gz
16:11:11 (28375): run_atlas exited; CPU time 83669.544183
16:11:11 (28375): called boinc_finish(0)

</stderr_txt>
]]>

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