Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:30:57 (32606): wrapper (7.7.26015): starting
08:30:57 (32606): wrapper: running run_atlas (--nthreads 8)
[2024-10-05 08:30:57] Arguments: --nthreads 8
[2024-10-05 08:30:57] Threads: 8
[2024-10-05 08:30:57] Checking for CVMFS
[2024-10-05 08:30:57] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-05 08:30:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-05 08:30:57] Running cvmfs_config stat atlas.cern.ch
[2024-10-05 08:30:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-05 08:30:57] 2.11.2.0 17885 87781 94940 137996 2 111 20490524 25165824 3917 130560 0 61740573 99.914 33396907 8866 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-05 08:30:57] CVMFS is ok
[2024-10-05 08:30:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-05 08:30:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-05 08:30:57] Further information can be found at the LHC@home message board.
[2024-10-05 08:30:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-05 08:30:57] Checking for apptainer binary...
[2024-10-05 08:30:57] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-05 08:30:57] Running /usr/bin/apptainer --version
[2024-10-05 08:30:57] apptainer version 1.3.2-1.el7
[2024-10-05 08:30:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-05 08:30:59] cg-vwn412.simple-grid.lan
[2024-10-05 08:30:59] apptainer works
[2024-10-05 08:30:59] Set ATHENA_PROC_NUMBER=8
[2024-10-05 08:30:59] Set ATHENA_CORE_NUMBER=8
[2024-10-05 08:30:59] Starting ATLAS job with PandaID=6355216457
[2024-10-05 08:30:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 15:28:35]  *** The last 200 lines of the pilot log: ***
[2024-10-05 15:28:35] 2024-10-05 13:03:50,437 | INFO     | chi2: 5.170363329773377
[2024-10-05 15:28:35] 2024-10-05 13:03:50,437 | INFO     | model: linear, x: [1728109928.0, 1728109989.0, 1728110050.0, 1728110111.0, 1728110172.0, 1728110233.0, 1728110294.0, 1728110355.0, 1728110416.0, 1728110477.0, 1728
[2024-10-05 15:28:35] 2024-10-05 13:03:50,437 | INFO     | sum of square deviations: 16880800230.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,458 | INFO     | sum of deviations: 166263179838.99997
[2024-10-05 15:28:35] 2024-10-05 13:03:50,458 | INFO     | mean x: 1728121457.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,458 | INFO     | mean y: 2518462.0290237465
[2024-10-05 15:28:35] 2024-10-05 13:03:50,458 | INFO     | -- intersect: -17018177516.482988
[2024-10-05 15:28:35] 2024-10-05 13:03:50,459 | INFO     | intersect: -17018177516.482988
[2024-10-05 15:28:35] 2024-10-05 13:03:50,459 | INFO     | chi2: 4.410235778981515
[2024-10-05 15:28:35] 2024-10-05 13:03:50,459 | INFO     | current chi2=4.410235778981515 (change=14.701627377223003 %)
[2024-10-05 15:28:35] 2024-10-05 13:03:50,459 | INFO     | right removable region: 378
[2024-10-05 15:28:35] 2024-10-05 13:03:50,460 | INFO     | model: linear, x: [1728110233.0, 1728110294.0, 1728110355.0, 1728110416.0, 1728110477.0, 1728110538.0, 1728110599.0, 1728110660.0, 1728110721.0, 1728110782.0, 1728
[2024-10-05 15:28:35] 2024-10-05 13:03:50,460 | INFO     | sum of square deviations: 16880800230.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,465 | INFO     | sum of deviations: 42766028290.99999
[2024-10-05 15:28:35] 2024-10-05 13:03:50,465 | INFO     | mean x: 1728121762.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,465 | INFO     | mean y: 2535599.7862796835
[2024-10-05 15:28:35] 2024-10-05 13:03:50,465 | INFO     | -- intersect: -4375509466.622563
[2024-10-05 15:28:35] 2024-10-05 13:03:50,465 | INFO     | intersect: -4375509466.622563
[2024-10-05 15:28:35] 2024-10-05 13:03:50,466 | INFO     | chi2: 2.591488003375773
[2024-10-05 15:28:35] 2024-10-05 13:03:50,466 | INFO     | current chi2=2.591488003375773 (change=49.87802910382004 %)
[2024-10-05 15:28:35] 2024-10-05 13:03:50,466 | INFO     | model: linear, x: [1728110538.0, 1728110599.0, 1728110660.0, 1728110721.0, 1728110782.0, 1728110843.0, 1728110904.0, 1728110965.0, 1728111026.0, 1728111087.0, 1728
[2024-10-05 15:28:35] 2024-10-05 13:03:50,467 | INFO     | sum of square deviations: 16221466937.5
[2024-10-05 15:28:35] 2024-10-05 13:03:50,471 | INFO     | sum of deviations: -30388079335.00001
[2024-10-05 15:28:35] 2024-10-05 13:03:50,471 | INFO     | mean x: 1728121914.5
[2024-10-05 15:28:35] 2024-10-05 13:03:50,471 | INFO     | mean y: 2552519.6737967916
[2024-10-05 15:28:35] 2024-10-05 13:03:50,472 | INFO     | -- intersect: 3239886482.17617
[2024-10-05 15:28:35] 2024-10-05 13:03:50,472 | INFO     | intersect: 3239886482.17617
[2024-10-05 15:28:35] 2024-10-05 13:03:50,472 | INFO     | chi2: 1.3031202667276274
[2024-10-05 15:28:35] 2024-10-05 13:03:50,472 | INFO     | current chi2=1.3031202667276274 (change=49.71536564976831 %)
[2024-10-05 15:28:35] 2024-10-05 13:03:50,473 | INFO     | model: linear, x: [1728110843.0, 1728110904.0, 1728110965.0, 1728111026.0, 1728111087.0, 1728111148.0, 1728111209.0, 1728111270.0, 1728111331.0, 1728111392.0, 1728
[2024-10-05 15:28:35] 2024-10-05 13:03:50,482 | INFO     | sum of square deviations: 15579529320.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,487 | INFO     | sum of deviations: -58670569027.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,487 | INFO     | mean x: 1728122067.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,487 | INFO     | mean y: 2559200.5230352306
[2024-10-05 15:28:35] 2024-10-05 13:03:50,487 | INFO     | -- intersect: 6510451893.330357
[2024-10-05 15:28:35] 2024-10-05 13:03:50,487 | INFO     | intersect: 6510451893.330357
[2024-10-05 15:28:35] 2024-10-05 13:03:50,488 | INFO     | chi2: 0.9717987664747136
[2024-10-05 15:28:35] 2024-10-05 13:03:50,488 | INFO     | current chi2=0.9717987664747136 (change=25.425243449318952 %)
[2024-10-05 15:28:35] 2024-10-05 13:03:50,489 | INFO     | model: linear, x: [1728111148.0, 1728111209.0, 1728111270.0, 1728111331.0, 1728111392.0, 1728111453.0, 1728111514.0, 1728111575.0, 1728111636.0, 1728111697.0, 1728
[2024-10-05 15:28:35] 2024-10-05 13:03:50,489 | INFO     | sum of square deviations: 14954754815.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,493 | INFO     | sum of deviations: -55045819828.99997
[2024-10-05 15:28:35] 2024-10-05 13:03:50,493 | INFO     | mean x: 1728122219.5
[2024-10-05 15:28:35] 2024-10-05 13:03:50,494 | INFO     | mean y: 2558303.318681319
[2024-10-05 15:28:35] 2024-10-05 13:03:50,494 | INFO     | -- intersect: 6363471973.509706
[2024-10-05 15:28:35] 2024-10-05 13:03:50,494 | INFO     | intersect: 6363471973.509706
[2024-10-05 15:28:35] 2024-10-05 13:03:50,494 | INFO     | chi2: 0.9587141081224059
[2024-10-05 15:28:35] 2024-10-05 13:03:50,494 | INFO     | current chi2=0.9587141081224059 (change=1.346437020060596 %)
[2024-10-05 15:28:35] 2024-10-05 13:03:50,495 | INFO     | left removable region: 40
[2024-10-05 15:28:35] 2024-10-05 13:03:50,495 | INFO     | model: linear, x: [1728112368.0, 1728112429.0, 1728112490.0, 1728112551.0, 1728112612.0, 1728112673.0, 1728112734.0, 1728112795.0, 1728112856.0, 1728112917.0, 1728
[2024-10-05 15:28:35] 2024-10-05 13:03:50,495 | INFO     | sum of square deviations: 11973599384.5
[2024-10-05 15:28:35] 2024-10-05 13:03:50,499 | INFO     | sum of deviations: 17137601019.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,506 | INFO     | mean x: 1728122646.5
[2024-10-05 15:28:35] 2024-10-05 13:03:50,506 | INFO     | mean y: 2551697.0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,507 | INFO     | -- intersect: -2470879681.1997385
[2024-10-05 15:28:35] 2024-10-05 13:03:50,507 | INFO     | intersect: -2470879681.1997385
[2024-10-05 15:28:35] 2024-10-05 13:03:50,507 | INFO     | chi2: 0.025013315861002867
[2024-10-05 15:28:35] 2024-10-05 13:03:50,507 | INFO     | -- intersect: -2470879681.1997385
[2024-10-05 15:28:35] 2024-10-05 13:03:50,508 | INFO     | current memory leak: 1.43 B/s (using 338 data points, chi2=0.03)
[2024-10-05 15:28:35] 2024-10-05 13:03:50,509 | INFO     | ..............................
[2024-10-05 15:28:35] 2024-10-05 13:03:50,509 | INFO     | . Timing measurements:
[2024-10-05 15:28:35] 2024-10-05 13:03:50,509 | INFO     | . get job = 0 s
[2024-10-05 15:28:35] 2024-10-05 13:03:50,509 | INFO     | . initial setup = 2 s
[2024-10-05 15:28:35] 2024-10-05 13:03:50,509 | INFO     | . payload setup = 9 s
[2024-10-05 15:28:35] 2024-10-05 13:03:50,509 | INFO     | . stage-in = 0 s
[2024-10-05 15:28:35] 2024-10-05 13:03:50,509 | INFO     | . payload execution = 23435 s
[2024-10-05 15:28:35] 2024-10-05 13:03:50,509 | INFO     | . stage-out = 3 s
[2024-10-05 15:28:35] 2024-10-05 13:03:50,509 | INFO     | . log creation = 1 s
[2024-10-05 15:28:35] 2024-10-05 13:03:50,510 | INFO     | ..............................
[2024-10-05 15:28:35] 2024-10-05 13:03:50,670 | INFO     | 
[2024-10-05 15:28:35] 2024-10-05 13:03:50,673 | INFO     | job summary report
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | --------------------------------------------------
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | PanDA job id: 6355216457
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | task id: 41481181
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | errors: (none)
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | pilot state: finished 
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | transexitcode: 0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | exeerrorcode: 0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | exeerrordiag: 
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | exitcode: 0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | exitmsg: OK
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | cpuconsumptiontime: 87870 s
[2024-10-05 15:28:35] 2024-10-05 13:03:50,674 | INFO     | nevents: 400
[2024-10-05 15:28:35] 2024-10-05 13:03:50,675 | INFO     | neventsw: 0
[2024-10-05 15:28:35] 2024-10-05 13:03:50,675 | INFO     | pid: 13084
[2024-10-05 15:28:35] 2024-10-05 13:03:50,675 | INFO     | pgrp: 13084
[2024-10-05 15:28:35] 2024-10-05 13:03:50,675 | INFO     | corecount: 8
[2024-10-05 15:28:35] 2024-10-05 13:03:50,675 | INFO     | event service: False
[2024-10-05 15:28:35] 2024-10-05 13:03:50,675 | INFO     | sizes: {0: 2435435, 1: 2435435, 9: 2435669, 12: 2435697, 23449: 2470066, 23452: 2479090, 23455: 2479274, 23530: 2479444}
[2024-10-05 15:28:35] 2024-10-05 13:03:50,675 | INFO     | --------------------------------------------------
[2024-10-05 15:28:35] 2024-10-05 13:03:50,675 | INFO     | 
[2024-10-05 15:28:35] 2024-10-05 13:03:50,675 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-05 15:28:35] 2024-10-05 13:03:51,199 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,199 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,200 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,201 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 15:28:35] 2024-10-05 13:03:51,201 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,201 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 15:28:35] 2024-10-05 13:03:51,201 | INFO     | job 6355216457 has completed (purged errors)
[2024-10-05 15:28:35] 2024-10-05 13:03:51,201 | INFO     | overall cleanup function is called
[2024-10-05 15:28:35] 2024-10-05 13:03:52,213 | INFO     | --- collectZombieJob: --- 10, [13084]
[2024-10-05 15:28:35] 2024-10-05 13:03:52,214 | INFO     | zombie collector waiting for pid 13084
[2024-10-05 15:28:35] 2024-10-05 13:03:52,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 15:28:35] 2024-10-05 13:03:52,214 | INFO     | collected zombie processes
[2024-10-05 15:28:35] 2024-10-05 13:03:52,214 | INFO     | will  attempt to kill all subprocesses of pid=13084
[2024-10-05 15:28:35] 2024-10-05 13:03:52,975 | INFO     | process IDs to be killed: [13084] (in reverse order)
[2024-10-05 15:28:35] 2024-10-05 13:03:53,856 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 15:28:35] 2024-10-05 13:03:53,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 15:28:35] 2024-10-05 13:03:53,859 | INFO     | did not find any defunct processes belonging to 13084
[2024-10-05 15:28:35] 2024-10-05 13:03:53,862 | INFO     | did not find any defunct processes belonging to 13084
[2024-10-05 15:28:35] 2024-10-05 13:03:53,863 | INFO     | ready for new job
[2024-10-05 15:28:35] 2024-10-05 13:03:53,863 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 15:28:35] 2024-10-05 13:03:53,865 | INFO     | *************************************
[2024-10-05 15:28:35] 2024-10-05 13:03:53,865 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 15:28:35] 2024-10-05 13:03:53,865 | INFO     | *************************************
[2024-10-05 15:28:35] 2024-10-05 13:03:53,865 | INFO     | 
[2024-10-05 15:28:35] 2024-10-05 13:03:53,866 | INFO     | pilot is running in a VM
[2024-10-05 15:28:35] 2024-10-05 13:03:53,866 | INFO     | architecture information:
[2024-10-05 15:28:35] 2024-10-05 13:03:53,869 | INFO     | executing command: cat /etc/os-release
[2024-10-05 15:28:35] 2024-10-05 13:03:54,131 | INFO     | cat /etc/os-release:
[2024-10-05 15:28:35] NAME="CentOS Linux"
[2024-10-05 15:28:35] VERSION="7 (Core)"
[2024-10-05 15:28:35] ID="centos"
[2024-10-05 15:28:35] ID_LIKE="rhel fedora"
[2024-10-05 15:28:35] VERSION_ID="7"
[2024-10-05 15:28:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 15:28:35] ANSI_COLOR="0;31"
[2024-10-05 15:28:35] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 15:28:35] HOME_URL="https://www.centos.org/"
[2024-10-05 15:28:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 15:28:35] 
[2024-10-05 15:28:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 15:28:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 15:28:35] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 15:28:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 15:28:35] 
[2024-10-05 15:28:35] 2024-10-05 13:03:54,131 | INFO     | *************************************
[2024-10-05 15:28:35] 2024-10-05 13:03:54,634 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-05 15:28:35] 2024-10-05 13:03:54,899 | INFO     | sufficient remaining disk space (488263122944 B)
[2024-10-05 15:28:35] 2024-10-05 13:03:54,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 15:28:35] 2024-10-05 13:03:54,899 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 15:28:35] 2024-10-05 13:03:54,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 15:28:35] 2024-10-05 13:03:54,900 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-05 15:28:35] 2024-10-05 13:03:54,901 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 15:28:35] 2024-10-05 13:03:54,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 15:28:35] 2024-10-05 13:03:54,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 15:28:35] 2024-10-05 13:03:55,008 | INFO     | all data control threads have been joined
[2024-10-05 15:28:35] 2024-10-05 13:03:55,013 | INFO     | all payload control threads have been joined
[2024-10-05 15:28:35] 2024-10-05 13:03:55,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 15:28:35] 2024-10-05 13:03:55,207 | INFO     | aborting loop
[2024-10-05 15:28:35] 2024-10-05 13:03:55,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 15:28:35] 2024-10-05 13:03:55,905 | INFO     | [job] retrieve thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:55,971 | INFO     | all job control threads have been joined
[2024-10-05 15:28:35] 2024-10-05 13:03:56,014 | INFO     | [data] control thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,019 | INFO     | [payload] control thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,071 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,096 | INFO     | [payload] failed_post thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,153 | INFO     | [data] copytool_in thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 15:28:35] 2024-10-05 13:03:56,210 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,212 | INFO     | [job] job monitor thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,218 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,296 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,690 | INFO     | [job] queue monitor thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,794 | INFO     | [job] validate thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:56,977 | INFO     | [job] control thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:57,378 | INFO     | [payload] validate_post thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:58,189 | INFO     | [data] copytool_out thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:03:58,908 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 15:28:35] 2024-10-05 13:04:00,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956161771328)>', '<ExcThread(monitor, started 139955561015040)>']
[2024-10-05 15:28:35] 2024-10-05 13:04:00,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 15:28:35] 2024-10-05 13:04:00,937 | INFO     | [monitor] control thread has ended
[2024-10-05 15:28:35] 2024-10-05 13:04:05,428 | INFO     | all workflow threads have been joined
[2024-10-05 15:28:35] 2024-10-05 13:04:05,429 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 15:28:35] 2024-10-05 13:04:05,429 | INFO     | traces error code: 0
[2024-10-05 15:28:35] 2024-10-05 13:04:05,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 15:28:35] 2024-10-05 13:04:05,730 [wrapper] ==== pilot stdout END ====
[2024-10-05 15:28:35] 2024-10-05 13:04:05,834 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 15:28:35] 2024-10-05 13:04:05,927 [wrapper] pilotpid: 5799
[2024-10-05 15:28:35] 2024-10-05 13:04:06,054 [wrapper] Pilot exit status: 0
[2024-10-05 15:28:35] 2024-10-05 13:04:06,488 [wrapper] pandaids: 6355216457
[2024-10-05 15:28:35] 2024-10-05 13:04:07,338 [wrapper] cleanup supervisor_pilot 26485 5800
[2024-10-05 15:28:35] 2024-10-05 13:04:07,444 [wrapper] Test setup, not cleaning
[2024-10-05 15:28:35] 2024-10-05 13:04:07,544 [wrapper] ==== wrapper stdout END ====
[2024-10-05 15:28:35] 2024-10-05 13:04:07,628 [wrapper] ==== wrapper stderr END ====
[2024-10-05 15:28:35] 2024-10-05 13:04:07,763 [wrapper] apfmon messages muted
[2024-10-05 15:28:35]  *** Error codes and diagnostics ***
[2024-10-05 15:28:35]     "exeErrorCode": 0,
[2024-10-05 15:28:35]     "exeErrorDiag": "",
[2024-10-05 15:28:35]     "pilotErrorCode": 0,
[2024-10-05 15:28:35]     "pilotErrorDiag": "",
[2024-10-05 15:28:35]  *** Listing of results directory ***
[2024-10-05 15:28:35] total 894940
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc    484599 Oct  3 18:00 pilot3.tar.gz
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc      5653 Oct  3 18:03 queuedata.json
[2024-10-05 15:28:35] -rwx------. 1 boinc boinc     33814 Oct  3 18:05 runpilot2-wrapper.sh
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc       100 Oct  5 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 15:28:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 08:30 run_atlas
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc       105 Oct  5 08:30 job.xml
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc      6347 Oct  5 08:30 init_data.xml
[2024-10-05 15:28:35] -rw-r--r--. 2 boinc boinc 639233019 Oct  5 08:30 EVNT.41466530._000161.pool.root.1
[2024-10-05 15:28:35] -rw-r--r--. 2 boinc boinc     17537 Oct  5 08:30 start_atlas.sh
[2024-10-05 15:28:35] drwxrwx--x. 2 boinc boinc        68 Oct  5 08:30 shared
[2024-10-05 15:28:35] -rw-r--r--. 2 boinc boinc    498170 Oct  5 08:30 input.tar.gz
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc         0 Oct  5 08:30 boinc_lockfile
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc      2535 Oct  5 08:30 pandaJob.out
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc       424 Oct  5 08:31 setup.sh.local
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc   1024456 Oct  5 08:31 agis_schedconf.cvmfs.json
[2024-10-05 15:28:35] drwx------. 4 boinc boinc      4096 Oct  5 08:31 pilot3
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc 267988177 Oct  5 15:00 HITS.41481181._009986.pool.root.1
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc       532 Oct  5 15:01 boinc_task_state.xml
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc      1018 Oct  5 15:02 memory_monitor_summary.json
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc   1615815 Oct  5 15:02 agis_ddmendpoints.agis.ALL.json
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc    503498 Oct  5 15:02 log.41481181._009986.job.log.tgz.1
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc        95 Oct  5 15:03 pilot_heartbeat.json
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc      7692 Oct  5 15:03 heartbeat.json
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc      4397 Oct  5 15:04 pilotlog.txt
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc   2169131 Oct  5 15:04 log.41481181._009986.job.log.1
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc       357 Oct  5 15:04 output.list
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc       620 Oct  5 15:04 runtime_log
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc   2693120 Oct  5 15:04 result.tar.gz
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc       646 Oct  5 15:04 Z2OKDmHVdG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmyZqKDm37t23m.diag
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc     10999 Oct  5 15:04 runtime_log.err
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc      8192 Oct  5 15:28 boinc_mmap_file
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc        28 Oct  5 15:28 wrapper_checkpoint.txt
[2024-10-05 15:28:35] -rw-r--r--. 1 boinc boinc     21523 Oct  5 15:28 stderr.txt
[2024-10-05 15:28:35] HITS file was successfully produced:
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc 267988177 Oct  5 15:00 shared/HITS.pool.root.1
[2024-10-05 15:28:35]  *** Contents of shared directory: ***
[2024-10-05 15:28:35] total 889100
[2024-10-05 15:28:35] -rw-r--r--. 2 boinc boinc 639233019 Oct  5 08:30 ATLAS.root_0
[2024-10-05 15:28:35] -rw-r--r--. 2 boinc boinc     17537 Oct  5 08:30 start_atlas.sh
[2024-10-05 15:28:35] -rw-r--r--. 2 boinc boinc    498170 Oct  5 08:30 input.tar.gz
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc 267988177 Oct  5 15:00 HITS.pool.root.1
[2024-10-05 15:28:35] -rw-------. 1 boinc boinc   2693120 Oct  5 15:04 result.tar.gz
15:28:37 (32606): run_atlas exited; CPU time 87781.301798
15:28:37 (32606): called boinc_finish(0)

</stderr_txt>
]]>

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