Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-10-04 00:03:42 (10852): Detected: vboxwrapper 26206
2024-10-04 00:03:42 (10852): Detected: BOINC client v8.0.2
2024-10-04 00:03:43 (10852): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2024-10-04 00:03:43 (10852): Successfully copied 'init_data.xml' to the shared directory.
2024-10-04 00:03:44 (10852): Create VM. (boinc_517a01de9eb0002a, slot#6)
2024-10-04 00:03:44 (10852): Setting Memory Size for VM. (4800MB)
2024-10-04 00:03:44 (10852): Setting CPU Count for VM. (8)
2024-10-04 00:03:45 (10852): Setting Chipset Options for VM.
2024-10-04 00:03:45 (10852): Setting Graphics Controller Options for VM.
2024-10-04 00:03:45 (10852): Setting Boot Options for VM.
2024-10-04 00:03:46 (10852): Setting Network Configuration for NAT.
2024-10-04 00:03:46 (10852): Enabling VM Network Access.
2024-10-04 00:03:46 (10852): Disabling USB Support for VM.
2024-10-04 00:03:46 (10852): Disabling COM Port Support for VM.
2024-10-04 00:03:47 (10852): Disabling LPT Port Support for VM.
2024-10-04 00:03:47 (10852): Disabling Audio Support for VM.
2024-10-04 00:03:47 (10852): Disabling Clipboard Support for VM.
2024-10-04 00:03:47 (10852): Disabling Drag and Drop Support for VM.
2024-10-04 00:03:48 (10852): Adding storage controller(s) to VM.
2024-10-04 00:03:48 (10852): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-10-04 00:03:51 (10852): Adding VirtualBox Guest Additions to VM.
2024-10-04 00:03:51 (10852): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-10-04 00:03:52 (10852): forwarding host port 53392 to guest port 80
2024-10-04 00:03:52 (10852): Enabling remote desktop for VM.
2024-10-04 00:03:52 (10852): Required extension pack not installed, remote desktop not enabled.
2024-10-04 00:03:52 (10852): Enabling shared directory for VM.
2024-10-04 00:03:53 (10852): Starting VM using VBoxManage interface. (boinc_517a01de9eb0002a, slot#6)
2024-10-04 00:04:01 (10852): Successfully started VM. (PID = '9068')
2024-10-04 00:04:01 (10852): Reporting VM Process ID to BOINC.
2024-10-04 00:04:01 (10852): Guest Log: BIOS: VirtualBox 7.0.6
2024-10-04 00:04:01 (10852): Guest Log: CPUID EDX: 0x178bfbff
2024-10-04 00:04:01 (10852): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-10-04 00:04:01 (10852): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-10-04 00:04:01 (10852): VM state change detected. (old = 'poweredoff', new = 'running')
2024-10-04 00:04:01 (10852): Detected: Web Application Enabled (http://localhost:53392)
2024-10-04 00:04:01 (10852): Preference change detected
2024-10-04 00:04:01 (10852): Setting CPU throttle for VM. (75%)
2024-10-04 00:04:02 (10852): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-10-04 00:04:03 (10852): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-10-04 00:04:03 (10852): Guest Log: BIOS: Booting from Hard Disk...
2024-10-04 00:04:06 (10852): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-10-04 00:04:06 (10852): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-10-04 00:04:06 (10852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-10-04 00:04:15 (10852): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-10-04 00:04:15 (10852): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-10-04 00:04:27 (10852): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-10-04 00:04:27 (10852): Guest Log: 00:00:00.000213 main     Log opened 2024-10-04T00:04:25.550782000Z
2024-10-04 00:04:27 (10852): Guest Log: 00:00:00.000324 main     OS Product: Linux
2024-10-04 00:04:27 (10852): Guest Log: 00:00:00.000368 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-10-04 00:04:27 (10852): Guest Log: 00:00:00.000404 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-10-04 00:04:27 (10852): Guest Log: 00:00:00.000441 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-10-04 00:04:27 (10852): Guest Log: 00:00:00.000442 main     Process ID: 1362
2024-10-04 00:04:27 (10852): Guest Log: 00:00:00.000443 main     Package type: LINUX_64BITS_GENERIC
2024-10-04 00:04:27 (10852): Guest Log: 00:00:00.001359 main     5.2.32 r132073 started. Verbose level = 0
2024-10-04 00:04:27 (10852): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-10-04 00:04:27 (10852): Guest Log: [INFO] Mounting shared directory
2024-10-04 00:04:27 (10852): Guest Log: [INFO] Checking for init_data.xml
2024-10-04 00:04:37 (10852): Guest Log: 00:00:10.034582 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 787 889 382 000ns (GuestNow=1 727 971 477 665 359 000 ns GuestLast=1 728 000 265 554 741 000 ns fSetTimeLastLoop=true )
2024-10-04 00:04:41 (10852): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-10-04 00:04:41 (10852): Guest Log: [INFO] Detected branch: prod
2024-10-04 00:04:42 (10852): Guest Log: This is the prod version of the ATLAS job wrapper
2024-10-04 00:04:42 (10852): Guest Log: Copying input files
2024-10-04 00:04:50 (10852): VM state change detected. (old = 'running', new = 'paused')
2024-10-04 00:05:10 (10852): VM state change detected. (old = 'paused', new = 'running')
2024-10-04 00:05:18 (10852): Guest Log: Copied input files into RunAtlas.
2024-10-04 00:05:18 (10852): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-10-04 00:05:18 (10852): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-10-04 00:05:18 (10852): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-10-04 00:05:18 (10852): Guest Log: Further information can be found at the LHC@home message board.
2024-10-04 00:05:40 (10852): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-10-04 00:05:40 (10852): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-10-04 00:05:41 (10852): Guest Log: 2.6.3.0 1644 0 32364 137937 4 1 3120121 4096000 0 65024 0 0 n/a 1236 224 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-10-04 00:05:43 (10852): Guest Log: copied the webapp to /var/www
2024-10-04 00:05:44 (10852): Guest Log: ATHENA_PROC_NUMBER=8
2024-10-04 00:05:44 (10852): Guest Log: ATHENA_CORE_NUMBER=8
2024-10-04 00:05:46 (10852): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-10-04 00:05:46 (10852): Guest Log:  *** Starting ATLAS job. (PandaID=6355180776 taskID=41481181) ***
2024-10-04 01:44:29 (10852): Status Report: Elapsed Time: '6000.000000'
2024-10-04 01:44:29 (10852): Status Report: CPU Time: '20772.875000'
2024-10-04 03:24:37 (10852): Status Report: Elapsed Time: '12000.000000'
2024-10-04 03:24:37 (10852): Status Report: CPU Time: '56736.531250'
2024-10-04 04:06:35 (10852): VM state change detected. (old = 'running', new = 'paused')
2024-10-04 04:06:55 (10852): VM state change detected. (old = 'paused', new = 'running')
2024-10-04 05:05:13 (10852): Status Report: Elapsed Time: '18000.000000'
2024-10-04 05:05:13 (10852): Status Report: CPU Time: '92751.109375'
2024-10-04 05:20:48 (10852): Guest Log:  *** Job finished ***
2024-10-04 05:20:48 (10852): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:03,922 | INFO     | [payload] run_realtimelog thread has finished
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:04,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:08,876 | INFO     | [data] queue_monitor thread has finished
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:10,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110840489792)>', '<ExcThread(monitor, started 140109819148032)>']
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:11,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:11,338 | INFO     | [monitor] control thread has ended
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:15,607 | INFO     | all workflow threads have been joined
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:15,608 | INFO     | end of generic workflow (traces error code: 0)
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:15,609 | INFO     | traces error code: 0
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:15,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:15,698 [wrapper] ==== pilot stdout END ====
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:15,703 [wrapper] ==== wrapper stdout RESUME ====
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:15,708 [wrapper] pilotpid: 6127
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:15,713 [wrapper] Pilot exit status: 0
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:16,413 [wrapper] pandaids: 6355180776
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:16,460 [wrapper] cleanup supervisor_pilot 16161 6128
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:16,473 [wrapper] Test setup, not cleaning
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:16,479 [wrapper] ==== wrapper stdout END ====
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:16,484 [wrapper] ==== wrapper stderr END ====
2024-10-04 05:20:48 (10852): Guest Log: 2024-10-03 21:20:16,494 [wrapper] apfmon messages muted
2024-10-04 05:20:48 (10852): Guest Log:  *** Error codes and diagnostics ***
2024-10-04 05:20:48 (10852): Guest Log:     "exeErrorCode": 0,
2024-10-04 05:20:48 (10852): Guest Log:     "exeErrorDiag": "",
2024-10-04 05:20:48 (10852): Guest Log:     "pilotErrorCode": 0,
2024-10-04 05:20:48 (10852): Guest Log:     "pilotErrorDiag": "",
2024-10-04 05:20:48 (10852): Guest Log:  *** Listing of results directory ***
2024-10-04 05:20:48 (10852): Guest Log: total 267260
2024-10-04 05:20:48 (10852): Guest Log: -rw-r--r--. 1 atlas atlas    484599 Oct  3 12:32 pilot3.tar.gz
2024-10-04 05:20:48 (10852): Guest Log: -rwx------. 1 atlas atlas     33814 Oct  3 12:43 runpilot2-wrapper.sh
2024-10-04 05:20:48 (10852): Guest Log: -rw-r--r--. 1 atlas atlas      5653 Oct  3 12:43 queuedata.json
2024-10-04 05:20:48 (10852): Guest Log: -rwxr-xr-x. 1 atlas atlas      8896 Oct  3 16:04 init_data.xml
2024-10-04 05:20:48 (10852): Guest Log: -rwxr-xr-x. 1 atlas atlas    498170 Oct  3 16:04 input.tar.gz
2024-10-04 05:20:48 (10852): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Oct  3 16:04 start_atlas.sh
2024-10-04 05:20:48 (10852): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  3 16:04 EVNT.41466530._000133.pool.root.1 -> /data/./ATLAS.root_0
2024-10-04 05:20:48 (10852): Guest Log: -rw-r--r--. 1 atlas atlas      2533 Oct  3 16:05 pandaJob.out
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas       424 Oct  3 16:07 setup.sh.local
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas   1024548 Oct  3 16:13 agis_schedconf.cvmfs.json
2024-10-04 05:20:48 (10852): Guest Log: drwx------. 4 atlas atlas      4096 Oct  3 16:14 pilot3
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas 266463837 Oct  3 21:18 HITS.41481181._008390.pool.root.1
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas      1044 Oct  3 21:19 memory_monitor_summary.json
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas   1615815 Oct  3 21:19 agis_ddmendpoints.agis.ALL.json
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas    401935 Oct  3 21:19 log.41481181._008390.job.log.tgz.1
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas      7746 Oct  3 21:19 heartbeat.json
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas        95 Oct  3 21:20 pilot_heartbeat.json
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas      4271 Oct  3 21:20 pilotlog.txt
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas   1303643 Oct  3 21:20 log.41481181._008390.job.log.1
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas       357 Oct  3 21:20 output.list
2024-10-04 05:20:48 (10852): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  3 21:20 runtime_log
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas   1720320 Oct  3 21:20 result.tar.gz
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas       651 Oct  3 21:20 uEFODmfMaG6n9Rq4apOajLDm4fhM0noT9bVorHsSDmDWcKDmGzT6Do.diag
2024-10-04 05:20:48 (10852): Guest Log: -rw-r--r--. 1 atlas atlas     10937 Oct  3 21:20 runtime_log.err
2024-10-04 05:20:48 (10852): Guest Log: Looking for outputfile HITS.41481181._008390.pool.root.1
2024-10-04 05:20:48 (10852): Guest Log: HITS file was successfully produced
2024-10-04 05:20:48 (10852): Guest Log: -rw-------. 1 atlas atlas 266463837 Oct  3 21:18 /home/atlas/RunAtlas/HITS.41481181._008390.pool.root.1
2024-10-04 05:20:49 (10852): Guest Log: Successfully finished the ATLAS job!
2024-10-04 05:20:49 (10852): Guest Log: Copying the results back to the shared directory!
2024-10-04 05:20:49 (10852): Guest Log:  *** Contents of shared directory: ***
2024-10-04 05:20:49 (10852): Guest Log: total 886316
2024-10-04 05:20:49 (10852): Guest Log: -rwxrwxrwx. 1 root root 638869100 Oct  3 16:03 ATLAS.root_0
2024-10-04 05:20:49 (10852): Guest Log: -rwxrwxrwx. 1 root root 266463837 Oct  3  2024 HITS.pool.root.1
2024-10-04 05:20:49 (10852): Guest Log: -rwxrwxrwx. 1 root root      8896 Oct  3 16:03 init_data.xml
2024-10-04 05:20:49 (10852): Guest Log: -rwxrwxrwx. 1 root root    498170 Oct  3 16:02 input.tar.gz
2024-10-04 05:20:49 (10852): Guest Log: -rwxrwxrwx. 1 root root   1720320 Oct  3  2024 result.tar.gz
2024-10-04 05:20:49 (10852): Guest Log: -rwxrwxrwx. 1 root root     17537 Oct  3 16:02 start_atlas.sh
2024-10-04 05:20:49 (10852): Guest Log:  *** Success! Shutting down the machine. ***
2024-10-04 05:20:49 (10852): VM Completion File Detected.
2024-10-04 05:20:49 (10852): Powering off VM.
2024-10-04 05:20:50 (10852): Successfully stopped VM.
2024-10-04 05:20:50 (10852): Deregistering VM. (boinc_517a01de9eb0002a, slot#6)
2024-10-04 05:20:50 (10852): Removing network bandwidth throttle group from VM.
2024-10-04 05:20:50 (10852): Removing VM from VirtualBox.
05:20:55 (10852): called boinc_finish(0)

</stderr_txt>
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