Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:53:58 (2266): wrapper (7.7.26015): starting
11:53:58 (2266): wrapper: running run_atlas (--nthreads 8)
[2024-10-05 11:53:58] Arguments: --nthreads 8
[2024-10-05 11:53:58] Threads: 8
[2024-10-05 11:53:58] Checking for CVMFS
[2024-10-05 11:53:59] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-05 11:53:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-05 11:53:59] Running cvmfs_config stat atlas.cern.ch
[2024-10-05 11:54:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-05 11:54:01] 2.11.2.0 22494 56988 83840 138000 2 16 20398895 25165824 4578 130560 0 40666279 99.946 20848710 9219 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-05 11:54:01] CVMFS is ok
[2024-10-05 11:54:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-05 11:54:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-05 11:54:01] Further information can be found at the LHC@home message board.
[2024-10-05 11:54:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-05 11:54:01] Checking for apptainer binary...
[2024-10-05 11:54:01] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-05 11:54:01] Running /usr/bin/apptainer --version
[2024-10-05 11:54:01] apptainer version 1.3.2-1.el7
[2024-10-05 11:54:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-05 12:03:10] cg-vwn446.simple-grid.lan
[2024-10-05 12:03:10] apptainer works
[2024-10-05 12:03:11] Set ATHENA_PROC_NUMBER=8
[2024-10-05 12:03:11] Set ATHENA_CORE_NUMBER=8
[2024-10-05 12:03:11] Starting ATLAS job with PandaID=6355180425
[2024-10-05 12:03:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 18:50:29]  *** The last 200 lines of the pilot log: ***
[2024-10-05 18:50:29] 2024-10-05 16:38:55,162 | INFO     | chi2: 5.001042291946978
[2024-10-05 18:50:29] 2024-10-05 16:38:55,162 | INFO     | model: linear, x: [1728122662.0, 1728122723.0, 1728122784.0, 1728122845.0, 1728122906.0, 1728122967.0, 1728123028.0, 1728123089.0, 1728123150.0, 1728123211.0, 1728
[2024-10-05 18:50:29] 2024-10-05 16:38:55,163 | INFO     | sum of square deviations: 17284846875.5
[2024-10-05 18:50:29] 2024-10-05 16:38:55,178 | INFO     | sum of deviations: 209833211096.50006
[2024-10-05 18:50:29] 2024-10-05 16:38:55,178 | INFO     | mean x: 1728134282.5
[2024-10-05 18:50:29] 2024-10-05 16:38:55,178 | INFO     | mean y: 2511581.9083769633
[2024-10-05 18:50:29] 2024-10-05 16:38:55,178 | INFO     | -- intersect: -20976555708.349674
[2024-10-05 18:50:29] 2024-10-05 16:38:55,178 | INFO     | intersect: -20976555708.349674
[2024-10-05 18:50:29] 2024-10-05 16:38:55,179 | INFO     | chi2: 4.241372967932006
[2024-10-05 18:50:29] 2024-10-05 16:38:55,179 | INFO     | current chi2=4.241372967932006 (change=15.19021995151378 %)
[2024-10-05 18:50:29] 2024-10-05 16:38:55,179 | INFO     | right removable region: 381
[2024-10-05 18:50:29] 2024-10-05 16:38:55,180 | INFO     | model: linear, x: [1728122967.0, 1728123028.0, 1728123089.0, 1728123150.0, 1728123211.0, 1728123272.0, 1728123333.0, 1728123394.0, 1728123455.0, 1728123516.0, 1728
[2024-10-05 18:50:29] 2024-10-05 16:38:55,180 | INFO     | sum of square deviations: 17284846875.5
[2024-10-05 18:50:29] 2024-10-05 16:38:55,184 | INFO     | sum of deviations: 86613671128.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,185 | INFO     | mean x: 1728134587.5
[2024-10-05 18:50:29] 2024-10-05 16:38:55,185 | INFO     | mean y: 2528535.795811518
[2024-10-05 18:50:29] 2024-10-05 16:38:55,185 | INFO     | -- intersect: -8657084239.762384
[2024-10-05 18:50:29] 2024-10-05 16:38:55,185 | INFO     | intersect: -8657084239.762384
[2024-10-05 18:50:29] 2024-10-05 16:38:55,185 | INFO     | chi2: 2.489955662052132
[2024-10-05 18:50:29] 2024-10-05 16:38:55,186 | INFO     | current chi2=2.489955662052132 (change=50.211265638332435 %)
[2024-10-05 18:50:29] 2024-10-05 16:38:55,186 | INFO     | model: linear, x: [1728123272.0, 1728123333.0, 1728123394.0, 1728123455.0, 1728123516.0, 1728123577.0, 1728123638.0, 1728123699.0, 1728123760.0, 1728123821.0, 1728
[2024-10-05 18:50:29] 2024-10-05 16:38:55,186 | INFO     | sum of square deviations: 16614964548.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,190 | INFO     | sum of deviations: 13184985788.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,190 | INFO     | mean x: 1728134740.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,191 | INFO     | mean y: 2545252.0132625992
[2024-10-05 18:50:29] 2024-10-05 16:38:55,191 | INFO     | -- intersect: -1368834862.6311493
[2024-10-05 18:50:29] 2024-10-05 16:38:55,191 | INFO     | intersect: -1368834862.6311493
[2024-10-05 18:50:29] 2024-10-05 16:38:55,191 | INFO     | chi2: 1.2405088639348596
[2024-10-05 18:50:29] 2024-10-05 16:38:55,191 | INFO     | current chi2=1.2405088639348596 (change=50.17947978589801 %)
[2024-10-05 18:50:29] 2024-10-05 16:38:55,192 | INFO     | model: linear, x: [1728123577.0, 1728123638.0, 1728123699.0, 1728123760.0, 1728123821.0, 1728123882.0, 1728123943.0, 1728124004.0, 1728124065.0, 1728124126.0, 1728
[2024-10-05 18:50:29] 2024-10-05 16:38:55,192 | INFO     | sum of square deviations: 15962617433.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,196 | INFO     | sum of deviations: -22210747027.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,197 | INFO     | mean x: 1728134892.5
[2024-10-05 18:50:29] 2024-10-05 16:38:55,197 | INFO     | mean y: 2553500.4677419355
[2024-10-05 18:50:29] 2024-10-05 16:38:55,197 | INFO     | -- intersect: 2407119486.4005165
[2024-10-05 18:50:29] 2024-10-05 16:38:55,197 | INFO     | intersect: 2407119486.4005165
[2024-10-05 18:50:29] 2024-10-05 16:38:55,198 | INFO     | chi2: 0.8628522147243974
[2024-10-05 18:50:29] 2024-10-05 16:38:55,198 | INFO     | current chi2=0.8628522147243974 (change=30.443688085593017 %)
[2024-10-05 18:50:29] 2024-10-05 16:38:55,198 | INFO     | model: linear, x: [1728123882.0, 1728123943.0, 1728124004.0, 1728124065.0, 1728124126.0, 1728124187.0, 1728124248.0, 1728124309.0, 1728124370.0, 1728124431.0, 1728
[2024-10-05 18:50:29] 2024-10-05 16:38:55,198 | INFO     | sum of square deviations: 15327572968.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,202 | INFO     | sum of deviations: -35002205528.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,203 | INFO     | mean x: 1728135045.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,203 | INFO     | mean y: 2556558.2261580382
[2024-10-05 18:50:29] 2024-10-05 16:38:55,203 | INFO     | -- intersect: 3948943775.0095277
[2024-10-05 18:50:29] 2024-10-05 16:38:55,203 | INFO     | intersect: 3948943775.0095277
[2024-10-05 18:50:29] 2024-10-05 16:38:55,203 | INFO     | chi2: 0.8022588044729507
[2024-10-05 18:50:29] 2024-10-05 16:38:55,204 | INFO     | current chi2=0.8022588044729507 (change=7.022455203502117 %)
[2024-10-05 18:50:29] 2024-10-05 16:38:55,204 | INFO     | left removable region: 40
[2024-10-05 18:50:29] 2024-10-05 16:38:55,204 | INFO     | model: linear, x: [1728125102.0, 1728125163.0, 1728125224.0, 1728125285.0, 1728125346.0, 1728125407.0, 1728125468.0, 1728125529.0, 1728125590.0, 1728125651.0, 1728
[2024-10-05 18:50:29] 2024-10-05 16:38:55,204 | INFO     | sum of square deviations: 12295263090.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,212 | INFO     | sum of deviations: -6584440650.000003
[2024-10-05 18:50:29] 2024-10-05 16:38:55,213 | INFO     | mean x: 1728135472.0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,213 | INFO     | mean y: 2561720.9413489737
[2024-10-05 18:50:29] 2024-10-05 16:38:55,213 | INFO     | -- intersect: 928024264.300699
[2024-10-05 18:50:29] 2024-10-05 16:38:55,213 | INFO     | intersect: 928024264.300699
[2024-10-05 18:50:29] 2024-10-05 16:38:55,213 | INFO     | chi2: 0.017337300673446205
[2024-10-05 18:50:29] 2024-10-05 16:38:55,213 | INFO     | -- intersect: 928024264.300699
[2024-10-05 18:50:29] 2024-10-05 16:38:55,214 | INFO     | current memory leak: -0.54 B/s (using 341 data points, chi2=0.02)
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | ..............................
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | . Timing measurements:
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | . get job = 0 s
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | . initial setup = 2 s
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | . payload setup = 11 s
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | . stage-in = 0 s
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | . payload execution = 23592 s
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | . stage-out = 5 s
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | . log creation = 2 s
[2024-10-05 18:50:29] 2024-10-05 16:38:55,215 | INFO     | ..............................
[2024-10-05 18:50:29] 2024-10-05 16:38:55,441 | INFO     | 
[2024-10-05 18:50:29] 2024-10-05 16:38:55,441 | INFO     | job summary report
[2024-10-05 18:50:29] 2024-10-05 16:38:55,441 | INFO     | --------------------------------------------------
[2024-10-05 18:50:29] 2024-10-05 16:38:55,441 | INFO     | PanDA job id: 6355180425
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | task id: 41481181
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | errors: (none)
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | pilot state: finished 
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | transexitcode: 0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | exeerrorcode: 0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | exeerrordiag: 
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | exitcode: 0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | exitmsg: OK
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | cpuconsumptiontime: 88485 s
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | nevents: 400
[2024-10-05 18:50:29] 2024-10-05 16:38:55,442 | INFO     | neventsw: 0
[2024-10-05 18:50:29] 2024-10-05 16:38:55,443 | INFO     | pid: 21713
[2024-10-05 18:50:29] 2024-10-05 16:38:55,443 | INFO     | pgrp: 21713
[2024-10-05 18:50:29] 2024-10-05 16:38:55,443 | INFO     | corecount: 8
[2024-10-05 18:50:29] 2024-10-05 16:38:55,443 | INFO     | event service: False
[2024-10-05 18:50:29] 2024-10-05 16:38:55,443 | INFO     | sizes: {0: 2435264, 1: 2435463, 10: 2435669, 12: 2435697, 23608: 2470102, 23614: 2479126, 23616: 2479310, 23702: 2479480}
[2024-10-05 18:50:29] 2024-10-05 16:38:55,443 | INFO     | --------------------------------------------------
[2024-10-05 18:50:29] 2024-10-05 16:38:55,443 | INFO     | 
[2024-10-05 18:50:29] 2024-10-05 16:38:55,443 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-05 18:50:29] 2024-10-05 16:38:56,149 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,150 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,150 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,150 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,151 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,151 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,152 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 18:50:29] 2024-10-05 16:38:56,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,152 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 18:50:29] 2024-10-05 16:38:56,152 | INFO     | job 6355180425 has completed (purged errors)
[2024-10-05 18:50:29] 2024-10-05 16:38:56,152 | INFO     | overall cleanup function is called
[2024-10-05 18:50:29] 2024-10-05 16:38:57,161 | INFO     | --- collectZombieJob: --- 10, [21713]
[2024-10-05 18:50:29] 2024-10-05 16:38:57,161 | INFO     | zombie collector waiting for pid 21713
[2024-10-05 18:50:29] 2024-10-05 16:38:57,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 18:50:29] 2024-10-05 16:38:57,162 | INFO     | collected zombie processes
[2024-10-05 18:50:29] 2024-10-05 16:38:57,162 | INFO     | will  attempt to kill all subprocesses of pid=21713
[2024-10-05 18:50:29] 2024-10-05 16:38:58,025 | INFO     | process IDs to be killed: [21713] (in reverse order)
[2024-10-05 18:50:29] 2024-10-05 16:38:58,880 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 18:50:29] 2024-10-05 16:38:58,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 18:50:29] 2024-10-05 16:38:58,883 | INFO     | did not find any defunct processes belonging to 21713
[2024-10-05 18:50:29] 2024-10-05 16:38:58,886 | INFO     | did not find any defunct processes belonging to 21713
[2024-10-05 18:50:29] 2024-10-05 16:38:58,887 | INFO     | ready for new job
[2024-10-05 18:50:29] 2024-10-05 16:38:58,887 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 18:50:29] 2024-10-05 16:38:58,890 | INFO     | *************************************
[2024-10-05 18:50:29] 2024-10-05 16:38:58,890 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 18:50:29] 2024-10-05 16:38:58,890 | INFO     | *************************************
[2024-10-05 18:50:29] 2024-10-05 16:38:58,890 | INFO     | 
[2024-10-05 18:50:29] 2024-10-05 16:38:58,891 | INFO     | pilot is running in a VM
[2024-10-05 18:50:29] 2024-10-05 16:38:58,891 | INFO     | architecture information:
[2024-10-05 18:50:29] 2024-10-05 16:38:58,901 | INFO     | executing command: cat /etc/os-release
[2024-10-05 18:50:29] 2024-10-05 16:38:59,198 | INFO     | cat /etc/os-release:
[2024-10-05 18:50:29] NAME="CentOS Linux"
[2024-10-05 18:50:29] VERSION="7 (Core)"
[2024-10-05 18:50:29] ID="centos"
[2024-10-05 18:50:29] ID_LIKE="rhel fedora"
[2024-10-05 18:50:29] VERSION_ID="7"
[2024-10-05 18:50:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 18:50:29] ANSI_COLOR="0;31"
[2024-10-05 18:50:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 18:50:29] HOME_URL="https://www.centos.org/"
[2024-10-05 18:50:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 18:50:29] 
[2024-10-05 18:50:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 18:50:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 18:50:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 18:50:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 18:50:29] 
[2024-10-05 18:50:29] 2024-10-05 16:38:59,198 | INFO     | *************************************
[2024-10-05 18:50:29] 2024-10-05 16:38:59,701 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-05 18:50:29] 2024-10-05 16:39:00,055 | INFO     | sufficient remaining disk space (485459230720 B)
[2024-10-05 18:50:29] 2024-10-05 16:39:00,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 18:50:29] 2024-10-05 16:39:00,055 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 18:50:29] 2024-10-05 16:39:00,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 18:50:29] 2024-10-05 16:39:00,056 | INFO     | aborting loop
[2024-10-05 18:50:29] 2024-10-05 16:39:00,059 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-05 18:50:29] 2024-10-05 16:39:00,060 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 18:50:29] 2024-10-05 16:39:00,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 18:50:29] 2024-10-05 16:39:00,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 18:50:29] 2024-10-05 16:39:00,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 18:50:29] 2024-10-05 16:39:00,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 18:50:29] 2024-10-05 16:39:00,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 18:50:29] 2024-10-05 16:39:01,061 | INFO     | [job] retrieve thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:01,062 | INFO     | [job] job monitor thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:01,073 | INFO     | all data control threads have been joined
[2024-10-05 18:50:29] 2024-10-05 16:39:01,165 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:01,211 | INFO     | [payload] failed_post thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:01,370 | INFO     | all job control threads have been joined
[2024-10-05 18:50:29] 2024-10-05 16:39:01,408 | INFO     | [job] validate thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:01,418 | INFO     | [job] queue monitor thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:01,526 | INFO     | all payload control threads have been joined
[2024-10-05 18:50:29] 2024-10-05 16:39:01,776 | INFO     | [payload] validate_post thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:01,944 | INFO     | [data] copytool_in thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:02,070 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:02,079 | INFO     | [data] control thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:02,376 | INFO     | [job] control thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:02,457 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:02,485 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:02,532 | INFO     | [payload] control thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:02,736 | INFO     | [data] copytool_out thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:04,646 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 18:50:29] 2024-10-05 16:39:05,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483166078784)>', '<ExcThread(monitor, started 140482717927168)>']
[2024-10-05 18:50:29] 2024-10-05 16:39:06,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 18:50:29] 2024-10-05 16:39:06,096 | INFO     | [monitor] control thread has ended
[2024-10-05 18:50:29] 2024-10-05 16:39:10,324 | INFO     | all workflow threads have been joined
[2024-10-05 18:50:29] 2024-10-05 16:39:10,324 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 18:50:29] 2024-10-05 16:39:10,325 | INFO     | traces error code: 0
[2024-10-05 18:50:29] 2024-10-05 16:39:10,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 18:50:29] 2024-10-05 16:39:10,520 [wrapper] ==== pilot stdout END ====
[2024-10-05 18:50:29] 2024-10-05 16:39:10,524 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 18:50:29] 2024-10-05 16:39:10,530 [wrapper] pilotpid: 12741
[2024-10-05 18:50:29] 2024-10-05 16:39:10,533 [wrapper] Pilot exit status: 0
[2024-10-05 18:50:29] 2024-10-05 16:39:10,923 [wrapper] pandaids: 6355180425
[2024-10-05 18:50:29] 2024-10-05 16:39:11,630 [wrapper] cleanup supervisor_pilot 15017 12742
[2024-10-05 18:50:29] 2024-10-05 16:39:11,764 [wrapper] Test setup, not cleaning
[2024-10-05 18:50:29] 2024-10-05 16:39:11,846 [wrapper] ==== wrapper stdout END ====
[2024-10-05 18:50:29] 2024-10-05 16:39:11,939 [wrapper] ==== wrapper stderr END ====
[2024-10-05 18:50:29] 2024-10-05 16:39:12,129 [wrapper] apfmon messages muted
[2024-10-05 18:50:29]  *** Error codes and diagnostics ***
[2024-10-05 18:50:29]     "exeErrorCode": 0,
[2024-10-05 18:50:29]     "exeErrorDiag": "",
[2024-10-05 18:50:29]     "pilotErrorCode": 0,
[2024-10-05 18:50:29]     "pilotErrorDiag": "",
[2024-10-05 18:50:29]  *** Listing of results directory ***
[2024-10-05 18:50:29] total 889116
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc    484599 Oct  3 14:10 pilot3.tar.gz
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc      5653 Oct  3 14:19 queuedata.json
[2024-10-05 18:50:29] -rwx------. 1 boinc boinc     33814 Oct  3 14:19 runpilot2-wrapper.sh
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc       100 Oct  5 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 18:50:29] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 11:53 run_atlas
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc       105 Oct  5 11:53 job.xml
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc      6347 Oct  5 11:53 init_data.xml
[2024-10-05 18:50:29] -rw-r--r--. 2 boinc boinc 638747457 Oct  5 11:53 EVNT.41466530._000127.pool.root.1
[2024-10-05 18:50:29] -rw-r--r--. 2 boinc boinc     17537 Oct  5 11:53 start_atlas.sh
[2024-10-05 18:50:29] drwxrwx--x. 2 boinc boinc        68 Oct  5 11:53 shared
[2024-10-05 18:50:29] -rw-r--r--. 2 boinc boinc    498169 Oct  5 11:53 input.tar.gz
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc         0 Oct  5 11:53 boinc_lockfile
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc      2535 Oct  5 12:03 pandaJob.out
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc       424 Oct  5 12:03 setup.sh.local
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc   1024464 Oct  5 12:03 agis_schedconf.cvmfs.json
[2024-10-05 18:50:29] drwx------. 4 boinc boinc      4096 Oct  5 12:03 pilot3
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc 262365356 Oct  5 18:36 HITS.41481181._008112.pool.root.1
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc       532 Oct  5 18:36 boinc_task_state.xml
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc      1016 Oct  5 18:37 memory_monitor_summary.json
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc   1615815 Oct  5 18:37 agis_ddmendpoints.agis.ALL.json
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc    507179 Oct  5 18:37 log.41481181._008112.job.log.tgz.1
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc        95 Oct  5 18:38 pilot_heartbeat.json
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc      7689 Oct  5 18:38 heartbeat.json
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc      4397 Oct  5 18:39 pilotlog.txt
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc   2235003 Oct  5 18:39 log.41481181._008112.job.log.1
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc       357 Oct  5 18:39 output.list
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc       620 Oct  5 18:39 runtime_log
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc   2764800 Oct  5 18:39 result.tar.gz
[2024-10-05 18:50:29] -rw-------. 1 boinc boinc       646 Oct  5 18:39 ZpLKDmuyZG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmNEqKDmJEwKRn.diag
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc     10999 Oct  5 18:39 runtime_log.err
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc      8192 Oct  5 18:50 boinc_mmap_file
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc        28 Oct  5 18:50 wrapper_checkpoint.txt
[2024-10-05 18:50:29] -rw-r--r--. 1 boinc boinc     21527 Oct  5 18:50 stderr.txt
[2024-10-05 18:50:30] HITS file was successfully produced:
[2024-10-05 18:50:30] -rw-------. 1 boinc boinc 262365356 Oct  5 18:36 shared/HITS.pool.root.1
[2024-10-05 18:50:30]  *** Contents of shared directory: ***
[2024-10-05 18:50:30] total 883208
[2024-10-05 18:50:30] -rw-r--r--. 2 boinc boinc 638747457 Oct  5 11:53 ATLAS.root_0
[2024-10-05 18:50:30] -rw-r--r--. 2 boinc boinc     17537 Oct  5 11:53 start_atlas.sh
[2024-10-05 18:50:30] -rw-r--r--. 2 boinc boinc    498169 Oct  5 11:53 input.tar.gz
[2024-10-05 18:50:30] -rw-------. 1 boinc boinc 262365356 Oct  5 18:36 HITS.pool.root.1
[2024-10-05 18:50:30] -rw-------. 1 boinc boinc   2764800 Oct  5 18:39 result.tar.gz
18:50:31 (2266): run_atlas exited; CPU time 88395.972738
18:50:31 (2266): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN