Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:41:34 (6996): wrapper (7.7.26015): starting
02:41:34 (6996): wrapper: running run_atlas (--nthreads 8)
[2024-10-05 02:41:34] Arguments: --nthreads 8
[2024-10-05 02:41:34] Threads: 8
[2024-10-05 02:41:34] Checking for CVMFS
[2024-10-05 02:41:34] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-05 02:41:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-05 02:41:35] Running cvmfs_config stat atlas.cern.ch
[2024-10-05 02:41:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-05 02:41:35] 2.11.2.0 10283 86898 86628 137987 3 151 24417225 25165824 3919 130560 0 62282332 99.932 31561291 9200 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-05 02:41:35] CVMFS is ok
[2024-10-05 02:41:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-05 02:41:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-05 02:41:35] Further information can be found at the LHC@home message board.
[2024-10-05 02:41:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-05 02:41:35] Checking for apptainer binary...
[2024-10-05 02:41:35] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-05 02:41:35] Running /usr/bin/apptainer --version
[2024-10-05 02:41:35] apptainer version 1.3.2-1.el7
[2024-10-05 02:41:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-05 02:41:37] cg-vwn500.simple-grid.lan
[2024-10-05 02:41:37] apptainer works
[2024-10-05 02:41:37] Set ATHENA_PROC_NUMBER=8
[2024-10-05 02:41:37] Set ATHENA_CORE_NUMBER=8
[2024-10-05 02:41:37] Starting ATLAS job with PandaID=6355177592
[2024-10-05 02:41:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 09:22:49]  *** The last 200 lines of the pilot log: ***
[2024-10-05 09:22:49] 2024-10-05 06:35:23,689 | INFO     | model: linear, x: [1728088961.0, 1728089022.0, 1728089083.0, 1728089144.0, 1728089205.0, 1728089266.0, 1728089327.0, 1728089388.0, 1728089449.0, 1728089510.0, 1728
[2024-10-05 09:22:49] 2024-10-05 06:35:23,689 | INFO     | sum of square deviations: 12295263090.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,693 | INFO     | sum of deviations: 159631440399.00003
[2024-10-05 09:22:49] 2024-10-05 06:35:23,693 | INFO     | mean x: 1728099331.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,693 | INFO     | mean y: 2504186.5630498533
[2024-10-05 09:22:49] 2024-10-05 06:35:23,693 | INFO     | -- intersect: -22433696107.8772
[2024-10-05 09:22:49] 2024-10-05 06:35:23,693 | INFO     | intersect: -22433696107.8772
[2024-10-05 09:22:49] 2024-10-05 06:35:23,694 | INFO     | chi2: 4.265662807526194
[2024-10-05 09:22:49] 2024-10-05 06:35:23,694 | INFO     | current chi2=4.265662807526194 (change=15.054374664882356 %)
[2024-10-05 09:22:49] 2024-10-05 06:35:23,694 | INFO     | right removable region: 340
[2024-10-05 09:22:49] 2024-10-05 06:35:23,694 | INFO     | model: linear, x: [1728089266.0, 1728089327.0, 1728089388.0, 1728089449.0, 1728089510.0, 1728089571.0, 1728089632.0, 1728089693.0, 1728089754.0, 1728089815.0, 1728
[2024-10-05 09:22:49] 2024-10-05 06:35:23,694 | INFO     | sum of square deviations: 12295263090.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,696 | INFO     | sum of deviations: 49639379642.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,696 | INFO     | mean x: 1728099636.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,696 | INFO     | mean y: 2523021.1085043987
[2024-10-05 09:22:49] 2024-10-05 06:35:23,696 | INFO     | -- intersect: -6974293437.611616
[2024-10-05 09:22:49] 2024-10-05 06:35:23,696 | INFO     | intersect: -6974293437.611616
[2024-10-05 09:22:49] 2024-10-05 06:35:23,697 | INFO     | chi2: 2.476217814202977
[2024-10-05 09:22:49] 2024-10-05 06:35:23,697 | INFO     | current chi2=2.476217814202977 (change=50.68905345206698 %)
[2024-10-05 09:22:49] 2024-10-05 06:35:23,697 | INFO     | model: linear, x: [1728089571.0, 1728089632.0, 1728089693.0, 1728089754.0, 1728089815.0, 1728089876.0, 1728089937.0, 1728089998.0, 1728090059.0, 1728090120.0, 1728
[2024-10-05 09:22:49] 2024-10-05 06:35:23,697 | INFO     | sum of square deviations: 11762304260.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,699 | INFO     | sum of deviations: -15474349673.500004
[2024-10-05 09:22:49] 2024-10-05 06:35:23,699 | INFO     | mean x: 1728099788.5
[2024-10-05 09:22:49] 2024-10-05 06:35:23,699 | INFO     | mean y: 2541652.473214286
[2024-10-05 09:22:49] 2024-10-05 06:35:23,699 | INFO     | -- intersect: 2276009487.248507
[2024-10-05 09:22:49] 2024-10-05 06:35:23,699 | INFO     | intersect: 2276009487.248507
[2024-10-05 09:22:49] 2024-10-05 06:35:23,700 | INFO     | chi2: 1.213161863123788
[2024-10-05 09:22:49] 2024-10-05 06:35:23,700 | INFO     | current chi2=1.213161863123788 (change=51.007465653247884 %)
[2024-10-05 09:22:49] 2024-10-05 06:35:23,700 | INFO     | model: linear, x: [1728089876.0, 1728089937.0, 1728089998.0, 1728090059.0, 1728090120.0, 1728090181.0, 1728090242.0, 1728090303.0, 1728090364.0, 1728090425.0, 1728
[2024-10-05 09:22:49] 2024-10-05 06:35:23,700 | INFO     | sum of square deviations: 11244973630.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,702 | INFO     | sum of deviations: -39981500413.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,702 | INFO     | mean x: 1728099941.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,702 | INFO     | mean y: 2548828.589123867
[2024-10-05 09:22:49] 2024-10-05 06:35:23,702 | INFO     | -- intersect: 6146807657.304294
[2024-10-05 09:22:49] 2024-10-05 06:35:23,702 | INFO     | intersect: 6146807657.304294
[2024-10-05 09:22:49] 2024-10-05 06:35:23,703 | INFO     | chi2: 0.8904744581242456
[2024-10-05 09:22:49] 2024-10-05 06:35:23,703 | INFO     | current chi2=0.8904744581242456 (change=26.598874792243294 %)
[2024-10-05 09:22:49] 2024-10-05 06:35:23,703 | INFO     | model: linear, x: [1728090181.0, 1728090242.0, 1728090303.0, 1728090364.0, 1728090425.0, 1728090486.0, 1728090547.0, 1728090608.0, 1728090669.0, 1728090730.0, 1728
[2024-10-05 09:22:49] 2024-10-05 06:35:23,703 | INFO     | sum of square deviations: 10743038637.5
[2024-10-05 09:22:49] 2024-10-05 06:35:23,705 | INFO     | sum of deviations: -34045559943.5
[2024-10-05 09:22:49] 2024-10-05 06:35:23,705 | INFO     | mean x: 1728100093.5
[2024-10-05 09:22:49] 2024-10-05 06:35:23,705 | INFO     | mean y: 2547012.5674846624
[2024-10-05 09:22:49] 2024-10-05 06:35:23,705 | INFO     | -- intersect: 5479036235.668095
[2024-10-05 09:22:49] 2024-10-05 06:35:23,705 | INFO     | intersect: 5479036235.668095
[2024-10-05 09:22:49] 2024-10-05 06:35:23,705 | INFO     | chi2: 0.8725507167830011
[2024-10-05 09:22:49] 2024-10-05 06:35:23,705 | INFO     | current chi2=0.8725507167830011 (change=2.012830483537987 %)
[2024-10-05 09:22:49] 2024-10-05 06:35:23,706 | INFO     | left removable region: 40
[2024-10-05 09:22:49] 2024-10-05 06:35:23,706 | INFO     | model: linear, x: [1728091401.0, 1728091462.0, 1728091523.0, 1728091584.0, 1728091645.0, 1728091706.0, 1728091767.0, 1728091828.0, 1728091889.0, 1728091950.0, 1728
[2024-10-05 09:22:49] 2024-10-05 06:35:23,706 | INFO     | sum of square deviations: 8372156975.0
[2024-10-05 09:22:49] 2024-10-05 06:35:23,707 | INFO     | sum of deviations: 7709909224.500001
[2024-10-05 09:22:49] 2024-10-05 06:35:23,708 | INFO     | mean x: 1728100520.5
[2024-10-05 09:22:49] 2024-10-05 06:35:23,708 | INFO     | mean y: 2547585.5833333335
[2024-10-05 09:22:49] 2024-10-05 06:35:23,708 | INFO     | -- intersect: -1588858092.0277467
[2024-10-05 09:22:49] 2024-10-05 06:35:23,708 | INFO     | intersect: -1588858092.0277467
[2024-10-05 09:22:49] 2024-10-05 06:35:23,708 | INFO     | chi2: 0.0012671799396988099
[2024-10-05 09:22:49] 2024-10-05 06:35:23,708 | INFO     | -- intersect: -1588858092.0277467
[2024-10-05 09:22:49] 2024-10-05 06:35:23,708 | INFO     | current memory leak: 0.92 B/s (using 300 data points, chi2=0.00)
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | ..............................
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | . Timing measurements:
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | . get job = 0 s
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | . initial setup = 2 s
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | . payload setup = 9 s
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | . stage-in = 0 s
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | . payload execution = 21077 s
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | . stage-out = 3 s
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | . log creation = 1 s
[2024-10-05 09:22:49] 2024-10-05 06:35:23,709 | INFO     | ..............................
[2024-10-05 09:22:49] 2024-10-05 06:35:24,224 | INFO     | 
[2024-10-05 09:22:49] 2024-10-05 06:35:24,224 | INFO     | job summary report
[2024-10-05 09:22:49] 2024-10-05 06:35:24,224 | INFO     | --------------------------------------------------
[2024-10-05 09:22:49] 2024-10-05 06:35:24,224 | INFO     | PanDA job id: 6355177592
[2024-10-05 09:22:49] 2024-10-05 06:35:24,224 | INFO     | task id: 41481139
[2024-10-05 09:22:49] 2024-10-05 06:35:24,225 | INFO     | errors: (none)
[2024-10-05 09:22:49] 2024-10-05 06:35:24,225 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 09:22:49] 2024-10-05 06:35:24,225 | INFO     | pilot state: finished 
[2024-10-05 09:22:49] 2024-10-05 06:35:24,230 | INFO     | transexitcode: 0
[2024-10-05 09:22:49] 2024-10-05 06:35:24,230 | INFO     | exeerrorcode: 0
[2024-10-05 09:22:49] 2024-10-05 06:35:24,230 | INFO     | exeerrordiag: 
[2024-10-05 09:22:49] 2024-10-05 06:35:24,230 | INFO     | exitcode: 0
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | exitmsg: OK
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | cpuconsumptiontime: 78349 s
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | nevents: 400
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | neventsw: 0
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | pid: 20181
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | pgrp: 20181
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | corecount: 8
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | event service: False
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | sizes: {0: 2435213, 1: 2435412, 8: 2435618, 12: 2435646, 21090: 2468834, 21091: 2468833, 21094: 2478041, 21095: 2478097, 21188: 2478267}
[2024-10-05 09:22:49] 2024-10-05 06:35:24,231 | INFO     | --------------------------------------------------
[2024-10-05 09:22:49] 2024-10-05 06:35:24,232 | INFO     | 
[2024-10-05 09:22:49] 2024-10-05 06:35:24,232 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-05 09:22:49] 2024-10-05 06:35:24,598 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 09:22:49] 2024-10-05 06:35:24,600 | INFO     | job 6355177592 has completed (purged errors)
[2024-10-05 09:22:49] 2024-10-05 06:35:24,601 | INFO     | overall cleanup function is called
[2024-10-05 09:22:49] 2024-10-05 06:35:25,610 | INFO     | --- collectZombieJob: --- 10, [20181]
[2024-10-05 09:22:49] 2024-10-05 06:35:25,610 | INFO     | zombie collector waiting for pid 20181
[2024-10-05 09:22:49] 2024-10-05 06:35:25,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 09:22:49] 2024-10-05 06:35:25,610 | INFO     | collected zombie processes
[2024-10-05 09:22:49] 2024-10-05 06:35:25,610 | INFO     | will  attempt to kill all subprocesses of pid=20181
[2024-10-05 09:22:49] 2024-10-05 06:35:26,227 | INFO     | process IDs to be killed: [20181] (in reverse order)
[2024-10-05 09:22:49] 2024-10-05 06:35:26,280 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 09:22:49] 2024-10-05 06:35:26,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 09:22:49] 2024-10-05 06:35:26,283 | INFO     | did not find any defunct processes belonging to 20181
[2024-10-05 09:22:49] 2024-10-05 06:35:26,286 | INFO     | did not find any defunct processes belonging to 20181
[2024-10-05 09:22:49] 2024-10-05 06:35:26,286 | INFO     | ready for new job
[2024-10-05 09:22:49] 2024-10-05 06:35:26,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 09:22:49] 2024-10-05 06:35:26,289 | INFO     | *************************************
[2024-10-05 09:22:49] 2024-10-05 06:35:26,289 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 09:22:49] 2024-10-05 06:35:26,289 | INFO     | *************************************
[2024-10-05 09:22:49] 2024-10-05 06:35:26,289 | INFO     | 
[2024-10-05 09:22:49] 2024-10-05 06:35:26,290 | INFO     | pilot is running in a VM
[2024-10-05 09:22:49] 2024-10-05 06:35:26,290 | INFO     | architecture information:
[2024-10-05 09:22:49] 2024-10-05 06:35:26,291 | INFO     | executing command: cat /etc/os-release
[2024-10-05 09:22:49] 2024-10-05 06:35:26,479 | INFO     | cat /etc/os-release:
[2024-10-05 09:22:49] NAME="CentOS Linux"
[2024-10-05 09:22:49] VERSION="7 (Core)"
[2024-10-05 09:22:49] ID="centos"
[2024-10-05 09:22:49] ID_LIKE="rhel fedora"
[2024-10-05 09:22:49] VERSION_ID="7"
[2024-10-05 09:22:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 09:22:49] ANSI_COLOR="0;31"
[2024-10-05 09:22:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 09:22:49] HOME_URL="https://www.centos.org/"
[2024-10-05 09:22:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 09:22:49] 
[2024-10-05 09:22:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 09:22:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 09:22:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 09:22:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 09:22:49] 
[2024-10-05 09:22:49] 2024-10-05 06:35:26,479 | INFO     | *************************************
[2024-10-05 09:22:49] 2024-10-05 06:35:26,982 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-05 09:22:49] 2024-10-05 06:35:27,088 | INFO     | sufficient remaining disk space (487878295552 B)
[2024-10-05 09:22:49] 2024-10-05 06:35:27,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 09:22:49] 2024-10-05 06:35:27,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 09:22:49] 2024-10-05 06:35:27,189 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 09:22:49] 2024-10-05 06:35:27,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 09:22:49] 2024-10-05 06:35:27,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 09:22:49] 2024-10-05 06:35:27,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 09:22:49] 2024-10-05 06:35:27,374 | INFO     | all data control threads have been joined
[2024-10-05 09:22:49] 2024-10-05 06:35:27,404 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-05 09:22:49] 2024-10-05 06:35:27,404 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-05 09:22:49] 2024-10-05 06:35:27,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 09:22:49] 2024-10-05 06:35:27,405 | INFO     | will abort loop
[2024-10-05 09:22:49] 2024-10-05 06:35:27,411 | INFO     | all payload control threads have been joined
[2024-10-05 09:22:49] 2024-10-05 06:35:27,585 | INFO     | all job control threads have been joined
[2024-10-05 09:22:49] 2024-10-05 06:35:27,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 09:22:49] 2024-10-05 06:35:28,094 | INFO     | [job] retrieve thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:28,380 | INFO     | [data] control thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:28,381 | INFO     | [payload] validate_post thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:28,410 | INFO     | [job] job monitor thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:28,417 | INFO     | [payload] control thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:28,591 | INFO     | [job] control thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:28,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 09:22:49] 2024-10-05 06:35:28,940 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:29,140 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:29,240 | INFO     | [job] validate thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:29,248 | INFO     | [payload] failed_post thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:29,316 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:29,317 | INFO     | [data] copytool_in thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:29,569 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:29,661 | INFO     | [data] copytool_out thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:29,890 | INFO     | [job] queue monitor thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:31,256 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 09:22:49] 2024-10-05 06:35:31,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904577414976)>', '<ExcThread(monitor, started 139903878797056)>']
[2024-10-05 09:22:49] 2024-10-05 06:35:32,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 09:22:49] 2024-10-05 06:35:32,219 | INFO     | [monitor] control thread has ended
[2024-10-05 09:22:49] 2024-10-05 06:35:36,663 | INFO     | all workflow threads have been joined
[2024-10-05 09:22:49] 2024-10-05 06:35:36,663 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 09:22:49] 2024-10-05 06:35:36,663 | INFO     | traces error code: 0
[2024-10-05 09:22:49] 2024-10-05 06:35:36,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 09:22:49] 2024-10-05 06:35:36,903 [wrapper] ==== pilot stdout END ====
[2024-10-05 09:22:49] 2024-10-05 06:35:36,946 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 09:22:49] 2024-10-05 06:35:36,989 [wrapper] pilotpid: 12672
[2024-10-05 09:22:49] 2024-10-05 06:35:37,038 [wrapper] Pilot exit status: 0
[2024-10-05 09:22:49] 2024-10-05 06:35:37,379 [wrapper] pandaids: 6355177592
[2024-10-05 09:22:49] 2024-10-05 06:35:38,144 [wrapper] cleanup supervisor_pilot 15315 12673
[2024-10-05 09:22:49] 2024-10-05 06:35:38,208 [wrapper] Test setup, not cleaning
[2024-10-05 09:22:49] 2024-10-05 06:35:38,306 [wrapper] ==== wrapper stdout END ====
[2024-10-05 09:22:49] 2024-10-05 06:35:38,415 [wrapper] ==== wrapper stderr END ====
[2024-10-05 09:22:49] 2024-10-05 06:35:38,606 [wrapper] apfmon messages muted
[2024-10-05 09:22:49]  *** Error codes and diagnostics ***
[2024-10-05 09:22:49]     "exeErrorCode": 0,
[2024-10-05 09:22:49]     "exeErrorDiag": "",
[2024-10-05 09:22:49]     "pilotErrorCode": 0,
[2024-10-05 09:22:49]     "pilotErrorDiag": "",
[2024-10-05 09:22:49]  *** Listing of results directory ***
[2024-10-05 09:22:49] total 816132
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc    484599 Oct  3 12:01 pilot3.tar.gz
[2024-10-05 09:22:49] -rwx------. 1 boinc boinc     33814 Oct  3 12:21 runpilot2-wrapper.sh
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc      5653 Oct  3 12:21 queuedata.json
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc       100 Oct  5 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 09:22:49] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 02:41 run_atlas
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc       105 Oct  5 02:41 job.xml
[2024-10-05 09:22:49] -rw-r--r--. 2 boinc boinc     17537 Oct  5 02:41 start_atlas.sh
[2024-10-05 09:22:49] drwxrwx--x. 2 boinc boinc        68 Oct  5 02:41 shared
[2024-10-05 09:22:49] -rw-r--r--. 2 boinc boinc    498157 Oct  5 02:41 input.tar.gz
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc      6363 Oct  5 02:41 init_data.xml
[2024-10-05 09:22:49] -rw-r--r--. 2 boinc boinc 599289216 Oct  5 02:41 EVNT.41481137._000037.pool.root.1
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc         0 Oct  5 02:41 boinc_lockfile
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc      2532 Oct  5 02:41 pandaJob.out
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc       424 Oct  5 02:41 setup.sh.local
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc   1024498 Oct  5 02:41 agis_schedconf.cvmfs.json
[2024-10-05 09:22:49] drwx------. 4 boinc boinc      4096 Oct  5 02:41 pilot3
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc 227940941 Oct  5 08:32 HITS.41481139._002063.pool.root.1
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc       532 Oct  5 08:32 boinc_task_state.xml
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc      1016 Oct  5 08:33 memory_monitor_summary.json
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc   1615815 Oct  5 08:33 agis_ddmendpoints.agis.ALL.json
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc    439944 Oct  5 08:33 log.41481139._002063.job.log.tgz.1
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc      7687 Oct  5 08:35 heartbeat.json
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc        95 Oct  5 08:35 pilot_heartbeat.json
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc      4460 Oct  5 08:35 pilotlog.txt
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc   1876088 Oct  5 08:35 log.41481139._002063.job.log.1
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc       357 Oct  5 08:35 output.list
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc       620 Oct  5 08:35 runtime_log
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc   2334720 Oct  5 08:35 result.tar.gz
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc     11047 Oct  5 08:35 runtime_log.err
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc       662 Oct  5 08:35 8xLNDmr8XG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmk1pKDm4m9Drn.diag
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc      8192 Oct  5 09:22 boinc_mmap_file
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc        28 Oct  5 09:22 wrapper_checkpoint.txt
[2024-10-05 09:22:49] -rw-r--r--. 1 boinc boinc     21543 Oct  5 09:22 stderr.txt
[2024-10-05 09:22:49] HITS file was successfully produced:
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc 227940941 Oct  5 08:32 shared/HITS.pool.root.1
[2024-10-05 09:22:49]  *** Contents of shared directory: ***
[2024-10-05 09:22:49] total 810632
[2024-10-05 09:22:49] -rw-r--r--. 2 boinc boinc     17537 Oct  5 02:41 start_atlas.sh
[2024-10-05 09:22:49] -rw-r--r--. 2 boinc boinc    498157 Oct  5 02:41 input.tar.gz
[2024-10-05 09:22:49] -rw-r--r--. 2 boinc boinc 599289216 Oct  5 02:41 ATLAS.root_0
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc 227940941 Oct  5 08:32 HITS.pool.root.1
[2024-10-05 09:22:49] -rw-------. 1 boinc boinc   2334720 Oct  5 08:35 result.tar.gz
09:22:51 (6996): run_atlas exited; CPU time 78284.976809
09:22:51 (6996): called boinc_finish(0)

</stderr_txt>
]]>

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