Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:01:31 (20487): wrapper (7.7.26015): starting
20:01:31 (20487): wrapper: running run_atlas (--nthreads 8)
[2024-10-04 20:01:31] Arguments: --nthreads 8
[2024-10-04 20:01:31] Threads: 8
[2024-10-04 20:01:31] Checking for CVMFS
[2024-10-04 20:01:32] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-04 20:01:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-04 20:01:32] Running cvmfs_config stat atlas.cern.ch
[2024-10-04 20:01:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-04 20:01:33] 2.11.2.0 12308 56054 76884 137977 2 59 16467704 25165824 4392 130560 0 38051501 99.917 22125896 8003 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-04 20:01:33] CVMFS is ok
[2024-10-04 20:01:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-04 20:01:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-04 20:01:33] Further information can be found at the LHC@home message board.
[2024-10-04 20:01:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-04 20:01:33] Checking for apptainer binary...
[2024-10-04 20:01:33] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-04 20:01:33] Running /usr/bin/apptainer --version
[2024-10-04 20:01:33] apptainer version 1.3.2-1.el7
[2024-10-04 20:01:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-04 20:31:57] cg-vwn469.simple-grid.lan
[2024-10-04 20:31:57] apptainer works
[2024-10-04 20:31:57] Set ATHENA_PROC_NUMBER=8
[2024-10-04 20:31:57] Set ATHENA_CORE_NUMBER=8
[2024-10-04 20:31:57] Starting ATLAS job with PandaID=6355177378
[2024-10-04 20:31:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 03:10:26]  *** The last 200 lines of the pilot log: ***
[2024-10-05 03:10:26] 2024-10-05 00:49:48,291 | INFO     | chi2: 8.321779592626106
[2024-10-05 03:10:26] 2024-10-05 00:49:48,292 | INFO     | model: linear, x: [1728067369.0, 1728067430.0, 1728067491.0, 1728067552.0, 1728067613.0, 1728067674.0, 1728067735.0, 1728067796.0, 1728067857.0, 1728067918.0, 1728
[2024-10-05 03:10:26] 2024-10-05 00:49:48,300 | INFO     | sum of square deviations: 13872669410.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,304 | INFO     | sum of deviations: 265368217588.99997
[2024-10-05 03:10:26] 2024-10-05 00:49:48,304 | INFO     | mean x: 1728078166.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,304 | INFO     | mean y: 2465001.538028169
[2024-10-05 03:10:26] 2024-10-05 00:49:48,304 | INFO     | -- intersect: -33053683690.027164
[2024-10-05 03:10:26] 2024-10-05 00:49:48,304 | INFO     | intersect: -33053683690.027164
[2024-10-05 03:10:26] 2024-10-05 00:49:48,305 | INFO     | chi2: 7.589489377187395
[2024-10-05 03:10:26] 2024-10-05 00:49:48,305 | INFO     | current chi2=7.589489377187395 (change=8.799682895802606 %)
[2024-10-05 03:10:26] 2024-10-05 00:49:48,305 | INFO     | right removable region: 354
[2024-10-05 03:10:26] 2024-10-05 00:49:48,305 | INFO     | model: linear, x: [1728067674.0, 1728067735.0, 1728067796.0, 1728067857.0, 1728067918.0, 1728067979.0, 1728068040.0, 1728068101.0, 1728068162.0, 1728068223.0, 1728
[2024-10-05 03:10:26] 2024-10-05 00:49:48,306 | INFO     | sum of square deviations: 13872669410.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,309 | INFO     | sum of deviations: 122889213104.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,309 | INFO     | mean x: 1728078471.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,309 | INFO     | mean y: 2491182.332394366
[2024-10-05 03:10:26] 2024-10-05 00:49:48,309 | INFO     | -- intersect: -15305464136.639883
[2024-10-05 03:10:26] 2024-10-05 00:49:48,309 | INFO     | intersect: -15305464136.639883
[2024-10-05 03:10:26] 2024-10-05 00:49:48,310 | INFO     | chi2: 3.818397571386331
[2024-10-05 03:10:26] 2024-10-05 00:49:48,310 | INFO     | current chi2=3.818397571386331 (change=54.115612785878184 %)
[2024-10-05 03:10:26] 2024-10-05 00:49:48,310 | INFO     | model: linear, x: [1728067979.0, 1728068040.0, 1728068101.0, 1728068162.0, 1728068223.0, 1728068284.0, 1728068345.0, 1728068406.0, 1728068467.0, 1728068528.0, 1728
[2024-10-05 03:10:26] 2024-10-05 00:49:48,311 | INFO     | sum of square deviations: 13294714387.5
[2024-10-05 03:10:26] 2024-10-05 00:49:48,314 | INFO     | sum of deviations: 47604514924.00005
[2024-10-05 03:10:26] 2024-10-05 00:49:48,314 | INFO     | mean x: 1728078623.5
[2024-10-05 03:10:26] 2024-10-05 00:49:48,314 | INFO     | mean y: 2511033.7314285715
[2024-10-05 03:10:26] 2024-10-05 00:49:48,315 | INFO     | -- intersect: -6185237136.293049
[2024-10-05 03:10:26] 2024-10-05 00:49:48,315 | INFO     | intersect: -6185237136.293049
[2024-10-05 03:10:26] 2024-10-05 00:49:48,315 | INFO     | chi2: 2.2027701852934114
[2024-10-05 03:10:26] 2024-10-05 00:49:48,315 | INFO     | current chi2=2.2027701852934114 (change=42.31165969200897 %)
[2024-10-05 03:10:26] 2024-10-05 00:49:48,316 | INFO     | model: linear, x: [1728068284.0, 1728068345.0, 1728068406.0, 1728068467.0, 1728068528.0, 1728068589.0, 1728068650.0, 1728068711.0, 1728068772.0, 1728068833.0, 1728
[2024-10-05 03:10:26] 2024-10-05 00:49:48,316 | INFO     | sum of square deviations: 12733038740.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,319 | INFO     | sum of deviations: -18518250863.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,319 | INFO     | mean x: 1728078776.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,319 | INFO     | mean y: 2528986.637681159
[2024-10-05 03:10:26] 2024-10-05 00:49:48,320 | INFO     | -- intersect: 2515754379.1329517
[2024-10-05 03:10:26] 2024-10-05 00:49:48,320 | INFO     | intersect: 2515754379.1329517
[2024-10-05 03:10:26] 2024-10-05 00:49:48,320 | INFO     | chi2: 0.9669064761859122
[2024-10-05 03:10:26] 2024-10-05 00:49:48,320 | INFO     | current chi2=0.9669064761859122 (change=56.1049771491655 %)
[2024-10-05 03:10:26] 2024-10-05 00:49:48,321 | INFO     | model: linear, x: [1728068589.0, 1728068650.0, 1728068711.0, 1728068772.0, 1728068833.0, 1728068894.0, 1728068955.0, 1728069016.0, 1728069077.0, 1728069138.0, 1728
[2024-10-05 03:10:26] 2024-10-05 00:49:48,321 | INFO     | sum of square deviations: 12187409905.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,324 | INFO     | sum of deviations: -32774467655.0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,324 | INFO     | mean x: 1728078928.5
[2024-10-05 03:10:26] 2024-10-05 00:49:48,324 | INFO     | mean y: 2532951.5764705883
[2024-10-05 03:10:26] 2024-10-05 00:49:48,324 | INFO     | -- intersect: 4649694849.706646
[2024-10-05 03:10:26] 2024-10-05 00:49:48,324 | INFO     | intersect: 4649694849.706646
[2024-10-05 03:10:26] 2024-10-05 00:49:48,325 | INFO     | chi2: 0.8811531384690604
[2024-10-05 03:10:26] 2024-10-05 00:49:48,325 | INFO     | current chi2=0.8811531384690604 (change=8.868834766224436 %)
[2024-10-05 03:10:26] 2024-10-05 00:49:48,325 | INFO     | left removable region: 40
[2024-10-05 03:10:26] 2024-10-05 00:49:48,325 | INFO     | model: linear, x: [1728069809.0, 1728069870.0, 1728069931.0, 1728069992.0, 1728070053.0, 1728070114.0, 1728070175.0, 1728070236.0, 1728070297.0, 1728070358.0, 1728
[2024-10-05 03:10:26] 2024-10-05 00:49:48,326 | INFO     | sum of square deviations: 9599817202.5
[2024-10-05 03:10:26] 2024-10-05 00:49:48,328 | INFO     | sum of deviations: 15012606208.499998
[2024-10-05 03:10:26] 2024-10-05 00:49:48,329 | INFO     | mean x: 1728079355.5
[2024-10-05 03:10:26] 2024-10-05 00:49:48,329 | INFO     | mean y: 2531901.627388535
[2024-10-05 03:10:26] 2024-10-05 00:49:48,329 | INFO     | -- intersect: -2699912771.423663
[2024-10-05 03:10:26] 2024-10-05 00:49:48,329 | INFO     | intersect: -2699912771.423663
[2024-10-05 03:10:26] 2024-10-05 00:49:48,329 | INFO     | chi2: 0.0008016429023744063
[2024-10-05 03:10:26] 2024-10-05 00:49:48,330 | INFO     | -- intersect: -2699912771.423663
[2024-10-05 03:10:26] 2024-10-05 00:49:48,330 | INFO     | current memory leak: 1.56 B/s (using 314 data points, chi2=0.00)
[2024-10-05 03:10:26] 2024-10-05 00:49:48,330 | INFO     | ..............................
[2024-10-05 03:10:26] 2024-10-05 00:49:48,331 | INFO     | . Timing measurements:
[2024-10-05 03:10:26] 2024-10-05 00:49:48,331 | INFO     | . get job = 0 s
[2024-10-05 03:10:26] 2024-10-05 00:49:48,331 | INFO     | . initial setup = 5 s
[2024-10-05 03:10:26] 2024-10-05 00:49:48,331 | INFO     | . payload setup = 123 s
[2024-10-05 03:10:26] 2024-10-05 00:49:48,331 | INFO     | . stage-in = 0 s
[2024-10-05 03:10:26] 2024-10-05 00:49:48,331 | INFO     | . payload execution = 22077 s
[2024-10-05 03:10:26] 2024-10-05 00:49:48,331 | INFO     | . stage-out = 4 s
[2024-10-05 03:10:26] 2024-10-05 00:49:48,331 | INFO     | . log creation = 2 s
[2024-10-05 03:10:26] 2024-10-05 00:49:48,331 | INFO     | ..............................
[2024-10-05 03:10:26] 2024-10-05 00:49:48,456 | INFO     | 
[2024-10-05 03:10:26] 2024-10-05 00:49:48,456 | INFO     | job summary report
[2024-10-05 03:10:26] 2024-10-05 00:49:48,456 | INFO     | --------------------------------------------------
[2024-10-05 03:10:26] 2024-10-05 00:49:48,456 | INFO     | PanDA job id: 6355177378
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | task id: 41481139
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | errors: (none)
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | pilot state: finished 
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | transexitcode: 0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | exeerrorcode: 0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | exeerrordiag: 
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | exitcode: 0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | exitmsg: OK
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | cpuconsumptiontime: 81301 s
[2024-10-05 03:10:26] 2024-10-05 00:49:48,457 | INFO     | nevents: 400
[2024-10-05 03:10:26] 2024-10-05 00:49:48,458 | INFO     | neventsw: 0
[2024-10-05 03:10:26] 2024-10-05 00:49:48,458 | INFO     | pid: 28204
[2024-10-05 03:10:26] 2024-10-05 00:49:48,458 | INFO     | pgrp: 28204
[2024-10-05 03:10:26] 2024-10-05 00:49:48,458 | INFO     | corecount: 8
[2024-10-05 03:10:26] 2024-10-05 00:49:48,458 | INFO     | event service: False
[2024-10-05 03:10:26] 2024-10-05 00:49:48,458 | INFO     | sizes: {0: 2435272, 1: 2435471, 12: 2435471, 22: 2435499, 33: 2435527, 44: 2435555, 54: 2435711, 65: 2435739, 76: 2435767, 87: 2435823, 92: 2436057, 97: 2436365, 2
[2024-10-05 03:10:26] 2024-10-05 00:49:48,458 | INFO     | --------------------------------------------------
[2024-10-05 03:10:26] 2024-10-05 00:49:48,458 | INFO     | 
[2024-10-05 03:10:26] 2024-10-05 00:49:48,458 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2024-10-05 03:10:26] 2024-10-05 00:49:49,023 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,023 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,023 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,023 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 03:10:26] 2024-10-05 00:49:49,024 | INFO     | job 6355177378 has completed (purged errors)
[2024-10-05 03:10:26] 2024-10-05 00:49:49,025 | INFO     | overall cleanup function is called
[2024-10-05 03:10:26] 2024-10-05 00:49:50,033 | INFO     | --- collectZombieJob: --- 10, [28204]
[2024-10-05 03:10:26] 2024-10-05 00:49:50,033 | INFO     | zombie collector waiting for pid 28204
[2024-10-05 03:10:26] 2024-10-05 00:49:50,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 03:10:26] 2024-10-05 00:49:50,033 | INFO     | collected zombie processes
[2024-10-05 03:10:26] 2024-10-05 00:49:50,034 | INFO     | will  attempt to kill all subprocesses of pid=28204
[2024-10-05 03:10:26] 2024-10-05 00:49:50,460 | INFO     | process IDs to be killed: [28204] (in reverse order)
[2024-10-05 03:10:26] 2024-10-05 00:49:51,055 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 03:10:26] 2024-10-05 00:49:51,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 03:10:26] 2024-10-05 00:49:51,058 | INFO     | did not find any defunct processes belonging to 28204
[2024-10-05 03:10:26] 2024-10-05 00:49:51,061 | INFO     | did not find any defunct processes belonging to 28204
[2024-10-05 03:10:26] 2024-10-05 00:49:51,061 | INFO     | ready for new job
[2024-10-05 03:10:26] 2024-10-05 00:49:51,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 03:10:26] 2024-10-05 00:49:51,064 | INFO     | *************************************
[2024-10-05 03:10:26] 2024-10-05 00:49:51,064 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 03:10:26] 2024-10-05 00:49:51,064 | INFO     | *************************************
[2024-10-05 03:10:26] 2024-10-05 00:49:51,064 | INFO     | 
[2024-10-05 03:10:26] 2024-10-05 00:49:51,065 | INFO     | pilot is running in a VM
[2024-10-05 03:10:26] 2024-10-05 00:49:51,065 | INFO     | architecture information:
[2024-10-05 03:10:26] 2024-10-05 00:49:51,065 | INFO     | executing command: cat /etc/os-release
[2024-10-05 03:10:26] 2024-10-05 00:49:51,209 | INFO     | cat /etc/os-release:
[2024-10-05 03:10:26] NAME="CentOS Linux"
[2024-10-05 03:10:26] VERSION="7 (Core)"
[2024-10-05 03:10:26] ID="centos"
[2024-10-05 03:10:26] ID_LIKE="rhel fedora"
[2024-10-05 03:10:26] VERSION_ID="7"
[2024-10-05 03:10:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 03:10:26] ANSI_COLOR="0;31"
[2024-10-05 03:10:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 03:10:26] HOME_URL="https://www.centos.org/"
[2024-10-05 03:10:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 03:10:26] 
[2024-10-05 03:10:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 03:10:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 03:10:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 03:10:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 03:10:26] 
[2024-10-05 03:10:26] 2024-10-05 00:49:51,210 | INFO     | *************************************
[2024-10-05 03:10:26] 2024-10-05 00:49:51,248 | INFO     | 22486s have passed since pilot start
[2024-10-05 03:10:26] 2024-10-05 00:49:51,712 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2024-10-05 03:10:26] 2024-10-05 00:49:51,881 | INFO     | sufficient remaining disk space (490590961664 B)
[2024-10-05 03:10:26] 2024-10-05 00:49:51,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 03:10:26] 2024-10-05 00:49:51,882 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 03:10:26] 2024-10-05 00:49:51,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 03:10:26] 2024-10-05 00:49:51,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 03:10:26] 2024-10-05 00:49:52,254 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 03:10:26] 2024-10-05 00:49:52,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 03:10:26] 2024-10-05 00:49:52,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 03:10:26] 2024-10-05 00:49:52,598 | INFO     | all payload control threads have been joined
[2024-10-05 03:10:26] 2024-10-05 00:49:52,751 | INFO     | all job control threads have been joined
[2024-10-05 03:10:26] 2024-10-05 00:49:52,762 | INFO     | all data control threads have been joined
[2024-10-05 03:10:26] 2024-10-05 00:49:52,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 03:10:26] 2024-10-05 00:49:52,766 | INFO     | aborting loop
[2024-10-05 03:10:26] 2024-10-05 00:49:52,888 | INFO     | [job] retrieve thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,043 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,122 | INFO     | [data] copytool_in thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,167 | INFO     | [payload] validate_post thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,230 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,281 | INFO     | [job] validate thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 03:10:26] 2024-10-05 00:49:53,604 | INFO     | [payload] control thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,757 | INFO     | [job] control thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,768 | INFO     | [data] control thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,773 | INFO     | [job] job monitor thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,811 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:53,890 | INFO     | [data] copytool_out thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:54,109 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:54,275 | INFO     | [payload] failed_post thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:54,478 | INFO     | [job] queue monitor thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:55,892 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 03:10:26] 2024-10-05 00:49:56,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090479687488)>', '<ExcThread(monitor, started 140089636132608)>']
[2024-10-05 03:10:26] 2024-10-05 00:49:57,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 03:10:26] 2024-10-05 00:49:57,285 | INFO     | [monitor] control thread has ended
[2024-10-05 03:10:26] 2024-10-05 00:50:02,016 | INFO     | all workflow threads have been joined
[2024-10-05 03:10:26] 2024-10-05 00:50:02,016 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 03:10:26] 2024-10-05 00:50:02,016 | INFO     | traces error code: 0
[2024-10-05 03:10:26] 2024-10-05 00:50:02,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 03:10:26] 2024-10-05 00:50:02,362 [wrapper] ==== pilot stdout END ====
[2024-10-05 03:10:26] 2024-10-05 00:50:02,476 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 03:10:26] 2024-10-05 00:50:02,606 [wrapper] pilotpid: 16467
[2024-10-05 03:10:26] 2024-10-05 00:50:02,732 [wrapper] Pilot exit status: 0
[2024-10-05 03:10:26] 2024-10-05 00:50:03,274 [wrapper] pandaids: 6355177378
[2024-10-05 03:10:26] 2024-10-05 00:50:03,918 [wrapper] cleanup supervisor_pilot  6850 16468
[2024-10-05 03:10:26] 2024-10-05 00:50:03,994 [wrapper] Test setup, not cleaning
[2024-10-05 03:10:26] 2024-10-05 00:50:04,052 [wrapper] ==== wrapper stdout END ====
[2024-10-05 03:10:26] 2024-10-05 00:50:04,140 [wrapper] ==== wrapper stderr END ====
[2024-10-05 03:10:26] 2024-10-05 00:50:04,318 [wrapper] apfmon messages muted
[2024-10-05 03:10:26]  *** Error codes and diagnostics ***
[2024-10-05 03:10:26]     "exeErrorCode": 0,
[2024-10-05 03:10:26]     "exeErrorDiag": "",
[2024-10-05 03:10:26]     "pilotErrorCode": 0,
[2024-10-05 03:10:26]     "pilotErrorDiag": "",
[2024-10-05 03:10:26]  *** Listing of results directory ***
[2024-10-05 03:10:26] total 804396
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc    484599 Oct  3 12:01 pilot3.tar.gz
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc      5653 Oct  3 12:05 queuedata.json
[2024-10-05 03:10:26] -rwx------. 1 boinc boinc     33814 Oct  3 12:05 runpilot2-wrapper.sh
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc       100 Oct  4 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 03:10:26] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 20:01 run_atlas
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc       105 Oct  4 20:01 job.xml
[2024-10-05 03:10:26] -rw-r--r--. 2 boinc boinc 588944214 Oct  4 20:01 EVNT.41481137._000034.pool.root.1
[2024-10-05 03:10:26] -rw-r--r--. 2 boinc boinc     17537 Oct  4 20:01 start_atlas.sh
[2024-10-05 03:10:26] drwxrwx--x. 2 boinc boinc        68 Oct  4 20:01 shared
[2024-10-05 03:10:26] -rw-r--r--. 2 boinc boinc    498157 Oct  4 20:01 input.tar.gz
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc      6347 Oct  4 20:01 init_data.xml
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc         0 Oct  4 20:01 boinc_lockfile
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc      2541 Oct  4 20:31 pandaJob.out
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc       424 Oct  4 20:32 setup.sh.local
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc   1024508 Oct  4 20:35 agis_schedconf.cvmfs.json
[2024-10-05 03:10:26] drwx------. 4 boinc boinc      4096 Oct  4 20:35 pilot3
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc 225859629 Oct  5 02:47 HITS.41481139._001914.pool.root.1
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc       531 Oct  5 02:47 boinc_task_state.xml
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc      1012 Oct  5 02:48 memory_monitor_summary.json
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc   1615815 Oct  5 02:48 agis_ddmendpoints.agis.ALL.json
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc    454194 Oct  5 02:48 log.41481139._001914.job.log.tgz.1
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc        95 Oct  5 02:49 pilot_heartbeat.json
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc      7685 Oct  5 02:49 heartbeat.json
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc      4348 Oct  5 02:50 pilotlog.txt
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc   2068148 Oct  5 02:50 log.41481139._001914.job.log.1
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc       357 Oct  5 02:50 output.list
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc       620 Oct  5 02:50 runtime_log
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc   2539520 Oct  5 02:50 result.tar.gz
[2024-10-05 03:10:26] -rw-------. 1 boinc boinc       646 Oct  5 02:50 sQPMDmmtXG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmX0pKDme6Gzhn.diag
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc     10999 Oct  5 02:50 runtime_log.err
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc      8192 Oct  5 03:10 boinc_mmap_file
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc        28 Oct  5 03:10 wrapper_checkpoint.txt
[2024-10-05 03:10:26] -rw-r--r--. 1 boinc boinc     21526 Oct  5 03:10 stderr.txt
[2024-10-05 03:10:26] HITS file was successfully produced:
[2024-10-05 03:10:27] -rw-------. 1 boinc boinc 225859629 Oct  5 02:47 shared/HITS.pool.root.1
[2024-10-05 03:10:27]  *** Contents of shared directory: ***
[2024-10-05 03:10:27] total 798700
[2024-10-05 03:10:27] -rw-r--r--. 2 boinc boinc 588944214 Oct  4 20:01 ATLAS.root_0
[2024-10-05 03:10:27] -rw-r--r--. 2 boinc boinc     17537 Oct  4 20:01 start_atlas.sh
[2024-10-05 03:10:27] -rw-r--r--. 2 boinc boinc    498157 Oct  4 20:01 input.tar.gz
[2024-10-05 03:10:27] -rw-------. 1 boinc boinc 225859629 Oct  5 02:47 HITS.pool.root.1
[2024-10-05 03:10:27] -rw-------. 1 boinc boinc   2539520 Oct  5 02:50 result.tar.gz
03:10:28 (20487): run_atlas exited; CPU time 81237.916202
03:10:28 (20487): called boinc_finish(0)

</stderr_txt>
]]>

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