Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:09:06 (25999): wrapper (7.7.26015): starting
18:09:06 (25999): wrapper: running run_atlas (--nthreads 8)
[2024-10-04 18:09:06] Arguments: --nthreads 8
[2024-10-04 18:09:06] Threads: 8
[2024-10-04 18:09:06] Checking for CVMFS
[2024-10-04 18:09:06] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-04 18:09:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-04 18:09:06] Running cvmfs_config stat atlas.cern.ch
[2024-10-04 18:09:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-04 18:09:07] 2.11.2.0 4866 86246 77472 137975 2 99 15270441 25165824 3795 130560 0 60889082 99.937 30730711 9265 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-04 18:09:07] CVMFS is ok
[2024-10-04 18:09:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-04 18:09:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-04 18:09:07] Further information can be found at the LHC@home message board.
[2024-10-04 18:09:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-04 18:09:07] Checking for apptainer binary...
[2024-10-04 18:09:07] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-04 18:09:07] Running /usr/bin/apptainer --version
[2024-10-04 18:09:07] apptainer version 1.3.2-1.el7
[2024-10-04 18:09:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-04 18:09:08] cg-vwn420.simple-grid.lan
[2024-10-04 18:09:08] apptainer works
[2024-10-04 18:09:08] Set ATHENA_PROC_NUMBER=8
[2024-10-04 18:09:08] Set ATHENA_CORE_NUMBER=8
[2024-10-04 18:09:08] Starting ATLAS job with PandaID=6355130819
[2024-10-04 18:09:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 01:25:28]  *** The last 200 lines of the pilot log: ***
[2024-10-05 01:25:28] 2024-10-04 22:54:53,820 | INFO     | intersect: -17682491834.99455
[2024-10-05 01:25:28] 2024-10-04 22:54:53,820 | INFO     | chi2: 6.130314042172399
[2024-10-05 01:25:28] 2024-10-04 22:54:53,821 | INFO     | model: linear, x: [1728058391.0, 1728058452.0, 1728058513.0, 1728058574.0, 1728058635.0, 1728058696.0, 1728058757.0, 1728058818.0, 1728058879.0, 1728058940.0, 1728
[2024-10-05 01:25:28] 2024-10-04 22:54:53,821 | INFO     | sum of square deviations: 18252584090.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,826 | INFO     | sum of deviations: 218098532580.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,826 | INFO     | mean x: 1728070225.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,826 | INFO     | mean y: 2511376.922879177
[2024-10-05 01:25:28] 2024-10-04 22:54:53,826 | INFO     | -- intersect: -20646048761.702972
[2024-10-05 01:25:28] 2024-10-04 22:54:53,826 | INFO     | intersect: -20646048761.702972
[2024-10-05 01:25:28] 2024-10-04 22:54:53,827 | INFO     | chi2: 5.38195617436051
[2024-10-05 01:25:28] 2024-10-04 22:54:53,827 | INFO     | current chi2=5.38195617436051 (change=12.20749642944383 %)
[2024-10-05 01:25:28] 2024-10-04 22:54:53,827 | INFO     | right removable region: 388
[2024-10-05 01:25:28] 2024-10-04 22:54:53,828 | INFO     | model: linear, x: [1728058696.0, 1728058757.0, 1728058818.0, 1728058879.0, 1728058940.0, 1728059001.0, 1728059062.0, 1728059123.0, 1728059184.0, 1728059245.0, 1728
[2024-10-05 01:25:28] 2024-10-04 22:54:53,828 | INFO     | sum of square deviations: 18252584090.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,832 | INFO     | sum of deviations: 84108083867.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,844 | INFO     | mean x: 1728070530.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,844 | INFO     | mean y: 2529797.146529563
[2024-10-05 01:25:28] 2024-10-04 22:54:53,844 | INFO     | -- intersect: -7960435903.965392
[2024-10-05 01:25:28] 2024-10-04 22:54:53,844 | INFO     | intersect: -7960435903.965392
[2024-10-05 01:25:28] 2024-10-04 22:54:53,845 | INFO     | chi2: 3.1741976485722345
[2024-10-05 01:25:28] 2024-10-04 22:54:53,845 | INFO     | current chi2=3.1741976485722345 (change=48.22128806557202 %)
[2024-10-05 01:25:28] 2024-10-04 22:54:53,845 | INFO     | model: linear, x: [1728059001.0, 1728059062.0, 1728059123.0, 1728059184.0, 1728059245.0, 1728059306.0, 1728059367.0, 1728059428.0, 1728059489.0, 1728059550.0, 1728
[2024-10-05 01:25:28] 2024-10-04 22:54:53,845 | INFO     | sum of square deviations: 17557761760.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,850 | INFO     | sum of deviations: -3721499407.0000267
[2024-10-05 01:25:28] 2024-10-04 22:54:53,850 | INFO     | mean x: 1728070682.5
[2024-10-05 01:25:28] 2024-10-04 22:54:53,850 | INFO     | mean y: 2549074.1041666665
[2024-10-05 01:25:28] 2024-10-04 22:54:53,850 | INFO     | -- intersect: 368826627.4782524
[2024-10-05 01:25:28] 2024-10-04 22:54:53,850 | INFO     | intersect: 368826627.4782524
[2024-10-05 01:25:28] 2024-10-04 22:54:53,851 | INFO     | chi2: 1.4145381831060764
[2024-10-05 01:25:28] 2024-10-04 22:54:53,851 | INFO     | current chi2=1.4145381831060764 (change=55.43635464091719 %)
[2024-10-05 01:25:28] 2024-10-04 22:54:53,852 | INFO     | model: linear, x: [1728059306.0, 1728059367.0, 1728059428.0, 1728059489.0, 1728059550.0, 1728059611.0, 1728059672.0, 1728059733.0, 1728059794.0, 1728059855.0, 1728
[2024-10-05 01:25:28] 2024-10-04 22:54:53,852 | INFO     | sum of square deviations: 16880800230.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,858 | INFO     | sum of deviations: -47152185955.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,858 | INFO     | mean x: 1728070835.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,859 | INFO     | mean y: 2558822.3377308706
[2024-10-05 01:25:28] 2024-10-04 22:54:53,859 | INFO     | -- intersect: 4829481494.553496
[2024-10-05 01:25:28] 2024-10-04 22:54:53,859 | INFO     | intersect: 4829481494.553496
[2024-10-05 01:25:28] 2024-10-04 22:54:53,860 | INFO     | chi2: 0.8573312461778054
[2024-10-05 01:25:28] 2024-10-04 22:54:53,860 | INFO     | current chi2=0.8573312461778054 (change=39.391438391909844 %)
[2024-10-05 01:25:28] 2024-10-04 22:54:53,860 | INFO     | model: linear, x: [1728059611.0, 1728059672.0, 1728059733.0, 1728059794.0, 1728059855.0, 1728059916.0, 1728059977.0, 1728060038.0, 1728060099.0, 1728060160.0, 1728
[2024-10-05 01:25:28] 2024-10-04 22:54:53,861 | INFO     | sum of square deviations: 16221466937.5
[2024-10-05 01:25:28] 2024-10-04 22:54:53,865 | INFO     | sum of deviations: -54826534711.000015
[2024-10-05 01:25:28] 2024-10-04 22:54:53,865 | INFO     | mean x: 1728070987.5
[2024-10-05 01:25:28] 2024-10-04 22:54:53,865 | INFO     | mean y: 2560583.7754010693
[2024-10-05 01:25:28] 2024-10-04 22:54:53,865 | INFO     | -- intersect: 5843224954.284082
[2024-10-05 01:25:28] 2024-10-04 22:54:53,865 | INFO     | intersect: 5843224954.284082
[2024-10-05 01:25:28] 2024-10-04 22:54:53,866 | INFO     | chi2: 0.8208769188426775
[2024-10-05 01:25:28] 2024-10-04 22:54:53,866 | INFO     | current chi2=0.8208769188426775 (change=4.252070305106723 %)
[2024-10-05 01:25:28] 2024-10-04 22:54:53,866 | INFO     | left removable region: 40
[2024-10-05 01:25:28] 2024-10-04 22:54:53,867 | INFO     | model: linear, x: [1728060831.0, 1728060892.0, 1728060953.0, 1728061014.0, 1728061075.0, 1728061136.0, 1728061197.0, 1728061258.0, 1728061319.0, 1728061380.0, 1728
[2024-10-05 01:25:28] 2024-10-04 22:54:53,867 | INFO     | sum of square deviations: 13068103627.0
[2024-10-05 01:25:28] 2024-10-04 22:54:53,872 | INFO     | sum of deviations: -15867226700.499989
[2024-10-05 01:25:28] 2024-10-04 22:54:53,872 | INFO     | mean x: 1728071414.5
[2024-10-05 01:25:28] 2024-10-04 22:54:53,872 | INFO     | mean y: 2563308.209770115
[2024-10-05 01:25:28] 2024-10-04 22:54:53,872 | INFO     | -- intersect: 2100779060.9432697
[2024-10-05 01:25:28] 2024-10-04 22:54:53,872 | INFO     | intersect: 2100779060.9432697
[2024-10-05 01:25:28] 2024-10-04 22:54:53,873 | INFO     | chi2: 0.031850673234656145
[2024-10-05 01:25:28] 2024-10-04 22:54:53,873 | INFO     | -- intersect: 2100779060.9432697
[2024-10-05 01:25:28] 2024-10-04 22:54:53,873 | INFO     | current memory leak: -1.21 B/s (using 348 data points, chi2=0.03)
[2024-10-05 01:25:28] 2024-10-04 22:54:53,874 | INFO     | ..............................
[2024-10-05 01:25:28] 2024-10-04 22:54:53,874 | INFO     | . Timing measurements:
[2024-10-05 01:25:28] 2024-10-04 22:54:53,874 | INFO     | . get job = 0 s
[2024-10-05 01:25:28] 2024-10-04 22:54:53,874 | INFO     | . initial setup = 2 s
[2024-10-05 01:25:28] 2024-10-04 22:54:53,874 | INFO     | . payload setup = 46 s
[2024-10-05 01:25:28] 2024-10-04 22:54:53,874 | INFO     | . stage-in = 0 s
[2024-10-05 01:25:28] 2024-10-04 22:54:53,875 | INFO     | . payload execution = 24076 s
[2024-10-05 01:25:28] 2024-10-04 22:54:53,875 | INFO     | . stage-out = 4 s
[2024-10-05 01:25:28] 2024-10-04 22:54:53,875 | INFO     | . log creation = 2 s
[2024-10-05 01:25:28] 2024-10-04 22:54:53,875 | INFO     | ..............................
[2024-10-05 01:25:28] 2024-10-04 22:54:54,003 | INFO     | 
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | job summary report
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | --------------------------------------------------
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | PanDA job id: 6355130819
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | task id: 41481181
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | errors: (none)
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | pilot state: finished 
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | transexitcode: 0
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | exeerrorcode: 0
[2024-10-05 01:25:28] 2024-10-04 22:54:54,004 | INFO     | exeerrordiag: 
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | exitcode: 0
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | exitmsg: OK
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | cpuconsumptiontime: 90110 s
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | nevents: 400
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | neventsw: 0
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | pid: 5290
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | pgrp: 5290
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | corecount: 8
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | event service: False
[2024-10-05 01:25:28] 2024-10-04 22:54:54,005 | INFO     | sizes: {0: 2435207, 1: 2435462, 2: 2435462, 12: 2435490, 23: 2435518, 27: 2435752, 34: 2435908, 24126: 2470444, 24127: 2470443, 24132: 2479523, 24133: 2479579, 242
[2024-10-05 01:25:28] 2024-10-04 22:54:54,006 | INFO     | --------------------------------------------------
[2024-10-05 01:25:28] 2024-10-04 22:54:54,006 | INFO     | 
[2024-10-05 01:25:28] 2024-10-04 22:54:54,006 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-05 01:25:28] 2024-10-04 22:54:54,262 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,262 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,262 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,262 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,264 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 01:25:28] 2024-10-04 22:54:54,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,264 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 01:25:28] 2024-10-04 22:54:54,264 | INFO     | job 6355130819 has completed (purged errors)
[2024-10-05 01:25:28] 2024-10-04 22:54:54,264 | INFO     | overall cleanup function is called
[2024-10-05 01:25:28] 2024-10-04 22:54:55,273 | INFO     | --- collectZombieJob: --- 10, [5290]
[2024-10-05 01:25:28] 2024-10-04 22:54:55,274 | INFO     | zombie collector waiting for pid 5290
[2024-10-05 01:25:28] 2024-10-04 22:54:55,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 01:25:28] 2024-10-04 22:54:55,274 | INFO     | collected zombie processes
[2024-10-05 01:25:28] 2024-10-04 22:54:55,274 | INFO     | will  attempt to kill all subprocesses of pid=5290
[2024-10-05 01:25:28] 2024-10-04 22:54:55,758 | INFO     | process IDs to be killed: [5290] (in reverse order)
[2024-10-05 01:25:28] 2024-10-04 22:54:56,203 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 01:25:28] 2024-10-04 22:54:56,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 01:25:28] 2024-10-04 22:54:56,206 | INFO     | did not find any defunct processes belonging to 5290
[2024-10-05 01:25:28] 2024-10-04 22:54:56,210 | INFO     | did not find any defunct processes belonging to 5290
[2024-10-05 01:25:28] 2024-10-04 22:54:56,210 | INFO     | ready for new job
[2024-10-05 01:25:28] 2024-10-04 22:54:56,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 01:25:28] 2024-10-04 22:54:56,213 | INFO     | *************************************
[2024-10-05 01:25:28] 2024-10-04 22:54:56,213 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 01:25:28] 2024-10-04 22:54:56,213 | INFO     | *************************************
[2024-10-05 01:25:28] 2024-10-04 22:54:56,213 | INFO     | 
[2024-10-05 01:25:28] 2024-10-04 22:54:56,214 | INFO     | pilot is running in a VM
[2024-10-05 01:25:28] 2024-10-04 22:54:56,214 | INFO     | architecture information:
[2024-10-05 01:25:28] 2024-10-04 22:54:56,220 | INFO     | executing command: cat /etc/os-release
[2024-10-05 01:25:28] 2024-10-04 22:54:56,303 | INFO     | cat /etc/os-release:
[2024-10-05 01:25:28] NAME="CentOS Linux"
[2024-10-05 01:25:28] VERSION="7 (Core)"
[2024-10-05 01:25:28] ID="centos"
[2024-10-05 01:25:28] ID_LIKE="rhel fedora"
[2024-10-05 01:25:28] VERSION_ID="7"
[2024-10-05 01:25:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 01:25:28] ANSI_COLOR="0;31"
[2024-10-05 01:25:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 01:25:28] HOME_URL="https://www.centos.org/"
[2024-10-05 01:25:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 01:25:28] 
[2024-10-05 01:25:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 01:25:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 01:25:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 01:25:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 01:25:28] 
[2024-10-05 01:25:28] 2024-10-04 22:54:56,303 | INFO     | *************************************
[2024-10-05 01:25:28] 2024-10-04 22:54:56,807 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-05 01:25:28] 2024-10-04 22:54:56,901 | INFO     | sufficient remaining disk space (488172945408 B)
[2024-10-05 01:25:28] 2024-10-04 22:54:56,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 01:25:28] 2024-10-04 22:54:56,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 01:25:28] 2024-10-04 22:54:56,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 01:25:28] 2024-10-04 22:54:57,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 01:25:28] 2024-10-04 22:54:57,094 | INFO     | aborting loop
[2024-10-05 01:25:28] 2024-10-04 22:54:57,127 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 01:25:28] 2024-10-04 22:54:57,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 01:25:28] 2024-10-04 22:54:57,128 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 01:25:28] 2024-10-04 22:54:57,559 | INFO     | all data control threads have been joined
[2024-10-05 01:25:28] 2024-10-04 22:54:57,906 | INFO     | all payload control threads have been joined
[2024-10-05 01:25:28] 2024-10-04 22:54:57,908 | INFO     | [job] retrieve thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:57,923 | INFO     | [data] copytool_in thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:58,100 | INFO     | [job] job monitor thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:58,186 | INFO     | all job control threads have been joined
[2024-10-05 01:25:28] 2024-10-04 22:54:58,544 | INFO     | [payload] validate_post thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:58,547 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:58,565 | INFO     | [data] control thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:58,614 | INFO     | [job] validate thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:58,710 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:58,734 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:58,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 01:25:28] 2024-10-04 22:54:58,908 | INFO     | [data] copytool_out thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:58,912 | INFO     | [payload] control thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:59,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 01:25:28] 2024-10-04 22:54:59,145 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:59,192 | INFO     | [job] control thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:54:59,352 | INFO     | [payload] failed_post thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:55:00,023 | INFO     | [job] queue monitor thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:55:02,897 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 01:25:28] 2024-10-04 22:55:03,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329940449088)>', '<ExcThread(monitor, started 140329508390656)>']
[2024-10-05 01:25:28] 2024-10-04 22:55:04,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 01:25:28] 2024-10-04 22:55:04,170 | INFO     | [monitor] control thread has ended
[2024-10-05 01:25:28] 2024-10-04 22:55:08,455 | INFO     | all workflow threads have been joined
[2024-10-05 01:25:28] 2024-10-04 22:55:08,456 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 01:25:28] 2024-10-04 22:55:08,456 | INFO     | traces error code: 0
[2024-10-05 01:25:28] 2024-10-04 22:55:08,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 01:25:28] 2024-10-04 22:55:08,835 [wrapper] ==== pilot stdout END ====
[2024-10-05 01:25:28] 2024-10-04 22:55:08,946 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 01:25:28] 2024-10-04 22:55:09,048 [wrapper] pilotpid: 30109
[2024-10-05 01:25:28] 2024-10-04 22:55:09,158 [wrapper] Pilot exit status: 0
[2024-10-05 01:25:28] 2024-10-04 22:55:09,696 [wrapper] pandaids: 6355130819
[2024-10-05 01:25:28] 2024-10-04 22:55:10,438 [wrapper] cleanup supervisor_pilot 22029 30110
[2024-10-05 01:25:28] 2024-10-04 22:55:10,537 [wrapper] Test setup, not cleaning
[2024-10-05 01:25:28] 2024-10-04 22:55:10,657 [wrapper] ==== wrapper stdout END ====
[2024-10-05 01:25:28] 2024-10-04 22:55:10,768 [wrapper] ==== wrapper stderr END ====
[2024-10-05 01:25:28] 2024-10-04 22:55:10,903 [wrapper] apfmon messages muted
[2024-10-05 01:25:28]  *** Error codes and diagnostics ***
[2024-10-05 01:25:28]     "exeErrorCode": 0,
[2024-10-05 01:25:28]     "exeErrorDiag": "",
[2024-10-05 01:25:28]     "pilotErrorCode": 0,
[2024-10-05 01:25:28]     "pilotErrorDiag": "",
[2024-10-05 01:25:28]  *** Listing of results directory ***
[2024-10-05 01:25:28] total 896140
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc      5653 Oct  3 08:56 queuedata.json
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc    484599 Oct  3 08:56 pilot3.tar.gz
[2024-10-05 01:25:28] -rwx------. 1 boinc boinc     33814 Oct  3 08:57 runpilot2-wrapper.sh
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc       100 Oct  4 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 01:25:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 18:09 run_atlas
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc       105 Oct  4 18:09 job.xml
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc      6346 Oct  4 18:09 init_data.xml
[2024-10-05 01:25:28] -rw-r--r--. 2 boinc boinc 641024611 Oct  4 18:09 EVNT.41466530._000108.pool.root.1
[2024-10-05 01:25:28] -rw-r--r--. 2 boinc boinc     17537 Oct  4 18:09 start_atlas.sh
[2024-10-05 01:25:28] drwxrwx--x. 2 boinc boinc        68 Oct  4 18:09 shared
[2024-10-05 01:25:28] -rw-r--r--. 2 boinc boinc    498166 Oct  4 18:09 input.tar.gz
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc         0 Oct  4 18:09 boinc_lockfile
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc      2535 Oct  4 18:09 pandaJob.out
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc       424 Oct  4 18:09 setup.sh.local
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc   1024566 Oct  4 18:09 agis_schedconf.cvmfs.json
[2024-10-05 01:25:28] drwx------. 4 boinc boinc      4096 Oct  4 18:09 pilot3
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc 267273494 Oct  5 00:51 HITS.41481181._006996.pool.root.1
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc       532 Oct  5 00:52 boinc_task_state.xml
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc      1015 Oct  5 00:53 memory_monitor_summary.json
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc   1615815 Oct  5 00:53 agis_ddmendpoints.agis.ALL.json
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc    485628 Oct  5 00:53 log.41481181._006996.job.log.tgz.1
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc        95 Oct  5 00:54 pilot_heartbeat.json
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc      7687 Oct  5 00:54 heartbeat.json
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc      4274 Oct  5 00:55 pilotlog.txt
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc   2262010 Oct  5 00:55 log.41481181._006996.job.log.1
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc       357 Oct  5 00:55 output.list
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc       620 Oct  5 00:55 runtime_log
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc   2764800 Oct  5 00:55 result.tar.gz
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc     10999 Oct  5 00:55 runtime_log.err
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc       646 Oct  5 00:55 eSsLDmzwUG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmwbpKDm1amDEo.diag
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc      8192 Oct  5 01:25 boinc_mmap_file
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc        28 Oct  5 01:25 wrapper_checkpoint.txt
[2024-10-05 01:25:28] -rw-r--r--. 1 boinc boinc     21509 Oct  5 01:25 stderr.txt
[2024-10-05 01:25:28] HITS file was successfully produced:
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc 267273494 Oct  5 00:51 shared/HITS.pool.root.1
[2024-10-05 01:25:28]  *** Contents of shared directory: ***
[2024-10-05 01:25:28] total 890224
[2024-10-05 01:25:28] -rw-r--r--. 2 boinc boinc 641024611 Oct  4 18:09 ATLAS.root_0
[2024-10-05 01:25:28] -rw-r--r--. 2 boinc boinc     17537 Oct  4 18:09 start_atlas.sh
[2024-10-05 01:25:28] -rw-r--r--. 2 boinc boinc    498166 Oct  4 18:09 input.tar.gz
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc 267273494 Oct  5 00:51 HITS.pool.root.1
[2024-10-05 01:25:28] -rw-------. 1 boinc boinc   2764800 Oct  5 00:55 result.tar.gz
01:25:30 (25999): run_atlas exited; CPU time 90032.935096
01:25:30 (25999): called boinc_finish(0)

</stderr_txt>
]]>

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