Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:56:10 (31962): wrapper (7.7.26015): starting
09:56:10 (31962): wrapper: running run_atlas (--nthreads 8)
[2024-10-04 09:56:10] Arguments: --nthreads 8
[2024-10-04 09:56:10] Threads: 8
[2024-10-04 09:56:10] Checking for CVMFS
[2024-10-04 09:56:11] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-04 09:56:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-04 09:56:11] Running cvmfs_config stat atlas.cern.ch
[2024-10-04 09:56:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-04 09:56:12] 2.11.2.0 5937 85772 71748 137961 2 59 14823198 25165825 4452 130560 0 59028022 99.950 28776407 9329 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-04 09:56:12] CVMFS is ok
[2024-10-04 09:56:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-04 09:56:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-04 09:56:13] Further information can be found at the LHC@home message board.
[2024-10-04 09:56:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-04 09:56:13] Checking for apptainer binary...
[2024-10-04 09:56:13] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-04 09:56:13] Running /usr/bin/apptainer --version
[2024-10-04 09:56:13] apptainer version 1.3.2-1.el7
[2024-10-04 09:56:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-04 09:56:25] cg-vwn289.simple-grid.lan
[2024-10-04 09:56:25] apptainer works
[2024-10-04 09:56:25] Set ATHENA_PROC_NUMBER=8
[2024-10-04 09:56:25] Set ATHENA_CORE_NUMBER=8
[2024-10-04 09:56:25] Starting ATLAS job with PandaID=6355011666
[2024-10-04 09:56:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-04 17:06:06]  *** The last 200 lines of the pilot log: ***
[2024-10-04 17:06:06] 2024-10-04 14:55:51,593 | INFO     | intersect: -23544010054.94445
[2024-10-04 17:06:06] 2024-10-04 14:55:51,594 | INFO     | chi2: 8.119251041429209
[2024-10-04 17:06:06] 2024-10-04 14:55:51,595 | INFO     | model: linear, x: [1728029199.0, 1728029260.0, 1728029321.0, 1728029382.0, 1728029443.0, 1728029504.0, 1728029565.0, 1728029626.0, 1728029687.0, 1728029748.0, 1728
[2024-10-04 17:06:06] 2024-10-04 14:55:51,595 | INFO     | sum of square deviations: 19255784295.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,603 | INFO     | sum of deviations: 296233201145.99994
[2024-10-04 17:06:06] 2024-10-04 14:55:51,607 | INFO     | mean x: 1728041246.5
[2024-10-04 17:06:06] 2024-10-04 14:55:51,607 | INFO     | mean y: 2497969.707070707
[2024-10-04 17:06:06] 2024-10-04 14:55:51,607 | INFO     | -- intersect: -26581887393.185726
[2024-10-04 17:06:06] 2024-10-04 14:55:51,607 | INFO     | intersect: -26581887393.185726
[2024-10-04 17:06:06] 2024-10-04 14:55:51,608 | INFO     | chi2: 7.377647412632276
[2024-10-04 17:06:06] 2024-10-04 14:55:51,608 | INFO     | current chi2=7.377647412632276 (change=9.133892091928592 %)
[2024-10-04 17:06:06] 2024-10-04 14:55:51,608 | INFO     | right removable region: 395
[2024-10-04 17:06:06] 2024-10-04 14:55:51,609 | INFO     | model: linear, x: [1728029504.0, 1728029565.0, 1728029626.0, 1728029687.0, 1728029748.0, 1728029809.0, 1728029870.0, 1728029931.0, 1728029992.0, 1728030053.0, 1728
[2024-10-04 17:06:06] 2024-10-04 14:55:51,609 | INFO     | sum of square deviations: 19255784295.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,617 | INFO     | sum of deviations: 144102811553.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,617 | INFO     | mean x: 1728041551.5
[2024-10-04 17:06:06] 2024-10-04 14:55:51,618 | INFO     | mean y: 2519584.707070707
[2024-10-04 17:06:06] 2024-10-04 14:55:51,618 | INFO     | -- intersect: -12929472290.389816
[2024-10-04 17:06:06] 2024-10-04 14:55:51,618 | INFO     | intersect: -12929472290.389816
[2024-10-04 17:06:06] 2024-10-04 14:55:51,619 | INFO     | chi2: 4.186612752334487
[2024-10-04 17:06:06] 2024-10-04 14:55:51,619 | INFO     | current chi2=4.186612752334487 (change=48.435973577218896 %)
[2024-10-04 17:06:06] 2024-10-04 14:55:51,619 | INFO     | model: linear, x: [1728029809.0, 1728029870.0, 1728029931.0, 1728029992.0, 1728030053.0, 1728030114.0, 1728030175.0, 1728030236.0, 1728030297.0, 1728030358.0, 1728
[2024-10-04 17:06:06] 2024-10-04 14:55:51,623 | INFO     | sum of square deviations: 18535566140.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,631 | INFO     | sum of deviations: 56566460036.99995
[2024-10-04 17:06:06] 2024-10-04 14:55:51,631 | INFO     | mean x: 1728041704.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,632 | INFO     | mean y: 2538124.1202046038
[2024-10-04 17:06:06] 2024-10-04 14:55:51,632 | INFO     | -- intersect: -5271064055.240328
[2024-10-04 17:06:06] 2024-10-04 14:55:51,632 | INFO     | intersect: -5271064055.240328
[2024-10-04 17:06:06] 2024-10-04 14:55:51,632 | INFO     | chi2: 2.464870564494304
[2024-10-04 17:06:06] 2024-10-04 14:55:51,633 | INFO     | current chi2=2.464870564494304 (change=41.1249449063596 %)
[2024-10-04 17:06:06] 2024-10-04 14:55:51,633 | INFO     | model: linear, x: [1728030114.0, 1728030175.0, 1728030236.0, 1728030297.0, 1728030358.0, 1728030419.0, 1728030480.0, 1728030541.0, 1728030602.0, 1728030663.0, 1728
[2024-10-04 17:06:06] 2024-10-04 14:55:51,633 | INFO     | sum of square deviations: 17833534372.5
[2024-10-04 17:06:06] 2024-10-04 14:55:51,641 | INFO     | sum of deviations: -25104364712.500004
[2024-10-04 17:06:06] 2024-10-04 14:55:51,642 | INFO     | mean x: 1728041856.5
[2024-10-04 17:06:06] 2024-10-04 14:55:51,642 | INFO     | mean y: 2555845.914507772
[2024-10-04 17:06:06] 2024-10-04 14:55:51,642 | INFO     | -- intersect: 2435129899.8237195
[2024-10-04 17:06:06] 2024-10-04 14:55:51,642 | INFO     | intersect: 2435129899.8237195
[2024-10-04 17:06:06] 2024-10-04 14:55:51,643 | INFO     | chi2: 0.9270855439693617
[2024-10-04 17:06:06] 2024-10-04 14:55:51,643 | INFO     | current chi2=0.9270855439693617 (change=62.38806380652431 %)
[2024-10-04 17:06:06] 2024-10-04 14:55:51,644 | INFO     | model: linear, x: [1728030419.0, 1728030480.0, 1728030541.0, 1728030602.0, 1728030663.0, 1728030724.0, 1728030785.0, 1728030846.0, 1728030907.0, 1728030968.0, 1728
[2024-10-04 17:06:06] 2024-10-04 14:55:51,644 | INFO     | sum of square deviations: 17149456430.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,649 | INFO     | sum of deviations: -45890705772.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,649 | INFO     | mean x: 1728042009.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,649 | INFO     | mean y: 2560467.1102362205
[2024-10-04 17:06:06] 2024-10-04 14:55:51,649 | INFO     | -- intersect: 4626675973.065942
[2024-10-04 17:06:06] 2024-10-04 14:55:51,649 | INFO     | intersect: 4626675973.065942
[2024-10-04 17:06:06] 2024-10-04 14:55:51,655 | INFO     | chi2: 0.8078507589762488
[2024-10-04 17:06:06] 2024-10-04 14:55:51,656 | INFO     | current chi2=0.8078507589762488 (change=12.861249511302203 %)
[2024-10-04 17:06:06] 2024-10-04 14:55:51,656 | INFO     | left removable region: 40
[2024-10-04 17:06:06] 2024-10-04 14:55:51,656 | INFO     | model: linear, x: [1728031639.0, 1728031700.0, 1728031761.0, 1728031822.0, 1728031883.0, 1728031944.0, 1728032005.0, 1728032066.0, 1728032127.0, 1728032188.0, 1728
[2024-10-04 17:06:06] 2024-10-04 14:55:51,657 | INFO     | sum of square deviations: 13872669410.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,661 | INFO     | sum of deviations: -17659369460.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,661 | INFO     | mean x: 1728042436.0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,661 | INFO     | mean y: 2566038.9549295777
[2024-10-04 17:06:06] 2024-10-04 14:55:51,661 | INFO     | -- intersect: 2202296957.2081313
[2024-10-04 17:06:06] 2024-10-04 14:55:51,670 | INFO     | intersect: 2202296957.2081313
[2024-10-04 17:06:06] 2024-10-04 14:55:51,670 | INFO     | chi2: 0.01974468899985005
[2024-10-04 17:06:06] 2024-10-04 14:55:51,671 | INFO     | -- intersect: 2202296957.2081313
[2024-10-04 17:06:06] 2024-10-04 14:55:51,671 | INFO     | current memory leak: -1.27 B/s (using 355 data points, chi2=0.02)
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | ..............................
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | . Timing measurements:
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | . get job = 0 s
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | . initial setup = 5 s
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | . payload setup = 98 s
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | . stage-in = 0 s
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | . payload execution = 24597 s
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | . stage-out = 4 s
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | . log creation = 2 s
[2024-10-04 17:06:06] 2024-10-04 14:55:51,672 | INFO     | ..............................
[2024-10-04 17:06:06] 2024-10-04 14:55:51,811 | INFO     | 
[2024-10-04 17:06:06] 2024-10-04 14:55:51,811 | INFO     | job summary report
[2024-10-04 17:06:06] 2024-10-04 14:55:51,811 | INFO     | --------------------------------------------------
[2024-10-04 17:06:06] 2024-10-04 14:55:51,811 | INFO     | PanDA job id: 6355011666
[2024-10-04 17:06:06] 2024-10-04 14:55:51,811 | INFO     | task id: 41481181
[2024-10-04 17:06:06] 2024-10-04 14:55:51,811 | INFO     | errors: (none)
[2024-10-04 17:06:06] 2024-10-04 14:55:51,811 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-04 17:06:06] 2024-10-04 14:55:51,811 | INFO     | pilot state: finished 
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | transexitcode: 0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | exeerrorcode: 0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | exeerrordiag: 
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | exitcode: 0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | exitmsg: OK
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | cpuconsumptiontime: 90128 s
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | nevents: 400
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | neventsw: 0
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | pid: 19114
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | pgrp: 19114
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | corecount: 8
[2024-10-04 17:06:06] 2024-10-04 14:55:51,812 | INFO     | event service: False
[2024-10-04 17:06:06] 2024-10-04 14:55:51,813 | INFO     | sizes: {0: 2435261, 1: 2435460, 12: 2435460, 23: 2435488, 34: 2435516, 45: 2435544, 55: 2435700, 66: 2435728, 77: 2435756, 88: 2435812, 91: 2436046, 98: 2436354, 2
[2024-10-04 17:06:06] 2024-10-04 14:55:51,813 | INFO     | --------------------------------------------------
[2024-10-04 17:06:06] 2024-10-04 14:55:51,813 | INFO     | 
[2024-10-04 17:06:06] 2024-10-04 14:55:51,813 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2024-10-04 17:06:06] 2024-10-04 14:55:52,455 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,455 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,455 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,457 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-04 17:06:06] 2024-10-04 14:55:52,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,457 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-04 17:06:06] 2024-10-04 14:55:52,457 | INFO     | job 6355011666 has completed (purged errors)
[2024-10-04 17:06:06] 2024-10-04 14:55:52,457 | INFO     | overall cleanup function is called
[2024-10-04 17:06:06] 2024-10-04 14:55:53,466 | INFO     | --- collectZombieJob: --- 10, [19114]
[2024-10-04 17:06:06] 2024-10-04 14:55:53,466 | INFO     | zombie collector waiting for pid 19114
[2024-10-04 17:06:06] 2024-10-04 14:55:53,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-04 17:06:06] 2024-10-04 14:55:53,466 | INFO     | collected zombie processes
[2024-10-04 17:06:06] 2024-10-04 14:55:53,466 | INFO     | will  attempt to kill all subprocesses of pid=19114
[2024-10-04 17:06:06] 2024-10-04 14:55:53,612 | INFO     | process IDs to be killed: [19114] (in reverse order)
[2024-10-04 17:06:06] 2024-10-04 14:55:53,700 | WARNING  | found no corresponding commands to process id(s)
[2024-10-04 17:06:06] 2024-10-04 14:55:53,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-04 17:06:06] 2024-10-04 14:55:53,704 | INFO     | did not find any defunct processes belonging to 19114
[2024-10-04 17:06:06] 2024-10-04 14:55:53,707 | INFO     | did not find any defunct processes belonging to 19114
[2024-10-04 17:06:06] 2024-10-04 14:55:53,707 | INFO     | ready for new job
[2024-10-04 17:06:06] 2024-10-04 14:55:53,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-04 17:06:06] 2024-10-04 14:55:53,710 | INFO     | *************************************
[2024-10-04 17:06:06] 2024-10-04 14:55:53,710 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-04 17:06:06] 2024-10-04 14:55:53,710 | INFO     | *************************************
[2024-10-04 17:06:06] 2024-10-04 14:55:53,711 | INFO     | 
[2024-10-04 17:06:06] 2024-10-04 14:55:53,711 | INFO     | pilot is running in a VM
[2024-10-04 17:06:06] 2024-10-04 14:55:53,711 | INFO     | architecture information:
[2024-10-04 17:06:06] 2024-10-04 14:55:53,712 | INFO     | executing command: cat /etc/os-release
[2024-10-04 17:06:06] 2024-10-04 14:55:53,902 | INFO     | cat /etc/os-release:
[2024-10-04 17:06:06] NAME="CentOS Linux"
[2024-10-04 17:06:06] VERSION="7 (Core)"
[2024-10-04 17:06:06] ID="centos"
[2024-10-04 17:06:06] ID_LIKE="rhel fedora"
[2024-10-04 17:06:06] VERSION_ID="7"
[2024-10-04 17:06:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-04 17:06:06] ANSI_COLOR="0;31"
[2024-10-04 17:06:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-04 17:06:06] HOME_URL="https://www.centos.org/"
[2024-10-04 17:06:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-04 17:06:06] 
[2024-10-04 17:06:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-04 17:06:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-04 17:06:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-04 17:06:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-04 17:06:06] 
[2024-10-04 17:06:06] 2024-10-04 14:55:53,903 | INFO     | *************************************
[2024-10-04 17:06:06] 2024-10-04 14:55:54,406 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2024-10-04 17:06:06] 2024-10-04 14:55:54,737 | INFO     | sufficient remaining disk space (489927213056 B)
[2024-10-04 17:06:06] 2024-10-04 14:55:54,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-04 17:06:06] 2024-10-04 14:55:54,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-04 17:06:06] 2024-10-04 14:55:54,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-04 17:06:06] 2024-10-04 14:55:54,739 | INFO     | aborting loop
[2024-10-04 17:06:06] 2024-10-04 14:55:55,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-04 17:06:06] 2024-10-04 14:55:55,190 | INFO     | found 0 job(s) in 20 queues
[2024-10-04 17:06:06] 2024-10-04 14:55:55,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-04 17:06:06] 2024-10-04 14:55:55,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-04 17:06:06] 2024-10-04 14:55:55,275 | INFO     | all job control threads have been joined
[2024-10-04 17:06:06] 2024-10-04 14:55:55,629 | INFO     | all data control threads have been joined
[2024-10-04 17:06:06] 2024-10-04 14:55:55,744 | INFO     | [job] retrieve thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:55,745 | INFO     | [job] job monitor thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:55,931 | INFO     | [payload] validate_pre thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:56,046 | INFO     | all payload control threads have been joined
[2024-10-04 17:06:06] 2024-10-04 14:55:56,089 | INFO     | [job] validate thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:56,269 | INFO     | [payload] validate_post thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:56,281 | INFO     | [job] control thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:56,282 | INFO     | [payload] failed_post thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:56,318 | INFO     | [job] create_data_payload thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:56,347 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:56,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-04 17:06:06] 2024-10-04 14:55:56,635 | INFO     | [data] control thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:56,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-04 17:06:06] 2024-10-04 14:55:56,965 | INFO     | [payload] execute_payloads thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:57,013 | INFO     | [data] copytool_out thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:57,052 | INFO     | [payload] control thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:57,208 | INFO     | [data] copytool_in thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:55:57,831 | INFO     | [job] queue monitor thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:56:00,411 | INFO     | [data] queue_monitor thread has finished
[2024-10-04 17:06:06] 2024-10-04 14:56:02,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140565635225408)>', '<ExcThread(monitor, started 140565177935616)>']
[2024-10-04 17:06:06] 2024-10-04 14:56:03,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-04 17:06:06] 2024-10-04 14:56:03,238 | INFO     | [monitor] control thread has ended
[2024-10-04 17:06:06] 2024-10-04 14:56:07,363 | INFO     | all workflow threads have been joined
[2024-10-04 17:06:06] 2024-10-04 14:56:07,363 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-04 17:06:06] 2024-10-04 14:56:07,363 | INFO     | traces error code: 0
[2024-10-04 17:06:06] 2024-10-04 14:56:07,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-04 17:06:06] 2024-10-04 14:56:07,736 [wrapper] ==== pilot stdout END ====
[2024-10-04 17:06:06] 2024-10-04 14:56:07,864 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-04 17:06:06] 2024-10-04 14:56:07,991 [wrapper] pilotpid: 6177
[2024-10-04 17:06:06] 2024-10-04 14:56:08,038 [wrapper] Pilot exit status: 0
[2024-10-04 17:06:06] 2024-10-04 14:56:08,402 [wrapper] pandaids: 6355011666
[2024-10-04 17:06:06] 2024-10-04 14:56:09,295 [wrapper] cleanup supervisor_pilot 17050 6178
[2024-10-04 17:06:06] 2024-10-04 14:56:09,382 [wrapper] Test setup, not cleaning
[2024-10-04 17:06:06] 2024-10-04 14:56:09,433 [wrapper] ==== wrapper stdout END ====
[2024-10-04 17:06:06] 2024-10-04 14:56:09,496 [wrapper] ==== wrapper stderr END ====
[2024-10-04 17:06:06] 2024-10-04 14:56:09,680 [wrapper] apfmon messages muted
[2024-10-04 17:06:06]  *** Error codes and diagnostics ***
[2024-10-04 17:06:06]     "exeErrorCode": 0,
[2024-10-04 17:06:06]     "exeErrorDiag": "",
[2024-10-04 17:06:06]     "pilotErrorCode": 0,
[2024-10-04 17:06:06]     "pilotErrorDiag": "",
[2024-10-04 17:06:06]  *** Listing of results directory ***
[2024-10-04 17:06:06] total 887508
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc    484599 Oct  3 06:23 pilot3.tar.gz
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc      5653 Oct  3 06:26 queuedata.json
[2024-10-04 17:06:06] -rwx------. 1 boinc boinc     33814 Oct  3 06:27 runpilot2-wrapper.sh
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc       100 Oct  4 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-04 17:06:06] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 09:56 run_atlas
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc       105 Oct  4 09:56 job.xml
[2024-10-04 17:06:06] -rw-r--r--. 2 boinc boinc 635258389 Oct  4 09:56 EVNT.41466530._000056.pool.root.1
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc      6345 Oct  4 09:56 init_data.xml
[2024-10-04 17:06:06] -rw-r--r--. 2 boinc boinc     17537 Oct  4 09:56 start_atlas.sh
[2024-10-04 17:06:06] drwxrwx--x. 2 boinc boinc        68 Oct  4 09:56 shared
[2024-10-04 17:06:06] -rw-r--r--. 2 boinc boinc    498174 Oct  4 09:56 input.tar.gz
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc         0 Oct  4 09:56 boinc_lockfile
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc      2533 Oct  4 09:56 pandaJob.out
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc       424 Oct  4 09:56 setup.sh.local
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc   1024512 Oct  4 09:59 agis_schedconf.cvmfs.json
[2024-10-04 17:06:06] drwx------. 4 boinc boinc      4096 Oct  4 09:59 pilot3
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc 264101181 Oct  4 16:52 HITS.41481181._006131.pool.root.1
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc       532 Oct  4 16:53 boinc_task_state.xml
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc      1018 Oct  4 16:54 memory_monitor_summary.json
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc   1615815 Oct  4 16:54 agis_ddmendpoints.agis.ALL.json
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc    481186 Oct  4 16:54 log.41481181._006131.job.log.tgz.1
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc        95 Oct  4 16:55 pilot_heartbeat.json
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc      7693 Oct  4 16:55 heartbeat.json
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc      4274 Oct  4 16:56 pilotlog.txt
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc   2310768 Oct  4 16:56 log.41481181._006131.job.log.1
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc       357 Oct  4 16:56 output.list
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc       620 Oct  4 16:56 runtime_log
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc   2816000 Oct  4 16:56 result.tar.gz
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc     10999 Oct  4 16:56 runtime_log.err
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc       646 Oct  4 16:56 j1lMDmUcSG6n9Rq4apOajLDm4fhM0noT9bVorHsSDmWubKDmOoJUPm.diag
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc      8192 Oct  4 17:06 boinc_mmap_file
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc        28 Oct  4 17:06 wrapper_checkpoint.txt
[2024-10-04 17:06:06] -rw-r--r--. 1 boinc boinc     21516 Oct  4 17:06 stderr.txt
[2024-10-04 17:06:06] HITS file was successfully produced:
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc 264101181 Oct  4 16:52 shared/HITS.pool.root.1
[2024-10-04 17:06:06]  *** Contents of shared directory: ***
[2024-10-04 17:06:06] total 881544
[2024-10-04 17:06:06] -rw-r--r--. 2 boinc boinc 635258389 Oct  4 09:56 ATLAS.root_0
[2024-10-04 17:06:06] -rw-r--r--. 2 boinc boinc     17537 Oct  4 09:56 start_atlas.sh
[2024-10-04 17:06:06] -rw-r--r--. 2 boinc boinc    498174 Oct  4 09:56 input.tar.gz
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc 264101181 Oct  4 16:52 HITS.pool.root.1
[2024-10-04 17:06:06] -rw-------. 1 boinc boinc   2816000 Oct  4 16:56 result.tar.gz
17:06:08 (31962): run_atlas exited; CPU time 90053.398409
17:06:08 (31962): called boinc_finish(0)

</stderr_txt>
]]>

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